Pushing language C Popping language C Pushing language CUDA Popping language CUDA Pushing language Cxx Popping language Cxx Pushing language FC Popping language FC ================================================================================ ================================================================================ Starting Configure Run at Mon Sep 22 11:28:49 2014 Configure Options: --configModules=PETSc.Configure --optionsModule=PETSc.compilerOptions --prefix=pwd --with-mpi=1 --with-cc=tau_cc.sh --with-cxx=mpicxx --with-fc=mpif90 --with-blas-lapack-dir=/home/hills/seska/packages/fblaslapack Working directory: /home/hills/seska-hills/packages/petsc-3.4.2 Machine platform: ('Linux', 'riker', '3.8.0-35-generic', '#50-Ubuntu SMP Tue Dec 3 01:24:59 UTC 2013', 'x86_64', 'x86_64') Python version: 2.7.4 (default, Sep 26 2013, 03:20:26) [GCC 4.7.3] ================================================================================ Pushing language C Popping language C Pushing language CUDA Popping language CUDA Pushing language Cxx Popping language Cxx Pushing language FC Popping language FC ================================================================================ TEST configureExternalPackagesDir from config.framework(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/framework.py:821) TESTING: configureExternalPackagesDir from config.framework(config/BuildSystem/config/framework.py:821) ================================================================================ TEST configureDebuggers from PETSc.utilities.debuggers(/home/hills/seska-hills/packages/petsc-3.4.2/config/PETSc/utilities/debuggers.py:22) TESTING: configureDebuggers from PETSc.utilities.debuggers(config/PETSc/utilities/debuggers.py:22) Find a default debugger and determine its arguments Checking for program /home/hills/seska/packages/pdt/x86_64/bin/gdb...not found Checking for program /home/hills/seska/packages/tau/x86_64/bin/gdb...not found Checking for program /home/hills/seska/packages/petsc/bin/gdb...not found Checking for program /home/hills/seska/packages/petsc/linux-gnu-cxx-opt/bin/gdb...not found Checking for program /home/hills/seska/packages/openmpi/bin/gdb...not found Checking for program /home/hills/bin/gdb...not found Checking for program /home/hills/seska/bin/gdb...not found Checking for program /home/hills/seska/packages/gid/gdb...not found Checking for program /home/hills/seska/packages/petsc/linux-gnu-cxx-opt/bin/gdb...not found Checking for program /usr/lib/lightdm/lightdm/gdb...not found Checking for program /usr/local/sbin/gdb...not found Checking for program /usr/local/bin/gdb...not found Checking for program /usr/sbin/gdb...not found Checking for program /usr/bin/gdb...found Defined make macro "GDB" to "/usr/bin/gdb" Checking for program /home/hills/seska/packages/pdt/x86_64/bin/dbx...not found Checking for program /home/hills/seska/packages/tau/x86_64/bin/dbx...not found Checking for program /home/hills/seska/packages/petsc/bin/dbx...not found Checking for program /home/hills/seska/packages/petsc/linux-gnu-cxx-opt/bin/dbx...not found Checking for program /home/hills/seska/packages/openmpi/bin/dbx...not found Checking for program /home/hills/bin/dbx...not found Checking for program /home/hills/seska/bin/dbx...not found Checking for program /home/hills/seska/packages/gid/dbx...not found Checking for program /home/hills/seska/packages/petsc/linux-gnu-cxx-opt/bin/dbx...not found Checking for program /usr/lib/lightdm/lightdm/dbx...not found Checking for program /usr/local/sbin/dbx...not found Checking for program /usr/local/bin/dbx...not found Checking for program /usr/sbin/dbx...not found Checking for program /usr/bin/dbx...not found Checking for program /sbin/dbx...not found Checking for program /bin/dbx...not found Checking for program /usr/games/dbx...not found Checking for program /usr/local/games/dbx...not found Checking for program /home/hills/dbx...not found Checking for program /home/hills/seska/packages/pdt/x86_64/bin/xdb...not found Checking for program /home/hills/seska/packages/tau/x86_64/bin/xdb...not found Checking for program /home/hills/seska/packages/petsc/bin/xdb...not found Checking for program /home/hills/seska/packages/petsc/linux-gnu-cxx-opt/bin/xdb...not found Checking for program /home/hills/seska/packages/openmpi/bin/xdb...not found Checking for program /home/hills/bin/xdb...not found Checking for program /home/hills/seska/bin/xdb...not found Checking for program /home/hills/seska/packages/gid/xdb...not found Checking for program /home/hills/seska/packages/petsc/linux-gnu-cxx-opt/bin/xdb...not found Checking for program /usr/lib/lightdm/lightdm/xdb...not found Checking for program /usr/local/sbin/xdb...not found Checking for program /usr/local/bin/xdb...not found Checking for program /usr/sbin/xdb...not found Checking for program /usr/bin/xdb...not found Checking for program /sbin/xdb...not found Checking for program /bin/xdb...not found Checking for program /usr/games/xdb...not found Checking for program /usr/local/games/xdb...not found Checking for program /home/hills/xdb...not found Checking for program /home/hills/seska/packages/pdt/x86_64/bin/dsymutil...not found Checking for program /home/hills/seska/packages/tau/x86_64/bin/dsymutil...not found Checking for program /home/hills/seska/packages/petsc/bin/dsymutil...not found Checking for program /home/hills/seska/packages/petsc/linux-gnu-cxx-opt/bin/dsymutil...not found Checking for program /home/hills/seska/packages/openmpi/bin/dsymutil...not found Checking for program /home/hills/bin/dsymutil...not found Checking for program /home/hills/seska/bin/dsymutil...not found Checking for program /home/hills/seska/packages/gid/dsymutil...not found Checking for program /home/hills/seska/packages/petsc/linux-gnu-cxx-opt/bin/dsymutil...not found Checking for program /usr/lib/lightdm/lightdm/dsymutil...not found Checking for program /usr/local/sbin/dsymutil...not found Checking for program /usr/local/bin/dsymutil...not found Checking for program /usr/sbin/dsymutil...not found Checking for program /usr/bin/dsymutil...not found Checking for program /sbin/dsymutil...not found Checking for program /bin/dsymutil...not found Checking for program /usr/games/dsymutil...not found Checking for program /usr/local/games/dsymutil...not found Checking for program /home/hills/dsymutil...not found Defined make macro "DSYMUTIL" to "true" Defined "USE_GDB_DEBUGGER" to "1" ================================================================================ TEST configureCLanguage from PETSc.utilities.languages(/home/hills/seska-hills/packages/petsc-3.4.2/config/PETSc/utilities/languages.py:28) TESTING: configureCLanguage from PETSc.utilities.languages(config/PETSc/utilities/languages.py:28) Choose whether to compile the PETSc library using a C or C++ compiler C language is C Defined "CLANGUAGE_C" to "1" ================================================================================ TEST configureFortranLanguage from PETSc.utilities.languages(/home/hills/seska-hills/packages/petsc-3.4.2/config/PETSc/utilities/languages.py:37) TESTING: configureFortranLanguage from PETSc.utilities.languages(config/PETSc/utilities/languages.py:37) Turn on Fortran bindings Using Fortran ================================================================================ TEST configureMake from config.programs(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/programs.py:24) TESTING: configureMake from config.programs(config/BuildSystem/config/programs.py:24) Check various things about make Checking for program /home/hills/seska/packages/pdt/x86_64/bin/make...not found Checking for program /home/hills/seska/packages/tau/x86_64/bin/make...not found Checking for program /home/hills/seska/packages/petsc/bin/make...not found Checking for program /home/hills/seska/packages/petsc/linux-gnu-cxx-opt/bin/make...not found Checking for program /home/hills/seska/packages/openmpi/bin/make...not found Checking for program /home/hills/bin/make...not found Checking for program /home/hills/seska/bin/make...not found Checking for program /home/hills/seska/packages/gid/make...not found Checking for program /home/hills/seska/packages/petsc/linux-gnu-cxx-opt/bin/make...not found Checking for program /usr/lib/lightdm/lightdm/make...not found Checking for program /usr/local/sbin/make...not found Checking for program /usr/local/bin/make...not found Checking for program /usr/sbin/make...not found Checking for program /usr/bin/make...found Defined make macro "MAKE" to "/usr/bin/make" Checking for program /home/hills/seska/packages/pdt/x86_64/bin/strings...not found Checking for program /home/hills/seska/packages/tau/x86_64/bin/strings...not found Checking for program /home/hills/seska/packages/petsc/bin/strings...not found Checking for program /home/hills/seska/packages/petsc/linux-gnu-cxx-opt/bin/strings...not found Checking for program /home/hills/seska/packages/openmpi/bin/strings...not found Checking for program /home/hills/bin/strings...not found Checking for program /home/hills/seska/bin/strings...not found Checking for program /home/hills/seska/packages/gid/strings...not found Checking for program /home/hills/seska/packages/petsc/linux-gnu-cxx-opt/bin/strings...not found Checking for program /usr/lib/lightdm/lightdm/strings...not found Checking for program /usr/local/sbin/strings...not found Checking for program /usr/local/bin/strings...not found Checking for program /usr/sbin/strings...not found Checking for program /usr/bin/strings...found Defined make macro "STRINGS" to "/usr/bin/strings" sh: /usr/bin/strings /usr/bin/make Executing: /usr/bin/strings /usr/bin/make sh: /lib64/ld-linux-x86-64.so.2 kfUa librt.so.1 __gmon_start__ _Jv_RegisterClasses clock_gettime libc.so.6 fflush strcpy __rawmemchr __printf_chk fnmatch readdir _IO_putc setlocale fopen strsignal strncmp optind strrchr wait pipe __strdup dcgettext closedir sigprocmask __stack_chk_fail __lxstat unlink realloc abort stdin _exit getpid kill __assert_fail mkstemp strtod strtol feof getloadavg fgets getpwnam calloc strlen sigemptyset memset glob strstr __errno_location chdir memcmp dup2 __fprintf_chk sigaddset ctime putenv stdout fputs lseek memcpy fclose malloc remove __strncpy_chk opendir __ctype_b_loc getenv sscanf optarg stderr alarm getlogin readlink setrlimit getopt_long execvp __fxstat __realpath_chk getcwd fwrite fread gettimeofday sigaction waitpid localtime strchr vfork __vfprintf_chk fdopen qsort __strcpy_chk __ctype_tolower_loc setvbuf fcntl __sprintf_chk bsd_signal __xstat getrlimit memmove bindtextdomain opterr strcmp strerror __libc_start_main ferror stpcpy globfree sysconf __environ __cxa_atexit GLIBC_2.2.5 GLIBC_2.3 GLIBC_2.14 GLIBC_2.4 GLIBC_2.3.4 %z`" %r`" %j`" %b`" %Z`" %R`" %J`" %B`" %:`" %2`" %*`" %"`" %z_" %r_" %j_" %b_" %Z_" %R_" %J_" %B_" %:_" %2_" %*_" %"_" %z^" %r^" %j^" %b^" %Z^" %R^" %J^" %B^" %:^" %2^" %*^" %"^" AWAVI AUATSH =3i" $<=u t%< t =Ai" =Ri" =Ui" ;/t) =\m" =ge" =de" =je" =$m" GmXXXXXXL =[c" =Hc" =T\" =*\" =YY" =(Y" =mc" =lZ" tf~, =vU" tmE1 =0V" =;]" %mR" |$0H \$@H fffff. :)t,H t$ H ATU1 []A\ ffffff. AWAVI AUATI t!<[ I<*t]7! D$@H |$HL l$hH T$XH G(L9 |$HH D$HH |$ I D$8I G*f% D$XH D$xH T$xH |$`E D$`D d$XB D$HL \$Pu] |$XH |$hH D$@@ D$@@ L$(H D$XH t$0H L$@H D$hH \$0H \$(H |$ H \$ H D$8H -j!! D$HH D$PH D$HH \$`H l$hL d$pH D$8H d$8H -H)! D$ H %,)! l$`H \$XL d$hL l$pL t$xL D$0t fff. ATE1 []A\ []A\ []A\ ATUSH []A\ T$`H t$XH T$`H t$XH AWAVAUATA T$8H t$0E1 []A\A]A^A_ t$0L |$8I t$0I t$8K t$ H |$(H \$ H \$(H t$(H |$0A \$ H D$0H t$ H |$8L \$ H l$ 1 \$ H D$8H \$ H AUATUH p(Hc @t/H []A\A] []A\A] ffffff. AWAVAUATUSH t$(M L$(D D d$ L$8M |$01 |$LE Oxt( D|$LH |$,H |$0D |$?L A"t$!u T$ T$ E T$ u! |$0D l$8E \$,E ET$, []A\A]A^A_ l$(H L$ M D$ 1 L$,1 AVAUI ATUH H;D$ []A\A]A^A_ H;D$ AWAVAUATUSH l$ H D;55 D$(D []A\A]A^A_ I;EH fffff. fffff. ffff. fffff. fffff. AUATI ,$H9- []A\A] []A\A] ffff. AVE1 AUATUSH HcD$ D;%# []A\A]A^A_ []A\A]A^A_ AWAVAUATUSH T$ H t$ H []A\A]A^A_ []A\A]A^A_ 8[]A\A]A^A_ ffff. d$ L l$(L t$0H AWAVAUATUL T$,D \$ A t$(L D$,A 8[]A\A]A^A_ AWAVAUE1 ATSH dH34%( [A\A]A^A_] AUATUS uB[]A\A]A^ t1L;%Z l$ L t$(L |$0H tjD;C fff. fffff. fff. AWE1 AVE1 ATU1 D$,D L$ L T$,D T$(E 8[]A\A]A^A_ AUATUH []A\A] t2<$u []A\A] fffff. AWAVAUI ATUSH []A\A]A^A_ t$(H t$ L |$ I l$`H \$XL d$hL l$pL t$xL AWAVAUATUSH L;|$ L9|$ []A\A]A^A_ fffff. AWAVAUATUSH t H; []A\A]A^A_ []A\A]A^A_ AWAVI AUATUSH |$@A |$@H |$@H l$@H D$HL |$@I []A\A]A^A_ |$@H 4$E1 t=H9 d$ L l$(L t$0H U0fA u8E1 fffff. AVAUI [A\A]A^] t2E1 fff. D$ H D$*H l$8H \$0L d$@H fff. AUATUS D$ H T$ H []A\A]A^A_ T$ L T$(H T$0H AWAVAUATUSH D$(H D$ H /t{D T$ D D9|$ D$(H 8[]A\A]A^A_ |$ B 8[]A\A]A^A_ l$(E1 L+l$ #tcH H9l$ tr9r(rOAUATUSH []A\A] []A\A] fffff. ATUH ATE1 []A\A] []A\A] t$ H fff. AWAVAUI ATUSH twE1 tcH;5 t2I9 []A\A]A^A_ ffffff. l$ L d$(L l$0L t$8L |$@H H;5Q l$ L d$(L l$0L t$8L |$@H ffffff. []A\A] fff. fff. H;=A D$ A\ fff. H;=Q []A\ fffff. []A\A] ATUSH []A\A]H t`I9 s+f. []A\ l$ L t$(L |$0H touch: attempt to use unsupported feature: `%s' touch: Archive `%s' does not exist touch: `%s' is not a valid archive touch: Member `%s' does not exist in `%s' touch: Bad return code from ar_member_touch on `%s' ! ARFILENAMES/ *** [%s] Archive member `%s' may be bogus; not deleted *** Archive member `%s' may be bogus; not deleted *** [%s] Deleting file `%s' *** Deleting file `%s' unlink: .SUFFIXES $(MAKE) ${MAKE} kill # commands to execute (built-in): (from `%s', line %lu): %.*s $(COMPILE.mod) -o $@ -e $@ $^ .def.sym $(COMPILE.def) -o $@ $< cat $< >$@ chmod a+x $@ .s.o $(COMPILE.s) -o $@ $< .S.o $(COMPILE.S) -o $@ $< .c.o .cc.o .C.o .cpp.o .f.o .p.o .F.o .r.o .mod.o $(COMPILE.mod) -o $@ $< .c.ln $(LINT.c) -C$* $< .y.ln .l.ln .y.c .l.c @$(RM) $@ $(LEX.l) $< > $@ .F.f .r.f .l.r .S.s $(PREPROCESS.S) $< > $@ .texinfo.info .texi.info .txinfo.info .tex.dvi $(TEX) $< .texinfo.dvi .texi.dvi .txinfo.dvi .w.c $(CTANGLE) $< - $@ .web.p $(TANGLE) $< .w.tex $(CWEAVE) $< - $@ .web.tex $(WEAVE) $< $(AR) $(ARFLAGS) $@ $< %.out @rm -f $@ cp $< $@ %.w %.ch $(CTANGLE) $^ $@ %.tex $(CWEAVE) $^ $@ $(CHECKOUT,v) RCS/%,v RCS/% SCCS/s.% ARFLAGS CHECKOUT,v COFLAGS $(CC) -E $(FC) F77FLAGS $(FFLAGS) LINT lint YACC yacc MAKEINFO makeinfo TEXI2DVI texi2dvi CWEAVE cweave CTANGLE ctangle rm -f LINK.o COMPILE.c LINK.c COMPILE.cc COMPILE.C $(COMPILE.cc) COMPILE.cpp LINK.cc LINK.C $(LINK.cc) LINK.cpp YACC.y $(YACC) $(YFLAGS) LEX.l $(LEX) $(LFLAGS) -t COMPILE.f LINK.f COMPILE.F LINK.F COMPILE.r LINK.r COMPILE.def COMPILE.mod COMPILE.p LINK.p LINK.s COMPILE.s LINK.S COMPILE.S PREPROCESS.S $(CC) -E $(CPPFLAGS) PREPROCESS.F PREPROCESS.r LINT.c OUTPUT_OPTION -o $@ .LIBPATTERNS lib%.so lib%.a $(LINK.o) $^ $(LOADLIBES) $(LDLIBS) -o $@ $(LINK.s) $^ $(LOADLIBES) $(LDLIBS) -o $@ $(LINK.S) $^ $(LOADLIBES) $(LDLIBS) -o $@ $(LINK.c) $^ $(LOADLIBES) $(LDLIBS) -o $@ $(LINK.cc) $^ $(LOADLIBES) $(LDLIBS) -o $@ $(LINK.C) $^ $(LOADLIBES) $(LDLIBS) -o $@ $(LINK.cpp) $^ $(LOADLIBES) $(LDLIBS) -o $@ $(LINK.f) $^ $(LOADLIBES) $(LDLIBS) -o $@ $(LINK.p) $^ $(LOADLIBES) $(LDLIBS) -o $@ $(LINK.F) $^ $(LOADLIBES) $(LDLIBS) -o $@ $(LINK.r) $^ $(LOADLIBES) $(LDLIBS) -o $@ $(COMPILE.c) $(OUTPUT_OPTION) $< $(COMPILE.cc) $(OUTPUT_OPTION) $< $(COMPILE.C) $(OUTPUT_OPTION) $< $(COMPILE.cpp) $(OUTPUT_OPTION) $< $(COMPILE.f) $(OUTPUT_OPTION) $< $(COMPILE.p) $(OUTPUT_OPTION) $< $(COMPILE.F) $(OUTPUT_OPTION) $< $(COMPILE.r) $(OUTPUT_OPTION) $< $(YACC.y) $< $(LINT.c) -C$* y.tab.c $(RM) y.tab.c @$(RM) $*.c $(LEX.l) $< > $*.c $(LINT.c) -i $*.c -o $@ $(RM) $*.c $(YACC.y) $< mv -f y.tab.c $@ $(PREPROCESS.F) $(OUTPUT_OPTION) $< $(PREPROCESS.r) $(OUTPUT_OPTION) $< $(LEX.l) $< > $@ mv -f lex.yy.r $@ $(MAKEINFO) $(MAKEINFO_FLAGS) $< -o $@ $(TEXI2DVI) $(TEXI2DVI_FLAGS) $< $(GET) $(GFLAGS) $(SCCS_OUTPUT_OPTION) $< +$(if $(wildcard $@),,$(CO) $(COFLAGS) $< $@) $(CC) $(LDFLAGS) $(TARGET_ARCH) $(CC) $(CFLAGS) $(CPPFLAGS) $(TARGET_ARCH) -c $(CC) $(CFLAGS) $(CPPFLAGS) $(LDFLAGS) $(TARGET_ARCH) $(CXX) $(CXXFLAGS) $(CPPFLAGS) $(TARGET_ARCH) -c $(CXX) $(CXXFLAGS) $(CPPFLAGS) $(LDFLAGS) $(TARGET_ARCH) $(FC) $(FFLAGS) $(TARGET_ARCH) -c $(FC) $(FFLAGS) $(LDFLAGS) $(TARGET_ARCH) $(FC) $(FFLAGS) $(CPPFLAGS) $(TARGET_ARCH) -c $(FC) $(FFLAGS) $(CPPFLAGS) $(LDFLAGS) $(TARGET_ARCH) $(FC) $(FFLAGS) $(RFLAGS) $(TARGET_ARCH) -c $(FC) $(FFLAGS) $(RFLAGS) $(LDFLAGS) $(TARGET_ARCH) $(M2C) $(M2FLAGS) $(DEFFLAGS) $(TARGET_ARCH) $(M2C) $(M2FLAGS) $(MODFLAGS) $(TARGET_ARCH) $(PC) $(PFLAGS) $(CPPFLAGS) $(TARGET_ARCH) -c $(PC) $(PFLAGS) $(CPPFLAGS) $(LDFLAGS) $(TARGET_ARCH) $(CC) $(ASFLAGS) $(LDFLAGS) $(TARGET_MACH) $(AS) $(ASFLAGS) $(TARGET_MACH) $(CC) $(ASFLAGS) $(CPPFLAGS) $(LDFLAGS) $(TARGET_MACH) $(CC) $(ASFLAGS) $(CPPFLAGS) $(TARGET_MACH) -c $(FC) $(FFLAGS) $(CPPFLAGS) $(TARGET_ARCH) -F $(FC) $(FFLAGS) $(RFLAGS) $(TARGET_ARCH) -F $(LINT) $(LINTFLAGS) $(CPPFLAGS) $(TARGET_ARCH) # Directories # %s: could not be stat'd. files, impossibilities so far. # %s (device %ld, inode %ld): could not be opened. # %s (device %ld, inode %ld): impossibilities in %lu directories. Recursive variable `%s' references itself (eventually) unterminated variable reference warning: undefined variable `%.*s' file.c *name != '\0' .PRECIOUS .LOW_RESOLUTION_TIME .PHONY .INTERMEDIATE .SECONDARY .EXPORT_ALL_VARIABLES .IGNORE .SILENT .NOTPARALLEL %04d-%02d-%02d %02d:%02d:%02d .%09d # Not a target: %s:%s | %s # Command-line target. # Also makes: # File does not exist. # File is very old. # Last modified %s # File has been updated. # File has not been updated. # Successfully updated. question_flag # Failed to be updated. Current time # Files # files hash-table stats: Commands were specified for file `%s' at %s:%lu, Commands for file `%s' were found by implicit rule search, but `%s' is now considered the same file as `%s'. Commands for `%s' will be ignored in favor of those for `%s'. can't rename single-colon `%s' to double-colon `%s' can't rename double-colon `%s' to single-colon `%s' *** Deleting intermediate file `%s' Removing intermediate files... # Precious file (prerequisite of .PRECIOUS). # Phony target (prerequisite of .PHONY). # A default, MAKEFILES, or -include/sinclude makefile. # Implicit rule search has been done. # Implicit rule search has not been done. # Implicit/static pattern stem: `%s' # File is an intermediate prerequisite. # Modification time never checked. # Commands currently running (THIS IS A BUG). # Dependencies commands running (THIS IS A BUG). # Needs to be updated (-q is set). # Invalid value in `update_status' member! %s: Timestamp out of range; substituting %s lookup_file enter_file print_file undefined default environment environment override command line automatic basename addprefix %s:%lu: recursive simple filter %s: '%s' abspath addsuffix notdir filter-out findstring firstword flavor join lastword patsubst realpath shell sort strip wildcard wordlist words origin foreach call warning value eval Internal error: func_error: '%s' Cleaning up temporary batch file %s insufficient number of arguments (%d) to function `%s' unimplemented on this platform: function `%s' non-numeric first argument to `wordlist' function non-numeric second argument to `wordlist' function invalid first argument to `wordlist' function: `%d' non-numeric first argument to `word' function first argument to `word' function must be greater than 0 unterminated call to function `%s': missing `%c' Avoiding implicit rule recursion. Trying pattern rule with stem `%.*s'. Rejecting impossible implicit prerequisite `%s'. Rejecting impossible rule prerequisite `%s'. Trying implicit prerequisite `%s'. Trying rule prerequisite `%s'. Found prerequisite `%s' as VPATH `%s' Looking for a rule with intermediate file `%s'. Looking for an implicit rule for `%s'. Looking for archive-member implicit rule for `%s'. INTERNAL: Freeing child 0x%08lx (%s) but no tokens left! Released token for child 0x%08lx (%s). %s (line %d) Bad shell context (!unixy && !batch_mode_shell) cannot enforce load limits on this operating system Estimated system load = %f (actual = %f) (max requested = %f) Putting child 0x%08lx (%s) PID %ld%s on the chain. f->command_state == cs_finished *** Waiting for unfinished jobs.... Live child 0x%08lx (%s) PID %ld %s Reaping losing child 0x%08lx PID %ld %s Reaping winning child 0x%08lx PID %ld %s Cleaning up temp batch file %s Removing child 0x%08lx PID %ld%s from chain. Need a job token; we %shave children INTERNAL: no children as we go to sleep on read Obtained token for child 0x%08lx (%s). write jobserver job.c ap <= end \$\{%u\} [%s] Error %d (ignored) *** [%s] Error %d (core dumped) *** [%s] %s%s %s: Command not found SHELL %s: Shell program not found execvp: $(SHELL) $(IFS) /bin/sh vfork cannot enforce load limit: getloadavg (remote) remote_status wait .DELETE_ON_ERROR don't Duplicate the job FD read jobs pipe Read returned EBADF. break case continue exec exit login logout read readonly shift switch test trap umask while start_waiting_job construct_command_argv_internal %sThis program built for %s write MAKECMDGOALS MFLAGS MAKEFLAGS %s: Entering directory `%s' %s: Leaving directory `%s' This program built for %s /tmp /usr/share/locale getcwd .VARIABLES .FEATURES archives check-symlink MAKE_RESTARTS MAKE_COMMAND $(MAKE_COMMAND) MAKE -*-command-variables-*- ${-*-command-variables-*-} MAKEOVERRIDES MAKELEVEL CURDIR TMPDIR fopen (temporary file) fwrite (temporary file) .DEFAULT .DEFAULT_GOAL %d,%d dup jobserver creating jobs pipe init jobserver pipe Updating makefiles.... Makefile `%s' was not found chdir Re-executing[%u]: %s=%u MAKE_RESTARTS= MAKE_RESTARTS=%u main.c unlink (temporary file): No targets Updating goal targets.... always-make basic debug environment-overrides help ignore-errors include-dir jobs jobserver-fds load-average check-symlink-times just-print old-file print-data-base question no-builtin-rules no-builtin-variables silent no-keep-going touch version no-print-directory what-if warn-undefined-variables quiet stop new-file assume-new assume-old max-load dry-run recon Options: %sGNU Make %s %sCopyright (C) 2006 Free Software Foundation, Inc. %sThis is free software; see the source for copying conditions. %sThere is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A %sPARTICULAR PURPOSE. %sThis program built for %s (%s) # Make data base, printed on %s # Finished Make data base on %s INTERNAL: Exiting with %u jobserver tokens (should be 0)! INTERNAL: Exiting with %u jobserver tokens available; should be %u! empty string invalid as file name %s: Entering an unknown directory %s: Leaving an unknown directory %s[%u]: Entering an unknown directory %s[%u]: Leaving an unknown directory %s[%u]: Entering directory `%s' %s[%u]: Leaving directory `%s' the `-%c' option requires a non-empty string argument the `-%c' option requires a positive integral argument Usage: %s [options] [target] ... This program built for %s (%s) Report bugs to target-specific order-only second-expansion else-if unknown debug level specification `%s' Makefile from standard input specified twice. internal error: multiple --jobserver-fds options internal error: invalid --jobserver-fds string `%s' warning: -jN forced in submake: disabling jobserver mode. warning: jobserver unavailable: using -j1. Add `+' to parent make rule. Makefile `%s' might loop; not remaking it. Failed to remake makefile `%s'. Included makefile `%s' was not found. .DEFAULT_GOAL contains more than one target No targets specified and no makefile found warning: Clock skew detected. Your build may be incomplete. Couldn't change back to original directory. -b, -m Ignored for compatibility. -B, --always-make Unconditionally make all targets. -C DIRECTORY, --directory=DIRECTORY Change to DIRECTORY before doing anything. -d Print lots of debugging information. --debug[=FLAGS] Print various types of debugging information. -e, --environment-overrides Environment variables override makefiles. -f FILE, --file=FILE, --makefile=FILE Read FILE as a makefile. -h, --help Print this message and exit. -i, --ignore-errors Ignore errors from commands. -I DIRECTORY, --include-dir=DIRECTORY Search DIRECTORY for included makefiles. -j [N], --jobs[=N] Allow N jobs at once; infinite jobs with no arg. -k, --keep-going Keep going when some targets can't be made. -l [N], --load-average[=N], --max-load[=N] Don't start multiple jobs unless load is below N. -L, --check-symlink-times Use the latest mtime between symlinks and target. -n, --just-print, --dry-run, --recon Don't actually run any commands; just print them. -o FILE, --old-file=FILE, --assume-old=FILE Consider FILE to be very old and don't remake it. -p, --print-data-base Print make's internal database. -q, --question Run no commands; exit status says if up to date. -r, --no-builtin-rules Disable the built-in implicit rules. -R, --no-builtin-variables Disable the built-in variable settings. -s, --silent, --quiet Don't echo commands. -S, --no-keep-going, --stop Turns off -k. -t, --touch Touch targets instead of remaking them. -v, --version Print the version number of make and exit. -w, --print-directory Print the current directory. --no-print-directory Turn off -w, even if it was turned on implicitly. -W FILE, --what-if=FILE, --new-file=FILE, --assume-new=FILE Consider FILE to be infinitely new. --warn-undefined-variables Warn when an undefined variable is referenced. main $(-*-command-variables-*-) %s: %s[%u]: %s:%lu: *** %s: *** %s[%u]: *** . Stop. %s%s: %s virtual memory exhausted write error: %s write error warning: NUL character seen; rest of line ignored Extraneous text after `endef' directive missing `endef', unterminated `define' Extraneous text after `%s' directive only one `else' per conditional prerequisites cannot be defined in command scripts mixed implicit and static pattern rules mixed implicit and normal rules target `%s' doesn't match the target pattern target file `%s' has both : and :: entries target `%s' given more than once in the same rule. warning: overriding commands for target `%s' warning: ignoring old commands for target `%s' commands commence before first target (did you mean TAB instead of 8 spaces?) Malformed target-specific variable definition target pattern contains no `%%' define endef ifdef ifndef ifeq ifneq else endif extraneous `%s' .POSIX .SECONDEXPANSION $(HOME) HOME /usr/include .INCLUDE_DIRS invalid syntax in conditional extraneous `endef' empty variable name empty `override' directive invalid `override' directive unexport vpath -include sinclude missing rule before commands missing separator%s read.c *p2 != '\0' v != 0 missing target pattern multiple target patterns missing `endif' Reading makefile `%s' (no default goal) (search path) (don't care) (no ~ expansion) MAKEFILE_LIST Reading makefiles... $(MAKEFILES) GNUmakefile Makefile /usr/gnu/include /usr/local/include eval record_target_var lstat: readlink: $(strip $(.LIBPATTERNS)) %s/%s touch %s touch: open: touch: fstat: touch: read: touch: lseek: touch: write: Pruning file `%s'. Still updating file `%s'. Finished updating file `%s'. File `%s' does not exist. No need to remake target `%s' ; using VPATH name `%s' Must remake target `%s'. Ignoring VPATH name `%s'. remake.c Nothing to be done for `%s'. `%s' is up to date. /usr/lib/x86_64-linux-gnu /usr/lib /usr/local/lib %sNo rule to make target `%s'%s %sNo rule to make target `%s', needed by `%s'%s .LIBPATTERNS element `%s' is not a pattern Warning: File `%s' has modification time %.2g s in the future Considering target file `%s'. Recently tried and failed to update file `%s'. File `%s' was considered already. *** Warning: .LOW_RESOLUTION_TIME file `%s' has a high resolution time stamp Found an implicit rule for `%s'. No implicit rule found for `%s'. Using default commands for `%s'. Circular %s <- %s dependency dropped. Finished prerequisites of target file `%s'. The prerequisites of `%s' are being made. Giving up on target file `%s'. Target `%s' not remade because of errors. Prerequisite `%s' is order-only for target `%s'. Prerequisite `%s' of target `%s' does not exist. Prerequisite `%s' is newer than target `%s'. Prerequisite `%s' is older than target `%s'. Target `%s' is double-colon and has no prerequisites. No commands for `%s' and no prerequisites actually changed. Making `%s' due to always-make flag. Commands of `%s' are being run. Failed to remake target file `%s'. Successfully remade target file `%s'. Target file `%s' needs remade under -q. file->update_status >= 0 && file->update_status <= 2 update_file_1 A(%.o) # Implicit Rules # No implicit rules. # %u implicit rules, %u (%.1f%%) terminal. BUG: num_pattern_rules wrong! %u != %u Y@strcache.c best->bytesfree > len %s # of strcache buffers: %d %s # of strings in strcache: %d %s strcache size: total = %d / max = %d / min = %d / avg = %d %s strcache free: total = %d / max = %d / min = %d / avg = %d add_string environment under -e (from `%s', line %lu) define %s endef %s %s= $(subst ,,%s) variable.c %s%s%s MAKE_VERSION MAKEFILES $(patsubst %/,%,$(dir $@)) $(patsubst %/,%,$(dir $%)) $(patsubst %/,%,$(dir $*)) $(patsubst %/,%,$(dir $<)) $(patsubst %/,%,$(dir $?)) $(patsubst %/,%,$(dir $^)) $(patsubst %/,%,$(dir $+)) $(notdir $@) $(notdir $%) $(notdir $*) $(notdir $<) $(notdir $?) $(notdir $^) $(notdir $+) # Variables %s : pop_variable_scope current_variable_set_list->next != ((void *)0) # variable set hash-table stats: # Pattern-specific Variable Values # No pattern-specific variable values. # %u pattern-specific variable values x86_64-pc-linux-gnu 3.81 $(strip $(VPATH)) $(strip $(GPATH)) # VPATH Search Paths # No `vpath' search paths. vpath %s %s%c # %u `vpath' search paths. # No general (`VPATH' variable) search path. # General (`VPATH' variable) search path: can't allocate %ld bytes for hash table: memory exhausted Load=%ld/%ld=%.0f%%, Rehash=%d, Collisions=%ld/%ld=%.0f%% ;*3$" .out .a .ln .o .c .cc .C .cpp .p .f .F .r .y .l .s .S .mod .sym .def .h .info .dvi .tex .texinfo .texi .txinfo .w .ch .web .sh .elc .el /bin/sh #;"*?[]&|<>(){}$`^~! -c eval\ \"set\ x\;\ shift\;\ Defined make macro "OMAKE " to "/usr/bin/make --no-print-directory" Defined make rule "libc" with dependencies "${LIBNAME}(${OBJSC})" and code [] Defined make rule "libcu" with dependencies "${LIBNAME}(${OBJSCU})" and code [] Defined make rule "libf" with dependencies "${OBJSF}" and code -${AR} ${AR_FLAGS} ${LIBNAME} ${OBJSF} module multiprocessing found 8 cores: using make_np = 5 Defined make macro "MAKE_NP" to "5" ================================================================================ TEST configureMkdir from config.programs(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/programs.py:111) TESTING: configureMkdir from config.programs(config/BuildSystem/config/programs.py:111) Make sure we can have mkdir automatically make intermediate directories Checking for program /home/hills/seska/packages/pdt/x86_64/bin/mkdir...not found Checking for program /home/hills/seska/packages/tau/x86_64/bin/mkdir...not found Checking for program /home/hills/seska/packages/petsc/bin/mkdir...not found Checking for program /home/hills/seska/packages/petsc/linux-gnu-cxx-opt/bin/mkdir...not found Checking for program /home/hills/seska/packages/openmpi/bin/mkdir...not found Checking for program /home/hills/bin/mkdir...not found Checking for program /home/hills/seska/bin/mkdir...not found Checking for program /home/hills/seska/packages/gid/mkdir...not found Checking for program /home/hills/seska/packages/petsc/linux-gnu-cxx-opt/bin/mkdir...not found Checking for program /usr/lib/lightdm/lightdm/mkdir...not found Checking for program /usr/local/sbin/mkdir...not found Checking for program /usr/local/bin/mkdir...not found Checking for program /usr/sbin/mkdir...not found Checking for program /usr/bin/mkdir...not found Checking for program /sbin/mkdir...not found Checking for program /bin/mkdir...found sh: /bin/mkdir -p .conftest/tmp Executing: /bin/mkdir -p .conftest/tmp sh: Adding -p flag to /bin/mkdir -p to automatically create directories Defined make macro "MKDIR" to "/bin/mkdir -p" ================================================================================ TEST configurePrograms from config.programs(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/programs.py:133) TESTING: configurePrograms from config.programs(config/BuildSystem/config/programs.py:133) Check for the programs needed to build and run PETSc Checking for program /home/hills/seska/packages/pdt/x86_64/bin/sh...not found Checking for program /home/hills/seska/packages/tau/x86_64/bin/sh...not found Checking for program /home/hills/seska/packages/petsc/bin/sh...not found Checking for program /home/hills/seska/packages/petsc/linux-gnu-cxx-opt/bin/sh...not found Checking for program /home/hills/seska/packages/openmpi/bin/sh...not found Checking for program /home/hills/bin/sh...not found Checking for program /home/hills/seska/bin/sh...not found Checking for program /home/hills/seska/packages/gid/sh...not found Checking for program /home/hills/seska/packages/petsc/linux-gnu-cxx-opt/bin/sh...not found Checking for program /usr/lib/lightdm/lightdm/sh...not found Checking for program /usr/local/sbin/sh...not found Checking for program /usr/local/bin/sh...not found Checking for program /usr/sbin/sh...not found Checking for program /usr/bin/sh...not found Checking for program /sbin/sh...not found Checking for program /bin/sh...found Defined make macro "SHELL" to "/bin/sh" Checking for program /home/hills/seska/packages/pdt/x86_64/bin/sed...not found Checking for program /home/hills/seska/packages/tau/x86_64/bin/sed...not found Checking for program /home/hills/seska/packages/petsc/bin/sed...not found Checking for program /home/hills/seska/packages/petsc/linux-gnu-cxx-opt/bin/sed...not found Checking for program /home/hills/seska/packages/openmpi/bin/sed...not found Checking for program /home/hills/bin/sed...not found Checking for program /home/hills/seska/bin/sed...not found Checking for program /home/hills/seska/packages/gid/sed...not found Checking for program /home/hills/seska/packages/petsc/linux-gnu-cxx-opt/bin/sed...not found Checking for program /usr/lib/lightdm/lightdm/sed...not found Checking for program /usr/local/sbin/sed...not found Checking for program /usr/local/bin/sed...not found Checking for program /usr/sbin/sed...not found Checking for program /usr/bin/sed...not found Checking for program /sbin/sed...not found Checking for program /bin/sed...found Defined make macro "SED" to "/bin/sed" All intermediate test results are stored in /tmp/petsc-U9YCMv All intermediate test results are stored in /tmp/petsc-U9YCMv/config.programs sh: /bin/sed -i s/sed/sd/g "/tmp/petsc-U9YCMv/config.programs/sed1" Executing: /bin/sed -i s/sed/sd/g "/tmp/petsc-U9YCMv/config.programs/sed1" sh: Adding SEDINPLACE cmd: /bin/sed -i Defined make macro "SEDINPLACE" to "/bin/sed -i" Checking for program /home/hills/seska/packages/pdt/x86_64/bin/mv...not found Checking for program /home/hills/seska/packages/tau/x86_64/bin/mv...not found Checking for program /home/hills/seska/packages/petsc/bin/mv...not found Checking for program /home/hills/seska/packages/petsc/linux-gnu-cxx-opt/bin/mv...not found Checking for program /home/hills/seska/packages/openmpi/bin/mv...not found Checking for program /home/hills/bin/mv...not found Checking for program /home/hills/seska/bin/mv...not found Checking for program /home/hills/seska/packages/gid/mv...not found Checking for program /home/hills/seska/packages/petsc/linux-gnu-cxx-opt/bin/mv...not found Checking for program /usr/lib/lightdm/lightdm/mv...not found Checking for program /usr/local/sbin/mv...not found Checking for program /usr/local/bin/mv...not found Checking for program /usr/sbin/mv...not found Checking for program /usr/bin/mv...not found Checking for program /sbin/mv...not found Checking for program /bin/mv...found Defined make macro "MV" to "/bin/mv" Checking for program /home/hills/seska/packages/pdt/x86_64/bin/cp...not found Checking for program /home/hills/seska/packages/tau/x86_64/bin/cp...not found Checking for program /home/hills/seska/packages/petsc/bin/cp...not found Checking for program /home/hills/seska/packages/petsc/linux-gnu-cxx-opt/bin/cp...not found Checking for program /home/hills/seska/packages/openmpi/bin/cp...not found Checking for program /home/hills/bin/cp...not found Checking for program /home/hills/seska/bin/cp...not found Checking for program /home/hills/seska/packages/gid/cp...not found Checking for program /home/hills/seska/packages/petsc/linux-gnu-cxx-opt/bin/cp...not found Checking for program /usr/lib/lightdm/lightdm/cp...not found Checking for program /usr/local/sbin/cp...not found Checking for program /usr/local/bin/cp...not found Checking for program /usr/sbin/cp...not found Checking for program /usr/bin/cp...not found Checking for program /sbin/cp...not found Checking for program /bin/cp...found Defined make macro "CP" to "/bin/cp" Checking for program /home/hills/seska/packages/pdt/x86_64/bin/grep...not found Checking for program /home/hills/seska/packages/tau/x86_64/bin/grep...not found Checking for program /home/hills/seska/packages/petsc/bin/grep...not found Checking for program /home/hills/seska/packages/petsc/linux-gnu-cxx-opt/bin/grep...not found Checking for program /home/hills/seska/packages/openmpi/bin/grep...not found Checking for program /home/hills/bin/grep...not found Checking for program /home/hills/seska/bin/grep...not found Checking for program /home/hills/seska/packages/gid/grep...not found Checking for program /home/hills/seska/packages/petsc/linux-gnu-cxx-opt/bin/grep...not found Checking for program /usr/lib/lightdm/lightdm/grep...not found Checking for program /usr/local/sbin/grep...not found Checking for program /usr/local/bin/grep...not found Checking for program /usr/sbin/grep...not found Checking for program /usr/bin/grep...not found Checking for program /sbin/grep...not found Checking for program /bin/grep...found Defined make macro "GREP" to "/bin/grep" Checking for program /home/hills/seska/packages/pdt/x86_64/bin/rm...not found Checking for program /home/hills/seska/packages/tau/x86_64/bin/rm...not found Checking for program /home/hills/seska/packages/petsc/bin/rm...not found Checking for program /home/hills/seska/packages/petsc/linux-gnu-cxx-opt/bin/rm...not found Checking for program /home/hills/seska/packages/openmpi/bin/rm...not found Checking for program /home/hills/bin/rm...not found Checking for program /home/hills/seska/bin/rm...not found Checking for program /home/hills/seska/packages/gid/rm...not found Checking for program /home/hills/seska/packages/petsc/linux-gnu-cxx-opt/bin/rm...not found Checking for program /usr/lib/lightdm/lightdm/rm...not found Checking for program /usr/local/sbin/rm...not found Checking for program /usr/local/bin/rm...not found Checking for program /usr/sbin/rm...not found Checking for program /usr/bin/rm...not found Checking for program /sbin/rm...not found Checking for program /bin/rm...found Defined make macro "RM" to "/bin/rm -f" Checking for program /home/hills/seska/packages/pdt/x86_64/bin/diff...not found Checking for program /home/hills/seska/packages/tau/x86_64/bin/diff...not found Checking for program /home/hills/seska/packages/petsc/bin/diff...not found Checking for program /home/hills/seska/packages/petsc/linux-gnu-cxx-opt/bin/diff...not found Checking for program /home/hills/seska/packages/openmpi/bin/diff...not found Checking for program /home/hills/bin/diff...not found Checking for program /home/hills/seska/bin/diff...not found Checking for program /home/hills/seska/packages/gid/diff...not found Checking for program /home/hills/seska/packages/petsc/linux-gnu-cxx-opt/bin/diff...not found Checking for program /usr/lib/lightdm/lightdm/diff...not found Checking for program /usr/local/sbin/diff...not found Checking for program /usr/local/bin/diff...not found Checking for program /usr/sbin/diff...not found Checking for program /usr/bin/diff...found sh: "/usr/bin/diff" -w "/tmp/petsc-U9YCMv/config.programs/diff1" "/tmp/petsc-U9YCMv/config.programs/diff2" Executing: "/usr/bin/diff" -w "/tmp/petsc-U9YCMv/config.programs/diff1" "/tmp/petsc-U9YCMv/config.programs/diff2" sh: Defined make macro "DIFF" to "/usr/bin/diff -w" Checking for program /usr/ucb/ps...not found Checking for program /usr/usb/ps...not found Checking for program /home/hills/ps...not found Checking for program /home/hills/seska/packages/pdt/x86_64/bin/gzip...not found Checking for program /home/hills/seska/packages/tau/x86_64/bin/gzip...not found Checking for program /home/hills/seska/packages/petsc/bin/gzip...not found Checking for program /home/hills/seska/packages/petsc/linux-gnu-cxx-opt/bin/gzip...not found Checking for program /home/hills/seska/packages/openmpi/bin/gzip...not found Checking for program /home/hills/bin/gzip...not found Checking for program /home/hills/seska/bin/gzip...not found Checking for program /home/hills/seska/packages/gid/gzip...not found Checking for program /home/hills/seska/packages/petsc/linux-gnu-cxx-opt/bin/gzip...not found Checking for program /usr/lib/lightdm/lightdm/gzip...not found Checking for program /usr/local/sbin/gzip...not found Checking for program /usr/local/bin/gzip...not found Checking for program /usr/sbin/gzip...not found Checking for program /usr/bin/gzip...not found Checking for program /sbin/gzip...not found Checking for program /bin/gzip...found Defined make macro "GZIP" to "/bin/gzip" Defined "HAVE_GZIP" to "1" Defined make macro "PYTHON" to "/usr/bin/python" ================================================================================ TEST configureGit from config.sourceControl(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/sourceControl.py:24) TESTING: configureGit from config.sourceControl(config/BuildSystem/config/sourceControl.py:24) Find the Git executable Checking for program /home/hills/seska/packages/pdt/x86_64/bin/git...not found Checking for program /home/hills/seska/packages/tau/x86_64/bin/git...not found Checking for program /home/hills/seska/packages/petsc/bin/git...not found Checking for program /home/hills/seska/packages/petsc/linux-gnu-cxx-opt/bin/git...not found Checking for program /home/hills/seska/packages/openmpi/bin/git...not found Checking for program /home/hills/bin/git...not found Checking for program /home/hills/seska/bin/git...not found Checking for program /home/hills/seska/packages/gid/git...not found Checking for program /home/hills/seska/packages/petsc/linux-gnu-cxx-opt/bin/git...not found Checking for program /usr/lib/lightdm/lightdm/git...not found Checking for program /usr/local/sbin/git...not found Checking for program /usr/local/bin/git...not found Checking for program /usr/sbin/git...not found Checking for program /usr/bin/git...not found Checking for program /sbin/git...not found Checking for program /bin/git...not found Checking for program /usr/games/git...not found Checking for program /usr/local/games/git...not found Checking for program /home/hills/git...not found ================================================================================ TEST configureMercurial from config.sourceControl(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/sourceControl.py:35) TESTING: configureMercurial from config.sourceControl(config/BuildSystem/config/sourceControl.py:35) Find the Mercurial executable Checking for program /home/hills/seska/packages/pdt/x86_64/bin/hg...not found Checking for program /home/hills/seska/packages/tau/x86_64/bin/hg...not found Checking for program /home/hills/seska/packages/petsc/bin/hg...not found Checking for program /home/hills/seska/packages/petsc/linux-gnu-cxx-opt/bin/hg...not found Checking for program /home/hills/seska/packages/openmpi/bin/hg...not found Checking for program /home/hills/bin/hg...not found Checking for program /home/hills/seska/bin/hg...not found Checking for program /home/hills/seska/packages/gid/hg...not found Checking for program /home/hills/seska/packages/petsc/linux-gnu-cxx-opt/bin/hg...not found Checking for program /usr/lib/lightdm/lightdm/hg...not found Checking for program /usr/local/sbin/hg...not found Checking for program /usr/local/bin/hg...not found Checking for program /usr/sbin/hg...not found Checking for program /usr/bin/hg...not found Checking for program /sbin/hg...not found Checking for program /bin/hg...not found Checking for program /usr/games/hg...not found Checking for program /usr/local/games/hg...not found Checking for program /home/hills/hg...not found ================================================================================ TEST configureCVS from config.sourceControl(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/sourceControl.py:46) TESTING: configureCVS from config.sourceControl(config/BuildSystem/config/sourceControl.py:46) Find the CVS executable Checking for program /home/hills/seska/packages/pdt/x86_64/bin/cvs...not found Checking for program /home/hills/seska/packages/tau/x86_64/bin/cvs...not found Checking for program /home/hills/seska/packages/petsc/bin/cvs...not found Checking for program /home/hills/seska/packages/petsc/linux-gnu-cxx-opt/bin/cvs...not found Checking for program /home/hills/seska/packages/openmpi/bin/cvs...not found Checking for program /home/hills/bin/cvs...not found Checking for program /home/hills/seska/bin/cvs...not found Checking for program /home/hills/seska/packages/gid/cvs...not found Checking for program /home/hills/seska/packages/petsc/linux-gnu-cxx-opt/bin/cvs...not found Checking for program /usr/lib/lightdm/lightdm/cvs...not found Checking for program /usr/local/sbin/cvs...not found Checking for program /usr/local/bin/cvs...not found Checking for program /usr/sbin/cvs...not found Checking for program /usr/bin/cvs...not found Checking for program /sbin/cvs...not found Checking for program /bin/cvs...not found Checking for program /usr/games/cvs...not found Checking for program /usr/local/games/cvs...not found Checking for program /home/hills/cvs...not found ================================================================================ TEST configureSubversion from config.sourceControl(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/sourceControl.py:55) TESTING: configureSubversion from config.sourceControl(config/BuildSystem/config/sourceControl.py:55) Find the Subversion executable Checking for program /home/hills/seska/packages/pdt/x86_64/bin/svn...not found Checking for program /home/hills/seska/packages/tau/x86_64/bin/svn...not found Checking for program /home/hills/seska/packages/petsc/bin/svn...not found Checking for program /home/hills/seska/packages/petsc/linux-gnu-cxx-opt/bin/svn...not found Checking for program /home/hills/seska/packages/openmpi/bin/svn...not found Checking for program /home/hills/bin/svn...not found Checking for program /home/hills/seska/bin/svn...not found Checking for program /home/hills/seska/packages/gid/svn...not found Checking for program /home/hills/seska/packages/petsc/linux-gnu-cxx-opt/bin/svn...not found Checking for program /usr/lib/lightdm/lightdm/svn...not found Checking for program /usr/local/sbin/svn...not found Checking for program /usr/local/bin/svn...not found Checking for program /usr/sbin/svn...not found Checking for program /usr/bin/svn...not found Checking for program /sbin/svn...not found Checking for program /bin/svn...not found Checking for program /usr/games/svn...not found Checking for program /usr/local/games/svn...not found Checking for program /home/hills/svn...not found ================================================================================ TEST configureDirectories from PETSc.utilities.petscdir(/home/hills/seska-hills/packages/petsc-3.4.2/config/PETSc/utilities/petscdir.py:28) TESTING: configureDirectories from PETSc.utilities.petscdir(config/PETSc/utilities/petscdir.py:28) Checks PETSC_DIR and sets if not set Version Information: #define PETSC_VERSION_RELEASE 1 #define PETSC_VERSION_MAJOR 3 #define PETSC_VERSION_MINOR 4 #define PETSC_VERSION_SUBMINOR 2 #define PETSC_VERSION_PATCH 0 #define PETSC_VERSION_DATE "Jul, 02, 2013" #define PETSC_VERSION_GIT "a071802d3efee8b987703a6ce2cf5d9a25fa8160" #define PETSC_VERSION_DATE_GIT "2013-07-02 09:33:06 -0500" #define PETSC_VERSION_(MAJOR,MINOR,SUBMINOR) \ #define PETSC_VERSION_LT(MAJOR,MINOR,SUBMINOR) \ #define PETSC_VERSION_LE(MAJOR,MINOR,SUBMINOR) \ #define PETSC_VERSION_GT(MAJOR,MINOR,SUBMINOR) \ #define PETSC_VERSION_GE(MAJOR,MINOR,SUBMINOR) \ Defined make macro "DIR" to "/home/hills/seska/packages/petsc" Defined "DIR" to ""/home/hills/seska/packages/petsc"" ================================================================================ TEST configureExternalPackagesDir from PETSc.utilities.petscdir(/home/hills/seska-hills/packages/petsc-3.4.2/config/PETSc/utilities/petscdir.py:77) TESTING: configureExternalPackagesDir from PETSc.utilities.petscdir(config/PETSc/utilities/petscdir.py:77) ================================================================================ TEST configureInstallationMethod from PETSc.utilities.petscdir(/home/hills/seska-hills/packages/petsc-3.4.2/config/PETSc/utilities/petscdir.py:84) TESTING: configureInstallationMethod from PETSc.utilities.petscdir(config/PETSc/utilities/petscdir.py:84) This is a tarball installation ================================================================================ TEST configureETags from PETSc.utilities.Etags(/home/hills/seska-hills/packages/petsc-3.4.2/config/PETSc/utilities/Etags.py:27) TESTING: configureETags from PETSc.utilities.Etags(config/PETSc/utilities/Etags.py:27) Determine if etags files exist and try to create otherwise Found etags file ================================================================================ TEST getDatafilespath from PETSc.utilities.dataFilesPath(/home/hills/seska-hills/packages/petsc-3.4.2/config/PETSc/utilities/dataFilesPath.py:29) TESTING: getDatafilespath from PETSc.utilities.dataFilesPath(config/PETSc/utilities/dataFilesPath.py:29) Checks what DATAFILESPATH should be Defined make macro "DATAFILESPATH" to "None" ================================================================================ TEST printEnvVariables from config.setCompilers(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/setCompilers.py:1504) TESTING: printEnvVariables from config.setCompilers(config/BuildSystem/config/setCompilers.py:1504) **** printenv **** XAUTHORITY=/home/hills/.Xauthority NO_PROXY=localhost,127.0.0.0/8 http_proxy=http://127.0.0.1:3128/ FTP_PROXY=http://127.0.0.1:3128/ LESSOPEN=| /usr/bin/lesspipe %s LOGNAME=hills USER=hills GNOME_KEYRING_CONTROL=/run/user/hills/keyring-egKAUF SESKADIR=/home/hills/seska PATH=/home/hills/seska/packages/pdt/x86_64/bin:/home/hills/seska/packages/tau/x86_64/bin:/home/hills/seska/packages/petsc/bin:/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/bin:/home/hills/seska/packages/openmpi/bin:/home/hills/bin:/home/hills/seska/bin:/home/hills/seska/packages/gid:/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/bin:/usr/lib/lightdm/lightdm:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games DISPLAY=:0 SSH_AGENT_PID=29928 LANG=en_US.UTF-8 TERM=xterm SHELL=/bin/bash XDG_SESSION_PATH=/org/freedesktop/DisplayManager/Session4 XDG_SESSION_COOKIE=a0f88417cc0521fa9abb37d753344234-1411371670.433400-1644304174 SESSION_MANAGER=local/riker:@/tmp/.ICE-unix/29883,unix/riker:/tmp/.ICE-unix/29883 SHLVL=1 MANDATORY_PATH=/usr/share/gconf/ubuntu.mandatory.path PWD=/home/hills/seska/packages/petsc TEXTDOMAIN=im-config https_proxy=http://127.0.0.1:3128/ COMPIZ_CONFIG_PROFILE=ubuntu WINDOWID=52428805 PETSC_DIR=/home/hills/seska/packages/petsc GPG_AGENT_INFO=/run/user/hills/keyring-egKAUF/gpg:0:1 HOME=/home/hills no_proxy=localhost,127.0.0.0/8 COMPIZ_BIN_PATH=/usr/bin/ XDG_RUNTIME_DIR=/run/user/hills SSH_AUTH_SOCK=/run/user/hills/keyring-egKAUF/ssh ftp_proxy=http://127.0.0.1:3128/ GDMSESSION=ubuntu TEXTDOMAINDIR=/usr/share/locale/ GNOME_KEYRING_PID=29872 XDG_SEAT_PATH=/org/freedesktop/DisplayManager/Seat0 LESSCLOSE=/usr/bin/lesspipe %s %s XDG_CURRENT_DESKTOP=Unity DBUS_SESSION_BUS_ADDRESS=unix:abstract=/tmp/dbus-kz2obEHDD1,guid=885db529f7dd5729d22dcc23541fd296 _=./configure DEFAULTS_PATH=/usr/share/gconf/ubuntu.default.path DESKTOP_SESSION=ubuntu XDG_CONFIG_DIRS=/etc/xdg/xdg-ubuntu:/etc/xdg GTK_MODULES=overlay-scrollbar UBUNTU_MENUPROXY=libappmenu.so OLDPWD=/home/hills/seska/packages/tau HTTP_PROXY=http://127.0.0.1:3128/ TAU_MAKEFILE=/home/hills/seska/packages/tau/x86_64/lib/Makefile.tau-mpi-pdt HTTPS_PROXY=http://127.0.0.1:3128/ PETSC_ARCH=linux-gnu-cxx-opt COLORTERM=gnome-terminal GNOME_DESKTOP_SESSION_ID=this-is-deprecated LS_COLORS=rs=0:di=01;34:ln=01;36:mh=00:pi=40;33:so=01;35:do=01;35:bd=40;33;01:cd=40;33;01:or=40;31;01:su=37;41:sg=30;43:ca=30;41:tw=30;42:ow=34;42:st=37;44:ex=01;32:*.tar=01;31:*.tgz=01;31:*.arj=01;31:*.taz=01;31:*.lzh=01;31:*.lzma=01;31:*.tlz=01;31:*.txz=01;31:*.zip=01;31:*.z=01;31:*.Z=01;31:*.dz=01;31:*.gz=01;31:*.lz=01;31:*.xz=01;31:*.bz2=01;31:*.bz=01;31:*.tbz=01;31:*.tbz2=01;31:*.tz=01;31:*.deb=01;31:*.rpm=01;31:*.jar=01;31:*.war=01;31:*.ear=01;31:*.sar=01;31:*.rar=01;31:*.ace=01;31:*.zoo=01;31:*.cpio=01;31:*.7z=01;31:*.rz=01;31:*.jpg=01;35:*.jpeg=01;35:*.gif=01;35:*.bmp=01;35:*.pbm=01;35:*.pgm=01;35:*.ppm=01;35:*.tga=01;35:*.xbm=01;35:*.xpm=01;35:*.tif=01;35:*.tiff=01;35:*.png=01;35:*.svg=01;35:*.svgz=01;35:*.mng=01;35:*.pcx=01;35:*.mov=01;35:*.mpg=01;35:*.mpeg=01;35:*.m2v=01;35:*.mkv=01;35:*.webm=01;35:*.ogm=01;35:*.mp4=01;35:*.m4v=01;35:*.mp4v=01;35:*.vob=01;35:*.qt=01;35:*.nuv=01;35:*.wmv=01;35:*.asf=01;35:*.rm=01;35:*.rmvb=01;35:*.flc=01;35:*.avi=01;35:*.fli=01;35:*.flv=01;35:*.gl=01;35:*.dl=01;35:*.xcf=01;35:*.xwd=01;35:*.yuv=01;35:*.cgm=01;35:*.emf=01;35:*.axv=01;35:*.anx=01;35:*.ogv=01;35:*.ogx=01;35:*.aac=00;36:*.au=00;36:*.flac=00;36:*.mid=00;36:*.midi=00;36:*.mka=00;36:*.mp3=00;36:*.mpc=00;36:*.ogg=00;36:*.ra=00;36:*.wav=00;36:*.axa=00;36:*.oga=00;36:*.spx=00;36:*.xspf=00;36: XDG_DATA_DIRS=/usr/share/ubuntu:/usr/share/gnome:/usr/local/share/:/usr/share/ ================================================================================ TEST resetEnvCompilers from config.setCompilers(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/setCompilers.py:1511) TESTING: resetEnvCompilers from config.setCompilers(config/BuildSystem/config/setCompilers.py:1511) ================================================================================ TEST checkMPICompilerOverride from config.setCompilers(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/setCompilers.py:1476) TESTING: checkMPICompilerOverride from config.setCompilers(config/BuildSystem/config/setCompilers.py:1476) Check if --with-mpi-dir is used along with CC CXX or FC compiler options. This usually prevents mpi compilers from being used - so issue a warning ================================================================================ TEST requireMpiLdPath from config.setCompilers(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/setCompilers.py:1495) TESTING: requireMpiLdPath from config.setCompilers(config/BuildSystem/config/setCompilers.py:1495) OpenMPI wrappers require LD_LIBRARY_PATH set ================================================================================ TEST checkVendor from config.setCompilers(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/setCompilers.py:399) TESTING: checkVendor from config.setCompilers(config/BuildSystem/config/setCompilers.py:399) Determine the compiler vendor Compiler vendor is "" ================================================================================ TEST checkInitialFlags from config.setCompilers(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/setCompilers.py:409) TESTING: checkInitialFlags from config.setCompilers(config/BuildSystem/config/setCompilers.py:409) Initialize the compiler and linker flags Pushing language C Initialized CFLAGS to Initialized CFLAGS to Initialized LDFLAGS to Popping language C Pushing language CUDA Initialized CUDAFLAGS to Initialized CUDAFLAGS to Initialized LDFLAGS to Popping language CUDA Pushing language Cxx Initialized CXXFLAGS to Initialized CXX_CXXFLAGS to Initialized LDFLAGS to Popping language Cxx Pushing language FC Initialized FFLAGS to Initialized FFLAGS to Initialized LDFLAGS to Popping language FC Initialized CPPFLAGS to Initialized CUDAPPFLAGS to Initialized CXXCPPFLAGS to Initialized CC_LINKER_FLAGS to [] Initialized CXX_LINKER_FLAGS to [] Initialized FC_LINKER_FLAGS to [] Initialized CUDAC_LINKER_FLAGS to [] Initialized sharedLibraryFlags to [] Initialized dynamicLibraryFlags to [] ================================================================================ TEST checkCCompiler from config.setCompilers(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/setCompilers.py:525) TESTING: checkCCompiler from config.setCompilers(config/BuildSystem/config/setCompilers.py:525) Locate a functional C compiler Checking for program /home/hills/seska/packages/pdt/x86_64/bin/tau_cc.sh...not found Checking for program /home/hills/seska/packages/tau/x86_64/bin/tau_cc.sh...found Defined make macro "CC" to "tau_cc.sh" Pushing language C All intermediate test results are stored in /tmp/petsc-U9YCMv/config.setCompilers sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers /tmp/petsc-U9YCMv/config.setCompilers/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers /tmp/petsc-U9YCMv/config.setCompilers/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.setCompilers/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.setCompilers/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers /tmp/petsc-U9YCMv/config.setCompilers/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers /tmp/petsc-U9YCMv/config.setCompilers/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.setCompilers/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.setCompilers/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language C Popping language C Pushing language CUDA Popping language CUDA Pushing language Cxx Popping language Cxx Pushing language FC Popping language FC Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.setCompilers/conftest /tmp/petsc-U9YCMv/config.setCompilers/conftest.o Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.setCompilers/conftest /tmp/petsc-U9YCMv/config.setCompilers/conftest.o sh: Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.setCompilers/conftest /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers /tmp/petsc-U9YCMv/config.setCompilers/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers /tmp/petsc-U9YCMv/config.setCompilers/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.setCompilers/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.setCompilers/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.setCompilers/conftest /tmp/petsc-U9YCMv/config.setCompilers/conftest.o Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.setCompilers/conftest /tmp/petsc-U9YCMv/config.setCompilers/conftest.o sh: Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.setCompilers/conftest /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt Executing: /tmp/petsc-U9YCMv/config.setCompilers/conftest sh: /tmp/petsc-U9YCMv/config.setCompilers/conftest Executing: /tmp/petsc-U9YCMv/config.setCompilers/conftest sh: Popping language C ================================================================================ TEST checkCPreprocessor from config.setCompilers(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/setCompilers.py:560) TESTING: checkCPreprocessor from config.setCompilers(config/BuildSystem/config/setCompilers.py:560) Locate a functional C preprocessor Checking for program /home/hills/seska/packages/pdt/x86_64/bin/tau_cc.sh...not found Checking for program /home/hills/seska/packages/tau/x86_64/bin/tau_cc.sh...found Defined make macro "CPP" to "tau_cc.sh -E" Pushing language C sh: tau_cc.sh -E -I/tmp/petsc-U9YCMv/config.setCompilers /tmp/petsc-U9YCMv/config.setCompilers/conftest.c Executing: tau_cc.sh -E -I/tmp/petsc-U9YCMv/config.setCompilers /tmp/petsc-U9YCMv/config.setCompilers/conftest.c sh: # 1 "/tmp/petsc-U9YCMv/config.setCompilers/conftest.c" # 1 "" # 1 "/tmp/petsc-U9YCMv/config.setCompilers/conftest.c" # 1 "/tmp/petsc-U9YCMv/config.setCompilers/confdefs.h" 1 # 2 "/tmp/petsc-U9YCMv/config.setCompilers/conftest.c" 2 # 1 "/tmp/petsc-U9YCMv/config.setCompilers/conffix.h" 1 # 3 "/tmp/petsc-U9YCMv/config.setCompilers/conftest.c" 2 # 1 "/usr/include/stdlib.h" 1 3 4 # 24 "/usr/include/stdlib.h" 3 4 # 1 "/usr/include/features.h" 1 3 4 # 341 "/usr/include/features.h" 3 4 # 1 "/usr/include/stdc-predef.h" 1 3 4 # 30 "/usr/include/stdc-predef.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/predefs.h" 1 3 4 # 31 "/usr/include/stdc-predef.h" 2 3 4 # 342 "/usr/include/features.h" 2 3 4 # 371 "/usr/include/features.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/sys/cdefs.h" 1 3 4 # 385 "/usr/include/x86_64-linux-gnu/sys/cdefs.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/wordsize.h" 1 3 4 # 386 "/usr/include/x86_64-linux-gnu/sys/cdefs.h" 2 3 4 # 372 "/usr/include/features.h" 2 3 4 # 395 "/usr/include/features.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/gnu/stubs.h" 1 3 4 # 10 "/usr/include/x86_64-linux-gnu/gnu/stubs.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/gnu/stubs-64.h" 1 3 4 # 11 "/usr/include/x86_64-linux-gnu/gnu/stubs.h" 2 3 4 # 396 "/usr/include/features.h" 2 3 4 # 25 "/usr/include/stdlib.h" 2 3 4 # 1 "/usr/lib/gcc/x86_64-linux-gnu/4.7/include/stddef.h" 1 3 4 # 213 "/usr/lib/gcc/x86_64-linux-gnu/4.7/include/stddef.h" 3 4 typedef long unsigned int size_t; # 325 "/usr/lib/gcc/x86_64-linux-gnu/4.7/include/stddef.h" 3 4 typedef int wchar_t; # 33 "/usr/include/stdlib.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/waitflags.h" 1 3 4 # 42 "/usr/include/stdlib.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/waitstatus.h" 1 3 4 # 64 "/usr/include/x86_64-linux-gnu/bits/waitstatus.h" 3 4 # 1 "/usr/include/endian.h" 1 3 4 # 36 "/usr/include/endian.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/endian.h" 1 3 4 # 37 "/usr/include/endian.h" 2 3 4 # 60 "/usr/include/endian.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/byteswap.h" 1 3 4 # 27 "/usr/include/x86_64-linux-gnu/bits/byteswap.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/types.h" 1 3 4 # 27 "/usr/include/x86_64-linux-gnu/bits/types.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/wordsize.h" 1 3 4 # 28 "/usr/include/x86_64-linux-gnu/bits/types.h" 2 3 4 typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; # 130 "/usr/include/x86_64-linux-gnu/bits/types.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/typesizes.h" 1 3 4 # 131 "/usr/include/x86_64-linux-gnu/bits/types.h" 2 3 4 typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned long int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef long int __suseconds_t; typedef int __daddr_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __fsword_t; typedef long int __ssize_t; typedef long int __syscall_slong_t; typedef unsigned long int __syscall_ulong_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; # 28 "/usr/include/x86_64-linux-gnu/bits/byteswap.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/wordsize.h" 1 3 4 # 29 "/usr/include/x86_64-linux-gnu/bits/byteswap.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/byteswap-16.h" 1 3 4 # 36 "/usr/include/x86_64-linux-gnu/bits/byteswap.h" 2 3 4 # 44 "/usr/include/x86_64-linux-gnu/bits/byteswap.h" 3 4 static __inline unsigned int __bswap_32 (unsigned int __bsx) { return __builtin_bswap32 (__bsx); } # 108 "/usr/include/x86_64-linux-gnu/bits/byteswap.h" 3 4 static __inline __uint64_t __bswap_64 (__uint64_t __bsx) { return __builtin_bswap64 (__bsx); } # 61 "/usr/include/endian.h" 2 3 4 # 65 "/usr/include/x86_64-linux-gnu/bits/waitstatus.h" 2 3 4 union wait { int w_status; struct { unsigned int __w_termsig:7; unsigned int __w_coredump:1; unsigned int __w_retcode:8; unsigned int:16; } __wait_terminated; struct { unsigned int __w_stopval:8; unsigned int __w_stopsig:8; unsigned int:16; } __wait_stopped; }; # 43 "/usr/include/stdlib.h" 2 3 4 # 67 "/usr/include/stdlib.h" 3 4 typedef union { union wait *__uptr; int *__iptr; } __WAIT_STATUS __attribute__ ((__transparent_union__)); # 95 "/usr/include/stdlib.h" 3 4 typedef struct { int quot; int rem; } div_t; typedef struct { long int quot; long int rem; } ldiv_t; __extension__ typedef struct { long long int quot; long long int rem; } lldiv_t; # 139 "/usr/include/stdlib.h" 3 4 extern size_t __ctype_get_mb_cur_max (void) __attribute__ ((__nothrow__ , __leaf__)) ; extern double atof (const char *__nptr) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1))) ; extern int atoi (const char *__nptr) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1))) ; extern long int atol (const char *__nptr) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1))) ; __extension__ extern long long int atoll (const char *__nptr) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1))) ; extern double strtod (const char *__restrict __nptr, char **__restrict __endptr) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern float strtof (const char *__restrict __nptr, char **__restrict __endptr) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern long double strtold (const char *__restrict __nptr, char **__restrict __endptr) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern long int strtol (const char *__restrict __nptr, char **__restrict __endptr, int __base) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern unsigned long int strtoul (const char *__restrict __nptr, char **__restrict __endptr, int __base) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); __extension__ extern long long int strtoq (const char *__restrict __nptr, char **__restrict __endptr, int __base) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); __extension__ extern unsigned long long int strtouq (const char *__restrict __nptr, char **__restrict __endptr, int __base) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); __extension__ extern long long int strtoll (const char *__restrict __nptr, char **__restrict __endptr, int __base) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); __extension__ extern unsigned long long int strtoull (const char *__restrict __nptr, char **__restrict __endptr, int __base) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); # 305 "/usr/include/stdlib.h" 3 4 extern char *l64a (long int __n) __attribute__ ((__nothrow__ , __leaf__)) ; extern long int a64l (const char *__s) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1))) ; # 1 "/usr/include/x86_64-linux-gnu/sys/types.h" 1 3 4 # 27 "/usr/include/x86_64-linux-gnu/sys/types.h" 3 4 typedef __u_char u_char; typedef __u_short u_short; typedef __u_int u_int; typedef __u_long u_long; typedef __quad_t quad_t; typedef __u_quad_t u_quad_t; typedef __fsid_t fsid_t; typedef __loff_t loff_t; typedef __ino_t ino_t; # 60 "/usr/include/x86_64-linux-gnu/sys/types.h" 3 4 typedef __dev_t dev_t; typedef __gid_t gid_t; typedef __mode_t mode_t; typedef __nlink_t nlink_t; typedef __uid_t uid_t; typedef __off_t off_t; # 98 "/usr/include/x86_64-linux-gnu/sys/types.h" 3 4 typedef __pid_t pid_t; typedef __id_t id_t; typedef __ssize_t ssize_t; typedef __daddr_t daddr_t; typedef __caddr_t caddr_t; typedef __key_t key_t; # 132 "/usr/include/x86_64-linux-gnu/sys/types.h" 3 4 # 1 "/usr/include/time.h" 1 3 4 # 57 "/usr/include/time.h" 3 4 typedef __clock_t clock_t; # 73 "/usr/include/time.h" 3 4 typedef __time_t time_t; # 91 "/usr/include/time.h" 3 4 typedef __clockid_t clockid_t; # 103 "/usr/include/time.h" 3 4 typedef __timer_t timer_t; # 133 "/usr/include/x86_64-linux-gnu/sys/types.h" 2 3 4 # 146 "/usr/include/x86_64-linux-gnu/sys/types.h" 3 4 # 1 "/usr/lib/gcc/x86_64-linux-gnu/4.7/include/stddef.h" 1 3 4 # 147 "/usr/include/x86_64-linux-gnu/sys/types.h" 2 3 4 typedef unsigned long int ulong; typedef unsigned short int ushort; typedef unsigned int uint; # 194 "/usr/include/x86_64-linux-gnu/sys/types.h" 3 4 typedef int int8_t __attribute__ ((__mode__ (__QI__))); typedef int int16_t __attribute__ ((__mode__ (__HI__))); typedef int int32_t __attribute__ ((__mode__ (__SI__))); typedef int int64_t __attribute__ ((__mode__ (__DI__))); typedef unsigned int u_int8_t __attribute__ ((__mode__ (__QI__))); typedef unsigned int u_int16_t __attribute__ ((__mode__ (__HI__))); typedef unsigned int u_int32_t __attribute__ ((__mode__ (__SI__))); typedef unsigned int u_int64_t __attribute__ ((__mode__ (__DI__))); typedef int register_t __attribute__ ((__mode__ (__word__))); # 219 "/usr/include/x86_64-linux-gnu/sys/types.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/sys/select.h" 1 3 4 # 30 "/usr/include/x86_64-linux-gnu/sys/select.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/select.h" 1 3 4 # 22 "/usr/include/x86_64-linux-gnu/bits/select.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/wordsize.h" 1 3 4 # 23 "/usr/include/x86_64-linux-gnu/bits/select.h" 2 3 4 # 31 "/usr/include/x86_64-linux-gnu/sys/select.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/sigset.h" 1 3 4 # 23 "/usr/include/x86_64-linux-gnu/bits/sigset.h" 3 4 typedef int __sig_atomic_t; typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; # 34 "/usr/include/x86_64-linux-gnu/sys/select.h" 2 3 4 typedef __sigset_t sigset_t; # 1 "/usr/include/time.h" 1 3 4 # 120 "/usr/include/time.h" 3 4 struct timespec { __time_t tv_sec; __syscall_slong_t tv_nsec; }; # 44 "/usr/include/x86_64-linux-gnu/sys/select.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/time.h" 1 3 4 # 30 "/usr/include/x86_64-linux-gnu/bits/time.h" 3 4 struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; # 46 "/usr/include/x86_64-linux-gnu/sys/select.h" 2 3 4 typedef __suseconds_t suseconds_t; typedef long int __fd_mask; # 64 "/usr/include/x86_64-linux-gnu/sys/select.h" 3 4 typedef struct { __fd_mask __fds_bits[1024 / (8 * (int) sizeof (__fd_mask))]; } fd_set; typedef __fd_mask fd_mask; # 96 "/usr/include/x86_64-linux-gnu/sys/select.h" 3 4 # 106 "/usr/include/x86_64-linux-gnu/sys/select.h" 3 4 extern int select (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, struct timeval *__restrict __timeout); # 118 "/usr/include/x86_64-linux-gnu/sys/select.h" 3 4 extern int pselect (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, const struct timespec *__restrict __timeout, const __sigset_t *__restrict __sigmask); # 131 "/usr/include/x86_64-linux-gnu/sys/select.h" 3 4 # 220 "/usr/include/x86_64-linux-gnu/sys/types.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/sys/sysmacros.h" 1 3 4 # 29 "/usr/include/x86_64-linux-gnu/sys/sysmacros.h" 3 4 __extension__ extern unsigned int gnu_dev_major (unsigned long long int __dev) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); __extension__ extern unsigned int gnu_dev_minor (unsigned long long int __dev) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); __extension__ extern unsigned long long int gnu_dev_makedev (unsigned int __major, unsigned int __minor) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); # 63 "/usr/include/x86_64-linux-gnu/sys/sysmacros.h" 3 4 # 223 "/usr/include/x86_64-linux-gnu/sys/types.h" 2 3 4 typedef __blksize_t blksize_t; typedef __blkcnt_t blkcnt_t; typedef __fsblkcnt_t fsblkcnt_t; typedef __fsfilcnt_t fsfilcnt_t; # 270 "/usr/include/x86_64-linux-gnu/sys/types.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/pthreadtypes.h" 1 3 4 # 21 "/usr/include/x86_64-linux-gnu/bits/pthreadtypes.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/wordsize.h" 1 3 4 # 22 "/usr/include/x86_64-linux-gnu/bits/pthreadtypes.h" 2 3 4 # 60 "/usr/include/x86_64-linux-gnu/bits/pthreadtypes.h" 3 4 typedef unsigned long int pthread_t; union pthread_attr_t { char __size[56]; long int __align; }; typedef union pthread_attr_t pthread_attr_t; typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; # 90 "/usr/include/x86_64-linux-gnu/bits/pthreadtypes.h" 3 4 typedef union { struct __pthread_mutex_s { int __lock; unsigned int __count; int __owner; unsigned int __nusers; int __kind; int __spins; __pthread_list_t __list; # 115 "/usr/include/x86_64-linux-gnu/bits/pthreadtypes.h" 3 4 } __data; char __size[40]; long int __align; } pthread_mutex_t; typedef union { char __size[4]; int __align; } pthread_mutexattr_t; typedef union { struct { int __lock; unsigned int __futex; __extension__ unsigned long long int __total_seq; __extension__ unsigned long long int __wakeup_seq; __extension__ unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; __extension__ long long int __align; } pthread_cond_t; typedef union { char __size[4]; int __align; } pthread_condattr_t; typedef unsigned int pthread_key_t; typedef int pthread_once_t; typedef union { struct { int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; unsigned int __flags; } __data; # 202 "/usr/include/x86_64-linux-gnu/bits/pthreadtypes.h" 3 4 char __size[56]; long int __align; } pthread_rwlock_t; typedef union { char __size[8]; long int __align; } pthread_rwlockattr_t; typedef volatile int pthread_spinlock_t; typedef union { char __size[32]; long int __align; } pthread_barrier_t; typedef union { char __size[4]; int __align; } pthread_barrierattr_t; # 271 "/usr/include/x86_64-linux-gnu/sys/types.h" 2 3 4 # 315 "/usr/include/stdlib.h" 2 3 4 extern long int random (void) __attribute__ ((__nothrow__ , __leaf__)); extern void srandom (unsigned int __seed) __attribute__ ((__nothrow__ , __leaf__)); extern char *initstate (unsigned int __seed, char *__statebuf, size_t __statelen) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (2))); extern char *setstate (char *__statebuf) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); struct random_data { int32_t *fptr; int32_t *rptr; int32_t *state; int rand_type; int rand_deg; int rand_sep; int32_t *end_ptr; }; extern int random_r (struct random_data *__restrict __buf, int32_t *__restrict __result) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))); extern int srandom_r (unsigned int __seed, struct random_data *__buf) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (2))); extern int initstate_r (unsigned int __seed, char *__restrict __statebuf, size_t __statelen, struct random_data *__restrict __buf) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (2, 4))); extern int setstate_r (char *__restrict __statebuf, struct random_data *__restrict __buf) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))); extern int rand (void) __attribute__ ((__nothrow__ , __leaf__)); extern void srand (unsigned int __seed) __attribute__ ((__nothrow__ , __leaf__)); extern int rand_r (unsigned int *__seed) __attribute__ ((__nothrow__ , __leaf__)); extern double drand48 (void) __attribute__ ((__nothrow__ , __leaf__)); extern double erand48 (unsigned short int __xsubi[3]) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern long int lrand48 (void) __attribute__ ((__nothrow__ , __leaf__)); extern long int nrand48 (unsigned short int __xsubi[3]) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern long int mrand48 (void) __attribute__ ((__nothrow__ , __leaf__)); extern long int jrand48 (unsigned short int __xsubi[3]) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern void srand48 (long int __seedval) __attribute__ ((__nothrow__ , __leaf__)); extern unsigned short int *seed48 (unsigned short int __seed16v[3]) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern void lcong48 (unsigned short int __param[7]) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); struct drand48_data { unsigned short int __x[3]; unsigned short int __old_x[3]; unsigned short int __c; unsigned short int __init; unsigned long long int __a; }; extern int drand48_r (struct drand48_data *__restrict __buffer, double *__restrict __result) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))); extern int erand48_r (unsigned short int __xsubi[3], struct drand48_data *__restrict __buffer, double *__restrict __result) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))); extern int lrand48_r (struct drand48_data *__restrict __buffer, long int *__restrict __result) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))); extern int nrand48_r (unsigned short int __xsubi[3], struct drand48_data *__restrict __buffer, long int *__restrict __result) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))); extern int mrand48_r (struct drand48_data *__restrict __buffer, long int *__restrict __result) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))); extern int jrand48_r (unsigned short int __xsubi[3], struct drand48_data *__restrict __buffer, long int *__restrict __result) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))); extern int srand48_r (long int __seedval, struct drand48_data *__buffer) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (2))); extern int seed48_r (unsigned short int __seed16v[3], struct drand48_data *__buffer) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))); extern int lcong48_r (unsigned short int __param[7], struct drand48_data *__buffer) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))); extern void *malloc (size_t __size) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__malloc__)) ; extern void *calloc (size_t __nmemb, size_t __size) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__malloc__)) ; extern void *realloc (void *__ptr, size_t __size) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__warn_unused_result__)); extern void free (void *__ptr) __attribute__ ((__nothrow__ , __leaf__)); extern void cfree (void *__ptr) __attribute__ ((__nothrow__ , __leaf__)); # 1 "/usr/include/alloca.h" 1 3 4 # 24 "/usr/include/alloca.h" 3 4 # 1 "/usr/lib/gcc/x86_64-linux-gnu/4.7/include/stddef.h" 1 3 4 # 25 "/usr/include/alloca.h" 2 3 4 extern void *alloca (size_t __size) __attribute__ ((__nothrow__ , __leaf__)); # 492 "/usr/include/stdlib.h" 2 3 4 extern void *valloc (size_t __size) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__malloc__)) ; extern int posix_memalign (void **__memptr, size_t __alignment, size_t __size) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))) ; # 512 "/usr/include/stdlib.h" 3 4 extern void abort (void) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__noreturn__)); extern int atexit (void (*__func) (void)) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); # 529 "/usr/include/stdlib.h" 3 4 extern int on_exit (void (*__func) (int __status, void *__arg), void *__arg) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern void exit (int __status) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__noreturn__)); extern void _Exit (int __status) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__noreturn__)); extern char *getenv (const char *__name) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))) ; # 577 "/usr/include/stdlib.h" 3 4 extern int putenv (char *__string) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern int setenv (const char *__name, const char *__value, int __replace) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (2))); extern int unsetenv (const char *__name) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern int clearenv (void) __attribute__ ((__nothrow__ , __leaf__)); # 605 "/usr/include/stdlib.h" 3 4 extern char *mktemp (char *__template) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); # 619 "/usr/include/stdlib.h" 3 4 extern int mkstemp (char *__template) __attribute__ ((__nonnull__ (1))) ; # 641 "/usr/include/stdlib.h" 3 4 extern int mkstemps (char *__template, int __suffixlen) __attribute__ ((__nonnull__ (1))) ; # 662 "/usr/include/stdlib.h" 3 4 extern char *mkdtemp (char *__template) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))) ; # 711 "/usr/include/stdlib.h" 3 4 extern int system (const char *__command) ; # 733 "/usr/include/stdlib.h" 3 4 extern char *realpath (const char *__restrict __name, char *__restrict __resolved) __attribute__ ((__nothrow__ , __leaf__)) ; typedef int (*__compar_fn_t) (const void *, const void *); # 751 "/usr/include/stdlib.h" 3 4 extern void *bsearch (const void *__key, const void *__base, size_t __nmemb, size_t __size, __compar_fn_t __compar) __attribute__ ((__nonnull__ (1, 2, 5))) ; extern void qsort (void *__base, size_t __nmemb, size_t __size, __compar_fn_t __compar) __attribute__ ((__nonnull__ (1, 4))); # 770 "/usr/include/stdlib.h" 3 4 extern int abs (int __x) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)) ; extern long int labs (long int __x) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)) ; __extension__ extern long long int llabs (long long int __x) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)) ; extern div_t div (int __numer, int __denom) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)) ; extern ldiv_t ldiv (long int __numer, long int __denom) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)) ; __extension__ extern lldiv_t lldiv (long long int __numer, long long int __denom) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)) ; # 807 "/usr/include/stdlib.h" 3 4 extern char *ecvt (double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (3, 4))) ; extern char *fcvt (double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (3, 4))) ; extern char *gcvt (double __value, int __ndigit, char *__buf) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (3))) ; extern char *qecvt (long double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (3, 4))) ; extern char *qfcvt (long double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (3, 4))) ; extern char *qgcvt (long double __value, int __ndigit, char *__buf) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (3))) ; extern int ecvt_r (double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign, char *__restrict __buf, size_t __len) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (3, 4, 5))); extern int fcvt_r (double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign, char *__restrict __buf, size_t __len) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (3, 4, 5))); extern int qecvt_r (long double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign, char *__restrict __buf, size_t __len) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (3, 4, 5))); extern int qfcvt_r (long double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign, char *__restrict __buf, size_t __len) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (3, 4, 5))); extern int mblen (const char *__s, size_t __n) __attribute__ ((__nothrow__ , __leaf__)) ; extern int mbtowc (wchar_t *__restrict __pwc, const char *__restrict __s, size_t __n) __attribute__ ((__nothrow__ , __leaf__)) ; extern int wctomb (char *__s, wchar_t __wchar) __attribute__ ((__nothrow__ , __leaf__)) ; extern size_t mbstowcs (wchar_t *__restrict __pwcs, const char *__restrict __s, size_t __n) __attribute__ ((__nothrow__ , __leaf__)); extern size_t wcstombs (char *__restrict __s, const wchar_t *__restrict __pwcs, size_t __n) __attribute__ ((__nothrow__ , __leaf__)); extern int rpmatch (const char *__response) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))) ; # 895 "/usr/include/stdlib.h" 3 4 extern int getsubopt (char **__restrict __optionp, char *const *__restrict __tokens, char **__restrict __valuep) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2, 3))) ; # 947 "/usr/include/stdlib.h" 3 4 extern int getloadavg (double __loadavg[], int __nelem) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); # 1 "/usr/include/x86_64-linux-gnu/bits/stdlib-float.h" 1 3 4 # 952 "/usr/include/stdlib.h" 2 3 4 # 964 "/usr/include/stdlib.h" 3 4 # 3 "/tmp/petsc-U9YCMv/config.setCompilers/conftest.c" 2 Popping language C ================================================================================ TEST checkCUDACompiler from config.setCompilers(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/setCompilers.py:594) TESTING: checkCUDACompiler from config.setCompilers(config/BuildSystem/config/setCompilers.py:594) Locate a functional CUDA compiler Checking for program /home/hills/seska/packages/pdt/x86_64/bin/nvcc...not found Checking for program /home/hills/seska/packages/tau/x86_64/bin/nvcc...not found Checking for program /home/hills/seska/packages/petsc/bin/nvcc...not found Checking for program /home/hills/seska/packages/petsc/linux-gnu-cxx-opt/bin/nvcc...not found Checking for program /home/hills/seska/packages/openmpi/bin/nvcc...not found Checking for program /home/hills/bin/nvcc...not found Checking for program /home/hills/seska/bin/nvcc...not found Checking for program /home/hills/seska/packages/gid/nvcc...not found Checking for program /home/hills/seska/packages/petsc/linux-gnu-cxx-opt/bin/nvcc...not found Checking for program /usr/lib/lightdm/lightdm/nvcc...not found Checking for program /usr/local/sbin/nvcc...not found Checking for program /usr/local/bin/nvcc...not found Checking for program /usr/sbin/nvcc...not found Checking for program /usr/bin/nvcc...not found Checking for program /sbin/nvcc...not found Checking for program /bin/nvcc...not found Checking for program /usr/games/nvcc...not found Checking for program /usr/local/games/nvcc...not found Checking for program /home/hills/nvcc...not found Checking for program /home/hills/seska/packages/petsc/bin/win32fe/nvcc...not found Checking for program /home/hills/seska/packages/pdt/x86_64/bin/nvcc...not found Checking for program /home/hills/seska/packages/tau/x86_64/bin/nvcc...not found Checking for program /home/hills/seska/packages/petsc/bin/nvcc...not found Checking for program /home/hills/seska/packages/petsc/linux-gnu-cxx-opt/bin/nvcc...not found Checking for program /home/hills/seska/packages/openmpi/bin/nvcc...not found Checking for program /home/hills/bin/nvcc...not found Checking for program /home/hills/seska/bin/nvcc...not found Checking for program /home/hills/seska/packages/gid/nvcc...not found Checking for program /home/hills/seska/packages/petsc/linux-gnu-cxx-opt/bin/nvcc...not found Checking for program /usr/lib/lightdm/lightdm/nvcc...not found Checking for program /usr/local/sbin/nvcc...not found Checking for program /usr/local/bin/nvcc...not found Checking for program /usr/sbin/nvcc...not found Checking for program /usr/bin/nvcc...not found Checking for program /sbin/nvcc...not found Checking for program /bin/nvcc...not found Checking for program /usr/games/nvcc...not found Checking for program /usr/local/games/nvcc...not found Checking for program /home/hills/nvcc...not found Checking for program /home/hills/seska/packages/petsc/bin/win32fe/nvcc...not found ================================================================================ TEST checkCUDAPreprocessor from config.setCompilers(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/setCompilers.py:632) TESTING: checkCUDAPreprocessor from config.setCompilers(config/BuildSystem/config/setCompilers.py:632) Locate a functional CUDA preprocessor ================================================================================ TEST checkCxxCompiler from config.setCompilers(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/setCompilers.py:735) TESTING: checkCxxCompiler from config.setCompilers(config/BuildSystem/config/setCompilers.py:735) Locate a functional Cxx compiler Checking for program /home/hills/seska/packages/pdt/x86_64/bin/mpicxx...not found Checking for program /home/hills/seska/packages/tau/x86_64/bin/mpicxx...not found Checking for program /home/hills/seska/packages/petsc/bin/mpicxx...not found Checking for program /home/hills/seska/packages/petsc/linux-gnu-cxx-opt/bin/mpicxx...found Defined make macro "CXX" to "mpicxx" Pushing language Cxx sh: mpicxx -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers /tmp/petsc-U9YCMv/config.setCompilers/conftest.cc Executing: mpicxx -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers /tmp/petsc-U9YCMv/config.setCompilers/conftest.cc sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } sh: mpicxx -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers /tmp/petsc-U9YCMv/config.setCompilers/conftest.cc Executing: mpicxx -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers /tmp/petsc-U9YCMv/config.setCompilers/conftest.cc sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language C Popping language C Pushing language CUDA Popping language CUDA Pushing language Cxx Popping language Cxx Pushing language FC Popping language FC Pushing language CXX Popping language CXX sh: mpicxx -o /tmp/petsc-U9YCMv/config.setCompilers/conftest /tmp/petsc-U9YCMv/config.setCompilers/conftest.o Executing: mpicxx -o /tmp/petsc-U9YCMv/config.setCompilers/conftest /tmp/petsc-U9YCMv/config.setCompilers/conftest.o sh: sh: mpicxx -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers /tmp/petsc-U9YCMv/config.setCompilers/conftest.cc Executing: mpicxx -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers /tmp/petsc-U9YCMv/config.setCompilers/conftest.cc sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language CXX Popping language CXX sh: mpicxx -o /tmp/petsc-U9YCMv/config.setCompilers/conftest /tmp/petsc-U9YCMv/config.setCompilers/conftest.o Executing: mpicxx -o /tmp/petsc-U9YCMv/config.setCompilers/conftest /tmp/petsc-U9YCMv/config.setCompilers/conftest.o sh: Executing: /tmp/petsc-U9YCMv/config.setCompilers/conftest sh: /tmp/petsc-U9YCMv/config.setCompilers/conftest Executing: /tmp/petsc-U9YCMv/config.setCompilers/conftest sh: Popping language Cxx ================================================================================ TEST checkCxxPreprocessor from config.setCompilers(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/setCompilers.py:773) TESTING: checkCxxPreprocessor from config.setCompilers(config/BuildSystem/config/setCompilers.py:773) Locate a functional Cxx preprocessor Checking for program /home/hills/seska/packages/pdt/x86_64/bin/mpicxx...not found Checking for program /home/hills/seska/packages/tau/x86_64/bin/mpicxx...not found Checking for program /home/hills/seska/packages/petsc/bin/mpicxx...not found Checking for program /home/hills/seska/packages/petsc/linux-gnu-cxx-opt/bin/mpicxx...found Defined make macro "CXXCPP" to "mpicxx -E" Pushing language Cxx sh: mpicxx -E -I/tmp/petsc-U9YCMv/config.setCompilers /tmp/petsc-U9YCMv/config.setCompilers/conftest.cc Executing: mpicxx -E -I/tmp/petsc-U9YCMv/config.setCompilers /tmp/petsc-U9YCMv/config.setCompilers/conftest.cc sh: # 1 "/tmp/petsc-U9YCMv/config.setCompilers/conftest.cc" # 1 "/home/hills/seska/packages/petsc//" # 1 "" # 1 "/tmp/petsc-U9YCMv/config.setCompilers/conftest.cc" # 1 "/tmp/petsc-U9YCMv/config.setCompilers/confdefs.h" 1 # 2 "/tmp/petsc-U9YCMv/config.setCompilers/conftest.cc" 2 # 1 "/tmp/petsc-U9YCMv/config.setCompilers/conffix.h" 1 extern "C" { } # 3 "/tmp/petsc-U9YCMv/config.setCompilers/conftest.cc" 2 # 1 "/usr/include/c++/4.7/cstdlib" 1 3 # 41 "/usr/include/c++/4.7/cstdlib" 3 # 42 "/usr/include/c++/4.7/cstdlib" 3 # 1 "/usr/include/x86_64-linux-gnu/c++/4.7/./bits/c++config.h" 1 3 # 171 "/usr/include/x86_64-linux-gnu/c++/4.7/./bits/c++config.h" 3 namespace std { typedef long unsigned int size_t; typedef long int ptrdiff_t; } # 414 "/usr/include/x86_64-linux-gnu/c++/4.7/./bits/c++config.h" 3 # 1 "/usr/include/x86_64-linux-gnu/c++/4.7/./bits/os_defines.h" 1 3 # 40 "/usr/include/x86_64-linux-gnu/c++/4.7/./bits/os_defines.h" 3 # 1 "/usr/include/features.h" 1 3 4 # 341 "/usr/include/features.h" 3 4 # 1 "/usr/include/stdc-predef.h" 1 3 4 # 30 "/usr/include/stdc-predef.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/predefs.h" 1 3 4 # 31 "/usr/include/stdc-predef.h" 2 3 4 # 342 "/usr/include/features.h" 2 3 4 # 371 "/usr/include/features.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/sys/cdefs.h" 1 3 4 # 385 "/usr/include/x86_64-linux-gnu/sys/cdefs.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/wordsize.h" 1 3 4 # 386 "/usr/include/x86_64-linux-gnu/sys/cdefs.h" 2 3 4 # 372 "/usr/include/features.h" 2 3 4 # 395 "/usr/include/features.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/gnu/stubs.h" 1 3 4 # 10 "/usr/include/x86_64-linux-gnu/gnu/stubs.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/gnu/stubs-64.h" 1 3 4 # 11 "/usr/include/x86_64-linux-gnu/gnu/stubs.h" 2 3 4 # 396 "/usr/include/features.h" 2 3 4 # 41 "/usr/include/x86_64-linux-gnu/c++/4.7/./bits/os_defines.h" 2 3 # 415 "/usr/include/x86_64-linux-gnu/c++/4.7/./bits/c++config.h" 2 3 # 1 "/usr/include/x86_64-linux-gnu/c++/4.7/./bits/cpu_defines.h" 1 3 # 418 "/usr/include/x86_64-linux-gnu/c++/4.7/./bits/c++config.h" 2 3 # 44 "/usr/include/c++/4.7/cstdlib" 2 3 # 66 "/usr/include/c++/4.7/cstdlib" 3 # 1 "/usr/include/stdlib.h" 1 3 4 # 32 "/usr/include/stdlib.h" 3 4 # 1 "/usr/lib/gcc/x86_64-linux-gnu/4.7/include/stddef.h" 1 3 4 # 213 "/usr/lib/gcc/x86_64-linux-gnu/4.7/include/stddef.h" 3 4 typedef long unsigned int size_t; # 33 "/usr/include/stdlib.h" 2 3 4 extern "C" { # 1 "/usr/include/x86_64-linux-gnu/bits/waitflags.h" 1 3 4 # 42 "/usr/include/stdlib.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/waitstatus.h" 1 3 4 # 64 "/usr/include/x86_64-linux-gnu/bits/waitstatus.h" 3 4 # 1 "/usr/include/endian.h" 1 3 4 # 36 "/usr/include/endian.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/endian.h" 1 3 4 # 37 "/usr/include/endian.h" 2 3 4 # 60 "/usr/include/endian.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/byteswap.h" 1 3 4 # 27 "/usr/include/x86_64-linux-gnu/bits/byteswap.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/types.h" 1 3 4 # 27 "/usr/include/x86_64-linux-gnu/bits/types.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/wordsize.h" 1 3 4 # 28 "/usr/include/x86_64-linux-gnu/bits/types.h" 2 3 4 typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; # 130 "/usr/include/x86_64-linux-gnu/bits/types.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/typesizes.h" 1 3 4 # 131 "/usr/include/x86_64-linux-gnu/bits/types.h" 2 3 4 typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned long int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef long int __suseconds_t; typedef int __daddr_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __fsword_t; typedef long int __ssize_t; typedef long int __syscall_slong_t; typedef unsigned long int __syscall_ulong_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; # 28 "/usr/include/x86_64-linux-gnu/bits/byteswap.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/wordsize.h" 1 3 4 # 29 "/usr/include/x86_64-linux-gnu/bits/byteswap.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/byteswap-16.h" 1 3 4 # 36 "/usr/include/x86_64-linux-gnu/bits/byteswap.h" 2 3 4 # 44 "/usr/include/x86_64-linux-gnu/bits/byteswap.h" 3 4 static __inline unsigned int __bswap_32 (unsigned int __bsx) { return __builtin_bswap32 (__bsx); } # 108 "/usr/include/x86_64-linux-gnu/bits/byteswap.h" 3 4 static __inline __uint64_t __bswap_64 (__uint64_t __bsx) { return __builtin_bswap64 (__bsx); } # 61 "/usr/include/endian.h" 2 3 4 # 65 "/usr/include/x86_64-linux-gnu/bits/waitstatus.h" 2 3 4 union wait { int w_status; struct { unsigned int __w_termsig:7; unsigned int __w_coredump:1; unsigned int __w_retcode:8; unsigned int:16; } __wait_terminated; struct { unsigned int __w_stopval:8; unsigned int __w_stopsig:8; unsigned int:16; } __wait_stopped; }; # 43 "/usr/include/stdlib.h" 2 3 4 # 95 "/usr/include/stdlib.h" 3 4 typedef struct { int quot; int rem; } div_t; typedef struct { long int quot; long int rem; } ldiv_t; __extension__ typedef struct { long long int quot; long long int rem; } lldiv_t; # 139 "/usr/include/stdlib.h" 3 4 extern size_t __ctype_get_mb_cur_max (void) throw () ; extern double atof (const char *__nptr) throw () __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1))) ; extern int atoi (const char *__nptr) throw () __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1))) ; extern long int atol (const char *__nptr) throw () __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1))) ; __extension__ extern long long int atoll (const char *__nptr) throw () __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1))) ; extern double strtod (const char *__restrict __nptr, char **__restrict __endptr) throw () __attribute__ ((__nonnull__ (1))); extern float strtof (const char *__restrict __nptr, char **__restrict __endptr) throw () __attribute__ ((__nonnull__ (1))); extern long double strtold (const char *__restrict __nptr, char **__restrict __endptr) throw () __attribute__ ((__nonnull__ (1))); extern long int strtol (const char *__restrict __nptr, char **__restrict __endptr, int __base) throw () __attribute__ ((__nonnull__ (1))); extern unsigned long int strtoul (const char *__restrict __nptr, char **__restrict __endptr, int __base) throw () __attribute__ ((__nonnull__ (1))); __extension__ extern long long int strtoq (const char *__restrict __nptr, char **__restrict __endptr, int __base) throw () __attribute__ ((__nonnull__ (1))); __extension__ extern unsigned long long int strtouq (const char *__restrict __nptr, char **__restrict __endptr, int __base) throw () __attribute__ ((__nonnull__ (1))); __extension__ extern long long int strtoll (const char *__restrict __nptr, char **__restrict __endptr, int __base) throw () __attribute__ ((__nonnull__ (1))); __extension__ extern unsigned long long int strtoull (const char *__restrict __nptr, char **__restrict __endptr, int __base) throw () __attribute__ ((__nonnull__ (1))); # 235 "/usr/include/stdlib.h" 3 4 # 1 "/usr/include/xlocale.h" 1 3 4 # 27 "/usr/include/xlocale.h" 3 4 typedef struct __locale_struct { struct __locale_data *__locales[13]; const unsigned short int *__ctype_b; const int *__ctype_tolower; const int *__ctype_toupper; const char *__names[13]; } *__locale_t; typedef __locale_t locale_t; # 236 "/usr/include/stdlib.h" 2 3 4 extern long int strtol_l (const char *__restrict __nptr, char **__restrict __endptr, int __base, __locale_t __loc) throw () __attribute__ ((__nonnull__ (1, 4))); extern unsigned long int strtoul_l (const char *__restrict __nptr, char **__restrict __endptr, int __base, __locale_t __loc) throw () __attribute__ ((__nonnull__ (1, 4))); __extension__ extern long long int strtoll_l (const char *__restrict __nptr, char **__restrict __endptr, int __base, __locale_t __loc) throw () __attribute__ ((__nonnull__ (1, 4))); __extension__ extern unsigned long long int strtoull_l (const char *__restrict __nptr, char **__restrict __endptr, int __base, __locale_t __loc) throw () __attribute__ ((__nonnull__ (1, 4))); extern double strtod_l (const char *__restrict __nptr, char **__restrict __endptr, __locale_t __loc) throw () __attribute__ ((__nonnull__ (1, 3))); extern float strtof_l (const char *__restrict __nptr, char **__restrict __endptr, __locale_t __loc) throw () __attribute__ ((__nonnull__ (1, 3))); extern long double strtold_l (const char *__restrict __nptr, char **__restrict __endptr, __locale_t __loc) throw () __attribute__ ((__nonnull__ (1, 3))); # 305 "/usr/include/stdlib.h" 3 4 extern char *l64a (long int __n) throw () ; extern long int a64l (const char *__s) throw () __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1))) ; # 1 "/usr/include/x86_64-linux-gnu/sys/types.h" 1 3 4 # 27 "/usr/include/x86_64-linux-gnu/sys/types.h" 3 4 extern "C" { typedef __u_char u_char; typedef __u_short u_short; typedef __u_int u_int; typedef __u_long u_long; typedef __quad_t quad_t; typedef __u_quad_t u_quad_t; typedef __fsid_t fsid_t; typedef __loff_t loff_t; typedef __ino_t ino_t; typedef __ino64_t ino64_t; typedef __dev_t dev_t; typedef __gid_t gid_t; typedef __mode_t mode_t; typedef __nlink_t nlink_t; typedef __uid_t uid_t; typedef __off_t off_t; typedef __off64_t off64_t; typedef __pid_t pid_t; typedef __id_t id_t; typedef __ssize_t ssize_t; typedef __daddr_t daddr_t; typedef __caddr_t caddr_t; typedef __key_t key_t; # 132 "/usr/include/x86_64-linux-gnu/sys/types.h" 3 4 # 1 "/usr/include/time.h" 1 3 4 # 57 "/usr/include/time.h" 3 4 typedef __clock_t clock_t; # 73 "/usr/include/time.h" 3 4 typedef __time_t time_t; # 91 "/usr/include/time.h" 3 4 typedef __clockid_t clockid_t; # 103 "/usr/include/time.h" 3 4 typedef __timer_t timer_t; # 133 "/usr/include/x86_64-linux-gnu/sys/types.h" 2 3 4 typedef __useconds_t useconds_t; typedef __suseconds_t suseconds_t; # 1 "/usr/lib/gcc/x86_64-linux-gnu/4.7/include/stddef.h" 1 3 4 # 147 "/usr/include/x86_64-linux-gnu/sys/types.h" 2 3 4 typedef unsigned long int ulong; typedef unsigned short int ushort; typedef unsigned int uint; # 194 "/usr/include/x86_64-linux-gnu/sys/types.h" 3 4 typedef int int8_t __attribute__ ((__mode__ (__QI__))); typedef int int16_t __attribute__ ((__mode__ (__HI__))); typedef int int32_t __attribute__ ((__mode__ (__SI__))); typedef int int64_t __attribute__ ((__mode__ (__DI__))); typedef unsigned int u_int8_t __attribute__ ((__mode__ (__QI__))); typedef unsigned int u_int16_t __attribute__ ((__mode__ (__HI__))); typedef unsigned int u_int32_t __attribute__ ((__mode__ (__SI__))); typedef unsigned int u_int64_t __attribute__ ((__mode__ (__DI__))); typedef int register_t __attribute__ ((__mode__ (__word__))); # 219 "/usr/include/x86_64-linux-gnu/sys/types.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/sys/select.h" 1 3 4 # 30 "/usr/include/x86_64-linux-gnu/sys/select.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/select.h" 1 3 4 # 22 "/usr/include/x86_64-linux-gnu/bits/select.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/wordsize.h" 1 3 4 # 23 "/usr/include/x86_64-linux-gnu/bits/select.h" 2 3 4 # 31 "/usr/include/x86_64-linux-gnu/sys/select.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/sigset.h" 1 3 4 # 23 "/usr/include/x86_64-linux-gnu/bits/sigset.h" 3 4 typedef int __sig_atomic_t; typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; # 34 "/usr/include/x86_64-linux-gnu/sys/select.h" 2 3 4 typedef __sigset_t sigset_t; # 1 "/usr/include/time.h" 1 3 4 # 120 "/usr/include/time.h" 3 4 struct timespec { __time_t tv_sec; __syscall_slong_t tv_nsec; }; # 44 "/usr/include/x86_64-linux-gnu/sys/select.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/time.h" 1 3 4 # 30 "/usr/include/x86_64-linux-gnu/bits/time.h" 3 4 struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; # 46 "/usr/include/x86_64-linux-gnu/sys/select.h" 2 3 4 # 54 "/usr/include/x86_64-linux-gnu/sys/select.h" 3 4 typedef long int __fd_mask; # 64 "/usr/include/x86_64-linux-gnu/sys/select.h" 3 4 typedef struct { __fd_mask fds_bits[1024 / (8 * (int) sizeof (__fd_mask))]; } fd_set; typedef __fd_mask fd_mask; # 96 "/usr/include/x86_64-linux-gnu/sys/select.h" 3 4 extern "C" { # 106 "/usr/include/x86_64-linux-gnu/sys/select.h" 3 4 extern int select (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, struct timeval *__restrict __timeout); # 118 "/usr/include/x86_64-linux-gnu/sys/select.h" 3 4 extern int pselect (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, const struct timespec *__restrict __timeout, const __sigset_t *__restrict __sigmask); # 131 "/usr/include/x86_64-linux-gnu/sys/select.h" 3 4 } # 220 "/usr/include/x86_64-linux-gnu/sys/types.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/sys/sysmacros.h" 1 3 4 # 29 "/usr/include/x86_64-linux-gnu/sys/sysmacros.h" 3 4 extern "C" { __extension__ extern unsigned int gnu_dev_major (unsigned long long int __dev) throw () __attribute__ ((__const__)); __extension__ extern unsigned int gnu_dev_minor (unsigned long long int __dev) throw () __attribute__ ((__const__)); __extension__ extern unsigned long long int gnu_dev_makedev (unsigned int __major, unsigned int __minor) throw () __attribute__ ((__const__)); # 63 "/usr/include/x86_64-linux-gnu/sys/sysmacros.h" 3 4 } # 223 "/usr/include/x86_64-linux-gnu/sys/types.h" 2 3 4 typedef __blksize_t blksize_t; typedef __blkcnt_t blkcnt_t; typedef __fsblkcnt_t fsblkcnt_t; typedef __fsfilcnt_t fsfilcnt_t; # 262 "/usr/include/x86_64-linux-gnu/sys/types.h" 3 4 typedef __blkcnt64_t blkcnt64_t; typedef __fsblkcnt64_t fsblkcnt64_t; typedef __fsfilcnt64_t fsfilcnt64_t; # 1 "/usr/include/x86_64-linux-gnu/bits/pthreadtypes.h" 1 3 4 # 21 "/usr/include/x86_64-linux-gnu/bits/pthreadtypes.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/wordsize.h" 1 3 4 # 22 "/usr/include/x86_64-linux-gnu/bits/pthreadtypes.h" 2 3 4 # 60 "/usr/include/x86_64-linux-gnu/bits/pthreadtypes.h" 3 4 typedef unsigned long int pthread_t; union pthread_attr_t { char __size[56]; long int __align; }; typedef union pthread_attr_t pthread_attr_t; typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; # 90 "/usr/include/x86_64-linux-gnu/bits/pthreadtypes.h" 3 4 typedef union { struct __pthread_mutex_s { int __lock; unsigned int __count; int __owner; unsigned int __nusers; int __kind; int __spins; __pthread_list_t __list; # 115 "/usr/include/x86_64-linux-gnu/bits/pthreadtypes.h" 3 4 } __data; char __size[40]; long int __align; } pthread_mutex_t; typedef union { char __size[4]; int __align; } pthread_mutexattr_t; typedef union { struct { int __lock; unsigned int __futex; __extension__ unsigned long long int __total_seq; __extension__ unsigned long long int __wakeup_seq; __extension__ unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; __extension__ long long int __align; } pthread_cond_t; typedef union { char __size[4]; int __align; } pthread_condattr_t; typedef unsigned int pthread_key_t; typedef int pthread_once_t; typedef union { struct { int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; unsigned int __flags; } __data; # 202 "/usr/include/x86_64-linux-gnu/bits/pthreadtypes.h" 3 4 char __size[56]; long int __align; } pthread_rwlock_t; typedef union { char __size[8]; long int __align; } pthread_rwlockattr_t; typedef volatile int pthread_spinlock_t; typedef union { char __size[32]; long int __align; } pthread_barrier_t; typedef union { char __size[4]; int __align; } pthread_barrierattr_t; # 271 "/usr/include/x86_64-linux-gnu/sys/types.h" 2 3 4 } # 315 "/usr/include/stdlib.h" 2 3 4 extern long int random (void) throw (); extern void srandom (unsigned int __seed) throw (); extern char *initstate (unsigned int __seed, char *__statebuf, size_t __statelen) throw () __attribute__ ((__nonnull__ (2))); extern char *setstate (char *__statebuf) throw () __attribute__ ((__nonnull__ (1))); struct random_data { int32_t *fptr; int32_t *rptr; int32_t *state; int rand_type; int rand_deg; int rand_sep; int32_t *end_ptr; }; extern int random_r (struct random_data *__restrict __buf, int32_t *__restrict __result) throw () __attribute__ ((__nonnull__ (1, 2))); extern int srandom_r (unsigned int __seed, struct random_data *__buf) throw () __attribute__ ((__nonnull__ (2))); extern int initstate_r (unsigned int __seed, char *__restrict __statebuf, size_t __statelen, struct random_data *__restrict __buf) throw () __attribute__ ((__nonnull__ (2, 4))); extern int setstate_r (char *__restrict __statebuf, struct random_data *__restrict __buf) throw () __attribute__ ((__nonnull__ (1, 2))); extern int rand (void) throw (); extern void srand (unsigned int __seed) throw (); extern int rand_r (unsigned int *__seed) throw (); extern double drand48 (void) throw (); extern double erand48 (unsigned short int __xsubi[3]) throw () __attribute__ ((__nonnull__ (1))); extern long int lrand48 (void) throw (); extern long int nrand48 (unsigned short int __xsubi[3]) throw () __attribute__ ((__nonnull__ (1))); extern long int mrand48 (void) throw (); extern long int jrand48 (unsigned short int __xsubi[3]) throw () __attribute__ ((__nonnull__ (1))); extern void srand48 (long int __seedval) throw (); extern unsigned short int *seed48 (unsigned short int __seed16v[3]) throw () __attribute__ ((__nonnull__ (1))); extern void lcong48 (unsigned short int __param[7]) throw () __attribute__ ((__nonnull__ (1))); struct drand48_data { unsigned short int __x[3]; unsigned short int __old_x[3]; unsigned short int __c; unsigned short int __init; unsigned long long int __a; }; extern int drand48_r (struct drand48_data *__restrict __buffer, double *__restrict __result) throw () __attribute__ ((__nonnull__ (1, 2))); extern int erand48_r (unsigned short int __xsubi[3], struct drand48_data *__restrict __buffer, double *__restrict __result) throw () __attribute__ ((__nonnull__ (1, 2))); extern int lrand48_r (struct drand48_data *__restrict __buffer, long int *__restrict __result) throw () __attribute__ ((__nonnull__ (1, 2))); extern int nrand48_r (unsigned short int __xsubi[3], struct drand48_data *__restrict __buffer, long int *__restrict __result) throw () __attribute__ ((__nonnull__ (1, 2))); extern int mrand48_r (struct drand48_data *__restrict __buffer, long int *__restrict __result) throw () __attribute__ ((__nonnull__ (1, 2))); extern int jrand48_r (unsigned short int __xsubi[3], struct drand48_data *__restrict __buffer, long int *__restrict __result) throw () __attribute__ ((__nonnull__ (1, 2))); extern int srand48_r (long int __seedval, struct drand48_data *__buffer) throw () __attribute__ ((__nonnull__ (2))); extern int seed48_r (unsigned short int __seed16v[3], struct drand48_data *__buffer) throw () __attribute__ ((__nonnull__ (1, 2))); extern int lcong48_r (unsigned short int __param[7], struct drand48_data *__buffer) throw () __attribute__ ((__nonnull__ (1, 2))); extern void *malloc (size_t __size) throw () __attribute__ ((__malloc__)) ; extern void *calloc (size_t __nmemb, size_t __size) throw () __attribute__ ((__malloc__)) ; extern void *realloc (void *__ptr, size_t __size) throw () __attribute__ ((__warn_unused_result__)); extern void free (void *__ptr) throw (); extern void cfree (void *__ptr) throw (); # 1 "/usr/include/alloca.h" 1 3 4 # 24 "/usr/include/alloca.h" 3 4 # 1 "/usr/lib/gcc/x86_64-linux-gnu/4.7/include/stddef.h" 1 3 4 # 25 "/usr/include/alloca.h" 2 3 4 extern "C" { extern void *alloca (size_t __size) throw (); } # 492 "/usr/include/stdlib.h" 2 3 4 extern void *valloc (size_t __size) throw () __attribute__ ((__malloc__)) ; extern int posix_memalign (void **__memptr, size_t __alignment, size_t __size) throw () __attribute__ ((__nonnull__ (1))) ; extern void *aligned_alloc (size_t __alignment, size_t __size) throw () __attribute__ ((__malloc__, __alloc_size__ (2))); extern void abort (void) throw () __attribute__ ((__noreturn__)); extern int atexit (void (*__func) (void)) throw () __attribute__ ((__nonnull__ (1))); extern "C++" int at_quick_exit (void (*__func) (void)) throw () __asm ("at_quick_exit") __attribute__ ((__nonnull__ (1))); extern int on_exit (void (*__func) (int __status, void *__arg), void *__arg) throw () __attribute__ ((__nonnull__ (1))); extern void exit (int __status) throw () __attribute__ ((__noreturn__)); extern void quick_exit (int __status) throw () __attribute__ ((__noreturn__)); extern void _Exit (int __status) throw () __attribute__ ((__noreturn__)); extern char *getenv (const char *__name) throw () __attribute__ ((__nonnull__ (1))) ; extern char *secure_getenv (const char *__name) throw () __attribute__ ((__nonnull__ (1))) ; extern int putenv (char *__string) throw () __attribute__ ((__nonnull__ (1))); extern int setenv (const char *__name, const char *__value, int __replace) throw () __attribute__ ((__nonnull__ (2))); extern int unsetenv (const char *__name) throw () __attribute__ ((__nonnull__ (1))); extern int clearenv (void) throw (); # 605 "/usr/include/stdlib.h" 3 4 extern char *mktemp (char *__template) throw () __attribute__ ((__nonnull__ (1))); # 619 "/usr/include/stdlib.h" 3 4 extern int mkstemp (char *__template) __attribute__ ((__nonnull__ (1))) ; # 629 "/usr/include/stdlib.h" 3 4 extern int mkstemp64 (char *__template) __attribute__ ((__nonnull__ (1))) ; # 641 "/usr/include/stdlib.h" 3 4 extern int mkstemps (char *__template, int __suffixlen) __attribute__ ((__nonnull__ (1))) ; # 651 "/usr/include/stdlib.h" 3 4 extern int mkstemps64 (char *__template, int __suffixlen) __attribute__ ((__nonnull__ (1))) ; # 662 "/usr/include/stdlib.h" 3 4 extern char *mkdtemp (char *__template) throw () __attribute__ ((__nonnull__ (1))) ; # 673 "/usr/include/stdlib.h" 3 4 extern int mkostemp (char *__template, int __flags) __attribute__ ((__nonnull__ (1))) ; # 683 "/usr/include/stdlib.h" 3 4 extern int mkostemp64 (char *__template, int __flags) __attribute__ ((__nonnull__ (1))) ; # 693 "/usr/include/stdlib.h" 3 4 extern int mkostemps (char *__template, int __suffixlen, int __flags) __attribute__ ((__nonnull__ (1))) ; # 705 "/usr/include/stdlib.h" 3 4 extern int mkostemps64 (char *__template, int __suffixlen, int __flags) __attribute__ ((__nonnull__ (1))) ; extern int system (const char *__command) ; extern char *canonicalize_file_name (const char *__name) throw () __attribute__ ((__nonnull__ (1))) ; # 733 "/usr/include/stdlib.h" 3 4 extern char *realpath (const char *__restrict __name, char *__restrict __resolved) throw () ; typedef int (*__compar_fn_t) (const void *, const void *); typedef __compar_fn_t comparison_fn_t; typedef int (*__compar_d_fn_t) (const void *, const void *, void *); extern void *bsearch (const void *__key, const void *__base, size_t __nmemb, size_t __size, __compar_fn_t __compar) __attribute__ ((__nonnull__ (1, 2, 5))) ; extern void qsort (void *__base, size_t __nmemb, size_t __size, __compar_fn_t __compar) __attribute__ ((__nonnull__ (1, 4))); extern void qsort_r (void *__base, size_t __nmemb, size_t __size, __compar_d_fn_t __compar, void *__arg) __attribute__ ((__nonnull__ (1, 4))); extern int abs (int __x) throw () __attribute__ ((__const__)) ; extern long int labs (long int __x) throw () __attribute__ ((__const__)) ; __extension__ extern long long int llabs (long long int __x) throw () __attribute__ ((__const__)) ; extern div_t div (int __numer, int __denom) throw () __attribute__ ((__const__)) ; extern ldiv_t ldiv (long int __numer, long int __denom) throw () __attribute__ ((__const__)) ; __extension__ extern lldiv_t lldiv (long long int __numer, long long int __denom) throw () __attribute__ ((__const__)) ; # 807 "/usr/include/stdlib.h" 3 4 extern char *ecvt (double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign) throw () __attribute__ ((__nonnull__ (3, 4))) ; extern char *fcvt (double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign) throw () __attribute__ ((__nonnull__ (3, 4))) ; extern char *gcvt (double __value, int __ndigit, char *__buf) throw () __attribute__ ((__nonnull__ (3))) ; extern char *qecvt (long double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign) throw () __attribute__ ((__nonnull__ (3, 4))) ; extern char *qfcvt (long double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign) throw () __attribute__ ((__nonnull__ (3, 4))) ; extern char *qgcvt (long double __value, int __ndigit, char *__buf) throw () __attribute__ ((__nonnull__ (3))) ; extern int ecvt_r (double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign, char *__restrict __buf, size_t __len) throw () __attribute__ ((__nonnull__ (3, 4, 5))); extern int fcvt_r (double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign, char *__restrict __buf, size_t __len) throw () __attribute__ ((__nonnull__ (3, 4, 5))); extern int qecvt_r (long double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign, char *__restrict __buf, size_t __len) throw () __attribute__ ((__nonnull__ (3, 4, 5))); extern int qfcvt_r (long double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign, char *__restrict __buf, size_t __len) throw () __attribute__ ((__nonnull__ (3, 4, 5))); extern int mblen (const char *__s, size_t __n) throw () ; extern int mbtowc (wchar_t *__restrict __pwc, const char *__restrict __s, size_t __n) throw () ; extern int wctomb (char *__s, wchar_t __wchar) throw () ; extern size_t mbstowcs (wchar_t *__restrict __pwcs, const char *__restrict __s, size_t __n) throw (); extern size_t wcstombs (char *__restrict __s, const wchar_t *__restrict __pwcs, size_t __n) throw (); extern int rpmatch (const char *__response) throw () __attribute__ ((__nonnull__ (1))) ; # 895 "/usr/include/stdlib.h" 3 4 extern int getsubopt (char **__restrict __optionp, char *const *__restrict __tokens, char **__restrict __valuep) throw () __attribute__ ((__nonnull__ (1, 2, 3))) ; extern void setkey (const char *__key) throw () __attribute__ ((__nonnull__ (1))); extern int posix_openpt (int __oflag) ; extern int grantpt (int __fd) throw (); extern int unlockpt (int __fd) throw (); extern char *ptsname (int __fd) throw () ; extern int ptsname_r (int __fd, char *__buf, size_t __buflen) throw () __attribute__ ((__nonnull__ (2))); extern int getpt (void); extern int getloadavg (double __loadavg[], int __nelem) throw () __attribute__ ((__nonnull__ (1))); # 1 "/usr/include/x86_64-linux-gnu/bits/stdlib-float.h" 1 3 4 # 952 "/usr/include/stdlib.h" 2 3 4 # 964 "/usr/include/stdlib.h" 3 4 } # 67 "/usr/include/c++/4.7/cstdlib" 2 3 # 98 "/usr/include/c++/4.7/cstdlib" 3 namespace std __attribute__ ((__visibility__ ("default"))) { using ::div_t; using ::ldiv_t; using ::abort; using ::abs; using ::atexit; using ::atof; using ::atoi; using ::atol; using ::bsearch; using ::calloc; using ::div; using ::exit; using ::free; using ::getenv; using ::labs; using ::ldiv; using ::malloc; using ::mblen; using ::mbstowcs; using ::mbtowc; using ::qsort; using ::rand; using ::realloc; using ::srand; using ::strtod; using ::strtol; using ::strtoul; using ::system; using ::wcstombs; using ::wctomb; inline long abs(long __i) { return labs(__i); } inline ldiv_t div(long __i, long __j) { return ldiv(__i, __j); } } # 160 "/usr/include/c++/4.7/cstdlib" 3 namespace __gnu_cxx __attribute__ ((__visibility__ ("default"))) { using ::lldiv_t; using ::_Exit; inline long long abs(long long __x) { return __x >= 0 ? __x : -__x; } using ::llabs; inline lldiv_t div(long long __n, long long __d) { lldiv_t __q; __q.quot = __n / __d; __q.rem = __n % __d; return __q; } using ::lldiv; # 195 "/usr/include/c++/4.7/cstdlib" 3 using ::atoll; using ::strtoll; using ::strtoull; using ::strtof; using ::strtold; } namespace std { using ::__gnu_cxx::lldiv_t; using ::__gnu_cxx::_Exit; using ::__gnu_cxx::abs; using ::__gnu_cxx::llabs; using ::__gnu_cxx::div; using ::__gnu_cxx::lldiv; using ::__gnu_cxx::atoll; using ::__gnu_cxx::strtof; using ::__gnu_cxx::strtoll; using ::__gnu_cxx::strtoull; using ::__gnu_cxx::strtold; } # 3 "/tmp/petsc-U9YCMv/config.setCompilers/conftest.cc" 2 Popping language Cxx ================================================================================ TEST checkFortranCompiler from config.setCompilers(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/setCompilers.py:882) TESTING: checkFortranCompiler from config.setCompilers(config/BuildSystem/config/setCompilers.py:882) Locate a functional Fortran compiler Checking for program /home/hills/seska/packages/pdt/x86_64/bin/mpif90...not found Checking for program /home/hills/seska/packages/tau/x86_64/bin/mpif90...not found Checking for program /home/hills/seska/packages/petsc/bin/mpif90...not found Checking for program /home/hills/seska/packages/petsc/linux-gnu-cxx-opt/bin/mpif90...found Defined make macro "FC" to "mpif90" Pushing language FC sh: mpif90 -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers /tmp/petsc-U9YCMv/config.setCompilers/conftest.F Executing: mpif90 -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers /tmp/petsc-U9YCMv/config.setCompilers/conftest.F sh: Successful compile: Source: program main end sh: mpif90 -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers /tmp/petsc-U9YCMv/config.setCompilers/conftest.F Executing: mpif90 -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers /tmp/petsc-U9YCMv/config.setCompilers/conftest.F sh: Successful compile: Source: program main end Pushing language C Popping language C Pushing language CUDA Popping language CUDA Pushing language Cxx Popping language Cxx Pushing language FC Popping language FC Pushing language FC Popping language FC sh: mpif90 -o /tmp/petsc-U9YCMv/config.setCompilers/conftest /tmp/petsc-U9YCMv/config.setCompilers/conftest.o Executing: mpif90 -o /tmp/petsc-U9YCMv/config.setCompilers/conftest /tmp/petsc-U9YCMv/config.setCompilers/conftest.o sh: sh: mpif90 -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers /tmp/petsc-U9YCMv/config.setCompilers/conftest.F Executing: mpif90 -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers /tmp/petsc-U9YCMv/config.setCompilers/conftest.F sh: Successful compile: Source: program main end Pushing language FC Popping language FC sh: mpif90 -o /tmp/petsc-U9YCMv/config.setCompilers/conftest /tmp/petsc-U9YCMv/config.setCompilers/conftest.o Executing: mpif90 -o /tmp/petsc-U9YCMv/config.setCompilers/conftest /tmp/petsc-U9YCMv/config.setCompilers/conftest.o sh: Executing: /tmp/petsc-U9YCMv/config.setCompilers/conftest sh: /tmp/petsc-U9YCMv/config.setCompilers/conftest Executing: /tmp/petsc-U9YCMv/config.setCompilers/conftest sh: Popping language FC ================================================================================ TEST checkFortranComments from config.setCompilers(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/setCompilers.py:901) TESTING: checkFortranComments from config.setCompilers(config/BuildSystem/config/setCompilers.py:901) Make sure fortran comment "!" works Pushing language FC sh: mpif90 -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers /tmp/petsc-U9YCMv/config.setCompilers/conftest.F Executing: mpif90 -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers /tmp/petsc-U9YCMv/config.setCompilers/conftest.F sh: Successful compile: Source: ! comment program main end Fortran comments can use ! in column 1 Popping language FC ================================================================================ TEST checkPIC from config.setCompilers(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/setCompilers.py:964) TESTING: checkPIC from config.setCompilers(config/BuildSystem/config/setCompilers.py:964) Determine the PIC option for each compiler - There needs to be a test that checks that the functionality is actually working Pushing language C sh: tau_cc.sh --help Executing: tau_cc.sh --help sh: Usage: tau_compiler.sh -optVerbose Turn on verbose debugging message -optMemDbg Enable TAU's runtime memory debugger -optDetectMemoryLeaks Synonym for -optMemDbg -optPdtDir="" PDT architecture directory. Typically $(PDTDIR)/$(PDTARCHDIR) -optPdtF95Opts="" Options for Fortran parser in PDT (f95parse) -optPdtF95Reset="" Reset options to the Fortran parser to the given list -optPdtCOpts="" Options for C parser in PDT (cparse). Typically $(TAU_MPI_INCLUDE) $(TAU_INCLUDE) $(TAU_DEFS) -optPdtCReset="" Reset options to the C parser to the given list -optPdtCxxOpts="" Options for C++ parser in PDT (cxxparse). Typically $(TAU_MPI_INCLUDE) $(TAU_INCLUDE) $(TAU_DEFS) -optPdtCxxReset="" Reset options to the C++ parser to the given list -optPdtF90Parser="" Specify a different Fortran parser. For e.g., f90parse instead of f95parse -optPdtGnuFortranParser Specify the GNU gfortran PDT parser gfparse instead of f95parse -optPdtCleanscapeParser Specify the Cleanscape Fortran parser -optPdtUser="" Optional arguments for parsing source code -optTauInstr="" Specify location of tau_instrumentor. Typically $(TAUROOT)/$(CONFIG_ARCH)/bin/tau_instrumentor -optPreProcess Preprocess the source code before parsing. Uses /usr/bin/cpp -P by default. -optContinueBeforeOMP Insert a CONTINUE statement before !$OMP directives. -optCPP="" Specify an alternative preprocessor and pre-process the sources. -optCPPOpts="" Specify additional options to the C pre-processor. -optCPPReset="" Reset C preprocessor options to the specified list. -optTauSelectFile="" Specify selective instrumentation file for tau_instrumentor. -optTauWrapFile="" Specify path to the link_options.tau file generated by tau_wrap -optTrackIO Specify wrapping of POSIX I/O calls at link time. -optTrackUPCR Specify wrapping of UPC runtime calls at link time. -optTrackDMAPP Specify wrapping of Cray DMAPP library calls at link time. -optTrackPthread Specify wrapping of Pthread library calls at link time. -optTrackGOMP Specify wrapping of GOMP library calls at link time. (default) -optNoTrackGOMP Disable wrapping of GOMP library calls at link time. -optTrackMPCThread Specify wrapping of MPC Thread library calls at link time. -optWrappersDir="" Specify the location of the link wrappers directory. -optPDBFile="" Specify PDB file for tau_instrumentor. Skips parsing stage. -optTau="" Specify options for tau_instrumentor -optCompile="" Options passed to the compiler by the user. -optTauDefs="" Options passed to the compiler by TAU. Typically $(TAU_DEFS) -optTauIncludes="" Options passed to the compiler by TAU. Typically $(TAU_MPI_INCLUDE) $(TAU_INCLUDE) -optIncludeMemory="" Flags for replacement of malloc/free. Typically -I$(TAU_DIR)/include/TauMemory -optReset="" Reset options to the compiler to the given list -optLinking="" Options passed to the linker. Typically $(TAU_MPI_FLIBS) $(TAU_LIBS) $(TAU_CXXLIBS) -optLinkReset="" Reset options to the linker to the given list -optLinkPreserveLib="" Libraries which TAU should preserve the order of on the link line see "Moving these libraries to the end of the link line:". Default: none. -optTauCC="" Specifies the C compiler used by TAU -optTauUseCXXForC Specifies the use of a C++ compiler for compiling C code -optUseReturnFix Specifies the use of a bug fix with ROSE parser using EDG v3.x -optOpariTool="" Specifies the location of the Opari tool -optLinkOnly Disable instrumentation during compilation, do link in the TAU libs -optOpariDir="" Specifies the location of the Opari directory -optOpariOpts="" Specifies optional arguments to the Opari tool -optOpariNoInit="" Do not initlize the POMP2 regions. -optOpariLibs="" Specifies the libraries that have POMP2 regions. (Overrides optOpariNoInit -optOpariReset="" Resets options passed to the Opari tool -optOpari2Tool="" Specifies the location of the Opari tool -optOpari2ConfigTool="" Specifies the location of the Opari tool -optOpari2Opts="" Specifies optional arguments to the Opari tool -optOpari2Reset="" Resets options passed to the Opari tool -optOpari2Dir="" Specifies the location of the Opari directory -optNoMpi Removes -l*mpi* libraries during linking -optMpi Does not remove -l*mpi* libraries during linking (default) -optNoRevert Exit on error. Does not revert to the original compilation rule on error. -optRevert Revert to the original compilation rule on error (default). -optNoCompInst Do not revert to compiler instrumentation if source instrumentation fails. -optKeepFiles Does not remove intermediate .pdb and .inst.* files -optAppCC="" Specifies the fallback C compiler. -optAppCXX="" Specifies the fallback C++ compiler. -optAppF90="" Specifies the fallback F90 compiler. -optShared Use shared library version of TAU. -optCompInst Use compiler-based instrumentation. -optPDTInst Use PDT-based instrumentation. -optHeaderInst Enable instrumentation of headers -optDisableHeaderInst Disable instrumentation of headers -optFixHashIf -optMICOffload Links code for Intel MIC offloading, requires both host and MIC TAU libraries Trying C compiler flag -PIC sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers /tmp/petsc-U9YCMv/config.setCompilers/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers /tmp/petsc-U9YCMv/config.setCompilers/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.setCompilers/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.setCompilers/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.setCompilers/conftest -PIC /tmp/petsc-U9YCMv/config.setCompilers/conftest.o Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.setCompilers/conftest -PIC /tmp/petsc-U9YCMv/config.setCompilers/conftest.o sh: Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.setCompilers/conftest -PIC /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.setCompilers/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.setCompilers/conftest -PIC /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.setCompilers/conftest -PIC /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.setCompilers/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.setCompilers/conftest -PIC /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt Possible ERROR while running linker: gcc: error: unrecognized command line option ‘-PIC’ gcc: error: unrecognized command line option ‘-PIC’ make: *** [all] Error 1 output: Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.setCompilers/conftest -PIC /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.setCompilers/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.setCompilers/conftest -PIC /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.setCompilers/conftest -PIC /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.setCompilers/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.setCompilers/conftest -PIC /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt ret = 256 error message = {gcc: error: unrecognized command line option ‘-PIC’ gcc: error: unrecognized command line option ‘-PIC’ make: *** [all] Error 1 } Pushing language C Popping language C in tau_cc.sh -o /tmp/petsc-U9YCMv/config.setCompilers/conftest -PIC /tmp/petsc-U9YCMv/config.setCompilers/conftest.o Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Rejecting linker flag -PIC due to nonzero status from link Rejecting C linker flag -PIC due to Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.setCompilers/conftest -PIC /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.setCompilers/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.setCompilers/conftest -PIC /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.setCompilers/conftest -PIC /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.setCompilers/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.setCompilers/conftest -PIC /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt gcc: error: unrecognized command line option ‘-PIC’ gcc: error: unrecognized command line option ‘-PIC’ make: *** [all] Error 1 Rejected C compiler flag -PIC because linker cannot handle it Trying C compiler flag -fPIC sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers /tmp/petsc-U9YCMv/config.setCompilers/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers /tmp/petsc-U9YCMv/config.setCompilers/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.setCompilers/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.setCompilers/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.setCompilers/conftest -fPIC /tmp/petsc-U9YCMv/config.setCompilers/conftest.o Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.setCompilers/conftest -fPIC /tmp/petsc-U9YCMv/config.setCompilers/conftest.o sh: Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.setCompilers/conftest -fPIC /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt Valid C linker flag -fPIC Adding C compiler flag -fPIC sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -fPIC /tmp/petsc-U9YCMv/config.setCompilers/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -fPIC /tmp/petsc-U9YCMv/config.setCompilers/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.setCompilers/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.setCompilers/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Added C compiler flag -fPIC Popping language C Pushing language Cxx sh: mpicxx --help Executing: mpicxx --help sh: Usage: g++ [options] file... Options: -pass-exit-codes Exit with highest error code from a phase --help Display this information --target-help Display target specific command line options --help={common|optimizers|params|target|warnings|[^]{joined|separate|undocumented}}[,...] Display specific types of command line options (Use '-v --help' to display command line options of sub-processes) --version Display compiler version information -dumpspecs Display all of the built in spec strings -dumpversion Display the version of the compiler -dumpmachine Display the compiler's target processor -print-search-dirs Display the directories in the compiler's search path -print-libgcc-file-name Display the name of the compiler's companion library -print-file-name= Display the full path to library -print-prog-name= Display the full path to compiler component -print-multiarch Display the target's normalized GNU triplet, used as a component in the library path -print-multi-directory Display the root directory for versions of libgcc -print-multi-lib Display the mapping between command line options and multiple library search directories -print-multi-os-directory Display the relative path to OS libraries -print-sysroot Display the target libraries directory -print-sysroot-headers-suffix Display the sysroot suffix used to find headers -Wa, Pass comma-separated on to the assembler -Wp, Pass comma-separated on to the preprocessor -Wl, Pass comma-separated on to the linker -Xassembler Pass on to the assembler -Xpreprocessor Pass on to the preprocessor -Xlinker Pass on to the linker -save-temps Do not delete intermediate files -save-temps= Do not delete intermediate files -no-canonical-prefixes Do not canonicalize paths when building relative prefixes to other gcc components -pipe Use pipes rather than intermediate files -time Time the execution of each subprocess -specs= Override built-in specs with the contents of -std= Assume that the input sources are for --sysroot= Use as the root directory for headers and libraries -B Add to the compiler's search paths -v Display the programs invoked by the compiler -### Like -v but options quoted and commands not executed -E Preprocess only; do not compile, assemble or link -S Compile only; do not assemble or link -c Compile and assemble, but do not link -o Place the output into -pie Create a position independent executable -shared Create a shared library -x Specify the language of the following input files Permissible languages include: c c++ assembler none 'none' means revert to the default behavior of guessing the language based on the file's extension Options starting with -g, -f, -m, -O, -W, or --param are automatically passed on to the various sub-processes invoked by g++. In order to pass other options on to these processes the -W options must be used. For bug reporting instructions, please see: . Trying Cxx compiler flag -fPIC sh: mpicxx -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers /tmp/petsc-U9YCMv/config.setCompilers/conftest.cc Executing: mpicxx -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers /tmp/petsc-U9YCMv/config.setCompilers/conftest.cc sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language CXX Popping language CXX sh: mpicxx -o /tmp/petsc-U9YCMv/config.setCompilers/conftest -fPIC /tmp/petsc-U9YCMv/config.setCompilers/conftest.o Executing: mpicxx -o /tmp/petsc-U9YCMv/config.setCompilers/conftest -fPIC /tmp/petsc-U9YCMv/config.setCompilers/conftest.o sh: Valid Cxx linker flag -fPIC Adding Cxx compiler flag -fPIC sh: mpicxx -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -fPIC /tmp/petsc-U9YCMv/config.setCompilers/conftest.cc Executing: mpicxx -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -fPIC /tmp/petsc-U9YCMv/config.setCompilers/conftest.cc sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Added Cxx compiler flag -fPIC Popping language Cxx Pushing language FC sh: mpif90 --help Executing: mpif90 --help sh: Usage: gfortran [options] file... Options: -pass-exit-codes Exit with highest error code from a phase --help Display this information --target-help Display target specific command line options --help={common|optimizers|params|target|warnings|[^]{joined|separate|undocumented}}[,...] Display specific types of command line options (Use '-v --help' to display command line options of sub-processes) --version Display compiler version information -dumpspecs Display all of the built in spec strings -dumpversion Display the version of the compiler -dumpmachine Display the compiler's target processor -print-search-dirs Display the directories in the compiler's search path -print-libgcc-file-name Display the name of the compiler's companion library -print-file-name= Display the full path to library -print-prog-name= Display the full path to compiler component -print-multiarch Display the target's normalized GNU triplet, used as a component in the library path -print-multi-directory Display the root directory for versions of libgcc -print-multi-lib Display the mapping between command line options and multiple library search directories -print-multi-os-directory Display the relative path to OS libraries -print-sysroot Display the target libraries directory -print-sysroot-headers-suffix Display the sysroot suffix used to find headers -Wa, Pass comma-separated on to the assembler -Wp, Pass comma-separated on to the preprocessor -Wl, Pass comma-separated on to the linker -Xassembler Pass on to the assembler -Xpreprocessor Pass on to the preprocessor -Xlinker Pass on to the linker -save-temps Do not delete intermediate files -save-temps= Do not delete intermediate files -no-canonical-prefixes Do not canonicalize paths when building relative prefixes to other gcc components -pipe Use pipes rather than intermediate files -time Time the execution of each subprocess -specs= Override built-in specs with the contents of -std= Assume that the input sources are for --sysroot= Use as the root directory for headers and libraries -B Add to the compiler's search paths -v Display the programs invoked by the compiler -### Like -v but options quoted and commands not executed -E Preprocess only; do not compile, assemble or link -S Compile only; do not assemble or link -c Compile and assemble, but do not link -o Place the output into -pie Create a position independent executable -shared Create a shared library -x Specify the language of the following input files Permissible languages include: c c++ assembler none 'none' means revert to the default behavior of guessing the language based on the file's extension Options starting with -g, -f, -m, -O, -W, or --param are automatically passed on to the various sub-processes invoked by gfortran. In order to pass other options on to these processes the -W options must be used. For bug reporting instructions, please see: . Trying FC compiler flag -fPIC sh: mpif90 -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers /tmp/petsc-U9YCMv/config.setCompilers/conftest.F Executing: mpif90 -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers /tmp/petsc-U9YCMv/config.setCompilers/conftest.F sh: Successful compile: Source: program main end Pushing language FC Popping language FC sh: mpif90 -o /tmp/petsc-U9YCMv/config.setCompilers/conftest -fPIC /tmp/petsc-U9YCMv/config.setCompilers/conftest.o Executing: mpif90 -o /tmp/petsc-U9YCMv/config.setCompilers/conftest -fPIC /tmp/petsc-U9YCMv/config.setCompilers/conftest.o sh: Valid FC linker flag -fPIC Adding FC compiler flag -fPIC sh: mpif90 -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -fPIC /tmp/petsc-U9YCMv/config.setCompilers/conftest.F Executing: mpif90 -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -fPIC /tmp/petsc-U9YCMv/config.setCompilers/conftest.F sh: Successful compile: Source: program main end Added FC compiler flag -fPIC Popping language FC ================================================================================ TEST checkLargeFileIO from config.setCompilers(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/setCompilers.py:998) TESTING: checkLargeFileIO from config.setCompilers(config/BuildSystem/config/setCompilers.py:998) ================================================================================ TEST checkArchiver from config.setCompilers(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/setCompilers.py:1097) TESTING: checkArchiver from config.setCompilers(config/BuildSystem/config/setCompilers.py:1097) Check that the archiver exists and can make a library usable by the compiler Pushing language C sh: ar -V Executing: ar -V sh: GNU ar (GNU Binutils for Ubuntu) 2.23.2 Copyright 2012 Free Software Foundation, Inc. This program is free software; you may redistribute it under the terms of the GNU General Public License version 3 or (at your option) any later version. This program has absolutely no warranty. sh: ar -V Executing: ar -V sh: GNU ar (GNU Binutils for Ubuntu) 2.23.2 Copyright 2012 Free Software Foundation, Inc. This program is free software; you may redistribute it under the terms of the GNU General Public License version 3 or (at your option) any later version. This program has absolutely no warranty. Defined make macro "FAST_AR_FLAGS" to "Scq" sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -fPIC /tmp/petsc-U9YCMv/config.setCompilers/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -fPIC /tmp/petsc-U9YCMv/config.setCompilers/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.setCompilers/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.setCompilers/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" int foo(int a) { return a+1; } Checking for program /home/hills/seska/packages/pdt/x86_64/bin/ar...not found Checking for program /home/hills/seska/packages/tau/x86_64/bin/ar...not found Checking for program /home/hills/seska/packages/petsc/bin/ar...not found Checking for program /home/hills/seska/packages/petsc/linux-gnu-cxx-opt/bin/ar...not found Checking for program /home/hills/seska/packages/openmpi/bin/ar...not found Checking for program /home/hills/bin/ar...not found Checking for program /home/hills/seska/bin/ar...not found Checking for program /home/hills/seska/packages/gid/ar...not found Checking for program /home/hills/seska/packages/petsc/linux-gnu-cxx-opt/bin/ar...not found Checking for program /usr/lib/lightdm/lightdm/ar...not found Checking for program /usr/local/sbin/ar...not found Checking for program /usr/local/bin/ar...not found Checking for program /usr/sbin/ar...not found Checking for program /usr/bin/ar...found Defined make macro "AR" to "/usr/bin/ar" Checking for program /home/hills/seska/packages/pdt/x86_64/bin/ranlib...not found Checking for program /home/hills/seska/packages/tau/x86_64/bin/ranlib...not found Checking for program /home/hills/seska/packages/petsc/bin/ranlib...not found Checking for program /home/hills/seska/packages/petsc/linux-gnu-cxx-opt/bin/ranlib...not found Checking for program /home/hills/seska/packages/openmpi/bin/ranlib...not found Checking for program /home/hills/bin/ranlib...not found Checking for program /home/hills/seska/bin/ranlib...not found Checking for program /home/hills/seska/packages/gid/ranlib...not found Checking for program /home/hills/seska/packages/petsc/linux-gnu-cxx-opt/bin/ranlib...not found Checking for program /usr/lib/lightdm/lightdm/ranlib...not found Checking for program /usr/local/sbin/ranlib...not found Checking for program /usr/local/bin/ranlib...not found Checking for program /usr/sbin/ranlib...not found Checking for program /usr/bin/ranlib...found Defined make macro "RANLIB" to "/usr/bin/ranlib -c" sh: /usr/bin/ar cr /tmp/petsc-U9YCMv/config.setCompilers/libconf1.a /tmp/petsc-U9YCMv/config.setCompilers/conf1.o Executing: /usr/bin/ar cr /tmp/petsc-U9YCMv/config.setCompilers/libconf1.a /tmp/petsc-U9YCMv/config.setCompilers/conf1.o sh: sh: /usr/bin/ranlib -c /tmp/petsc-U9YCMv/config.setCompilers/libconf1.a Executing: /usr/bin/ranlib -c /tmp/petsc-U9YCMv/config.setCompilers/libconf1.a sh: Possible ERROR while running ranlib: error message = {/usr/bin/ranlib: invalid option -- 'c' } Ranlib is not functional with your archiver. Try --with-ranlib=true if ranlib is unnecessary. sh: ar -V Executing: ar -V sh: GNU ar (GNU Binutils for Ubuntu) 2.23.2 Copyright 2012 Free Software Foundation, Inc. This program is free software; you may redistribute it under the terms of the GNU General Public License version 3 or (at your option) any later version. This program has absolutely no warranty. sh: ar -V Executing: ar -V sh: GNU ar (GNU Binutils for Ubuntu) 2.23.2 Copyright 2012 Free Software Foundation, Inc. This program is free software; you may redistribute it under the terms of the GNU General Public License version 3 or (at your option) any later version. This program has absolutely no warranty. Defined make macro "FAST_AR_FLAGS" to "Scq" sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -fPIC /tmp/petsc-U9YCMv/config.setCompilers/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -fPIC /tmp/petsc-U9YCMv/config.setCompilers/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.setCompilers/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.setCompilers/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" int foo(int a) { return a+1; } Checking for program /home/hills/seska/packages/pdt/x86_64/bin/ar...not found Checking for program /home/hills/seska/packages/tau/x86_64/bin/ar...not found Checking for program /home/hills/seska/packages/petsc/bin/ar...not found Checking for program /home/hills/seska/packages/petsc/linux-gnu-cxx-opt/bin/ar...not found Checking for program /home/hills/seska/packages/openmpi/bin/ar...not found Checking for program /home/hills/bin/ar...not found Checking for program /home/hills/seska/bin/ar...not found Checking for program /home/hills/seska/packages/gid/ar...not found Checking for program /home/hills/seska/packages/petsc/linux-gnu-cxx-opt/bin/ar...not found Checking for program /usr/lib/lightdm/lightdm/ar...not found Checking for program /usr/local/sbin/ar...not found Checking for program /usr/local/bin/ar...not found Checking for program /usr/sbin/ar...not found Checking for program /usr/bin/ar...found Defined make macro "AR" to "/usr/bin/ar" Checking for program /home/hills/seska/packages/pdt/x86_64/bin/ranlib...not found Checking for program /home/hills/seska/packages/tau/x86_64/bin/ranlib...not found Checking for program /home/hills/seska/packages/petsc/bin/ranlib...not found Checking for program /home/hills/seska/packages/petsc/linux-gnu-cxx-opt/bin/ranlib...not found Checking for program /home/hills/seska/packages/openmpi/bin/ranlib...not found Checking for program /home/hills/bin/ranlib...not found Checking for program /home/hills/seska/bin/ranlib...not found Checking for program /home/hills/seska/packages/gid/ranlib...not found Checking for program /home/hills/seska/packages/petsc/linux-gnu-cxx-opt/bin/ranlib...not found Checking for program /usr/lib/lightdm/lightdm/ranlib...not found Checking for program /usr/local/sbin/ranlib...not found Checking for program /usr/local/bin/ranlib...not found Checking for program /usr/sbin/ranlib...not found Checking for program /usr/bin/ranlib...found Defined make macro "RANLIB" to "/usr/bin/ranlib" sh: /usr/bin/ar cr /tmp/petsc-U9YCMv/config.setCompilers/libconf1.a /tmp/petsc-U9YCMv/config.setCompilers/conf1.o Executing: /usr/bin/ar cr /tmp/petsc-U9YCMv/config.setCompilers/libconf1.a /tmp/petsc-U9YCMv/config.setCompilers/conf1.o sh: sh: /usr/bin/ranlib /tmp/petsc-U9YCMv/config.setCompilers/libconf1.a Executing: /usr/bin/ranlib /tmp/petsc-U9YCMv/config.setCompilers/libconf1.a sh: sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -fPIC /tmp/petsc-U9YCMv/config.setCompilers/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -fPIC /tmp/petsc-U9YCMv/config.setCompilers/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.setCompilers/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.setCompilers/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" extern int foo(int); int main() { int b = foo(1); if (b); ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.setCompilers/conftest -fPIC /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -L/tmp/petsc-U9YCMv/config.setCompilers -lconf1 Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.setCompilers/conftest -fPIC /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -L/tmp/petsc-U9YCMv/config.setCompilers -lconf1 sh: Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.setCompilers/conftest -fPIC /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -L/tmp/petsc-U9YCMv/config.setCompilers -lconf1 -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt Defined make macro "AR_FLAGS" to "cr" Defined make macro "AR_LIB_SUFFIX" to "a" Popping language C ================================================================================ TEST checkSharedLinker from config.setCompilers(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/setCompilers.py:1212) TESTING: checkSharedLinker from config.setCompilers(config/BuildSystem/config/setCompilers.py:1212) Check that the linker can produce shared libraries sh: uname -s Executing: uname -s sh: Linux Checking shared linker tau_cc.sh using flags ['-shared'] Checking for program /home/hills/seska/packages/pdt/x86_64/bin/tau_cc.sh...not found Checking for program /home/hills/seska/packages/tau/x86_64/bin/tau_cc.sh...found Defined make macro "LD_SHARED" to "tau_cc.sh" sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -fPIC /tmp/petsc-U9YCMv/config.setCompilers/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -fPIC /tmp/petsc-U9YCMv/config.setCompilers/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.setCompilers/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.setCompilers/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.setCompilers/conftest -shared -fPIC /tmp/petsc-U9YCMv/config.setCompilers/conftest.o Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.setCompilers/conftest -shared -fPIC /tmp/petsc-U9YCMv/config.setCompilers/conftest.o sh: Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.setCompilers/conftest -shared -fPIC /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt Valid C linker flag -shared sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -fPIC /tmp/petsc-U9YCMv/config.setCompilers/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -fPIC /tmp/petsc-U9YCMv/config.setCompilers/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.setCompilers/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.setCompilers/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int foo(void) {printf("hello"); return 0;} Pushing language C Popping language C Pushing language CUDA Popping language CUDA Pushing language Cxx Popping language Cxx Pushing language FC Popping language FC Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.setCompilers/libconftest.so -shared -fPIC /tmp/petsc-U9YCMv/config.setCompilers/conftest.o Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.setCompilers/libconftest.so -shared -fPIC /tmp/petsc-U9YCMv/config.setCompilers/conftest.o sh: Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.setCompilers/libconftest.so -shared -fPIC /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -fPIC /tmp/petsc-U9YCMv/config.setCompilers/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -fPIC /tmp/petsc-U9YCMv/config.setCompilers/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.setCompilers/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.setCompilers/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" int foo(void); int main() { int ret = foo(); if(ret);; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.setCompilers/conftest -fPIC /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -L/tmp/petsc-U9YCMv/config.setCompilers -lconftest Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.setCompilers/conftest -fPIC /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -L/tmp/petsc-U9YCMv/config.setCompilers -lconftest sh: Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.setCompilers/conftest -fPIC /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -L/tmp/petsc-U9YCMv/config.setCompilers -lconftest -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt Using shared linker tau_cc.sh with flags ['-shared'] and library extension so sh: uname -s Executing: uname -s sh: Linux ================================================================================ TEST checkSharedLinkerPaths from config.setCompilers(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/setCompilers.py:1290) TESTING: checkSharedLinkerPaths from config.setCompilers(config/BuildSystem/config/setCompilers.py:1290) Determine the shared linker path options - IRIX: -rpath - Linux, OSF: -Wl,-rpath, - Solaris: -R - FreeBSD: -Wl,-R, Pushing language C sh: uname -s Executing: uname -s sh: Linux sh: tau_cc.sh -V Executing: tau_cc.sh -V sh: Trying C linker flag -Wl,-rpath, sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -fPIC /tmp/petsc-U9YCMv/config.setCompilers/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -fPIC /tmp/petsc-U9YCMv/config.setCompilers/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.setCompilers/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.setCompilers/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.setCompilers/conftest -Wl,-rpath,/home/hills/seska-hills/packages/petsc-3.4.2 -fPIC /tmp/petsc-U9YCMv/config.setCompilers/conftest.o Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.setCompilers/conftest -Wl,-rpath,/home/hills/seska-hills/packages/petsc-3.4.2 -fPIC /tmp/petsc-U9YCMv/config.setCompilers/conftest.o sh: Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.setCompilers/conftest -Wl,-rpath,/home/hills/seska-hills/packages/petsc-3.4.2 -fPIC /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt Valid C linker flag -Wl,-rpath,/home/hills/seska-hills/packages/petsc-3.4.2 Popping language C Pushing language Cxx sh: uname -s Executing: uname -s sh: Linux sh: tau_cc.sh -V Executing: tau_cc.sh -V sh: Trying Cxx linker flag -Wl,-rpath, sh: mpicxx -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -fPIC /tmp/petsc-U9YCMv/config.setCompilers/conftest.cc Executing: mpicxx -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -fPIC /tmp/petsc-U9YCMv/config.setCompilers/conftest.cc sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language CXX Popping language CXX sh: mpicxx -o /tmp/petsc-U9YCMv/config.setCompilers/conftest -Wl,-rpath,/home/hills/seska-hills/packages/petsc-3.4.2 /tmp/petsc-U9YCMv/config.setCompilers/conftest.o Executing: mpicxx -o /tmp/petsc-U9YCMv/config.setCompilers/conftest -Wl,-rpath,/home/hills/seska-hills/packages/petsc-3.4.2 /tmp/petsc-U9YCMv/config.setCompilers/conftest.o sh: Valid Cxx linker flag -Wl,-rpath,/home/hills/seska-hills/packages/petsc-3.4.2 Popping language Cxx Pushing language FC sh: uname -s Executing: uname -s sh: Linux sh: tau_cc.sh -V Executing: tau_cc.sh -V sh: Trying FC linker flag -Wl,-rpath, sh: mpif90 -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -fPIC /tmp/petsc-U9YCMv/config.setCompilers/conftest.F Executing: mpif90 -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -fPIC /tmp/petsc-U9YCMv/config.setCompilers/conftest.F sh: Successful compile: Source: program main end Pushing language FC Popping language FC sh: mpif90 -o /tmp/petsc-U9YCMv/config.setCompilers/conftest -Wl,-rpath,/home/hills/seska-hills/packages/petsc-3.4.2 -fPIC /tmp/petsc-U9YCMv/config.setCompilers/conftest.o Executing: mpif90 -o /tmp/petsc-U9YCMv/config.setCompilers/conftest -Wl,-rpath,/home/hills/seska-hills/packages/petsc-3.4.2 -fPIC /tmp/petsc-U9YCMv/config.setCompilers/conftest.o sh: Valid FC linker flag -Wl,-rpath,/home/hills/seska-hills/packages/petsc-3.4.2 Popping language FC ================================================================================ TEST checkLibC from config.setCompilers(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/setCompilers.py:1325) TESTING: checkLibC from config.setCompilers(config/BuildSystem/config/setCompilers.py:1325) Test whether we need to explicitly include libc in shared linking - Mac OSX requires an explicit reference to libc for shared linking sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -fPIC /tmp/petsc-U9YCMv/config.setCompilers/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -fPIC /tmp/petsc-U9YCMv/config.setCompilers/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.setCompilers/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.setCompilers/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int foo(void) {void *chunk = malloc(31); free(chunk); return 0;} Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.setCompilers/libconftest.so -shared -fPIC /tmp/petsc-U9YCMv/config.setCompilers/conftest.o Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.setCompilers/libconftest.so -shared -fPIC /tmp/petsc-U9YCMv/config.setCompilers/conftest.o sh: Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.setCompilers/libconftest.so -shared -fPIC /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt Shared linking does not require an explicit libc reference ================================================================================ TEST checkDynamicLinker from config.setCompilers(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/setCompilers.py:1374) TESTING: checkDynamicLinker from config.setCompilers(config/BuildSystem/config/setCompilers.py:1374) Check that the linker can dynamicaly load shared libraries Checking for header: dlfcn.h All intermediate test results are stored in /tmp/petsc-U9YCMv/config.headers sh: tau_cc.sh -E -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.headers /tmp/petsc-U9YCMv/config.headers/conftest.c Executing: tau_cc.sh -E -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.headers /tmp/petsc-U9YCMv/config.headers/conftest.c sh: # 1 "/tmp/petsc-U9YCMv/config.headers/conftest.c" # 1 "" # 1 "/tmp/petsc-U9YCMv/config.headers/conftest.c" # 1 "/tmp/petsc-U9YCMv/config.headers/confdefs.h" 1 # 2 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 # 1 "/tmp/petsc-U9YCMv/config.headers/conffix.h" 1 # 3 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 # 1 "/usr/include/dlfcn.h" 1 3 4 # 23 "/usr/include/dlfcn.h" 3 4 # 1 "/usr/include/features.h" 1 3 4 # 341 "/usr/include/features.h" 3 4 # 1 "/usr/include/stdc-predef.h" 1 3 4 # 30 "/usr/include/stdc-predef.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/predefs.h" 1 3 4 # 31 "/usr/include/stdc-predef.h" 2 3 4 # 342 "/usr/include/features.h" 2 3 4 # 371 "/usr/include/features.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/sys/cdefs.h" 1 3 4 # 385 "/usr/include/x86_64-linux-gnu/sys/cdefs.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/wordsize.h" 1 3 4 # 386 "/usr/include/x86_64-linux-gnu/sys/cdefs.h" 2 3 4 # 372 "/usr/include/features.h" 2 3 4 # 395 "/usr/include/features.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/gnu/stubs.h" 1 3 4 # 10 "/usr/include/x86_64-linux-gnu/gnu/stubs.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/gnu/stubs-64.h" 1 3 4 # 11 "/usr/include/x86_64-linux-gnu/gnu/stubs.h" 2 3 4 # 396 "/usr/include/features.h" 2 3 4 # 24 "/usr/include/dlfcn.h" 2 3 4 # 1 "/usr/lib/gcc/x86_64-linux-gnu/4.7/include/stddef.h" 1 3 4 # 213 "/usr/lib/gcc/x86_64-linux-gnu/4.7/include/stddef.h" 3 4 typedef long unsigned int size_t; # 26 "/usr/include/dlfcn.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/dlfcn.h" 1 3 4 # 29 "/usr/include/dlfcn.h" 2 3 4 # 53 "/usr/include/dlfcn.h" 3 4 extern void *dlopen (const char *__file, int __mode) __attribute__ ((__nothrow__ , __leaf__)); extern int dlclose (void *__handle) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern void *dlsym (void *__restrict __handle, const char *__restrict __name) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (2))); # 83 "/usr/include/dlfcn.h" 3 4 extern char *dlerror (void) __attribute__ ((__nothrow__ , __leaf__)); # 189 "/usr/include/dlfcn.h" 3 4 # 3 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 Defined "HAVE_DLFCN_H" to "1" Checking for function dlopen in library ['dl'] [] Pushing language C All intermediate test results are stored in /tmp/petsc-U9YCMv/config.libraries sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.libraries -fPIC /tmp/petsc-U9YCMv/config.libraries/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.libraries -fPIC /tmp/petsc-U9YCMv/config.libraries/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.libraries/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -o /tmp/petsc-U9YCMv/config.libraries/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dlopen(); int main() { dlopen() ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl sh: Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt Defined "HAVE_LIBDL" to "1" Popping language C Checking for function dlsym in library ['dl'] [] Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.libraries -fPIC /tmp/petsc-U9YCMv/config.libraries/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.libraries -fPIC /tmp/petsc-U9YCMv/config.libraries/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.libraries/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -o /tmp/petsc-U9YCMv/config.libraries/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dlsym(); int main() { dlsym() ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl sh: Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt Defined "HAVE_LIBDL" to "1" Popping language C Checking for function dlclose in library ['dl'] [] Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.libraries -fPIC /tmp/petsc-U9YCMv/config.libraries/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.libraries -fPIC /tmp/petsc-U9YCMv/config.libraries/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.libraries/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -o /tmp/petsc-U9YCMv/config.libraries/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dlclose(); int main() { dlclose() ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl sh: Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt Defined "HAVE_LIBDL" to "1" Popping language C Adding ['dl'] to LIBS sh: uname -s Executing: uname -s sh: Linux Checking dynamic linker tau_cc.sh using flags ['-shared'] Checking for program /home/hills/seska/packages/pdt/x86_64/bin/tau_cc.sh...not found Checking for program /home/hills/seska/packages/tau/x86_64/bin/tau_cc.sh...found Defined make macro "DYNAMICLINKER" to "tau_cc.sh" sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.libraries -fPIC /tmp/petsc-U9YCMv/config.setCompilers/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.libraries -fPIC /tmp/petsc-U9YCMv/config.setCompilers/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.setCompilers/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.setCompilers/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.setCompilers/conftest -shared -fPIC /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.setCompilers/conftest -shared -fPIC /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -ldl sh: Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.setCompilers/conftest -shared -fPIC /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt Valid C linker flag -shared sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.libraries -fPIC /tmp/petsc-U9YCMv/config.setCompilers/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.libraries -fPIC /tmp/petsc-U9YCMv/config.setCompilers/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.setCompilers/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.setCompilers/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int foo(void) {printf("test");return 0;} Pushing language C Popping language C Pushing language CUDA Popping language CUDA Pushing language Cxx Popping language Cxx Pushing language FC Popping language FC Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.setCompilers/libconftest.so -shared -fPIC /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.setCompilers/libconftest.so -shared -fPIC /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -ldl sh: Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.setCompilers/libconftest.so -shared -fPIC /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.libraries -fPIC /tmp/petsc-U9YCMv/config.setCompilers/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.libraries -fPIC /tmp/petsc-U9YCMv/config.setCompilers/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.setCompilers/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.setCompilers/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Possible ERROR while running compiler: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.setCompilers/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.setCompilers/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb error message = {/tmp/petsc-U9YCMv/config.setCompilers/conftest.c: In function ‘main’: /tmp/petsc-U9YCMv/config.setCompilers/conftest.c:11:3: warning: incompatible implicit declaration of built-in function ‘printf’ [enabled by default] /tmp/petsc-U9YCMv/config.setCompilers/conftest.c:15:3: warning: incompatible implicit declaration of built-in function ‘printf’ [enabled by default] /tmp/petsc-U9YCMv/config.setCompilers/conftest.c:19:3: warning: incompatible implicit declaration of built-in function ‘printf’ [enabled by default] } Source: #include "confdefs.h" #include "conffix.h" #include int main() { void *handle = dlopen("/tmp/petsc-U9YCMv/config.setCompilers/libconftest.so", 0); int (*foo)(void) = (int (*)(void)) dlsym(handle, "foo"); if (!foo) { printf("Could not load symbol\n"); return -1; } if ((*foo)()) { printf("Invalid return from foo()\n"); return -1; } if (dlclose(handle)) { printf("Could not close library\n"); return -1; } ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.setCompilers/conftest -fPIC /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.setCompilers/conftest -fPIC /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -ldl sh: Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.setCompilers/conftest -fPIC /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt Using dynamic linker tau_cc.sh with flags ['-shared'] and library extension so ================================================================================ TEST output from config.setCompilers(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/setCompilers.py:1420) TESTING: output from config.setCompilers(config/BuildSystem/config/setCompilers.py:1420) Output module data as defines and substitutions Substituting "CC" with "tau_cc.sh" Substituting "CFLAGS" with " -fPIC" Defined make macro "CC_LINKER_SLFLAG" to "-Wl,-rpath," Substituting "CPP" with "tau_cc.sh -E" Substituting "CPPFLAGS" with "" Substituting "CXX" with "mpicxx" Substituting "CXX_CXXFLAGS" with " -fPIC" Substituting "CXXFLAGS" with "" Substituting "CXX_LINKER_SLFLAG" with "-Wl,-rpath," Substituting "CXXCPP" with "mpicxx -E" Substituting "CXXCPPFLAGS" with "" Substituting "FC" with "mpif90" Substituting "FFLAGS" with " -fPIC" Defined make macro "FC_LINKER_SLFLAG" to "-Wl,-rpath," Substituting "LDFLAGS" with "" Substituting "LIBS" with "-ldl " Substituting "SHARED_LIBRARY_FLAG" with "-shared" ================================================================================ TEST configureCompilerFlags from config.compilerFlags(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/compilerFlags.py:65) TESTING: configureCompilerFlags from config.compilerFlags(config/BuildSystem/config/compilerFlags.py:65) Get the default compiler flags Pushing language C sh: tau_cc.sh --version Executing: tau_cc.sh --version sh: gcc (Ubuntu/Linaro 4.7.3-1ubuntu1) 4.7.3 Copyright (C) 2012 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. getCompilerVersion: tau_cc.sh gcc (Ubuntu/Linaro 4.7.3-1ubuntu1) 4.7.3 sh: tau_cc.sh --help Executing: tau_cc.sh --help sh: Usage: tau_compiler.sh -optVerbose Turn on verbose debugging message -optMemDbg Enable TAU's runtime memory debugger -optDetectMemoryLeaks Synonym for -optMemDbg -optPdtDir="" PDT architecture directory. Typically $(PDTDIR)/$(PDTARCHDIR) -optPdtF95Opts="" Options for Fortran parser in PDT (f95parse) -optPdtF95Reset="" Reset options to the Fortran parser to the given list -optPdtCOpts="" Options for C parser in PDT (cparse). Typically $(TAU_MPI_INCLUDE) $(TAU_INCLUDE) $(TAU_DEFS) -optPdtCReset="" Reset options to the C parser to the given list -optPdtCxxOpts="" Options for C++ parser in PDT (cxxparse). Typically $(TAU_MPI_INCLUDE) $(TAU_INCLUDE) $(TAU_DEFS) -optPdtCxxReset="" Reset options to the C++ parser to the given list -optPdtF90Parser="" Specify a different Fortran parser. For e.g., f90parse instead of f95parse -optPdtGnuFortranParser Specify the GNU gfortran PDT parser gfparse instead of f95parse -optPdtCleanscapeParser Specify the Cleanscape Fortran parser -optPdtUser="" Optional arguments for parsing source code -optTauInstr="" Specify location of tau_instrumentor. Typically $(TAUROOT)/$(CONFIG_ARCH)/bin/tau_instrumentor -optPreProcess Preprocess the source code before parsing. Uses /usr/bin/cpp -P by default. -optContinueBeforeOMP Insert a CONTINUE statement before !$OMP directives. -optCPP="" Specify an alternative preprocessor and pre-process the sources. -optCPPOpts="" Specify additional options to the C pre-processor. -optCPPReset="" Reset C preprocessor options to the specified list. -optTauSelectFile="" Specify selective instrumentation file for tau_instrumentor. -optTauWrapFile="" Specify path to the link_options.tau file generated by tau_wrap -optTrackIO Specify wrapping of POSIX I/O calls at link time. -optTrackUPCR Specify wrapping of UPC runtime calls at link time. -optTrackDMAPP Specify wrapping of Cray DMAPP library calls at link time. -optTrackPthread Specify wrapping of Pthread library calls at link time. -optTrackGOMP Specify wrapping of GOMP library calls at link time. (default) -optNoTrackGOMP Disable wrapping of GOMP library calls at link time. -optTrackMPCThread Specify wrapping of MPC Thread library calls at link time. -optWrappersDir="" Specify the location of the link wrappers directory. -optPDBFile="" Specify PDB file for tau_instrumentor. Skips parsing stage. -optTau="" Specify options for tau_instrumentor -optCompile="" Options passed to the compiler by the user. -optTauDefs="" Options passed to the compiler by TAU. Typically $(TAU_DEFS) -optTauIncludes="" Options passed to the compiler by TAU. Typically $(TAU_MPI_INCLUDE) $(TAU_INCLUDE) -optIncludeMemory="" Flags for replacement of malloc/free. Typically -I$(TAU_DIR)/include/TauMemory -optReset="" Reset options to the compiler to the given list -optLinking="" Options passed to the linker. Typically $(TAU_MPI_FLIBS) $(TAU_LIBS) $(TAU_CXXLIBS) -optLinkReset="" Reset options to the linker to the given list -optLinkPreserveLib="" Libraries which TAU should preserve the order of on the link line see "Moving these libraries to the end of the link line:". Default: none. -optTauCC="" Specifies the C compiler used by TAU -optTauUseCXXForC Specifies the use of a C++ compiler for compiling C code -optUseReturnFix Specifies the use of a bug fix with ROSE parser using EDG v3.x -optOpariTool="" Specifies the location of the Opari tool -optLinkOnly Disable instrumentation during compilation, do link in the TAU libs -optOpariDir="" Specifies the location of the Opari directory -optOpariOpts="" Specifies optional arguments to the Opari tool -optOpariNoInit="" Do not initlize the POMP2 regions. -optOpariLibs="" Specifies the libraries that have POMP2 regions. (Overrides optOpariNoInit -optOpariReset="" Resets options passed to the Opari tool -optOpari2Tool="" Specifies the location of the Opari tool -optOpari2ConfigTool="" Specifies the location of the Opari tool -optOpari2Opts="" Specifies optional arguments to the Opari tool -optOpari2Reset="" Resets options passed to the Opari tool -optOpari2Dir="" Specifies the location of the Opari directory -optNoMpi Removes -l*mpi* libraries during linking -optMpi Does not remove -l*mpi* libraries during linking (default) -optNoRevert Exit on error. Does not revert to the original compilation rule on error. -optRevert Revert to the original compilation rule on error (default). -optNoCompInst Do not revert to compiler instrumentation if source instrumentation fails. -optKeepFiles Does not remove intermediate .pdb and .inst.* files -optAppCC="" Specifies the fallback C compiler. -optAppCXX="" Specifies the fallback C++ compiler. -optAppF90="" Specifies the fallback F90 compiler. -optShared Use shared library version of TAU. -optCompInst Use compiler-based instrumentation. -optPDTInst Use PDT-based instrumentation. -optHeaderInst Enable instrumentation of headers -optDisableHeaderInst Disable instrumentation of headers -optFixHashIf -optMICOffload Links code for Intel MIC offloading, requires both host and MIC TAU libraries sh: tau_cc.sh --help Executing: tau_cc.sh --help sh: Usage: tau_compiler.sh -optVerbose Turn on verbose debugging message -optMemDbg Enable TAU's runtime memory debugger -optDetectMemoryLeaks Synonym for -optMemDbg -optPdtDir="" PDT architecture directory. Typically $(PDTDIR)/$(PDTARCHDIR) -optPdtF95Opts="" Options for Fortran parser in PDT (f95parse) -optPdtF95Reset="" Reset options to the Fortran parser to the given list -optPdtCOpts="" Options for C parser in PDT (cparse). Typically $(TAU_MPI_INCLUDE) $(TAU_INCLUDE) $(TAU_DEFS) -optPdtCReset="" Reset options to the C parser to the given list -optPdtCxxOpts="" Options for C++ parser in PDT (cxxparse). Typically $(TAU_MPI_INCLUDE) $(TAU_INCLUDE) $(TAU_DEFS) -optPdtCxxReset="" Reset options to the C++ parser to the given list -optPdtF90Parser="" Specify a different Fortran parser. For e.g., f90parse instead of f95parse -optPdtGnuFortranParser Specify the GNU gfortran PDT parser gfparse instead of f95parse -optPdtCleanscapeParser Specify the Cleanscape Fortran parser -optPdtUser="" Optional arguments for parsing source code -optTauInstr="" Specify location of tau_instrumentor. Typically $(TAUROOT)/$(CONFIG_ARCH)/bin/tau_instrumentor -optPreProcess Preprocess the source code before parsing. Uses /usr/bin/cpp -P by default. -optContinueBeforeOMP Insert a CONTINUE statement before !$OMP directives. -optCPP="" Specify an alternative preprocessor and pre-process the sources. -optCPPOpts="" Specify additional options to the C pre-processor. -optCPPReset="" Reset C preprocessor options to the specified list. -optTauSelectFile="" Specify selective instrumentation file for tau_instrumentor. -optTauWrapFile="" Specify path to the link_options.tau file generated by tau_wrap -optTrackIO Specify wrapping of POSIX I/O calls at link time. -optTrackUPCR Specify wrapping of UPC runtime calls at link time. -optTrackDMAPP Specify wrapping of Cray DMAPP library calls at link time. -optTrackPthread Specify wrapping of Pthread library calls at link time. -optTrackGOMP Specify wrapping of GOMP library calls at link time. (default) -optNoTrackGOMP Disable wrapping of GOMP library calls at link time. -optTrackMPCThread Specify wrapping of MPC Thread library calls at link time. -optWrappersDir="" Specify the location of the link wrappers directory. -optPDBFile="" Specify PDB file for tau_instrumentor. Skips parsing stage. -optTau="" Specify options for tau_instrumentor -optCompile="" Options passed to the compiler by the user. -optTauDefs="" Options passed to the compiler by TAU. Typically $(TAU_DEFS) -optTauIncludes="" Options passed to the compiler by TAU. Typically $(TAU_MPI_INCLUDE) $(TAU_INCLUDE) -optIncludeMemory="" Flags for replacement of malloc/free. Typically -I$(TAU_DIR)/include/TauMemory -optReset="" Reset options to the compiler to the given list -optLinking="" Options passed to the linker. Typically $(TAU_MPI_FLIBS) $(TAU_LIBS) $(TAU_CXXLIBS) -optLinkReset="" Reset options to the linker to the given list -optLinkPreserveLib="" Libraries which TAU should preserve the order of on the link line see "Moving these libraries to the end of the link line:". Default: none. -optTauCC="" Specifies the C compiler used by TAU -optTauUseCXXForC Specifies the use of a C++ compiler for compiling C code -optUseReturnFix Specifies the use of a bug fix with ROSE parser using EDG v3.x -optOpariTool="" Specifies the location of the Opari tool -optLinkOnly Disable instrumentation during compilation, do link in the TAU libs -optOpariDir="" Specifies the location of the Opari directory -optOpariOpts="" Specifies optional arguments to the Opari tool -optOpariNoInit="" Do not initlize the POMP2 regions. -optOpariLibs="" Specifies the libraries that have POMP2 regions. (Overrides optOpariNoInit -optOpariReset="" Resets options passed to the Opari tool -optOpari2Tool="" Specifies the location of the Opari tool -optOpari2ConfigTool="" Specifies the location of the Opari tool -optOpari2Opts="" Specifies optional arguments to the Opari tool -optOpari2Reset="" Resets options passed to the Opari tool -optOpari2Dir="" Specifies the location of the Opari directory -optNoMpi Removes -l*mpi* libraries during linking -optMpi Does not remove -l*mpi* libraries during linking (default) -optNoRevert Exit on error. Does not revert to the original compilation rule on error. -optRevert Revert to the original compilation rule on error (default). -optNoCompInst Do not revert to compiler instrumentation if source instrumentation fails. -optKeepFiles Does not remove intermediate .pdb and .inst.* files -optAppCC="" Specifies the fallback C compiler. -optAppCXX="" Specifies the fallback C++ compiler. -optAppF90="" Specifies the fallback F90 compiler. -optShared Use shared library version of TAU. -optCompInst Use compiler-based instrumentation. -optPDTInst Use PDT-based instrumentation. -optHeaderInst Enable instrumentation of headers -optDisableHeaderInst Disable instrumentation of headers -optFixHashIf -optMICOffload Links code for Intel MIC offloading, requires both host and MIC TAU libraries sh: tau_cc.sh --help Executing: tau_cc.sh --help sh: Usage: tau_compiler.sh -optVerbose Turn on verbose debugging message -optMemDbg Enable TAU's runtime memory debugger -optDetectMemoryLeaks Synonym for -optMemDbg -optPdtDir="" PDT architecture directory. Typically $(PDTDIR)/$(PDTARCHDIR) -optPdtF95Opts="" Options for Fortran parser in PDT (f95parse) -optPdtF95Reset="" Reset options to the Fortran parser to the given list -optPdtCOpts="" Options for C parser in PDT (cparse). Typically $(TAU_MPI_INCLUDE) $(TAU_INCLUDE) $(TAU_DEFS) -optPdtCReset="" Reset options to the C parser to the given list -optPdtCxxOpts="" Options for C++ parser in PDT (cxxparse). Typically $(TAU_MPI_INCLUDE) $(TAU_INCLUDE) $(TAU_DEFS) -optPdtCxxReset="" Reset options to the C++ parser to the given list -optPdtF90Parser="" Specify a different Fortran parser. For e.g., f90parse instead of f95parse -optPdtGnuFortranParser Specify the GNU gfortran PDT parser gfparse instead of f95parse -optPdtCleanscapeParser Specify the Cleanscape Fortran parser -optPdtUser="" Optional arguments for parsing source code -optTauInstr="" Specify location of tau_instrumentor. Typically $(TAUROOT)/$(CONFIG_ARCH)/bin/tau_instrumentor -optPreProcess Preprocess the source code before parsing. Uses /usr/bin/cpp -P by default. -optContinueBeforeOMP Insert a CONTINUE statement before !$OMP directives. -optCPP="" Specify an alternative preprocessor and pre-process the sources. -optCPPOpts="" Specify additional options to the C pre-processor. -optCPPReset="" Reset C preprocessor options to the specified list. -optTauSelectFile="" Specify selective instrumentation file for tau_instrumentor. -optTauWrapFile="" Specify path to the link_options.tau file generated by tau_wrap -optTrackIO Specify wrapping of POSIX I/O calls at link time. -optTrackUPCR Specify wrapping of UPC runtime calls at link time. -optTrackDMAPP Specify wrapping of Cray DMAPP library calls at link time. -optTrackPthread Specify wrapping of Pthread library calls at link time. -optTrackGOMP Specify wrapping of GOMP library calls at link time. (default) -optNoTrackGOMP Disable wrapping of GOMP library calls at link time. -optTrackMPCThread Specify wrapping of MPC Thread library calls at link time. -optWrappersDir="" Specify the location of the link wrappers directory. -optPDBFile="" Specify PDB file for tau_instrumentor. Skips parsing stage. -optTau="" Specify options for tau_instrumentor -optCompile="" Options passed to the compiler by the user. -optTauDefs="" Options passed to the compiler by TAU. Typically $(TAU_DEFS) -optTauIncludes="" Options passed to the compiler by TAU. Typically $(TAU_MPI_INCLUDE) $(TAU_INCLUDE) -optIncludeMemory="" Flags for replacement of malloc/free. Typically -I$(TAU_DIR)/include/TauMemory -optReset="" Reset options to the compiler to the given list -optLinking="" Options passed to the linker. Typically $(TAU_MPI_FLIBS) $(TAU_LIBS) $(TAU_CXXLIBS) -optLinkReset="" Reset options to the linker to the given list -optLinkPreserveLib="" Libraries which TAU should preserve the order of on the link line see "Moving these libraries to the end of the link line:". Default: none. -optTauCC="" Specifies the C compiler used by TAU -optTauUseCXXForC Specifies the use of a C++ compiler for compiling C code -optUseReturnFix Specifies the use of a bug fix with ROSE parser using EDG v3.x -optOpariTool="" Specifies the location of the Opari tool -optLinkOnly Disable instrumentation during compilation, do link in the TAU libs -optOpariDir="" Specifies the location of the Opari directory -optOpariOpts="" Specifies optional arguments to the Opari tool -optOpariNoInit="" Do not initlize the POMP2 regions. -optOpariLibs="" Specifies the libraries that have POMP2 regions. (Overrides optOpariNoInit -optOpariReset="" Resets options passed to the Opari tool -optOpari2Tool="" Specifies the location of the Opari tool -optOpari2ConfigTool="" Specifies the location of the Opari tool -optOpari2Opts="" Specifies optional arguments to the Opari tool -optOpari2Reset="" Resets options passed to the Opari tool -optOpari2Dir="" Specifies the location of the Opari directory -optNoMpi Removes -l*mpi* libraries during linking -optMpi Does not remove -l*mpi* libraries during linking (default) -optNoRevert Exit on error. Does not revert to the original compilation rule on error. -optRevert Revert to the original compilation rule on error (default). -optNoCompInst Do not revert to compiler instrumentation if source instrumentation fails. -optKeepFiles Does not remove intermediate .pdb and .inst.* files -optAppCC="" Specifies the fallback C compiler. -optAppCXX="" Specifies the fallback C++ compiler. -optAppF90="" Specifies the fallback F90 compiler. -optShared Use shared library version of TAU. -optCompInst Use compiler-based instrumentation. -optPDTInst Use PDT-based instrumentation. -optHeaderInst Enable instrumentation of headers -optDisableHeaderInst Disable instrumentation of headers -optFixHashIf -optMICOffload Links code for Intel MIC offloading, requires both host and MIC TAU libraries sh: tau_cc.sh --help Executing: tau_cc.sh --help sh: Usage: tau_compiler.sh -optVerbose Turn on verbose debugging message -optMemDbg Enable TAU's runtime memory debugger -optDetectMemoryLeaks Synonym for -optMemDbg -optPdtDir="" PDT architecture directory. Typically $(PDTDIR)/$(PDTARCHDIR) -optPdtF95Opts="" Options for Fortran parser in PDT (f95parse) -optPdtF95Reset="" Reset options to the Fortran parser to the given list -optPdtCOpts="" Options for C parser in PDT (cparse). Typically $(TAU_MPI_INCLUDE) $(TAU_INCLUDE) $(TAU_DEFS) -optPdtCReset="" Reset options to the C parser to the given list -optPdtCxxOpts="" Options for C++ parser in PDT (cxxparse). Typically $(TAU_MPI_INCLUDE) $(TAU_INCLUDE) $(TAU_DEFS) -optPdtCxxReset="" Reset options to the C++ parser to the given list -optPdtF90Parser="" Specify a different Fortran parser. For e.g., f90parse instead of f95parse -optPdtGnuFortranParser Specify the GNU gfortran PDT parser gfparse instead of f95parse -optPdtCleanscapeParser Specify the Cleanscape Fortran parser -optPdtUser="" Optional arguments for parsing source code -optTauInstr="" Specify location of tau_instrumentor. Typically $(TAUROOT)/$(CONFIG_ARCH)/bin/tau_instrumentor -optPreProcess Preprocess the source code before parsing. Uses /usr/bin/cpp -P by default. -optContinueBeforeOMP Insert a CONTINUE statement before !$OMP directives. -optCPP="" Specify an alternative preprocessor and pre-process the sources. -optCPPOpts="" Specify additional options to the C pre-processor. -optCPPReset="" Reset C preprocessor options to the specified list. -optTauSelectFile="" Specify selective instrumentation file for tau_instrumentor. -optTauWrapFile="" Specify path to the link_options.tau file generated by tau_wrap -optTrackIO Specify wrapping of POSIX I/O calls at link time. -optTrackUPCR Specify wrapping of UPC runtime calls at link time. -optTrackDMAPP Specify wrapping of Cray DMAPP library calls at link time. -optTrackPthread Specify wrapping of Pthread library calls at link time. -optTrackGOMP Specify wrapping of GOMP library calls at link time. (default) -optNoTrackGOMP Disable wrapping of GOMP library calls at link time. -optTrackMPCThread Specify wrapping of MPC Thread library calls at link time. -optWrappersDir="" Specify the location of the link wrappers directory. -optPDBFile="" Specify PDB file for tau_instrumentor. Skips parsing stage. -optTau="" Specify options for tau_instrumentor -optCompile="" Options passed to the compiler by the user. -optTauDefs="" Options passed to the compiler by TAU. Typically $(TAU_DEFS) -optTauIncludes="" Options passed to the compiler by TAU. Typically $(TAU_MPI_INCLUDE) $(TAU_INCLUDE) -optIncludeMemory="" Flags for replacement of malloc/free. Typically -I$(TAU_DIR)/include/TauMemory -optReset="" Reset options to the compiler to the given list -optLinking="" Options passed to the linker. Typically $(TAU_MPI_FLIBS) $(TAU_LIBS) $(TAU_CXXLIBS) -optLinkReset="" Reset options to the linker to the given list -optLinkPreserveLib="" Libraries which TAU should preserve the order of on the link line see "Moving these libraries to the end of the link line:". Default: none. -optTauCC="" Specifies the C compiler used by TAU -optTauUseCXXForC Specifies the use of a C++ compiler for compiling C code -optUseReturnFix Specifies the use of a bug fix with ROSE parser using EDG v3.x -optOpariTool="" Specifies the location of the Opari tool -optLinkOnly Disable instrumentation during compilation, do link in the TAU libs -optOpariDir="" Specifies the location of the Opari directory -optOpariOpts="" Specifies optional arguments to the Opari tool -optOpariNoInit="" Do not initlize the POMP2 regions. -optOpariLibs="" Specifies the libraries that have POMP2 regions. (Overrides optOpariNoInit -optOpariReset="" Resets options passed to the Opari tool -optOpari2Tool="" Specifies the location of the Opari tool -optOpari2ConfigTool="" Specifies the location of the Opari tool -optOpari2Opts="" Specifies optional arguments to the Opari tool -optOpari2Reset="" Resets options passed to the Opari tool -optOpari2Dir="" Specifies the location of the Opari directory -optNoMpi Removes -l*mpi* libraries during linking -optMpi Does not remove -l*mpi* libraries during linking (default) -optNoRevert Exit on error. Does not revert to the original compilation rule on error. -optRevert Revert to the original compilation rule on error (default). -optNoCompInst Do not revert to compiler instrumentation if source instrumentation fails. -optKeepFiles Does not remove intermediate .pdb and .inst.* files -optAppCC="" Specifies the fallback C compiler. -optAppCXX="" Specifies the fallback C++ compiler. -optAppF90="" Specifies the fallback F90 compiler. -optShared Use shared library version of TAU. -optCompInst Use compiler-based instrumentation. -optPDTInst Use PDT-based instrumentation. -optHeaderInst Enable instrumentation of headers -optDisableHeaderInst Disable instrumentation of headers -optFixHashIf -optMICOffload Links code for Intel MIC offloading, requires both host and MIC TAU libraries sh: tau_cc.sh --help Executing: tau_cc.sh --help sh: Usage: tau_compiler.sh -optVerbose Turn on verbose debugging message -optMemDbg Enable TAU's runtime memory debugger -optDetectMemoryLeaks Synonym for -optMemDbg -optPdtDir="" PDT architecture directory. Typically $(PDTDIR)/$(PDTARCHDIR) -optPdtF95Opts="" Options for Fortran parser in PDT (f95parse) -optPdtF95Reset="" Reset options to the Fortran parser to the given list -optPdtCOpts="" Options for C parser in PDT (cparse). Typically $(TAU_MPI_INCLUDE) $(TAU_INCLUDE) $(TAU_DEFS) -optPdtCReset="" Reset options to the C parser to the given list -optPdtCxxOpts="" Options for C++ parser in PDT (cxxparse). Typically $(TAU_MPI_INCLUDE) $(TAU_INCLUDE) $(TAU_DEFS) -optPdtCxxReset="" Reset options to the C++ parser to the given list -optPdtF90Parser="" Specify a different Fortran parser. For e.g., f90parse instead of f95parse -optPdtGnuFortranParser Specify the GNU gfortran PDT parser gfparse instead of f95parse -optPdtCleanscapeParser Specify the Cleanscape Fortran parser -optPdtUser="" Optional arguments for parsing source code -optTauInstr="" Specify location of tau_instrumentor. Typically $(TAUROOT)/$(CONFIG_ARCH)/bin/tau_instrumentor -optPreProcess Preprocess the source code before parsing. Uses /usr/bin/cpp -P by default. -optContinueBeforeOMP Insert a CONTINUE statement before !$OMP directives. -optCPP="" Specify an alternative preprocessor and pre-process the sources. -optCPPOpts="" Specify additional options to the C pre-processor. -optCPPReset="" Reset C preprocessor options to the specified list. -optTauSelectFile="" Specify selective instrumentation file for tau_instrumentor. -optTauWrapFile="" Specify path to the link_options.tau file generated by tau_wrap -optTrackIO Specify wrapping of POSIX I/O calls at link time. -optTrackUPCR Specify wrapping of UPC runtime calls at link time. -optTrackDMAPP Specify wrapping of Cray DMAPP library calls at link time. -optTrackPthread Specify wrapping of Pthread library calls at link time. -optTrackGOMP Specify wrapping of GOMP library calls at link time. (default) -optNoTrackGOMP Disable wrapping of GOMP library calls at link time. -optTrackMPCThread Specify wrapping of MPC Thread library calls at link time. -optWrappersDir="" Specify the location of the link wrappers directory. -optPDBFile="" Specify PDB file for tau_instrumentor. Skips parsing stage. -optTau="" Specify options for tau_instrumentor -optCompile="" Options passed to the compiler by the user. -optTauDefs="" Options passed to the compiler by TAU. Typically $(TAU_DEFS) -optTauIncludes="" Options passed to the compiler by TAU. Typically $(TAU_MPI_INCLUDE) $(TAU_INCLUDE) -optIncludeMemory="" Flags for replacement of malloc/free. Typically -I$(TAU_DIR)/include/TauMemory -optReset="" Reset options to the compiler to the given list -optLinking="" Options passed to the linker. Typically $(TAU_MPI_FLIBS) $(TAU_LIBS) $(TAU_CXXLIBS) -optLinkReset="" Reset options to the linker to the given list -optLinkPreserveLib="" Libraries which TAU should preserve the order of on the link line see "Moving these libraries to the end of the link line:". Default: none. -optTauCC="" Specifies the C compiler used by TAU -optTauUseCXXForC Specifies the use of a C++ compiler for compiling C code -optUseReturnFix Specifies the use of a bug fix with ROSE parser using EDG v3.x -optOpariTool="" Specifies the location of the Opari tool -optLinkOnly Disable instrumentation during compilation, do link in the TAU libs -optOpariDir="" Specifies the location of the Opari directory -optOpariOpts="" Specifies optional arguments to the Opari tool -optOpariNoInit="" Do not initlize the POMP2 regions. -optOpariLibs="" Specifies the libraries that have POMP2 regions. (Overrides optOpariNoInit -optOpariReset="" Resets options passed to the Opari tool -optOpari2Tool="" Specifies the location of the Opari tool -optOpari2ConfigTool="" Specifies the location of the Opari tool -optOpari2Opts="" Specifies optional arguments to the Opari tool -optOpari2Reset="" Resets options passed to the Opari tool -optOpari2Dir="" Specifies the location of the Opari directory -optNoMpi Removes -l*mpi* libraries during linking -optMpi Does not remove -l*mpi* libraries during linking (default) -optNoRevert Exit on error. Does not revert to the original compilation rule on error. -optRevert Revert to the original compilation rule on error (default). -optNoCompInst Do not revert to compiler instrumentation if source instrumentation fails. -optKeepFiles Does not remove intermediate .pdb and .inst.* files -optAppCC="" Specifies the fallback C compiler. -optAppCXX="" Specifies the fallback C++ compiler. -optAppF90="" Specifies the fallback F90 compiler. -optShared Use shared library version of TAU. -optCompInst Use compiler-based instrumentation. -optPDTInst Use PDT-based instrumentation. -optHeaderInst Enable instrumentation of headers -optDisableHeaderInst Disable instrumentation of headers -optFixHashIf -optMICOffload Links code for Intel MIC offloading, requires both host and MIC TAU libraries sh: tau_cc.sh --help Executing: tau_cc.sh --help sh: Usage: tau_compiler.sh -optVerbose Turn on verbose debugging message -optMemDbg Enable TAU's runtime memory debugger -optDetectMemoryLeaks Synonym for -optMemDbg -optPdtDir="" PDT architecture directory. Typically $(PDTDIR)/$(PDTARCHDIR) -optPdtF95Opts="" Options for Fortran parser in PDT (f95parse) -optPdtF95Reset="" Reset options to the Fortran parser to the given list -optPdtCOpts="" Options for C parser in PDT (cparse). Typically $(TAU_MPI_INCLUDE) $(TAU_INCLUDE) $(TAU_DEFS) -optPdtCReset="" Reset options to the C parser to the given list -optPdtCxxOpts="" Options for C++ parser in PDT (cxxparse). Typically $(TAU_MPI_INCLUDE) $(TAU_INCLUDE) $(TAU_DEFS) -optPdtCxxReset="" Reset options to the C++ parser to the given list -optPdtF90Parser="" Specify a different Fortran parser. For e.g., f90parse instead of f95parse -optPdtGnuFortranParser Specify the GNU gfortran PDT parser gfparse instead of f95parse -optPdtCleanscapeParser Specify the Cleanscape Fortran parser -optPdtUser="" Optional arguments for parsing source code -optTauInstr="" Specify location of tau_instrumentor. Typically $(TAUROOT)/$(CONFIG_ARCH)/bin/tau_instrumentor -optPreProcess Preprocess the source code before parsing. Uses /usr/bin/cpp -P by default. -optContinueBeforeOMP Insert a CONTINUE statement before !$OMP directives. -optCPP="" Specify an alternative preprocessor and pre-process the sources. -optCPPOpts="" Specify additional options to the C pre-processor. -optCPPReset="" Reset C preprocessor options to the specified list. -optTauSelectFile="" Specify selective instrumentation file for tau_instrumentor. -optTauWrapFile="" Specify path to the link_options.tau file generated by tau_wrap -optTrackIO Specify wrapping of POSIX I/O calls at link time. -optTrackUPCR Specify wrapping of UPC runtime calls at link time. -optTrackDMAPP Specify wrapping of Cray DMAPP library calls at link time. -optTrackPthread Specify wrapping of Pthread library calls at link time. -optTrackGOMP Specify wrapping of GOMP library calls at link time. (default) -optNoTrackGOMP Disable wrapping of GOMP library calls at link time. -optTrackMPCThread Specify wrapping of MPC Thread library calls at link time. -optWrappersDir="" Specify the location of the link wrappers directory. -optPDBFile="" Specify PDB file for tau_instrumentor. Skips parsing stage. -optTau="" Specify options for tau_instrumentor -optCompile="" Options passed to the compiler by the user. -optTauDefs="" Options passed to the compiler by TAU. Typically $(TAU_DEFS) -optTauIncludes="" Options passed to the compiler by TAU. Typically $(TAU_MPI_INCLUDE) $(TAU_INCLUDE) -optIncludeMemory="" Flags for replacement of malloc/free. Typically -I$(TAU_DIR)/include/TauMemory -optReset="" Reset options to the compiler to the given list -optLinking="" Options passed to the linker. Typically $(TAU_MPI_FLIBS) $(TAU_LIBS) $(TAU_CXXLIBS) -optLinkReset="" Reset options to the linker to the given list -optLinkPreserveLib="" Libraries which TAU should preserve the order of on the link line see "Moving these libraries to the end of the link line:". Default: none. -optTauCC="" Specifies the C compiler used by TAU -optTauUseCXXForC Specifies the use of a C++ compiler for compiling C code -optUseReturnFix Specifies the use of a bug fix with ROSE parser using EDG v3.x -optOpariTool="" Specifies the location of the Opari tool -optLinkOnly Disable instrumentation during compilation, do link in the TAU libs -optOpariDir="" Specifies the location of the Opari directory -optOpariOpts="" Specifies optional arguments to the Opari tool -optOpariNoInit="" Do not initlize the POMP2 regions. -optOpariLibs="" Specifies the libraries that have POMP2 regions. (Overrides optOpariNoInit -optOpariReset="" Resets options passed to the Opari tool -optOpari2Tool="" Specifies the location of the Opari tool -optOpari2ConfigTool="" Specifies the location of the Opari tool -optOpari2Opts="" Specifies optional arguments to the Opari tool -optOpari2Reset="" Resets options passed to the Opari tool -optOpari2Dir="" Specifies the location of the Opari directory -optNoMpi Removes -l*mpi* libraries during linking -optMpi Does not remove -l*mpi* libraries during linking (default) -optNoRevert Exit on error. Does not revert to the original compilation rule on error. -optRevert Revert to the original compilation rule on error (default). -optNoCompInst Do not revert to compiler instrumentation if source instrumentation fails. -optKeepFiles Does not remove intermediate .pdb and .inst.* files -optAppCC="" Specifies the fallback C compiler. -optAppCXX="" Specifies the fallback C++ compiler. -optAppF90="" Specifies the fallback F90 compiler. -optShared Use shared library version of TAU. -optCompInst Use compiler-based instrumentation. -optPDTInst Use PDT-based instrumentation. -optHeaderInst Enable instrumentation of headers -optDisableHeaderInst Disable instrumentation of headers -optFixHashIf -optMICOffload Links code for Intel MIC offloading, requires both host and MIC TAU libraries Trying C compiler flag -g sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.setCompilers/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.setCompilers/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.setCompilers/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.setCompilers/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Added C compiler flag -g Popping language C Pushing language Cxx sh: mpicxx --version Executing: mpicxx --version sh: g++ (Ubuntu/Linaro 4.7.3-1ubuntu1) 4.7.3 Copyright (C) 2012 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. getCompilerVersion: mpicxx g++ (Ubuntu/Linaro 4.7.3-1ubuntu1) 4.7.3 sh: mpicxx -show Executing: mpicxx -show sh: g++ -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g -fPIC -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpichcxx -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread Defined make macro "MPICXX_SHOW" to "g++ -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g -fPIC -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpichcxx -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread" sh: g++ --help Executing: g++ --help sh: Usage: g++ [options] file... Options: -pass-exit-codes Exit with highest error code from a phase --help Display this information --target-help Display target specific command line options --help={common|optimizers|params|target|warnings|[^]{joined|separate|undocumented}}[,...] Display specific types of command line options (Use '-v --help' to display command line options of sub-processes) --version Display compiler version information -dumpspecs Display all of the built in spec strings -dumpversion Display the version of the compiler -dumpmachine Display the compiler's target processor -print-search-dirs Display the directories in the compiler's search path -print-libgcc-file-name Display the name of the compiler's companion library -print-file-name= Display the full path to library -print-prog-name= Display the full path to compiler component -print-multiarch Display the target's normalized GNU triplet, used as a component in the library path -print-multi-directory Display the root directory for versions of libgcc -print-multi-lib Display the mapping between command line options and multiple library search directories -print-multi-os-directory Display the relative path to OS libraries -print-sysroot Display the target libraries directory -print-sysroot-headers-suffix Display the sysroot suffix used to find headers -Wa, Pass comma-separated on to the assembler -Wp, Pass comma-separated on to the preprocessor -Wl, Pass comma-separated on to the linker -Xassembler Pass on to the assembler -Xpreprocessor Pass on to the preprocessor -Xlinker Pass on to the linker -save-temps Do not delete intermediate files -save-temps= Do not delete intermediate files -no-canonical-prefixes Do not canonicalize paths when building relative prefixes to other gcc components -pipe Use pipes rather than intermediate files -time Time the execution of each subprocess -specs= Override built-in specs with the contents of -std= Assume that the input sources are for --sysroot= Use as the root directory for headers and libraries -B Add to the compiler's search paths -v Display the programs invoked by the compiler -### Like -v but options quoted and commands not executed -E Preprocess only; do not compile, assemble or link -S Compile only; do not assemble or link -c Compile and assemble, but do not link -o Place the output into -pie Create a position independent executable -shared Create a shared library -x Specify the language of the following input files Permissible languages include: c c++ assembler none 'none' means revert to the default behavior of guessing the language based on the file's extension Options starting with -g, -f, -m, -O, -W, or --param are automatically passed on to the various sub-processes invoked by g++. In order to pass other options on to these processes the -W options must be used. For bug reporting instructions, please see: . Trying Cxx compiler flag -Wall sh: mpicxx -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -Wall -fPIC /tmp/petsc-U9YCMv/config.setCompilers/conftest.cc Executing: mpicxx -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -Wall -fPIC /tmp/petsc-U9YCMv/config.setCompilers/conftest.cc sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Added Cxx compiler flag -Wall Trying Cxx compiler flag -Wwrite-strings sh: mpicxx -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -Wall -Wwrite-strings -fPIC /tmp/petsc-U9YCMv/config.setCompilers/conftest.cc Executing: mpicxx -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -Wall -Wwrite-strings -fPIC /tmp/petsc-U9YCMv/config.setCompilers/conftest.cc sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Added Cxx compiler flag -Wwrite-strings Trying Cxx compiler flag -Wno-strict-aliasing sh: mpicxx -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -Wall -Wwrite-strings -Wno-strict-aliasing -fPIC /tmp/petsc-U9YCMv/config.setCompilers/conftest.cc Executing: mpicxx -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -Wall -Wwrite-strings -Wno-strict-aliasing -fPIC /tmp/petsc-U9YCMv/config.setCompilers/conftest.cc sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Added Cxx compiler flag -Wno-strict-aliasing Trying Cxx compiler flag -Wno-unknown-pragmas sh: mpicxx -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -fPIC /tmp/petsc-U9YCMv/config.setCompilers/conftest.cc Executing: mpicxx -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -fPIC /tmp/petsc-U9YCMv/config.setCompilers/conftest.cc sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Added Cxx compiler flag -Wno-unknown-pragmas sh: mpicxx -show Executing: mpicxx -show sh: g++ -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g -fPIC -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpichcxx -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread Defined make macro "MPICXX_SHOW" to "g++ -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g -fPIC -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpichcxx -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread" sh: g++ --help Executing: g++ --help sh: Usage: g++ [options] file... Options: -pass-exit-codes Exit with highest error code from a phase --help Display this information --target-help Display target specific command line options --help={common|optimizers|params|target|warnings|[^]{joined|separate|undocumented}}[,...] Display specific types of command line options (Use '-v --help' to display command line options of sub-processes) --version Display compiler version information -dumpspecs Display all of the built in spec strings -dumpversion Display the version of the compiler -dumpmachine Display the compiler's target processor -print-search-dirs Display the directories in the compiler's search path -print-libgcc-file-name Display the name of the compiler's companion library -print-file-name= Display the full path to library -print-prog-name= Display the full path to compiler component -print-multiarch Display the target's normalized GNU triplet, used as a component in the library path -print-multi-directory Display the root directory for versions of libgcc -print-multi-lib Display the mapping between command line options and multiple library search directories -print-multi-os-directory Display the relative path to OS libraries -print-sysroot Display the target libraries directory -print-sysroot-headers-suffix Display the sysroot suffix used to find headers -Wa, Pass comma-separated on to the assembler -Wp, Pass comma-separated on to the preprocessor -Wl, Pass comma-separated on to the linker -Xassembler Pass on to the assembler -Xpreprocessor Pass on to the preprocessor -Xlinker Pass on to the linker -save-temps Do not delete intermediate files -save-temps= Do not delete intermediate files -no-canonical-prefixes Do not canonicalize paths when building relative prefixes to other gcc components -pipe Use pipes rather than intermediate files -time Time the execution of each subprocess -specs= Override built-in specs with the contents of -std= Assume that the input sources are for --sysroot= Use as the root directory for headers and libraries -B Add to the compiler's search paths -v Display the programs invoked by the compiler -### Like -v but options quoted and commands not executed -E Preprocess only; do not compile, assemble or link -S Compile only; do not assemble or link -c Compile and assemble, but do not link -o Place the output into -pie Create a position independent executable -shared Create a shared library -x Specify the language of the following input files Permissible languages include: c c++ assembler none 'none' means revert to the default behavior of guessing the language based on the file's extension Options starting with -g, -f, -m, -O, -W, or --param are automatically passed on to the various sub-processes invoked by g++. In order to pass other options on to these processes the -W options must be used. For bug reporting instructions, please see: . Trying Cxx compiler flag -g sh: mpicxx -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g -fPIC /tmp/petsc-U9YCMv/config.setCompilers/conftest.cc Executing: mpicxx -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g -fPIC /tmp/petsc-U9YCMv/config.setCompilers/conftest.cc sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Added Cxx compiler flag -g Popping language Cxx Pushing language FC sh: mpif90 --version Executing: mpif90 --version sh: GNU Fortran (Ubuntu/Linaro 4.7.3-1ubuntu1) 4.7.3 Copyright (C) 2012 Free Software Foundation, Inc. GNU Fortran comes with NO WARRANTY, to the extent permitted by law. You may redistribute copies of GNU Fortran under the terms of the GNU General Public License. For more information about these matters, see the file named COPYING getCompilerVersion: mpif90 GNU Fortran (Ubuntu/Linaro 4.7.3-1ubuntu1) 4.7.3 sh: mpif90 -show Executing: mpif90 -show sh: gfortran -fPIC -Wall -Wno-unused-variable -Wno-unused-dummy-argument -g -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpichf90 -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread Defined make macro "MPIFC_SHOW" to "gfortran -fPIC -Wall -Wno-unused-variable -Wno-unused-dummy-argument -g -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpichf90 -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread" sh: gfortran --help Executing: gfortran --help sh: Usage: gfortran [options] file... Options: -pass-exit-codes Exit with highest error code from a phase --help Display this information --target-help Display target specific command line options --help={common|optimizers|params|target|warnings|[^]{joined|separate|undocumented}}[,...] Display specific types of command line options (Use '-v --help' to display command line options of sub-processes) --version Display compiler version information -dumpspecs Display all of the built in spec strings -dumpversion Display the version of the compiler -dumpmachine Display the compiler's target processor -print-search-dirs Display the directories in the compiler's search path -print-libgcc-file-name Display the name of the compiler's companion library -print-file-name= Display the full path to library -print-prog-name= Display the full path to compiler component -print-multiarch Display the target's normalized GNU triplet, used as a component in the library path -print-multi-directory Display the root directory for versions of libgcc -print-multi-lib Display the mapping between command line options and multiple library search directories -print-multi-os-directory Display the relative path to OS libraries -print-sysroot Display the target libraries directory -print-sysroot-headers-suffix Display the sysroot suffix used to find headers -Wa, Pass comma-separated on to the assembler -Wp, Pass comma-separated on to the preprocessor -Wl, Pass comma-separated on to the linker -Xassembler Pass on to the assembler -Xpreprocessor Pass on to the preprocessor -Xlinker Pass on to the linker -save-temps Do not delete intermediate files -save-temps= Do not delete intermediate files -no-canonical-prefixes Do not canonicalize paths when building relative prefixes to other gcc components -pipe Use pipes rather than intermediate files -time Time the execution of each subprocess -specs= Override built-in specs with the contents of -std= Assume that the input sources are for --sysroot= Use as the root directory for headers and libraries -B Add to the compiler's search paths -v Display the programs invoked by the compiler -### Like -v but options quoted and commands not executed -E Preprocess only; do not compile, assemble or link -S Compile only; do not assemble or link -c Compile and assemble, but do not link -o Place the output into -pie Create a position independent executable -shared Create a shared library -x Specify the language of the following input files Permissible languages include: c c++ assembler none 'none' means revert to the default behavior of guessing the language based on the file's extension Options starting with -g, -f, -m, -O, -W, or --param are automatically passed on to the various sub-processes invoked by gfortran. In order to pass other options on to these processes the -W options must be used. For bug reporting instructions, please see: . sh: gfortran --version Executing: gfortran --version sh: GNU Fortran (Ubuntu/Linaro 4.7.3-1ubuntu1) 4.7.3 Copyright (C) 2012 Free Software Foundation, Inc. GNU Fortran comes with NO WARRANTY, to the extent permitted by law. You may redistribute copies of GNU Fortran under the terms of the GNU General Public License. For more information about these matters, see the file named COPYING sh: gfortran --version Executing: gfortran --version sh: GNU Fortran (Ubuntu/Linaro 4.7.3-1ubuntu1) 4.7.3 Copyright (C) 2012 Free Software Foundation, Inc. GNU Fortran comes with NO WARRANTY, to the extent permitted by law. You may redistribute copies of GNU Fortran under the terms of the GNU General Public License. For more information about these matters, see the file named COPYING Trying FC compiler flag -Wall sh: mpif90 -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -fPIC -Wall /tmp/petsc-U9YCMv/config.setCompilers/conftest.F Executing: mpif90 -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -fPIC -Wall /tmp/petsc-U9YCMv/config.setCompilers/conftest.F sh: Successful compile: Source: program main end Added FC compiler flag -Wall Trying FC compiler flag -Wno-unused-variable sh: mpif90 -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -fPIC -Wall -Wno-unused-variable /tmp/petsc-U9YCMv/config.setCompilers/conftest.F Executing: mpif90 -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -fPIC -Wall -Wno-unused-variable /tmp/petsc-U9YCMv/config.setCompilers/conftest.F sh: Successful compile: Source: program main end Added FC compiler flag -Wno-unused-variable Trying FC compiler flag -Wno-unused-dummy-argument sh: mpif90 -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -fPIC -Wall -Wno-unused-variable -Wno-unused-dummy-argument /tmp/petsc-U9YCMv/config.setCompilers/conftest.F Executing: mpif90 -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -fPIC -Wall -Wno-unused-variable -Wno-unused-dummy-argument /tmp/petsc-U9YCMv/config.setCompilers/conftest.F sh: Successful compile: Source: program main end Added FC compiler flag -Wno-unused-dummy-argument sh: mpif90 -show Executing: mpif90 -show sh: gfortran -fPIC -Wall -Wno-unused-variable -Wno-unused-dummy-argument -g -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpichf90 -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread Defined make macro "MPIFC_SHOW" to "gfortran -fPIC -Wall -Wno-unused-variable -Wno-unused-dummy-argument -g -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpichf90 -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread" sh: gfortran --help Executing: gfortran --help sh: Usage: gfortran [options] file... Options: -pass-exit-codes Exit with highest error code from a phase --help Display this information --target-help Display target specific command line options --help={common|optimizers|params|target|warnings|[^]{joined|separate|undocumented}}[,...] Display specific types of command line options (Use '-v --help' to display command line options of sub-processes) --version Display compiler version information -dumpspecs Display all of the built in spec strings -dumpversion Display the version of the compiler -dumpmachine Display the compiler's target processor -print-search-dirs Display the directories in the compiler's search path -print-libgcc-file-name Display the name of the compiler's companion library -print-file-name= Display the full path to library -print-prog-name= Display the full path to compiler component -print-multiarch Display the target's normalized GNU triplet, used as a component in the library path -print-multi-directory Display the root directory for versions of libgcc -print-multi-lib Display the mapping between command line options and multiple library search directories -print-multi-os-directory Display the relative path to OS libraries -print-sysroot Display the target libraries directory -print-sysroot-headers-suffix Display the sysroot suffix used to find headers -Wa, Pass comma-separated on to the assembler -Wp, Pass comma-separated on to the preprocessor -Wl, Pass comma-separated on to the linker -Xassembler Pass on to the assembler -Xpreprocessor Pass on to the preprocessor -Xlinker Pass on to the linker -save-temps Do not delete intermediate files -save-temps= Do not delete intermediate files -no-canonical-prefixes Do not canonicalize paths when building relative prefixes to other gcc components -pipe Use pipes rather than intermediate files -time Time the execution of each subprocess -specs= Override built-in specs with the contents of -std= Assume that the input sources are for --sysroot= Use as the root directory for headers and libraries -B Add to the compiler's search paths -v Display the programs invoked by the compiler -### Like -v but options quoted and commands not executed -E Preprocess only; do not compile, assemble or link -S Compile only; do not assemble or link -c Compile and assemble, but do not link -o Place the output into -pie Create a position independent executable -shared Create a shared library -x Specify the language of the following input files Permissible languages include: c c++ assembler none 'none' means revert to the default behavior of guessing the language based on the file's extension Options starting with -g, -f, -m, -O, -W, or --param are automatically passed on to the various sub-processes invoked by gfortran. In order to pass other options on to these processes the -W options must be used. For bug reporting instructions, please see: . Trying FC compiler flag -g sh: mpif90 -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -fPIC -Wall -Wno-unused-variable -Wno-unused-dummy-argument -g /tmp/petsc-U9YCMv/config.setCompilers/conftest.F Executing: mpif90 -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -fPIC -Wall -Wno-unused-variable -Wno-unused-dummy-argument -g /tmp/petsc-U9YCMv/config.setCompilers/conftest.F sh: Successful compile: Source: program main end Added FC compiler flag -g Popping language FC ================================================================================ TEST configureDebugging from PETSc.utilities.debugging(/home/hills/seska-hills/packages/petsc-3.4.2/config/PETSc/utilities/debugging.py:25) TESTING: configureDebugging from PETSc.utilities.debugging(config/PETSc/utilities/debugging.py:25) Defined "USE_ERRORCHECKING" to "1" ================================================================================ TEST configureArchitecture from PETSc.utilities.arch(/home/hills/seska-hills/packages/petsc-3.4.2/config/PETSc/utilities/arch.py:32) TESTING: configureArchitecture from PETSc.utilities.arch(config/PETSc/utilities/arch.py:32) Checks PETSC_ARCH and sets if not set Defined "ARCH" to ""linux-gnu-cxx-opt"" ================================================================================ TEST configureBmakeDir from PETSc.utilities.bmakeDir(/home/hills/seska-hills/packages/petsc-3.4.2/config/PETSc/utilities/bmakeDir.py:26) TESTING: configureBmakeDir from PETSc.utilities.bmakeDir(config/PETSc/utilities/bmakeDir.py:26) Makes $PETSC_ARCH and subdirectories if it does not exist Changed persistence directory to linux-gnu-cxx-opt/conf ================================================================================ TEST checkSharedDynamicPicOptions from PETSc.utilities.sharedLibraries(/home/hills/seska-hills/packages/petsc-3.4.2/config/PETSc/utilities/sharedLibraries.py:42) TESTING: checkSharedDynamicPicOptions from PETSc.utilities.sharedLibraries(config/PETSc/utilities/sharedLibraries.py:42) ================================================================================ TEST configureSharedLibraries from PETSc.utilities.sharedLibraries(/home/hills/seska-hills/packages/petsc-3.4.2/config/PETSc/utilities/sharedLibraries.py:63) TESTING: configureSharedLibraries from PETSc.utilities.sharedLibraries(config/PETSc/utilities/sharedLibraries.py:63) Checks whether shared libraries should be used, for which you must - Specify --with-shared-libraries - Have found a working shared linker Defines PETSC_USE_SHARED_LIBRARIES if they are used Defined make rule "shared_arch" with dependencies "shared_linux" and code [] Defined make macro "BUILDSHAREDLIB" to "yes" Defined "HAVE_SHARED_LIBRARIES" to "1" Defined "USE_SHARED_LIBRARIES" to "1" ================================================================================ TEST configureDynamicLibraries from PETSc.utilities.sharedLibraries(/home/hills/seska-hills/packages/petsc-3.4.2/config/PETSc/utilities/sharedLibraries.py:102) TESTING: configureDynamicLibraries from PETSc.utilities.sharedLibraries(config/PETSc/utilities/sharedLibraries.py:102) Checks whether dynamic loading should be used, for which you must - Specify --with-dynamic-loading - Have found a working dynamic linker (with dlfcn.h and libdl) Defines PETSC_USE_DYNAMIC_LIBRARIES if they are used Defined "HAVE_DYNAMIC_LIBRARIES" to "1" Dynamic loading - disabled sh: tau_cc.sh --help Executing: tau_cc.sh --help sh: Usage: tau_compiler.sh -optVerbose Turn on verbose debugging message -optMemDbg Enable TAU's runtime memory debugger -optDetectMemoryLeaks Synonym for -optMemDbg -optPdtDir="" PDT architecture directory. Typically $(PDTDIR)/$(PDTARCHDIR) -optPdtF95Opts="" Options for Fortran parser in PDT (f95parse) -optPdtF95Reset="" Reset options to the Fortran parser to the given list -optPdtCOpts="" Options for C parser in PDT (cparse). Typically $(TAU_MPI_INCLUDE) $(TAU_INCLUDE) $(TAU_DEFS) -optPdtCReset="" Reset options to the C parser to the given list -optPdtCxxOpts="" Options for C++ parser in PDT (cxxparse). Typically $(TAU_MPI_INCLUDE) $(TAU_INCLUDE) $(TAU_DEFS) -optPdtCxxReset="" Reset options to the C++ parser to the given list -optPdtF90Parser="" Specify a different Fortran parser. For e.g., f90parse instead of f95parse -optPdtGnuFortranParser Specify the GNU gfortran PDT parser gfparse instead of f95parse -optPdtCleanscapeParser Specify the Cleanscape Fortran parser -optPdtUser="" Optional arguments for parsing source code -optTauInstr="" Specify location of tau_instrumentor. Typically $(TAUROOT)/$(CONFIG_ARCH)/bin/tau_instrumentor -optPreProcess Preprocess the source code before parsing. Uses /usr/bin/cpp -P by default. -optContinueBeforeOMP Insert a CONTINUE statement before !$OMP directives. -optCPP="" Specify an alternative preprocessor and pre-process the sources. -optCPPOpts="" Specify additional options to the C pre-processor. -optCPPReset="" Reset C preprocessor options to the specified list. -optTauSelectFile="" Specify selective instrumentation file for tau_instrumentor. -optTauWrapFile="" Specify path to the link_options.tau file generated by tau_wrap -optTrackIO Specify wrapping of POSIX I/O calls at link time. -optTrackUPCR Specify wrapping of UPC runtime calls at link time. -optTrackDMAPP Specify wrapping of Cray DMAPP library calls at link time. -optTrackPthread Specify wrapping of Pthread library calls at link time. -optTrackGOMP Specify wrapping of GOMP library calls at link time. (default) -optNoTrackGOMP Disable wrapping of GOMP library calls at link time. -optTrackMPCThread Specify wrapping of MPC Thread library calls at link time. -optWrappersDir="" Specify the location of the link wrappers directory. -optPDBFile="" Specify PDB file for tau_instrumentor. Skips parsing stage. -optTau="" Specify options for tau_instrumentor -optCompile="" Options passed to the compiler by the user. -optTauDefs="" Options passed to the compiler by TAU. Typically $(TAU_DEFS) -optTauIncludes="" Options passed to the compiler by TAU. Typically $(TAU_MPI_INCLUDE) $(TAU_INCLUDE) -optIncludeMemory="" Flags for replacement of malloc/free. Typically -I$(TAU_DIR)/include/TauMemory -optReset="" Reset options to the compiler to the given list -optLinking="" Options passed to the linker. Typically $(TAU_MPI_FLIBS) $(TAU_LIBS) $(TAU_CXXLIBS) -optLinkReset="" Reset options to the linker to the given list -optLinkPreserveLib="" Libraries which TAU should preserve the order of on the link line see "Moving these libraries to the end of the link line:". Default: none. -optTauCC="" Specifies the C compiler used by TAU -optTauUseCXXForC Specifies the use of a C++ compiler for compiling C code -optUseReturnFix Specifies the use of a bug fix with ROSE parser using EDG v3.x -optOpariTool="" Specifies the location of the Opari tool -optLinkOnly Disable instrumentation during compilation, do link in the TAU libs -optOpariDir="" Specifies the location of the Opari directory -optOpariOpts="" Specifies optional arguments to the Opari tool -optOpariNoInit="" Do not initlize the POMP2 regions. -optOpariLibs="" Specifies the libraries that have POMP2 regions. (Overrides optOpariNoInit -optOpariReset="" Resets options passed to the Opari tool -optOpari2Tool="" Specifies the location of the Opari tool -optOpari2ConfigTool="" Specifies the location of the Opari tool -optOpari2Opts="" Specifies optional arguments to the Opari tool -optOpari2Reset="" Resets options passed to the Opari tool -optOpari2Dir="" Specifies the location of the Opari directory -optNoMpi Removes -l*mpi* libraries during linking -optMpi Does not remove -l*mpi* libraries during linking (default) -optNoRevert Exit on error. Does not revert to the original compilation rule on error. -optRevert Revert to the original compilation rule on error (default). -optNoCompInst Do not revert to compiler instrumentation if source instrumentation fails. -optKeepFiles Does not remove intermediate .pdb and .inst.* files -optAppCC="" Specifies the fallback C compiler. -optAppCXX="" Specifies the fallback C++ compiler. -optAppF90="" Specifies the fallback F90 compiler. -optShared Use shared library version of TAU. -optCompInst Use compiler-based instrumentation. -optPDTInst Use PDT-based instrumentation. -optHeaderInst Enable instrumentation of headers -optDisableHeaderInst Disable instrumentation of headers -optFixHashIf -optMICOffload Links code for Intel MIC offloading, requires both host and MIC TAU libraries ================================================================================ TEST checkRestrict from config.compilers(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/compilers.py:134) TESTING: checkRestrict from config.compilers(config/BuildSystem/config/compilers.py:134) Check for the C/CXX restrict keyword Pushing language C All intermediate test results are stored in /tmp/petsc-U9YCMv/config.compilers sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.compilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.compilers/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.compilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.compilers/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.compilers/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.compilers Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.compilers/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.compilers -o /tmp/petsc-U9YCMv/config.compilers/conftest.o Error: Compilation Failed Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.compilers -o /tmp/petsc-U9YCMv/config.compilers/conftest.o Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g /tmp/petsc-U9YCMv/config.compilers/conftest.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/config.compilers -o /tmp/petsc-U9YCMv/config.compilers/conftest.o Error: Compilation Failed Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -c -fPIC -g /tmp/petsc-U9YCMv/config.compilers/conftest.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/config.compilers -o /tmp/petsc-U9YCMv/config.compilers/conftest.o Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Possible ERROR while running compiler: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.compilers/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.compilers Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.compilers/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.compilers -o /tmp/petsc-U9YCMv/config.compilers/conftest.o Error: Compilation Failed Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.compilers -o /tmp/petsc-U9YCMv/config.compilers/conftest.o Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g /tmp/petsc-U9YCMv/config.compilers/conftest.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/config.compilers -o /tmp/petsc-U9YCMv/config.compilers/conftest.o Error: Compilation Failed Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -c -fPIC -g /tmp/petsc-U9YCMv/config.compilers/conftest.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/config.compilers -o /tmp/petsc-U9YCMv/config.compilers/conftest.o Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue ret = 256 error message = {/tmp/petsc-U9YCMv/config.compilers/conftest.c: In function ‘main’: /tmp/petsc-U9YCMv/config.compilers/conftest.c:5:18: error: expected ‘=’, ‘,’, ‘;’, ‘asm’ or ‘__attribute__’ before ‘x’ /tmp/petsc-U9YCMv/config.compilers/conftest.c:5:18: error: ‘x’ undeclared (first use in this function) /tmp/petsc-U9YCMv/config.compilers/conftest.c:5:18: note: each undeclared identifier is reported only once for each function it appears in /tmp/petsc-U9YCMv/config.compilers/conftest.c: In function ‘main’: /tmp/petsc-U9YCMv/config.compilers/conftest.c:5:18: error: expected ‘=’, ‘,’, ‘;’, ‘asm’ or ‘__attribute__’ before ‘x’ /tmp/petsc-U9YCMv/config.compilers/conftest.c:5:18: error: ‘x’ undeclared (first use in this function) /tmp/petsc-U9YCMv/config.compilers/conftest.c:5:18: note: each undeclared identifier is reported only once for each function it appears in make: *** [all] Error 1 } Source: #include "confdefs.h" #include "conffix.h" int main() { float * restrict x;; return 0; } sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.compilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.compilers -fPIC -g /tmp/petsc-U9YCMv/config.compilers/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.compilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.compilers -fPIC -g /tmp/petsc-U9YCMv/config.compilers/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.compilers/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.compilers -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.compilers Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.compilers/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.compilers -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.compilers -o /tmp/petsc-U9YCMv/config.compilers/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { float * __restrict__ x;; return 0; } compilers: Set C restrict keyword to __restrict__ Defined "C_RESTRICT" to " __restrict__" Popping language C ================================================================================ TEST checkCFormatting from config.compilers(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/compilers.py:306) TESTING: checkCFormatting from config.compilers(config/BuildSystem/config/compilers.py:306) Activate format string checking if using the GNU compilers ================================================================================ TEST checkCStaticInline from config.compilers(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/compilers.py:105) TESTING: checkCStaticInline from config.compilers(config/BuildSystem/config/compilers.py:105) Check for C keyword: static inline Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.compilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.compilers -fPIC -g /tmp/petsc-U9YCMv/config.compilers/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.compilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.compilers -fPIC -g /tmp/petsc-U9YCMv/config.compilers/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.compilers/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.compilers -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.compilers Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.compilers/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.compilers -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.compilers -o /tmp/petsc-U9YCMv/config.compilers/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" static inline int foo(int a) {return a;} int main() { int i = foo(1);; return 0; } compilers: Set C StaticInline keyword to static inline Popping language C Defined "C_STATIC_INLINE" to "static inline" ================================================================================ TEST checkDynamicLoadFlag from config.compilers(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/compilers.py:317) TESTING: checkDynamicLoadFlag from config.compilers(config/BuildSystem/config/compilers.py:317) Checks that dlopen() takes RTLD_XXX, and defines PETSC_HAVE_RTLD_XXX if it does sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.compilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.compilers -fPIC -g /tmp/petsc-U9YCMv/config.compilers/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.compilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.compilers -fPIC -g /tmp/petsc-U9YCMv/config.compilers/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.compilers/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.compilers -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.compilers Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.compilers/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.compilers -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.compilers -o /tmp/petsc-U9YCMv/config.compilers/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include char *libname; int main() { dlopen(libname, RTLD_LAZY); ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.compilers/conftest -fPIC -g /tmp/petsc-U9YCMv/config.compilers/conftest.o -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.compilers/conftest -fPIC -g /tmp/petsc-U9YCMv/config.compilers/conftest.o -ldl sh: Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.compilers/conftest -fPIC -g /tmp/petsc-U9YCMv/config.compilers/conftest.o -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt Defined "HAVE_RTLD_LAZY" to "1" sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.compilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.compilers -fPIC -g /tmp/petsc-U9YCMv/config.compilers/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.compilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.compilers -fPIC -g /tmp/petsc-U9YCMv/config.compilers/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.compilers/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.compilers -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.compilers Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.compilers/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.compilers -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.compilers -o /tmp/petsc-U9YCMv/config.compilers/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include char *libname; int main() { dlopen(libname, RTLD_NOW); ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.compilers/conftest -fPIC -g /tmp/petsc-U9YCMv/config.compilers/conftest.o -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.compilers/conftest -fPIC -g /tmp/petsc-U9YCMv/config.compilers/conftest.o -ldl sh: Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.compilers/conftest -fPIC -g /tmp/petsc-U9YCMv/config.compilers/conftest.o -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt Defined "HAVE_RTLD_NOW" to "1" sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.compilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.compilers -fPIC -g /tmp/petsc-U9YCMv/config.compilers/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.compilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.compilers -fPIC -g /tmp/petsc-U9YCMv/config.compilers/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.compilers/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.compilers -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.compilers Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.compilers/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.compilers -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.compilers -o /tmp/petsc-U9YCMv/config.compilers/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include char *libname; int main() { dlopen(libname, RTLD_LOCAL); ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.compilers/conftest -fPIC -g /tmp/petsc-U9YCMv/config.compilers/conftest.o -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.compilers/conftest -fPIC -g /tmp/petsc-U9YCMv/config.compilers/conftest.o -ldl sh: Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.compilers/conftest -fPIC -g /tmp/petsc-U9YCMv/config.compilers/conftest.o -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt Defined "HAVE_RTLD_LOCAL" to "1" sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.compilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.compilers -fPIC -g /tmp/petsc-U9YCMv/config.compilers/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.compilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.compilers -fPIC -g /tmp/petsc-U9YCMv/config.compilers/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.compilers/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.compilers -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.compilers Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.compilers/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.compilers -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.compilers -o /tmp/petsc-U9YCMv/config.compilers/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include char *libname; int main() { dlopen(libname, RTLD_GLOBAL); ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.compilers/conftest -fPIC -g /tmp/petsc-U9YCMv/config.compilers/conftest.o -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.compilers/conftest -fPIC -g /tmp/petsc-U9YCMv/config.compilers/conftest.o -ldl sh: Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.compilers/conftest -fPIC -g /tmp/petsc-U9YCMv/config.compilers/conftest.o -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt Defined "HAVE_RTLD_GLOBAL" to "1" ================================================================================ TEST checkCLibraries from config.compilers(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/compilers.py:161) TESTING: checkCLibraries from config.compilers(config/BuildSystem/config/compilers.py:161) Determines the libraries needed to link with C Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.compilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.compilers -fPIC -g /tmp/petsc-U9YCMv/config.compilers/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.compilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.compilers -fPIC -g /tmp/petsc-U9YCMv/config.compilers/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.compilers/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.compilers -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.compilers Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.compilers/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.compilers -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.compilers -o /tmp/petsc-U9YCMv/config.compilers/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.compilers/conftest -v -fPIC -g /tmp/petsc-U9YCMv/config.compilers/conftest.o -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.compilers/conftest -v -fPIC -g /tmp/petsc-U9YCMv/config.compilers/conftest.o -ldl sh: Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.compilers/conftest -v -fPIC -g /tmp/petsc-U9YCMv/config.compilers/conftest.o -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt Possible ERROR while running linker: Using built-in specs. COLLECT_GCC=gcc COLLECT_LTO_WRAPPER=/usr/lib/gcc/x86_64-linux-gnu/4.7/lto-wrapper Target: x86_64-linux-gnu Configured with: ../src/configure -v --with-pkgversion='Ubuntu/Linaro 4.7.3-1ubuntu1' --with-bugurl=file:///usr/share/doc/gcc-4.7/README.Bugs --enable-languages=c,c++,go,fortran,objc,obj-c++ --prefix=/usr --program-suffix=-4.7 --enable-shared --enable-linker-build-id --libexecdir=/usr/lib --without-included-gettext --enable-threads=posix --with-gxx-include-dir=/usr/include/c++/4.7 --libdir=/usr/lib --enable-nls --with-sysroot=/ --enable-clocale=gnu --enable-libstdcxx-debug --enable-libstdcxx-time=yes --enable-gnu-unique-object --enable-plugin --with-system-zlib --enable-objc-gc --with-cloog --enable-cloog-backend=ppl --disable-cloog-version-check --disable-ppl-version-check --enable-multiarch --disable-werror --with-arch-32=i686 --with-abi=m64 --with-multilib-list=m32,m64,mx32 --with-tune=generic --enable-checking=release --build=x86_64-linux-gnu --host=x86_64-linux-gnu --target=x86_64-linux-gnu Thread model: posix gcc version 4.7.3 (Ubuntu/Linaro 4.7.3-1ubuntu1) COMPILER_PATH=/usr/lib/gcc/x86_64-linux-gnu/4.7/:/usr/lib/gcc/x86_64-linux-gnu/4.7/:/usr/lib/gcc/x86_64-linux-gnu/:/usr/lib/gcc/x86_64-linux-gnu/4.7/:/usr/lib/gcc/x86_64-linux-gnu/ LIBRARY_PATH=/usr/lib/gcc/x86_64-linux-gnu/4.7/:/usr/lib/gcc/x86_64-linux-gnu/4.7/../../../x86_64-linux-gnu/:/usr/lib/gcc/x86_64-linux-gnu/4.7/../../../../lib/:/lib/x86_64-linux-gnu/:/lib/../lib/:/usr/lib/x86_64-linux-gnu/:/usr/lib/../lib/:/usr/lib/gcc/x86_64-linux-gnu/4.7/../../../:/lib/:/usr/lib/ COLLECT_GCC_OPTIONS='-o' '/tmp/petsc-U9YCMv/config.compilers/conftest' '-v' '-g' '-L/home/hills/seska/packages/openmpi/lib' '-L/home/hills/seska/packages/tau/x86_64/lib' '-g3' '-O0' '-I' '/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include' '-L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib' '-L/home/hills/seska/packages/tau/x86_64/lib' '-L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib' '-L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64' '-L/home/hills/seska/packages/openmpi/lib' '-fPIC' '-Wall' '-Wwrite-strings' '-Wno-strict-aliasing' '-Wno-unknown-pragmas' '-g3' '-fno-inline' '-O0' '-I' '/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include' '-L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib' '-L/usr/lib/gcc/x86_64-linux-gnu/4.7/' '-L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt' '-mtune=generic' '-march=x86-64' /usr/lib/gcc/x86_64-linux-gnu/4.7/collect2 --sysroot=/ --build-id --eh-frame-hdr -m elf_x86_64 --hash-style=gnu --as-needed -dynamic-linker /lib64/ld-linux-x86-64.so.2 -z relro -o /tmp/petsc-U9YCMv/config.compilers/conftest /usr/lib/gcc/x86_64-linux-gnu/4.7/../../../x86_64-linux-gnu/crt1.o /usr/lib/gcc/x86_64-linux-gnu/4.7/../../../x86_64-linux-gnu/crti.o /usr/lib/gcc/x86_64-linux-gnu/4.7/crtbegin.o -L/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/4.7/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/4.7/../../.. /tmp/petsc-U9YCMv/config.compilers/conftest.o -ldl -lmpi_f77 -lTauMpi-mpi-pdt -rpath /home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -rpath /home/hills/seska/packages/openmpi/lib -ltau-mpi-pdt -lbfd -liberty --export-dynamic -lrt -rpath /home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -rpath /home/hills/seska/packages/openmpi/lib -ldl -lm -lstdc++ -lgcc_s -lgcc --as-needed -lgcc_s --no-as-needed -lc -lgcc --as-needed -lgcc_s --no-as-needed /usr/lib/gcc/x86_64-linux-gnu/4.7/crtend.o /usr/lib/gcc/x86_64-linux-gnu/4.7/../../../x86_64-linux-gnu/crtn.o output: Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.compilers/conftest -v -fPIC -g /tmp/petsc-U9YCMv/config.compilers/conftest.o -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt error message = {Using built-in specs. COLLECT_GCC=gcc COLLECT_LTO_WRAPPER=/usr/lib/gcc/x86_64-linux-gnu/4.7/lto-wrapper Target: x86_64-linux-gnu Configured with: ../src/configure -v --with-pkgversion='Ubuntu/Linaro 4.7.3-1ubuntu1' --with-bugurl=file:///usr/share/doc/gcc-4.7/README.Bugs --enable-languages=c,c++,go,fortran,objc,obj-c++ --prefix=/usr --program-suffix=-4.7 --enable-shared --enable-linker-build-id --libexecdir=/usr/lib --without-included-gettext --enable-threads=posix --with-gxx-include-dir=/usr/include/c++/4.7 --libdir=/usr/lib --enable-nls --with-sysroot=/ --enable-clocale=gnu --enable-libstdcxx-debug --enable-libstdcxx-time=yes --enable-gnu-unique-object --enable-plugin --with-system-zlib --enable-objc-gc --with-cloog --enable-cloog-backend=ppl --disable-cloog-version-check --disable-ppl-version-check --enable-multiarch --disable-werror --with-arch-32=i686 --with-abi=m64 --with-multilib-list=m32,m64,mx32 --with-tune=generic --enable-checking=release --build=x86_64-linux-gnu --host=x86_64-linux-gnu --target=x86_64-linux-gnu Thread model: posix gcc version 4.7.3 (Ubuntu/Linaro 4.7.3-1ubuntu1) COMPILER_PATH=/usr/lib/gcc/x86_64-linux-gnu/4.7/:/usr/lib/gcc/x86_64-linux-gnu/4.7/:/usr/lib/gcc/x86_64-linux-gnu/:/usr/lib/gcc/x86_64-linux-gnu/4.7/:/usr/lib/gcc/x86_64-linux-gnu/ LIBRARY_PATH=/usr/lib/gcc/x86_64-linux-gnu/4.7/:/usr/lib/gcc/x86_64-linux-gnu/4.7/../../../x86_64-linux-gnu/:/usr/lib/gcc/x86_64-linux-gnu/4.7/../../../../lib/:/lib/x86_64-linux-gnu/:/lib/../lib/:/usr/lib/x86_64-linux-gnu/:/usr/lib/../lib/:/usr/lib/gcc/x86_64-linux-gnu/4.7/../../../:/lib/:/usr/lib/ COLLECT_GCC_OPTIONS='-o' '/tmp/petsc-U9YCMv/config.compilers/conftest' '-v' '-g' '-L/home/hills/seska/packages/openmpi/lib' '-L/home/hills/seska/packages/tau/x86_64/lib' '-g3' '-O0' '-I' '/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include' '-L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib' '-L/home/hills/seska/packages/tau/x86_64/lib' '-L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib' '-L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64' '-L/home/hills/seska/packages/openmpi/lib' '-fPIC' '-Wall' '-Wwrite-strings' '-Wno-strict-aliasing' '-Wno-unknown-pragmas' '-g3' '-fno-inline' '-O0' '-I' '/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include' '-L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib' '-L/usr/lib/gcc/x86_64-linux-gnu/4.7/' '-L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt' '-mtune=generic' '-march=x86-64' /usr/lib/gcc/x86_64-linux-gnu/4.7/collect2 --sysroot=/ --build-id --eh-frame-hdr -m elf_x86_64 --hash-style=gnu --as-needed -dynamic-linker /lib64/ld-linux-x86-64.so.2 -z relro -o /tmp/petsc-U9YCMv/config.compilers/conftest /usr/lib/gcc/x86_64-linux-gnu/4.7/../../../x86_64-linux-gnu/crt1.o /usr/lib/gcc/x86_64-linux-gnu/4.7/../../../x86_64-linux-gnu/crti.o /usr/lib/gcc/x86_64-linux-gnu/4.7/crtbegin.o -L/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/4.7/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/4.7/../../.. /tmp/petsc-U9YCMv/config.compilers/conftest.o -ldl -lmpi_f77 -lTauMpi-mpi-pdt -rpath /home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -rpath /home/hills/seska/packages/openmpi/lib -ltau-mpi-pdt -lbfd -liberty --export-dynamic -lrt -rpath /home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -rpath /home/hills/seska/packages/openmpi/lib -ldl -lm -lstdc++ -lgcc_s -lgcc --as-needed -lgcc_s --no-as-needed -lc -lgcc --as-needed -lgcc_s --no-as-needed /usr/lib/gcc/x86_64-linux-gnu/4.7/crtend.o /usr/lib/gcc/x86_64-linux-gnu/4.7/../../../x86_64-linux-gnu/crtn.o } Pushing language C Popping language C in tau_cc.sh -o /tmp/petsc-U9YCMv/config.compilers/conftest -v -fPIC -g /tmp/petsc-U9YCMv/config.compilers/conftest.o -ldl Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Popping language C compilers: Checking arg Debug: compilers: Unknown arg Debug: compilers: Checking arg Moving compilers: Unknown arg Moving compilers: Checking arg these compilers: Unknown arg these compilers: Checking arg libraries compilers: Unknown arg libraries compilers: Checking arg to compilers: Unknown arg to compilers: Checking arg the compilers: Unknown arg the compilers: Checking arg end compilers: Unknown arg end compilers: Checking arg of compilers: Unknown arg of compilers: Checking arg the compilers: Unknown arg the compilers: Checking arg link compilers: Unknown arg link compilers: Checking arg line: compilers: Unknown arg line: compilers: Checking arg Debug: compilers: Unknown arg Debug: compilers: Checking arg Linking compilers: Unknown arg Linking compilers: Checking arg with compilers: Unknown arg with compilers: Checking arg TAU compilers: Unknown arg TAU compilers: Checking arg Options compilers: Unknown arg Options compilers: Checking arg Executing> compilers: Unknown arg Executing> compilers: Checking arg gcc compilers: Unknown arg gcc compilers: Checking arg -o compilers: Unknown arg -o compilers: Checking arg /tmp/petsc-U9YCMv/config.compilers/conftest compilers: Unknown arg /tmp/petsc-U9YCMv/config.compilers/conftest compilers: Checking arg -v compilers: Unknown arg -v compilers: Checking arg -fPIC compilers: Unknown arg -fPIC compilers: Checking arg -g compilers: Unknown arg -g compilers: Checking arg /tmp/petsc-U9YCMv/config.compilers/conftest.o compilers: Unknown arg /tmp/petsc-U9YCMv/config.compilers/conftest.o compilers: Checking arg -ldl compilers: Found library : -ldl compilers: Checking arg -L/home/hills/seska/packages/openmpi/lib compilers: Found library directory: -L/home/hills/seska/packages/openmpi/lib compilers: Checking arg -lmpi_f77 compilers: Found library : -lmpi_f77 compilers: Checking arg -L/home/hills/seska/packages/tau/x86_64/lib compilers: Found library directory: -L/home/hills/seska/packages/tau/x86_64/lib compilers: Checking arg -lTauMpi-mpi-pdt compilers: Found library : -lTauMpi-mpi-pdt compilers: Checking arg -fPIC compilers: Unknown arg -fPIC compilers: Checking arg -Wall compilers: Unknown arg -Wall compilers: Checking arg -Wwrite-strings compilers: Unknown arg -Wwrite-strings compilers: Checking arg -Wno-strict-aliasing compilers: Unknown arg -Wno-strict-aliasing compilers: Checking arg -Wno-unknown-pragmas compilers: Unknown arg -Wno-unknown-pragmas compilers: Checking arg -g3 compilers: Unknown arg -g3 compilers: Checking arg -fno-inline compilers: Unknown arg -fno-inline compilers: Checking arg -O0 compilers: Unknown arg -O0 compilers: Checking arg -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include compilers: Unknown arg -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include compilers: Checking arg -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib compilers: Found library directory: -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib compilers: Checking arg -Wl,-rpath compilers: Unknown arg -Wl,-rpath compilers: Checking arg -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib compilers: Unknown arg -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib compilers: Checking arg -lmpich compilers: Found library : -lmpich compilers: Checking arg -lopa compilers: Found library : -lopa compilers: Checking arg -lmpl compilers: Found library : -lmpl compilers: Checking arg -lrt compilers: Found library : -lrt compilers: Checking arg -lpthread compilers: Found library : -lpthread compilers: Checking arg -lmpi compilers: Found library : -lmpi compilers: Checking arg -lmpi_cxx compilers: Found library : -lmpi_cxx compilers: Checking arg -lmpi_f90 compilers: Found library : -lmpi_f90 compilers: Checking arg -lmpi_f77 compilers: Checking arg -Wl,-rpath,/home/hills/seska/packages/openmpi/lib compilers: Unknown arg -Wl,-rpath,/home/hills/seska/packages/openmpi/lib compilers: Checking arg -L/home/hills/seska/packages/tau/x86_64/lib compilers: Found library directory: -L/home/hills/seska/packages/tau/x86_64/lib compilers: Checking arg -ltau-mpi-pdt compilers: Found library : -ltau-mpi-pdt compilers: Checking arg -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib compilers: Found library directory: -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib compilers: Checking arg -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 compilers: Found library directory: -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 compilers: Checking arg -lbfd compilers: Found library : -lbfd compilers: Checking arg -liberty compilers: Found library : -liberty compilers: Checking arg -Wl,--export-dynamic compilers: Unknown arg -Wl,--export-dynamic compilers: Checking arg -lrt compilers: Checking arg -L/home/hills/seska/packages/openmpi/lib compilers: Found library directory: -L/home/hills/seska/packages/openmpi/lib compilers: Checking arg -fPIC compilers: Unknown arg -fPIC compilers: Checking arg -Wall compilers: Unknown arg -Wall compilers: Checking arg -Wwrite-strings compilers: Unknown arg -Wwrite-strings compilers: Checking arg -Wno-strict-aliasing compilers: Unknown arg -Wno-strict-aliasing compilers: Checking arg -Wno-unknown-pragmas compilers: Unknown arg -Wno-unknown-pragmas compilers: Checking arg -g3 compilers: Unknown arg -g3 compilers: Checking arg -fno-inline compilers: Unknown arg -fno-inline compilers: Checking arg -O0 compilers: Unknown arg -O0 compilers: Checking arg -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include compilers: Unknown arg -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include compilers: Checking arg -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib compilers: Found library directory: -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib compilers: Checking arg -Wl,-rpath compilers: Unknown arg -Wl,-rpath compilers: Checking arg -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib compilers: Unknown arg -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib compilers: Checking arg -lmpich compilers: Checking arg -lopa compilers: Checking arg -lmpl compilers: Checking arg -lrt compilers: Checking arg -lpthread compilers: Checking arg -lmpi compilers: Checking arg -lmpi_cxx compilers: Checking arg -lmpi_f90 compilers: Checking arg -lmpi_f77 compilers: Checking arg -Wl,-rpath,/home/hills/seska/packages/openmpi/lib compilers: Unknown arg -Wl,-rpath,/home/hills/seska/packages/openmpi/lib compilers: Checking arg -ldl compilers: Checking arg -lm compilers: Checking arg -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ compilers: Found library directory: -L/usr/lib/gcc/x86_64-linux-gnu/4.7 compilers: Checking arg -lstdc++ compilers: Found library : -lstdc++ compilers: Checking arg -lgcc_s compilers: Found library : -lgcc_s compilers: Checking arg -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt compilers: Found library directory: -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt compilers: Checking arg Using compilers: Unknown arg Using compilers: Checking arg built-in compilers: Unknown arg built-in compilers: Checking arg specs. compilers: Unknown arg specs. compilers: Checking arg COLLECT_GCC=gcc compilers: Unknown arg COLLECT_GCC=gcc compilers: Checking arg COLLECT_LTO_WRAPPER=/usr/lib/gcc/x86_64-linux-gnu/4.7/lto-wrapper compilers: Unknown arg COLLECT_LTO_WRAPPER=/usr/lib/gcc/x86_64-linux-gnu/4.7/lto-wrapper compilers: Checking arg Target: compilers: Unknown arg Target: compilers: Checking arg x86_64-linux-gnu compilers: Unknown arg x86_64-linux-gnu compilers: Checking arg Configured compilers: Unknown arg Configured compilers: Checking arg with: compilers: Unknown arg with: compilers: Checking arg ../src/configure compilers: Unknown arg ../src/configure compilers: Checking arg -v compilers: Unknown arg -v compilers: Checking arg --with-pkgversion= compilers: Unknown arg --with-pkgversion= compilers: Checking arg --with-bugurl=file:///usr/share/doc/gcc-4.7/README.Bugs compilers: Unknown arg --with-bugurl=file:///usr/share/doc/gcc-4.7/README.Bugs compilers: Checking arg --enable-languages=c,c++,go,fortran,objc,obj-c++ compilers: Unknown arg --enable-languages=c,c++,go,fortran,objc,obj-c++ compilers: Checking arg --prefix=/usr compilers: Unknown arg --prefix=/usr compilers: Checking arg --program-suffix=-4.7 compilers: Unknown arg --program-suffix=-4.7 compilers: Checking arg --enable-shared compilers: Unknown arg --enable-shared compilers: Checking arg --enable-linker-build-id compilers: Unknown arg --enable-linker-build-id compilers: Checking arg --libexecdir=/usr/lib compilers: Unknown arg --libexecdir=/usr/lib compilers: Checking arg --without-included-gettext compilers: Unknown arg --without-included-gettext compilers: Checking arg --enable-threads=posix compilers: Unknown arg --enable-threads=posix compilers: Checking arg --with-gxx-include-dir=/usr/include/c++/4.7 compilers: Unknown arg --with-gxx-include-dir=/usr/include/c++/4.7 compilers: Checking arg --libdir=/usr/lib compilers: Unknown arg --libdir=/usr/lib compilers: Checking arg --enable-nls compilers: Unknown arg --enable-nls compilers: Checking arg --with-sysroot=/ compilers: Unknown arg --with-sysroot=/ compilers: Checking arg --enable-clocale=gnu compilers: Unknown arg --enable-clocale=gnu compilers: Checking arg --enable-libstdcxx-debug compilers: Unknown arg --enable-libstdcxx-debug compilers: Checking arg --enable-libstdcxx-time=yes compilers: Unknown arg --enable-libstdcxx-time=yes compilers: Checking arg --enable-gnu-unique-object compilers: Unknown arg --enable-gnu-unique-object compilers: Checking arg --enable-plugin compilers: Unknown arg --enable-plugin compilers: Checking arg --with-system-zlib compilers: Unknown arg --with-system-zlib compilers: Checking arg --enable-objc-gc compilers: Unknown arg --enable-objc-gc compilers: Checking arg --with-cloog compilers: Unknown arg --with-cloog compilers: Checking arg --enable-cloog-backend=ppl compilers: Unknown arg --enable-cloog-backend=ppl compilers: Checking arg --disable-cloog-version-check compilers: Unknown arg --disable-cloog-version-check compilers: Checking arg --disable-ppl-version-check compilers: Unknown arg --disable-ppl-version-check compilers: Checking arg --enable-multiarch compilers: Unknown arg --enable-multiarch compilers: Checking arg --disable-werror compilers: Unknown arg --disable-werror compilers: Checking arg --with-arch-32=i686 compilers: Unknown arg --with-arch-32=i686 compilers: Checking arg --with-abi=m64 compilers: Unknown arg --with-abi=m64 compilers: Checking arg --with-multilib-list=m32,m64,mx32 compilers: Unknown arg --with-multilib-list=m32,m64,mx32 compilers: Checking arg --with-tune=generic compilers: Unknown arg --with-tune=generic compilers: Checking arg --enable-checking=release compilers: Unknown arg --enable-checking=release compilers: Checking arg --build=x86_64-linux-gnu compilers: Unknown arg --build=x86_64-linux-gnu compilers: Checking arg --host=x86_64-linux-gnu compilers: Unknown arg --host=x86_64-linux-gnu compilers: Checking arg --target=x86_64-linux-gnu compilers: Unknown arg --target=x86_64-linux-gnu compilers: Checking arg Thread compilers: Unknown arg Thread compilers: Checking arg model: compilers: Unknown arg model: compilers: Checking arg posix compilers: Unknown arg posix compilers: Checking arg gcc compilers: Unknown arg gcc compilers: Checking arg version compilers: Unknown arg version compilers: Checking arg 4.7.3 compilers: Unknown arg 4.7.3 compilers: Checking arg (Ubuntu/Linaro compilers: Unknown arg (Ubuntu/Linaro compilers: Checking arg 4.7.3-1ubuntu1) compilers: Unknown arg 4.7.3-1ubuntu1) compilers: Checking arg COMPILER_PATH=/usr/lib/gcc/x86_64-linux-gnu/4.7/:/usr/lib/gcc/x86_64-linux-gnu/4.7/:/usr/lib/gcc/x86_64-linux-gnu/:/usr/lib/gcc/x86_64-linux-gnu/4.7/:/usr/lib/gcc/x86_64-linux-gnu/ compilers: Unknown arg COMPILER_PATH=/usr/lib/gcc/x86_64-linux-gnu/4.7/:/usr/lib/gcc/x86_64-linux-gnu/4.7/:/usr/lib/gcc/x86_64-linux-gnu/:/usr/lib/gcc/x86_64-linux-gnu/4.7/:/usr/lib/gcc/x86_64-linux-gnu/ compilers: Checking arg LIBRARY_PATH=/usr/lib/gcc/x86_64-linux-gnu/4.7/:/usr/lib/gcc/x86_64-linux-gnu/4.7/../../../x86_64-linux-gnu/:/usr/lib/gcc/x86_64-linux-gnu/4.7/../../../../lib/:/lib/x86_64-linux-gnu/:/lib/../lib/:/usr/lib/x86_64-linux-gnu/:/usr/lib/../lib/:/usr/lib/gcc/x86_64-linux-gnu/4.7/../../../:/lib/:/usr/lib/ compilers: Unknown arg LIBRARY_PATH=/usr/lib/gcc/x86_64-linux-gnu/4.7/:/usr/lib/gcc/x86_64-linux-gnu/4.7/../../../x86_64-linux-gnu/:/usr/lib/gcc/x86_64-linux-gnu/4.7/../../../../lib/:/lib/x86_64-linux-gnu/:/lib/../lib/:/usr/lib/x86_64-linux-gnu/:/usr/lib/../lib/:/usr/lib/gcc/x86_64-linux-gnu/4.7/../../../:/lib/:/usr/lib/ compilers: Checking arg COLLECT_GCC_OPTIONS= compilers: Unknown arg COLLECT_GCC_OPTIONS= compilers: Checking arg /usr/lib/gcc/x86_64-linux-gnu/4.7/collect2 compilers: Unknown arg /usr/lib/gcc/x86_64-linux-gnu/4.7/collect2 compilers: Checking arg --sysroot=/ compilers: Unknown arg --sysroot=/ compilers: Checking arg --build-id compilers: Unknown arg --build-id compilers: Checking arg --eh-frame-hdr compilers: Unknown arg --eh-frame-hdr compilers: Checking arg -m compilers: Unknown arg -m compilers: Checking arg elf_x86_64 compilers: Unknown arg elf_x86_64 compilers: Checking arg --hash-style=gnu compilers: Unknown arg --hash-style=gnu compilers: Checking arg --as-needed compilers: Unknown arg --as-needed compilers: Checking arg -dynamic-linker compilers: Unknown arg -dynamic-linker compilers: Checking arg /lib64/ld-linux-x86-64.so.2 compilers: Unknown arg /lib64/ld-linux-x86-64.so.2 compilers: Checking arg -z compilers: Unknown arg -z compilers: Checking arg relro compilers: Unknown arg relro compilers: Checking arg -o compilers: Unknown arg -o compilers: Checking arg /tmp/petsc-U9YCMv/config.compilers/conftest compilers: Unknown arg /tmp/petsc-U9YCMv/config.compilers/conftest compilers: Checking arg /usr/lib/gcc/x86_64-linux-gnu/4.7/../../../x86_64-linux-gnu/crt1.o compilers: Unknown arg /usr/lib/gcc/x86_64-linux-gnu/4.7/../../../x86_64-linux-gnu/crt1.o compilers: Checking arg /usr/lib/gcc/x86_64-linux-gnu/4.7/../../../x86_64-linux-gnu/crti.o compilers: Unknown arg /usr/lib/gcc/x86_64-linux-gnu/4.7/../../../x86_64-linux-gnu/crti.o compilers: Checking arg /usr/lib/gcc/x86_64-linux-gnu/4.7/crtbegin.o compilers: Unknown arg /usr/lib/gcc/x86_64-linux-gnu/4.7/crtbegin.o compilers: Checking arg -L/home/hills/seska/packages/openmpi/lib compilers: Found library directory: -L/home/hills/seska/packages/openmpi/lib compilers: Checking arg -L/home/hills/seska/packages/tau/x86_64/lib compilers: Found library directory: -L/home/hills/seska/packages/tau/x86_64/lib compilers: Checking arg -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib compilers: Found library directory: -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib compilers: Checking arg -L/home/hills/seska/packages/tau/x86_64/lib compilers: Found library directory: -L/home/hills/seska/packages/tau/x86_64/lib compilers: Checking arg -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib compilers: Found library directory: -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib compilers: Checking arg -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 compilers: Found library directory: -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 compilers: Checking arg -L/home/hills/seska/packages/openmpi/lib compilers: Found library directory: -L/home/hills/seska/packages/openmpi/lib compilers: Checking arg -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib compilers: Found library directory: -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib compilers: Checking arg -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ compilers: Found library directory: -L/usr/lib/gcc/x86_64-linux-gnu/4.7 compilers: Checking arg -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt compilers: Found library directory: -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt compilers: Checking arg -L/usr/lib/gcc/x86_64-linux-gnu/4.7 compilers: Found library directory: -L/usr/lib/gcc/x86_64-linux-gnu/4.7 compilers: Checking arg -L/usr/lib/gcc/x86_64-linux-gnu/4.7/../../../x86_64-linux-gnu compilers: Found library directory: -L/usr/lib/x86_64-linux-gnu compilers: Checking arg -L/usr/lib/gcc/x86_64-linux-gnu/4.7/../../../../lib compilers: Checking arg -L/lib/x86_64-linux-gnu compilers: Found library directory: -L/lib/x86_64-linux-gnu compilers: Checking arg -L/lib/../lib compilers: Checking arg -L/usr/lib/x86_64-linux-gnu compilers: Found library directory: -L/usr/lib/x86_64-linux-gnu compilers: Checking arg -L/usr/lib/../lib compilers: Checking arg -L/usr/lib/gcc/x86_64-linux-gnu/4.7/../../.. compilers: Checking arg /tmp/petsc-U9YCMv/config.compilers/conftest.o compilers: Unknown arg /tmp/petsc-U9YCMv/config.compilers/conftest.o compilers: Checking arg -ldl compilers: Checking arg -lmpi_f77 compilers: Checking arg -lTauMpi-mpi-pdt compilers: Checking arg -rpath compilers: Found -rpath library: /home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib compilers: Checking arg -lmpich compilers: Checking arg -lopa compilers: Checking arg -lmpl compilers: Checking arg -lrt compilers: Checking arg -lpthread compilers: Checking arg -lmpi compilers: Checking arg -lmpi_cxx compilers: Checking arg -lmpi_f90 compilers: Checking arg -lmpi_f77 compilers: Checking arg -rpath compilers: Found -rpath library: /home/hills/seska/packages/openmpi/lib compilers: Checking arg -ltau-mpi-pdt compilers: Checking arg -lbfd compilers: Checking arg -liberty compilers: Checking arg --export-dynamic compilers: Unknown arg --export-dynamic compilers: Checking arg -lrt compilers: Checking arg -rpath compilers: Already in rpathflags, skipping-rpath compilers: Checking arg -lmpich compilers: Checking arg -lopa compilers: Checking arg -lmpl compilers: Checking arg -lrt compilers: Checking arg -lpthread compilers: Checking arg -lmpi compilers: Checking arg -lmpi_cxx compilers: Checking arg -lmpi_f90 compilers: Checking arg -lmpi_f77 compilers: Checking arg -rpath compilers: Already in rpathflags, skipping-rpath compilers: Checking arg -ldl compilers: Checking arg -lm compilers: Checking arg -lstdc++ compilers: Checking arg -lgcc_s compilers: Checking arg -lgcc compilers: Skipping system library: -lgcc compilers: Checking arg --as-needed compilers: Unknown arg --as-needed compilers: Checking arg -lgcc_s compilers: Checking arg --no-as-needed compilers: Unknown arg --no-as-needed compilers: Checking arg -lc compilers: Skipping system library: -lc compilers: Checking arg -lgcc compilers: Skipping system library: -lgcc compilers: Checking arg --as-needed compilers: Unknown arg --as-needed compilers: Checking arg -lgcc_s compilers: Checking arg --no-as-needed compilers: Unknown arg --no-as-needed compilers: Checking arg /usr/lib/gcc/x86_64-linux-gnu/4.7/crtend.o compilers: Unknown arg /usr/lib/gcc/x86_64-linux-gnu/4.7/crtend.o compilers: Checking arg /usr/lib/gcc/x86_64-linux-gnu/4.7/../../../x86_64-linux-gnu/crtn.o compilers: Unknown arg /usr/lib/gcc/x86_64-linux-gnu/4.7/../../../x86_64-linux-gnu/crtn.o compilers: Libraries needed to link C code with another linker: ['-ldl', '-Wl,-rpath,/home/hills/seska/packages/openmpi/lib', '-L/home/hills/seska/packages/openmpi/lib', '-lmpi_f77', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib', '-L/home/hills/seska/packages/tau/x86_64/lib', '-lTauMpi-mpi-pdt', '-Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-lmpich', '-lopa', '-lmpl', '-lrt', '-lpthread', '-lmpi', '-lmpi_cxx', '-lmpi_f90', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib', '-L/home/hills/seska/packages/tau/x86_64/lib', '-ltau-mpi-pdt', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-lbfd', '-liberty', '-Wl,-rpath,/home/hills/seska/packages/openmpi/lib', '-L/home/hills/seska/packages/openmpi/lib', '-Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7', '-L/usr/lib/gcc/x86_64-linux-gnu/4.7', '-lstdc++', '-lgcc_s', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-Wl,-rpath,/home/hills/seska/packages/openmpi/lib', '-L/home/hills/seska/packages/openmpi/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib', '-L/home/hills/seska/packages/tau/x86_64/lib', '-Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib', '-L/home/hills/seska/packages/tau/x86_64/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-Wl,-rpath,/home/hills/seska/packages/openmpi/lib', '-L/home/hills/seska/packages/openmpi/lib', '-Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7', '-L/usr/lib/gcc/x86_64-linux-gnu/4.7', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7', '-L/usr/lib/gcc/x86_64-linux-gnu/4.7', '-Wl,-rpath,/usr/lib/x86_64-linux-gnu', '-L/usr/lib/x86_64-linux-gnu', '-Wl,-rpath,/lib/x86_64-linux-gnu', '-L/lib/x86_64-linux-gnu', '-Wl,-rpath,/usr/lib/x86_64-linux-gnu', '-L/usr/lib/x86_64-linux-gnu', '-Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-Wl,-rpath,/home/hills/seska/packages/openmpi/lib'] compilers: Check that C libraries can be used from Fortran Pushing language FC sh: mpif90 -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -fPIC -Wall -Wno-unused-variable -Wno-unused-dummy-argument -g /tmp/petsc-U9YCMv/config.setCompilers/conftest.F Executing: mpif90 -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -fPIC -Wall -Wno-unused-variable -Wno-unused-dummy-argument -g /tmp/petsc-U9YCMv/config.setCompilers/conftest.F sh: Successful compile: Source: program main end sh: mpif90 -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -fPIC -Wall -Wno-unused-variable -Wno-unused-dummy-argument -g /tmp/petsc-U9YCMv/config.setCompilers/conftest.F Executing: mpif90 -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -fPIC -Wall -Wno-unused-variable -Wno-unused-dummy-argument -g /tmp/petsc-U9YCMv/config.setCompilers/conftest.F sh: Successful compile: Source: program main end Pushing language FC Popping language FC sh: mpif90 -o /tmp/petsc-U9YCMv/config.setCompilers/conftest -fPIC -Wall -Wno-unused-variable -Wno-unused-dummy-argument -g /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: mpif90 -o /tmp/petsc-U9YCMv/config.setCompilers/conftest -fPIC -Wall -Wno-unused-variable -Wno-unused-dummy-argument -g /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: sh: mpif90 -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -fPIC -Wall -Wno-unused-variable -Wno-unused-dummy-argument -g /tmp/petsc-U9YCMv/config.setCompilers/conftest.F Executing: mpif90 -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -fPIC -Wall -Wno-unused-variable -Wno-unused-dummy-argument -g /tmp/petsc-U9YCMv/config.setCompilers/conftest.F sh: Successful compile: Source: program main end Pushing language FC Popping language FC sh: mpif90 -o /tmp/petsc-U9YCMv/config.setCompilers/conftest -fPIC -Wall -Wno-unused-variable -Wno-unused-dummy-argument -g /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: mpif90 -o /tmp/petsc-U9YCMv/config.setCompilers/conftest -fPIC -Wall -Wno-unused-variable -Wno-unused-dummy-argument -g /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Executing: /tmp/petsc-U9YCMv/config.setCompilers/conftest sh: /tmp/petsc-U9YCMv/config.setCompilers/conftest Executing: /tmp/petsc-U9YCMv/config.setCompilers/conftest sh: Popping language FC ================================================================================ TEST checkDependencyGenerationFlag from config.compilers(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/compilers.py:1282) TESTING: checkDependencyGenerationFlag from config.compilers(config/BuildSystem/config/compilers.py:1282) Check if -MMD works for dependency generation, and add it if it does Pushing language C Trying C compiler flag -MMD sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -fPIC -g /tmp/petsc-U9YCMv/config.setCompilers/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -fPIC -g /tmp/petsc-U9YCMv/config.setCompilers/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.setCompilers/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.setCompilers/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.setCompilers/conftest -MMD -fPIC -g /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.setCompilers/conftest -MMD -fPIC -g /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.setCompilers/conftest -fPIC -g /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Possible ERROR while running linker: /usr/bin/ld: /home/hills/seska/packages/tau/x86_64/lib/libtau-mpi-pdt.a(TauCAPI.o): undefined reference to symbol 'ceilf@@GLIBC_2.2.5' /usr/bin/ld: note: 'ceilf@@GLIBC_2.2.5' is defined in DSO /lib/x86_64-linux-gnu/libm.so.6 so try adding it to the linker command line /lib/x86_64-linux-gnu/libm.so.6: could not read symbols: Invalid operation collect2: error: ld returned 1 exit status make: *** [all] Error 1 output: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.setCompilers/conftest -fPIC -g /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt error message = {/usr/bin/ld: /home/hills/seska/packages/tau/x86_64/lib/libtau-mpi-pdt.a(TauCAPI.o): undefined reference to symbol 'ceilf@@GLIBC_2.2.5' /usr/bin/ld: note: 'ceilf@@GLIBC_2.2.5' is defined in DSO /lib/x86_64-linux-gnu/libm.so.6 so try adding it to the linker command line /lib/x86_64-linux-gnu/libm.so.6: could not read symbols: Invalid operation collect2: error: ld returned 1 exit status make: *** [all] Error 1 } Pushing language C Popping language C in tau_cc.sh -o /tmp/petsc-U9YCMv/config.setCompilers/conftest -MMD -fPIC -g /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Valid C linker flag -MMD Testing C compiler flag -MMD sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -fPIC -g -MMD /tmp/petsc-U9YCMv/config.setCompilers/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -fPIC -g -MMD /tmp/petsc-U9YCMv/config.setCompilers/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.setCompilers/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.setCompilers/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Popping language C Pushing language Cxx Trying Cxx compiler flag -MMD sh: mpicxx -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g -fPIC /tmp/petsc-U9YCMv/config.setCompilers/conftest.cc Executing: mpicxx -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g -fPIC /tmp/petsc-U9YCMv/config.setCompilers/conftest.cc sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language CXX Popping language CXX sh: mpicxx -o /tmp/petsc-U9YCMv/config.setCompilers/conftest -MMD -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: mpicxx -o /tmp/petsc-U9YCMv/config.setCompilers/conftest -MMD -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Valid Cxx linker flag -MMD Testing Cxx compiler flag -MMD sh: mpicxx -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g -fPIC -MMD /tmp/petsc-U9YCMv/config.setCompilers/conftest.cc Executing: mpicxx -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g -fPIC -MMD /tmp/petsc-U9YCMv/config.setCompilers/conftest.cc sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Popping language Cxx Pushing language FC Trying FC compiler flag -MMD sh: mpif90 -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -fPIC -Wall -Wno-unused-variable -Wno-unused-dummy-argument -g /tmp/petsc-U9YCMv/config.setCompilers/conftest.F Executing: mpif90 -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -fPIC -Wall -Wno-unused-variable -Wno-unused-dummy-argument -g /tmp/petsc-U9YCMv/config.setCompilers/conftest.F sh: Successful compile: Source: program main end Pushing language FC Popping language FC sh: mpif90 -o /tmp/petsc-U9YCMv/config.setCompilers/conftest -MMD -fPIC -Wall -Wno-unused-variable -Wno-unused-dummy-argument -g /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: mpif90 -o /tmp/petsc-U9YCMv/config.setCompilers/conftest -MMD -fPIC -Wall -Wno-unused-variable -Wno-unused-dummy-argument -g /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Valid FC linker flag -MMD Testing FC compiler flag -MMD sh: mpif90 -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -fPIC -Wall -Wno-unused-variable -Wno-unused-dummy-argument -g -MMD /tmp/petsc-U9YCMv/config.setCompilers/conftest.F Executing: mpif90 -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -fPIC -Wall -Wno-unused-variable -Wno-unused-dummy-argument -g -MMD /tmp/petsc-U9YCMv/config.setCompilers/conftest.F sh: Successful compile: Source: program main end Popping language FC sh: mpicxx --help Executing: mpicxx --help sh: Usage: g++ [options] file... Options: -pass-exit-codes Exit with highest error code from a phase --help Display this information --target-help Display target specific command line options --help={common|optimizers|params|target|warnings|[^]{joined|separate|undocumented}}[,...] Display specific types of command line options (Use '-v --help' to display command line options of sub-processes) --version Display compiler version information -dumpspecs Display all of the built in spec strings -dumpversion Display the version of the compiler -dumpmachine Display the compiler's target processor -print-search-dirs Display the directories in the compiler's search path -print-libgcc-file-name Display the name of the compiler's companion library -print-file-name= Display the full path to library -print-prog-name= Display the full path to compiler component -print-multiarch Display the target's normalized GNU triplet, used as a component in the library path -print-multi-directory Display the root directory for versions of libgcc -print-multi-lib Display the mapping between command line options and multiple library search directories -print-multi-os-directory Display the relative path to OS libraries -print-sysroot Display the target libraries directory -print-sysroot-headers-suffix Display the sysroot suffix used to find headers -Wa, Pass comma-separated on to the assembler -Wp, Pass comma-separated on to the preprocessor -Wl, Pass comma-separated on to the linker -Xassembler Pass on to the assembler -Xpreprocessor Pass on to the preprocessor -Xlinker Pass on to the linker -save-temps Do not delete intermediate files -save-temps= Do not delete intermediate files -no-canonical-prefixes Do not canonicalize paths when building relative prefixes to other gcc components -pipe Use pipes rather than intermediate files -time Time the execution of each subprocess -specs= Override built-in specs with the contents of -std= Assume that the input sources are for --sysroot= Use as the root directory for headers and libraries -B Add to the compiler's search paths -v Display the programs invoked by the compiler -### Like -v but options quoted and commands not executed -E Preprocess only; do not compile, assemble or link -S Compile only; do not assemble or link -c Compile and assemble, but do not link -o Place the output into -pie Create a position independent executable -shared Create a shared library -x Specify the language of the following input files Permissible languages include: c c++ assembler none 'none' means revert to the default behavior of guessing the language based on the file's extension Options starting with -g, -f, -m, -O, -W, or --param are automatically passed on to the various sub-processes invoked by g++. In order to pass other options on to these processes the -W options must be used. For bug reporting instructions, please see: . ================================================================================ TEST checkRestrict from config.compilers(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/compilers.py:134) TESTING: checkRestrict from config.compilers(config/BuildSystem/config/compilers.py:134) Check for the C/CXX restrict keyword Pushing language Cxx sh: mpicxx -c -o /tmp/petsc-U9YCMv/config.compilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g -fPIC /tmp/petsc-U9YCMv/config.compilers/conftest.cc Executing: mpicxx -c -o /tmp/petsc-U9YCMv/config.compilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g -fPIC /tmp/petsc-U9YCMv/config.compilers/conftest.cc sh: Possible ERROR while running compiler: ret = 256 error message = {/tmp/petsc-U9YCMv/config.compilers/conftest.cc: In function ‘int main()’: /tmp/petsc-U9YCMv/config.compilers/conftest.cc:5:18: error: expected initializer before ‘x’ } Source: #include "confdefs.h" #include "conffix.h" int main() { float * restrict x;; return 0; } sh: mpicxx -c -o /tmp/petsc-U9YCMv/config.compilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g -fPIC /tmp/petsc-U9YCMv/config.compilers/conftest.cc Executing: mpicxx -c -o /tmp/petsc-U9YCMv/config.compilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g -fPIC /tmp/petsc-U9YCMv/config.compilers/conftest.cc sh: Possible ERROR while running compiler: error message = {/tmp/petsc-U9YCMv/config.compilers/conftest.cc: In function ‘int main()’: /tmp/petsc-U9YCMv/config.compilers/conftest.cc:5:23: warning: unused variable ‘x’ [-Wunused-variable] } Source: #include "confdefs.h" #include "conffix.h" int main() { float * __restrict__ x;; return 0; } compilers: Set Cxx restrict keyword to __restrict__ Defined "CXX_RESTRICT" to " __restrict__" Popping language Cxx ================================================================================ TEST checkCxxNamespace from config.compilers(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/compilers.py:355) TESTING: checkCxxNamespace from config.compilers(config/BuildSystem/config/compilers.py:355) Checks that C++ compiler supports namespaces, and if it does defines HAVE_CXX_NAMESPACE Pushing language Cxx sh: mpicxx -c -o /tmp/petsc-U9YCMv/config.compilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g -fPIC /tmp/petsc-U9YCMv/config.compilers/conftest.cc Executing: mpicxx -c -o /tmp/petsc-U9YCMv/config.compilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g -fPIC /tmp/petsc-U9YCMv/config.compilers/conftest.cc sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" namespace petsc {int dummy;} int main() { ; return 0; } sh: mpicxx -c -o /tmp/petsc-U9YCMv/config.compilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g -fPIC /tmp/petsc-U9YCMv/config.compilers/conftest.cc Executing: mpicxx -c -o /tmp/petsc-U9YCMv/config.compilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g -fPIC /tmp/petsc-U9YCMv/config.compilers/conftest.cc sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" template struct a {}; namespace trouble{ template struct a : public ::a {}; } trouble::a uugh; int main() { ; return 0; } Popping language Cxx compilers: C++ has namespaces Defined "HAVE_CXX_NAMESPACE" to "1" ================================================================================ TEST checkCxxOptionalExtensions from config.compilers(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/compilers.py:330) TESTING: checkCxxOptionalExtensions from config.compilers(config/BuildSystem/config/compilers.py:330) Check whether the C++ compiler (IBM xlC, OSF5) need special flag for .c files which contain C++ Pushing language Cxx sh: mpicxx -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g -fPIC /tmp/petsc-U9YCMv/config.setCompilers/conftest.c Executing: mpicxx -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g -fPIC /tmp/petsc-U9YCMv/config.setCompilers/conftest.c sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { class somename { int i; };; return 0; } Added Cxx compiler flag Popping language Cxx ================================================================================ TEST checkCxxStaticInline from config.compilers(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/compilers.py:119) TESTING: checkCxxStaticInline from config.compilers(config/BuildSystem/config/compilers.py:119) Check for C++ keyword: static inline Pushing language Cxx sh: mpicxx -c -o /tmp/petsc-U9YCMv/config.compilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g -fPIC /tmp/petsc-U9YCMv/config.compilers/conftest.cc Executing: mpicxx -c -o /tmp/petsc-U9YCMv/config.compilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g -fPIC /tmp/petsc-U9YCMv/config.compilers/conftest.cc sh: Possible ERROR while running compiler: error message = {/tmp/petsc-U9YCMv/config.compilers/conftest.cc: In function ‘int main()’: /tmp/petsc-U9YCMv/config.compilers/conftest.cc:6:5: warning: unused variable ‘i’ [-Wunused-variable] } Source: #include "confdefs.h" #include "conffix.h" static inline int foo(int a) {return a;} int main() { int i = foo(1);; return 0; } compilers: Set Cxx StaticInline keyword to static inline Popping language Cxx Defined "CXX_STATIC_INLINE" to "static inline" ================================================================================ TEST checkCxxLibraries from config.compilers(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/compilers.py:370) TESTING: checkCxxLibraries from config.compilers(config/BuildSystem/config/compilers.py:370) Determines the libraries needed to link with C++ Pushing language Cxx sh: mpicxx -c -o /tmp/petsc-U9YCMv/config.compilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g -fPIC /tmp/petsc-U9YCMv/config.compilers/conftest.cc Executing: mpicxx -c -o /tmp/petsc-U9YCMv/config.compilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g -fPIC /tmp/petsc-U9YCMv/config.compilers/conftest.cc sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language CXX Popping language CXX sh: mpicxx -o /tmp/petsc-U9YCMv/config.compilers/conftest -v -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g /tmp/petsc-U9YCMv/config.compilers/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: mpicxx -o /tmp/petsc-U9YCMv/config.compilers/conftest -v -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g /tmp/petsc-U9YCMv/config.compilers/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: mpicxx for MPICH version 3.0.4 Possible ERROR while running linker: Using built-in specs. COLLECT_GCC=g++ COLLECT_LTO_WRAPPER=/usr/lib/gcc/x86_64-linux-gnu/4.7/lto-wrapper Target: x86_64-linux-gnu Configured with: ../src/configure -v --with-pkgversion='Ubuntu/Linaro 4.7.3-1ubuntu1' --with-bugurl=file:///usr/share/doc/gcc-4.7/README.Bugs --enable-languages=c,c++,go,fortran,objc,obj-c++ --prefix=/usr --program-suffix=-4.7 --enable-shared --enable-linker-build-id --libexecdir=/usr/lib --without-included-gettext --enable-threads=posix --with-gxx-include-dir=/usr/include/c++/4.7 --libdir=/usr/lib --enable-nls --with-sysroot=/ --enable-clocale=gnu --enable-libstdcxx-debug --enable-libstdcxx-time=yes --enable-gnu-unique-object --enable-plugin --with-system-zlib --enable-objc-gc --with-cloog --enable-cloog-backend=ppl --disable-cloog-version-check --disable-ppl-version-check --enable-multiarch --disable-werror --with-arch-32=i686 --with-abi=m64 --with-multilib-list=m32,m64,mx32 --with-tune=generic --enable-checking=release --build=x86_64-linux-gnu --host=x86_64-linux-gnu --target=x86_64-linux-gnu Thread model: posix gcc version 4.7.3 (Ubuntu/Linaro 4.7.3-1ubuntu1) COMPILER_PATH=/usr/lib/gcc/x86_64-linux-gnu/4.7/:/usr/lib/gcc/x86_64-linux-gnu/4.7/:/usr/lib/gcc/x86_64-linux-gnu/:/usr/lib/gcc/x86_64-linux-gnu/4.7/:/usr/lib/gcc/x86_64-linux-gnu/ LIBRARY_PATH=/usr/lib/gcc/x86_64-linux-gnu/4.7/:/usr/lib/gcc/x86_64-linux-gnu/4.7/../../../x86_64-linux-gnu/:/usr/lib/gcc/x86_64-linux-gnu/4.7/../../../../lib/:/lib/x86_64-linux-gnu/:/lib/../lib/:/usr/lib/x86_64-linux-gnu/:/usr/lib/../lib/:/usr/lib/gcc/x86_64-linux-gnu/4.7/../../../:/lib/:/usr/lib/ COLLECT_GCC_OPTIONS='-g' '-fPIC' '-o' '/tmp/petsc-U9YCMv/config.compilers/conftest' '-v' '-Wall' '-Wwrite-strings' '-Wno-strict-aliasing' '-Wno-unknown-pragmas' '-g' '-L/home/hills/seska/packages/openmpi/lib' '-L/home/hills/seska/packages/tau/x86_64/lib' '-L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib' '-L/home/hills/seska/packages/tau/x86_64/lib' '-L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib' '-L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64' '-L/home/hills/seska/packages/openmpi/lib' '-L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib' '-L/usr/lib/gcc/x86_64-linux-gnu/4.7' '-L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt' '-L/home/hills/seska/packages/openmpi/lib' '-L/home/hills/seska/packages/tau/x86_64/lib' '-L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib' '-L/home/hills/seska/packages/tau/x86_64/lib' '-L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib' '-L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64' '-L/home/hills/seska/packages/openmpi/lib' '-L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib' '-L/usr/lib/gcc/x86_64-linux-gnu/4.7' '-L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt' '-L/usr/lib/gcc/x86_64-linux-gnu/4.7' '-L/usr/lib/x86_64-linux-gnu' '-L/lib/x86_64-linux-gnu' '-L/usr/lib/x86_64-linux-gnu' '-I' '/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include' '-L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib' '-shared-libgcc' '-mtune=generic' '-march=x86-64' /usr/lib/gcc/x86_64-linux-gnu/4.7/collect2 --sysroot=/ --build-id --eh-frame-hdr -m elf_x86_64 --hash-style=gnu --as-needed -dynamic-linker /lib64/ld-linux-x86-64.so.2 -z relro -o /tmp/petsc-U9YCMv/config.compilers/conftest /usr/lib/gcc/x86_64-linux-gnu/4.7/../../../x86_64-linux-gnu/crt1.o /usr/lib/gcc/x86_64-linux-gnu/4.7/../../../x86_64-linux-gnu/crti.o /usr/lib/gcc/x86_64-linux-gnu/4.7/crtbegin.o -L/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/4.7/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/4.7/../../.. /tmp/petsc-U9YCMv/config.compilers/conftest.o -ldl -rpath /home/hills/seska/packages/openmpi/lib -lmpi_f77 -rpath /home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -rpath /home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -rpath /home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -rpath /home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -rpath /home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -rpath /home/hills/seska/packages/openmpi/lib -rpath /home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -rpath /usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -rpath /home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -rpath /home/hills/seska/packages/openmpi/lib -rpath /home/hills/seska/packages/tau/x86_64/lib -rpath /home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -rpath /home/hills/seska/packages/tau/x86_64/lib -rpath /home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -rpath /home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -rpath /home/hills/seska/packages/openmpi/lib -rpath /home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -rpath /usr/lib/gcc/x86_64-linux-gnu/4.7 -rpath /home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -rpath /usr/lib/gcc/x86_64-linux-gnu/4.7 -rpath /usr/lib/x86_64-linux-gnu -rpath /lib/x86_64-linux-gnu -rpath /usr/lib/x86_64-linux-gnu -rpath /home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -rpath /home/hills/seska/packages/openmpi/lib -ldl -lmpichcxx -rpath /home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lstdc++ -lm -lgcc_s -lgcc -lc -lgcc_s -lgcc /usr/lib/gcc/x86_64-linux-gnu/4.7/crtend.o /usr/lib/gcc/x86_64-linux-gnu/4.7/../../../x86_64-linux-gnu/crtn.o output: mpicxx for MPICH version 3.0.4 error message = {Using built-in specs. COLLECT_GCC=g++ COLLECT_LTO_WRAPPER=/usr/lib/gcc/x86_64-linux-gnu/4.7/lto-wrapper Target: x86_64-linux-gnu Configured with: ../src/configure -v --with-pkgversion='Ubuntu/Linaro 4.7.3-1ubuntu1' --with-bugurl=file:///usr/share/doc/gcc-4.7/README.Bugs --enable-languages=c,c++,go,fortran,objc,obj-c++ --prefix=/usr --program-suffix=-4.7 --enable-shared --enable-linker-build-id --libexecdir=/usr/lib --without-included-gettext --enable-threads=posix --with-gxx-include-dir=/usr/include/c++/4.7 --libdir=/usr/lib --enable-nls --with-sysroot=/ --enable-clocale=gnu --enable-libstdcxx-debug --enable-libstdcxx-time=yes --enable-gnu-unique-object --enable-plugin --with-system-zlib --enable-objc-gc --with-cloog --enable-cloog-backend=ppl --disable-cloog-version-check --disable-ppl-version-check --enable-multiarch --disable-werror --with-arch-32=i686 --with-abi=m64 --with-multilib-list=m32,m64,mx32 --with-tune=generic --enable-checking=release --build=x86_64-linux-gnu --host=x86_64-linux-gnu --target=x86_64-linux-gnu Thread model: posix gcc version 4.7.3 (Ubuntu/Linaro 4.7.3-1ubuntu1) COMPILER_PATH=/usr/lib/gcc/x86_64-linux-gnu/4.7/:/usr/lib/gcc/x86_64-linux-gnu/4.7/:/usr/lib/gcc/x86_64-linux-gnu/:/usr/lib/gcc/x86_64-linux-gnu/4.7/:/usr/lib/gcc/x86_64-linux-gnu/ LIBRARY_PATH=/usr/lib/gcc/x86_64-linux-gnu/4.7/:/usr/lib/gcc/x86_64-linux-gnu/4.7/../../../x86_64-linux-gnu/:/usr/lib/gcc/x86_64-linux-gnu/4.7/../../../../lib/:/lib/x86_64-linux-gnu/:/lib/../lib/:/usr/lib/x86_64-linux-gnu/:/usr/lib/../lib/:/usr/lib/gcc/x86_64-linux-gnu/4.7/../../../:/lib/:/usr/lib/ COLLECT_GCC_OPTIONS='-g' '-fPIC' '-o' '/tmp/petsc-U9YCMv/config.compilers/conftest' '-v' '-Wall' '-Wwrite-strings' '-Wno-strict-aliasing' '-Wno-unknown-pragmas' '-g' '-L/home/hills/seska/packages/openmpi/lib' '-L/home/hills/seska/packages/tau/x86_64/lib' '-L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib' '-L/home/hills/seska/packages/tau/x86_64/lib' '-L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib' '-L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64' '-L/home/hills/seska/packages/openmpi/lib' '-L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib' '-L/usr/lib/gcc/x86_64-linux-gnu/4.7' '-L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt' '-L/home/hills/seska/packages/openmpi/lib' '-L/home/hills/seska/packages/tau/x86_64/lib' '-L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib' '-L/home/hills/seska/packages/tau/x86_64/lib' '-L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib' '-L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64' '-L/home/hills/seska/packages/openmpi/lib' '-L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib' '-L/usr/lib/gcc/x86_64-linux-gnu/4.7' '-L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt' '-L/usr/lib/gcc/x86_64-linux-gnu/4.7' '-L/usr/lib/x86_64-linux-gnu' '-L/lib/x86_64-linux-gnu' '-L/usr/lib/x86_64-linux-gnu' '-I' '/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include' '-L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib' '-shared-libgcc' '-mtune=generic' '-march=x86-64' /usr/lib/gcc/x86_64-linux-gnu/4.7/collect2 --sysroot=/ --build-id --eh-frame-hdr -m elf_x86_64 --hash-style=gnu --as-needed -dynamic-linker /lib64/ld-linux-x86-64.so.2 -z relro -o /tmp/petsc-U9YCMv/config.compilers/conftest /usr/lib/gcc/x86_64-linux-gnu/4.7/../../../x86_64-linux-gnu/crt1.o /usr/lib/gcc/x86_64-linux-gnu/4.7/../../../x86_64-linux-gnu/crti.o /usr/lib/gcc/x86_64-linux-gnu/4.7/crtbegin.o -L/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/4.7/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/4.7/../../.. /tmp/petsc-U9YCMv/config.compilers/conftest.o -ldl -rpath /home/hills/seska/packages/openmpi/lib -lmpi_f77 -rpath /home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -rpath /home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -rpath /home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -rpath /home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -rpath /home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -rpath /home/hills/seska/packages/openmpi/lib -rpath /home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -rpath /usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -rpath /home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -rpath /home/hills/seska/packages/openmpi/lib -rpath /home/hills/seska/packages/tau/x86_64/lib -rpath /home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -rpath /home/hills/seska/packages/tau/x86_64/lib -rpath /home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -rpath /home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -rpath /home/hills/seska/packages/openmpi/lib -rpath /home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -rpath /usr/lib/gcc/x86_64-linux-gnu/4.7 -rpath /home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -rpath /usr/lib/gcc/x86_64-linux-gnu/4.7 -rpath /usr/lib/x86_64-linux-gnu -rpath /lib/x86_64-linux-gnu -rpath /usr/lib/x86_64-linux-gnu -rpath /home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -rpath /home/hills/seska/packages/openmpi/lib -ldl -lmpichcxx -rpath /home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lstdc++ -lm -lgcc_s -lgcc -lc -lgcc_s -lgcc /usr/lib/gcc/x86_64-linux-gnu/4.7/crtend.o /usr/lib/gcc/x86_64-linux-gnu/4.7/../../../x86_64-linux-gnu/crtn.o } Pushing language CXX Popping language CXX in mpicxx -o /tmp/petsc-U9YCMv/config.compilers/conftest -v -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g /tmp/petsc-U9YCMv/config.compilers/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Popping language Cxx compilers: Checking arg mpicxx compilers: Unknown arg mpicxx compilers: Checking arg for compilers: Unknown arg for compilers: Checking arg MPICH compilers: Unknown arg MPICH compilers: Checking arg version compilers: Unknown arg version compilers: Checking arg 3.0.4 compilers: Unknown arg 3.0.4 compilers: Checking arg Using compilers: Unknown arg Using compilers: Checking arg built-in compilers: Unknown arg built-in compilers: Checking arg specs. compilers: Unknown arg specs. compilers: Checking arg COLLECT_GCC=g++ compilers: Unknown arg COLLECT_GCC=g++ compilers: Checking arg COLLECT_LTO_WRAPPER=/usr/lib/gcc/x86_64-linux-gnu/4.7/lto-wrapper compilers: Unknown arg COLLECT_LTO_WRAPPER=/usr/lib/gcc/x86_64-linux-gnu/4.7/lto-wrapper compilers: Checking arg Target: compilers: Unknown arg Target: compilers: Checking arg x86_64-linux-gnu compilers: Unknown arg x86_64-linux-gnu compilers: Checking arg Configured compilers: Unknown arg Configured compilers: Checking arg with: compilers: Unknown arg with: compilers: Checking arg ../src/configure compilers: Unknown arg ../src/configure compilers: Checking arg -v compilers: Unknown arg -v compilers: Checking arg --with-pkgversion= compilers: Unknown arg --with-pkgversion= compilers: Checking arg --with-bugurl=file:///usr/share/doc/gcc-4.7/README.Bugs compilers: Unknown arg --with-bugurl=file:///usr/share/doc/gcc-4.7/README.Bugs compilers: Checking arg --enable-languages=c,c++,go,fortran,objc,obj-c++ compilers: Unknown arg --enable-languages=c,c++,go,fortran,objc,obj-c++ compilers: Checking arg --prefix=/usr compilers: Unknown arg --prefix=/usr compilers: Checking arg --program-suffix=-4.7 compilers: Unknown arg --program-suffix=-4.7 compilers: Checking arg --enable-shared compilers: Unknown arg --enable-shared compilers: Checking arg --enable-linker-build-id compilers: Unknown arg --enable-linker-build-id compilers: Checking arg --libexecdir=/usr/lib compilers: Unknown arg --libexecdir=/usr/lib compilers: Checking arg --without-included-gettext compilers: Unknown arg --without-included-gettext compilers: Checking arg --enable-threads=posix compilers: Unknown arg --enable-threads=posix compilers: Checking arg --with-gxx-include-dir=/usr/include/c++/4.7 compilers: Unknown arg --with-gxx-include-dir=/usr/include/c++/4.7 compilers: Checking arg --libdir=/usr/lib compilers: Unknown arg --libdir=/usr/lib compilers: Checking arg --enable-nls compilers: Unknown arg --enable-nls compilers: Checking arg --with-sysroot=/ compilers: Unknown arg --with-sysroot=/ compilers: Checking arg --enable-clocale=gnu compilers: Unknown arg --enable-clocale=gnu compilers: Checking arg --enable-libstdcxx-debug compilers: Unknown arg --enable-libstdcxx-debug compilers: Checking arg --enable-libstdcxx-time=yes compilers: Unknown arg --enable-libstdcxx-time=yes compilers: Checking arg --enable-gnu-unique-object compilers: Unknown arg --enable-gnu-unique-object compilers: Checking arg --enable-plugin compilers: Unknown arg --enable-plugin compilers: Checking arg --with-system-zlib compilers: Unknown arg --with-system-zlib compilers: Checking arg --enable-objc-gc compilers: Unknown arg --enable-objc-gc compilers: Checking arg --with-cloog compilers: Unknown arg --with-cloog compilers: Checking arg --enable-cloog-backend=ppl compilers: Unknown arg --enable-cloog-backend=ppl compilers: Checking arg --disable-cloog-version-check compilers: Unknown arg --disable-cloog-version-check compilers: Checking arg --disable-ppl-version-check compilers: Unknown arg --disable-ppl-version-check compilers: Checking arg --enable-multiarch compilers: Unknown arg --enable-multiarch compilers: Checking arg --disable-werror compilers: Unknown arg --disable-werror compilers: Checking arg --with-arch-32=i686 compilers: Unknown arg --with-arch-32=i686 compilers: Checking arg --with-abi=m64 compilers: Unknown arg --with-abi=m64 compilers: Checking arg --with-multilib-list=m32,m64,mx32 compilers: Unknown arg --with-multilib-list=m32,m64,mx32 compilers: Checking arg --with-tune=generic compilers: Unknown arg --with-tune=generic compilers: Checking arg --enable-checking=release compilers: Unknown arg --enable-checking=release compilers: Checking arg --build=x86_64-linux-gnu compilers: Unknown arg --build=x86_64-linux-gnu compilers: Checking arg --host=x86_64-linux-gnu compilers: Unknown arg --host=x86_64-linux-gnu compilers: Checking arg --target=x86_64-linux-gnu compilers: Unknown arg --target=x86_64-linux-gnu compilers: Checking arg Thread compilers: Unknown arg Thread compilers: Checking arg model: compilers: Unknown arg model: compilers: Checking arg posix compilers: Unknown arg posix compilers: Checking arg gcc compilers: Unknown arg gcc compilers: Checking arg version compilers: Unknown arg version compilers: Checking arg 4.7.3 compilers: Unknown arg 4.7.3 compilers: Checking arg (Ubuntu/Linaro compilers: Unknown arg (Ubuntu/Linaro compilers: Checking arg 4.7.3-1ubuntu1) compilers: Unknown arg 4.7.3-1ubuntu1) compilers: Checking arg COMPILER_PATH=/usr/lib/gcc/x86_64-linux-gnu/4.7/:/usr/lib/gcc/x86_64-linux-gnu/4.7/:/usr/lib/gcc/x86_64-linux-gnu/:/usr/lib/gcc/x86_64-linux-gnu/4.7/:/usr/lib/gcc/x86_64-linux-gnu/ compilers: Unknown arg COMPILER_PATH=/usr/lib/gcc/x86_64-linux-gnu/4.7/:/usr/lib/gcc/x86_64-linux-gnu/4.7/:/usr/lib/gcc/x86_64-linux-gnu/:/usr/lib/gcc/x86_64-linux-gnu/4.7/:/usr/lib/gcc/x86_64-linux-gnu/ compilers: Checking arg LIBRARY_PATH=/usr/lib/gcc/x86_64-linux-gnu/4.7/:/usr/lib/gcc/x86_64-linux-gnu/4.7/../../../x86_64-linux-gnu/:/usr/lib/gcc/x86_64-linux-gnu/4.7/../../../../lib/:/lib/x86_64-linux-gnu/:/lib/../lib/:/usr/lib/x86_64-linux-gnu/:/usr/lib/../lib/:/usr/lib/gcc/x86_64-linux-gnu/4.7/../../../:/lib/:/usr/lib/ compilers: Unknown arg LIBRARY_PATH=/usr/lib/gcc/x86_64-linux-gnu/4.7/:/usr/lib/gcc/x86_64-linux-gnu/4.7/../../../x86_64-linux-gnu/:/usr/lib/gcc/x86_64-linux-gnu/4.7/../../../../lib/:/lib/x86_64-linux-gnu/:/lib/../lib/:/usr/lib/x86_64-linux-gnu/:/usr/lib/../lib/:/usr/lib/gcc/x86_64-linux-gnu/4.7/../../../:/lib/:/usr/lib/ compilers: Checking arg COLLECT_GCC_OPTIONS= compilers: Unknown arg COLLECT_GCC_OPTIONS= compilers: Checking arg /usr/lib/gcc/x86_64-linux-gnu/4.7/collect2 compilers: Unknown arg /usr/lib/gcc/x86_64-linux-gnu/4.7/collect2 compilers: Checking arg --sysroot=/ compilers: Unknown arg --sysroot=/ compilers: Checking arg --build-id compilers: Unknown arg --build-id compilers: Checking arg --eh-frame-hdr compilers: Unknown arg --eh-frame-hdr compilers: Checking arg -m compilers: Unknown arg -m compilers: Checking arg elf_x86_64 compilers: Unknown arg elf_x86_64 compilers: Checking arg --hash-style=gnu compilers: Unknown arg --hash-style=gnu compilers: Checking arg --as-needed compilers: Unknown arg --as-needed compilers: Checking arg -dynamic-linker compilers: Unknown arg -dynamic-linker compilers: Checking arg /lib64/ld-linux-x86-64.so.2 compilers: Unknown arg /lib64/ld-linux-x86-64.so.2 compilers: Checking arg -z compilers: Unknown arg -z compilers: Checking arg relro compilers: Unknown arg relro compilers: Checking arg -o compilers: Unknown arg -o compilers: Checking arg /tmp/petsc-U9YCMv/config.compilers/conftest compilers: Unknown arg /tmp/petsc-U9YCMv/config.compilers/conftest compilers: Checking arg /usr/lib/gcc/x86_64-linux-gnu/4.7/../../../x86_64-linux-gnu/crt1.o compilers: Unknown arg /usr/lib/gcc/x86_64-linux-gnu/4.7/../../../x86_64-linux-gnu/crt1.o compilers: Checking arg /usr/lib/gcc/x86_64-linux-gnu/4.7/../../../x86_64-linux-gnu/crti.o compilers: Unknown arg /usr/lib/gcc/x86_64-linux-gnu/4.7/../../../x86_64-linux-gnu/crti.o compilers: Checking arg /usr/lib/gcc/x86_64-linux-gnu/4.7/crtbegin.o compilers: Unknown arg /usr/lib/gcc/x86_64-linux-gnu/4.7/crtbegin.o compilers: Checking arg -L/home/hills/seska/packages/openmpi/lib compilers: Found library directory: -L/home/hills/seska/packages/openmpi/lib compilers: Checking arg -L/home/hills/seska/packages/tau/x86_64/lib compilers: Found library directory: -L/home/hills/seska/packages/tau/x86_64/lib compilers: Checking arg -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib compilers: Found library directory: -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib compilers: Checking arg -L/home/hills/seska/packages/tau/x86_64/lib compilers: Checking arg -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib compilers: Found library directory: -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib compilers: Checking arg -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 compilers: Found library directory: -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 compilers: Checking arg -L/home/hills/seska/packages/openmpi/lib compilers: Checking arg -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib compilers: Checking arg -L/usr/lib/gcc/x86_64-linux-gnu/4.7 compilers: Found library directory: -L/usr/lib/gcc/x86_64-linux-gnu/4.7 compilers: Checking arg -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt compilers: Found library directory: -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt compilers: Checking arg -L/home/hills/seska/packages/openmpi/lib compilers: Checking arg -L/home/hills/seska/packages/tau/x86_64/lib compilers: Checking arg -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib compilers: Checking arg -L/home/hills/seska/packages/tau/x86_64/lib compilers: Checking arg -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib compilers: Checking arg -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 compilers: Checking arg -L/home/hills/seska/packages/openmpi/lib compilers: Checking arg -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib compilers: Checking arg -L/usr/lib/gcc/x86_64-linux-gnu/4.7 compilers: Checking arg -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt compilers: Checking arg -L/usr/lib/gcc/x86_64-linux-gnu/4.7 compilers: Checking arg -L/usr/lib/x86_64-linux-gnu compilers: Found library directory: -L/usr/lib/x86_64-linux-gnu compilers: Checking arg -L/lib/x86_64-linux-gnu compilers: Found library directory: -L/lib/x86_64-linux-gnu compilers: Checking arg -L/usr/lib/x86_64-linux-gnu compilers: Checking arg -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib compilers: Checking arg -L/usr/lib/gcc/x86_64-linux-gnu/4.7 compilers: Checking arg -L/usr/lib/gcc/x86_64-linux-gnu/4.7/../../../x86_64-linux-gnu compilers: Checking arg -L/usr/lib/gcc/x86_64-linux-gnu/4.7/../../../../lib compilers: Checking arg -L/lib/x86_64-linux-gnu compilers: Checking arg -L/lib/../lib compilers: Checking arg -L/usr/lib/x86_64-linux-gnu compilers: Checking arg -L/usr/lib/../lib compilers: Checking arg -L/usr/lib/gcc/x86_64-linux-gnu/4.7/../../.. compilers: Checking arg /tmp/petsc-U9YCMv/config.compilers/conftest.o compilers: Unknown arg /tmp/petsc-U9YCMv/config.compilers/conftest.o compilers: Checking arg -ldl compilers: Found library: -ldl Library already in C list so skipping in C++ compilers: Checking arg -rpath compilers: Found -rpath library: /home/hills/seska/packages/openmpi/lib compilers: Checking arg -lmpi_f77 compilers: Found library: -lmpi_f77 Library already in C list so skipping in C++ compilers: Checking arg -rpath compilers: Found -rpath library: /home/hills/seska/packages/tau/x86_64/lib compilers: Checking arg -lTauMpi-mpi-pdt compilers: Found library: -lTauMpi-mpi-pdt Library already in C list so skipping in C++ compilers: Checking arg -rpath compilers: Found -rpath library: /home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib compilers: Checking arg -lmpich compilers: Found library: -lmpich Library already in C list so skipping in C++ compilers: Checking arg -lopa compilers: Found library: -lopa Library already in C list so skipping in C++ compilers: Checking arg -lmpl compilers: Found library: -lmpl Library already in C list so skipping in C++ compilers: Checking arg -lrt compilers: Found library: -lrt Library already in C list so skipping in C++ compilers: Checking arg -lpthread compilers: Found library: -lpthread Library already in C list so skipping in C++ compilers: Checking arg -lmpi compilers: Found library: -lmpi Library already in C list so skipping in C++ compilers: Checking arg -lmpi_cxx compilers: Found library: -lmpi_cxx Library already in C list so skipping in C++ compilers: Checking arg -lmpi_f90 compilers: Found library: -lmpi_f90 Library already in C list so skipping in C++ compilers: Checking arg -rpath compilers: Already in rpathflags, skipping:-rpath compilers: Checking arg -ltau-mpi-pdt compilers: Found library: -ltau-mpi-pdt Library already in C list so skipping in C++ compilers: Checking arg -rpath compilers: Found -rpath library: /home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib compilers: Checking arg -rpath compilers: Found -rpath library: /home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 compilers: Checking arg -lbfd compilers: Found library: -lbfd Library already in C list so skipping in C++ compilers: Checking arg -liberty compilers: Found library: -liberty Library already in C list so skipping in C++ compilers: Checking arg -rpath compilers: Already in rpathflags, skipping:-rpath compilers: Checking arg -rpath compilers: Already in rpathflags, skipping:-rpath compilers: Checking arg -rpath compilers: Found -rpath library: /usr/lib/gcc/x86_64-linux-gnu/4.7 compilers: Checking arg -lstdc++ compilers: Found library: -lstdc++ Library already in C list so skipping in C++ compilers: Checking arg -lgcc_s compilers: Found library: -lgcc_s Library already in C list so skipping in C++ compilers: Checking arg -rpath compilers: Found -rpath library: /home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt compilers: Checking arg -rpath compilers: Already in rpathflags, skipping:-rpath compilers: Checking arg -rpath compilers: Already in rpathflags, skipping:-rpath compilers: Checking arg -rpath compilers: Already in rpathflags, skipping:-rpath compilers: Checking arg -rpath compilers: Already in rpathflags, skipping:-rpath compilers: Checking arg -rpath compilers: Already in rpathflags, skipping:-rpath compilers: Checking arg -rpath compilers: Already in rpathflags, skipping:-rpath compilers: Checking arg -rpath compilers: Already in rpathflags, skipping:-rpath compilers: Checking arg -rpath compilers: Already in rpathflags, skipping:-rpath compilers: Checking arg -rpath compilers: Already in rpathflags, skipping:-rpath compilers: Checking arg -rpath compilers: Already in rpathflags, skipping:-rpath compilers: Checking arg -rpath compilers: Already in rpathflags, skipping:-rpath compilers: Checking arg -rpath compilers: Found -rpath library: /usr/lib/x86_64-linux-gnu compilers: Checking arg -rpath compilers: Found -rpath library: /lib/x86_64-linux-gnu compilers: Checking arg -rpath compilers: Already in rpathflags, skipping:-rpath compilers: Checking arg -rpath compilers: Already in rpathflags, skipping:-rpath compilers: Checking arg -rpath compilers: Already in rpathflags, skipping:-rpath compilers: Checking arg -ldl compilers: Checking arg -lmpichcxx compilers: Found library: -lmpichcxx compilers: Checking arg -rpath compilers: Already in rpathflags, skipping:-rpath compilers: Checking arg -lmpich compilers: Checking arg -lopa compilers: Checking arg -lmpl compilers: Checking arg -lrt compilers: Checking arg -lpthread compilers: Checking arg -lstdc++ compilers: Checking arg -lm compilers: Checking arg -lgcc_s compilers: Checking arg -lgcc compilers: Skipping system library: -lgcc compilers: Checking arg -lc compilers: Skipping system library: -lc compilers: Checking arg -lgcc_s compilers: Checking arg -lgcc compilers: Skipping system library: -lgcc compilers: Checking arg /usr/lib/gcc/x86_64-linux-gnu/4.7/crtend.o compilers: Unknown arg /usr/lib/gcc/x86_64-linux-gnu/4.7/crtend.o compilers: Checking arg /usr/lib/gcc/x86_64-linux-gnu/4.7/../../../x86_64-linux-gnu/crtn.o compilers: Unknown arg /usr/lib/gcc/x86_64-linux-gnu/4.7/../../../x86_64-linux-gnu/crtn.o compilers: Libraries needed to link Cxx code with another linker: ['-Wl,-rpath,/home/hills/seska/packages/openmpi/lib', '-L/home/hills/seska/packages/openmpi/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib', '-L/home/hills/seska/packages/tau/x86_64/lib', '-Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7', '-L/usr/lib/gcc/x86_64-linux-gnu/4.7', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-Wl,-rpath,/usr/lib/x86_64-linux-gnu', '-L/usr/lib/x86_64-linux-gnu', '-Wl,-rpath,/lib/x86_64-linux-gnu', '-L/lib/x86_64-linux-gnu', '-Wl,-rpath,/home/hills/seska/packages/openmpi/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib', '-Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-Wl,-rpath,/usr/lib/x86_64-linux-gnu', '-Wl,-rpath,/lib/x86_64-linux-gnu', '-lmpichcxx'] compilers: Check that Cxx libraries can be used from C Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -fPIC -g /tmp/petsc-U9YCMv/config.setCompilers/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -fPIC -g /tmp/petsc-U9YCMv/config.setCompilers/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.setCompilers/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.setCompilers/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -fPIC -g /tmp/petsc-U9YCMv/config.setCompilers/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -fPIC -g /tmp/petsc-U9YCMv/config.setCompilers/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.setCompilers/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.setCompilers/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.setCompilers/conftest -fPIC -g /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lmpichcxx -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.setCompilers/conftest -fPIC -g /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lmpichcxx -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpichcxx -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.setCompilers/conftest -fPIC -g /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichcxx -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -fPIC -g /tmp/petsc-U9YCMv/config.setCompilers/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -fPIC -g /tmp/petsc-U9YCMv/config.setCompilers/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.setCompilers/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.setCompilers/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.setCompilers/conftest -fPIC -g /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lmpichcxx -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.setCompilers/conftest -fPIC -g /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lmpichcxx -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpichcxx -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.setCompilers/conftest -fPIC -g /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichcxx -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Executing: /tmp/petsc-U9YCMv/config.setCompilers/conftest sh: /tmp/petsc-U9YCMv/config.setCompilers/conftest Executing: /tmp/petsc-U9YCMv/config.setCompilers/conftest sh: Popping language C compilers: Check that Cxx libraries can be used from Fortran Pushing language FC sh: mpif90 -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -fPIC -Wall -Wno-unused-variable -Wno-unused-dummy-argument -g /tmp/petsc-U9YCMv/config.setCompilers/conftest.F Executing: mpif90 -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -fPIC -Wall -Wno-unused-variable -Wno-unused-dummy-argument -g /tmp/petsc-U9YCMv/config.setCompilers/conftest.F sh: Successful compile: Source: program main end sh: mpif90 -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -fPIC -Wall -Wno-unused-variable -Wno-unused-dummy-argument -g /tmp/petsc-U9YCMv/config.setCompilers/conftest.F Executing: mpif90 -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -fPIC -Wall -Wno-unused-variable -Wno-unused-dummy-argument -g /tmp/petsc-U9YCMv/config.setCompilers/conftest.F sh: Successful compile: Source: program main end Pushing language FC Popping language FC sh: mpif90 -o /tmp/petsc-U9YCMv/config.setCompilers/conftest -fPIC -Wall -Wno-unused-variable -Wno-unused-dummy-argument -g /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lmpichcxx -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: mpif90 -o /tmp/petsc-U9YCMv/config.setCompilers/conftest -fPIC -Wall -Wno-unused-variable -Wno-unused-dummy-argument -g /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lmpichcxx -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: sh: mpif90 -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -fPIC -Wall -Wno-unused-variable -Wno-unused-dummy-argument -g /tmp/petsc-U9YCMv/config.setCompilers/conftest.F Executing: mpif90 -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -fPIC -Wall -Wno-unused-variable -Wno-unused-dummy-argument -g /tmp/petsc-U9YCMv/config.setCompilers/conftest.F sh: Successful compile: Source: program main end Pushing language FC Popping language FC sh: mpif90 -o /tmp/petsc-U9YCMv/config.setCompilers/conftest -fPIC -Wall -Wno-unused-variable -Wno-unused-dummy-argument -g /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lmpichcxx -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: mpif90 -o /tmp/petsc-U9YCMv/config.setCompilers/conftest -fPIC -Wall -Wno-unused-variable -Wno-unused-dummy-argument -g /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lmpichcxx -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Executing: /tmp/petsc-U9YCMv/config.setCompilers/conftest sh: /tmp/petsc-U9YCMv/config.setCompilers/conftest Executing: /tmp/petsc-U9YCMv/config.setCompilers/conftest sh: Popping language FC ================================================================================ TEST checkFortranTypeSizes from config.compilers(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/compilers.py:528) TESTING: checkFortranTypeSizes from config.compilers(config/BuildSystem/config/compilers.py:528) Check whether real*8 is supported and suggest flags which will allow support Pushing language FC sh: mpif90 -c -o /tmp/petsc-U9YCMv/config.compilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -fPIC -Wall -Wno-unused-variable -Wno-unused-dummy-argument -g /tmp/petsc-U9YCMv/config.compilers/conftest.F Executing: mpif90 -c -o /tmp/petsc-U9YCMv/config.compilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -fPIC -Wall -Wno-unused-variable -Wno-unused-dummy-argument -g /tmp/petsc-U9YCMv/config.compilers/conftest.F sh: Successful compile: Source: program main real*8 variable end Popping language FC ================================================================================ TEST checkFortranNameMangling from config.compilers(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/compilers.py:587) TESTING: checkFortranNameMangling from config.compilers(config/BuildSystem/config/compilers.py:587) Checks Fortran name mangling, and defines HAVE_FORTRAN_UNDERSCORE, HAVE_FORTRAN_NOUNDERSCORE, HAVE_FORTRAN_CAPS, or HAVE_FORTRAN_STDCALL Testing Fortran mangling type underscore with code void d1chk_(void){return;} Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.compilers/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -fPIC -g /tmp/petsc-U9YCMv/config.compilers/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.compilers/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -fPIC -g /tmp/petsc-U9YCMv/config.compilers/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.compilers/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.compilers Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.compilers/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.compilers -o /tmp/petsc-U9YCMv/config.compilers/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" void d1chk_(void){return;} Popping language C Pushing language FC sh: mpif90 -c -o /tmp/petsc-U9YCMv/config.compilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -fPIC -Wall -Wno-unused-variable -Wno-unused-dummy-argument -g /tmp/petsc-U9YCMv/config.compilers/conftest.F Executing: mpif90 -c -o /tmp/petsc-U9YCMv/config.compilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -fPIC -Wall -Wno-unused-variable -Wno-unused-dummy-argument -g /tmp/petsc-U9YCMv/config.compilers/conftest.F sh: Successful compile: Source: program main call d1chk() end Pushing language FC Popping language FC sh: mpif90 -o /tmp/petsc-U9YCMv/config.compilers/conftest -fPIC -Wall -Wno-unused-variable -Wno-unused-dummy-argument -g /tmp/petsc-U9YCMv/config.compilers/conftest.o /tmp/petsc-U9YCMv/config.compilers/confc.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: mpif90 -o /tmp/petsc-U9YCMv/config.compilers/conftest -fPIC -Wall -Wno-unused-variable -Wno-unused-dummy-argument -g /tmp/petsc-U9YCMv/config.compilers/conftest.o /tmp/petsc-U9YCMv/config.compilers/confc.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Popping language FC compilers: Fortran name mangling is underscore Defined "HAVE_FORTRAN_UNDERSCORE" to "1" ================================================================================ TEST checkFortranNameManglingDouble from config.compilers(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/compilers.py:624) TESTING: checkFortranNameManglingDouble from config.compilers(config/BuildSystem/config/compilers.py:624) Checks if symbols containing an underscore append an extra underscore, and defines HAVE_FORTRAN_UNDERSCORE_UNDERSCORE if necessary Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.compilers/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -fPIC -g /tmp/petsc-U9YCMv/config.compilers/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.compilers/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -fPIC -g /tmp/petsc-U9YCMv/config.compilers/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.compilers/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.compilers Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.compilers/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.compilers -o /tmp/petsc-U9YCMv/config.compilers/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" void d1_chk__(void){return;} Popping language C Pushing language FC sh: mpif90 -c -o /tmp/petsc-U9YCMv/config.compilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -fPIC -Wall -Wno-unused-variable -Wno-unused-dummy-argument -g /tmp/petsc-U9YCMv/config.compilers/conftest.F Executing: mpif90 -c -o /tmp/petsc-U9YCMv/config.compilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -fPIC -Wall -Wno-unused-variable -Wno-unused-dummy-argument -g /tmp/petsc-U9YCMv/config.compilers/conftest.F sh: Successful compile: Source: program main call d1_chk() end Pushing language FC Popping language FC sh: mpif90 -o /tmp/petsc-U9YCMv/config.compilers/conftest -fPIC -Wall -Wno-unused-variable -Wno-unused-dummy-argument -g /tmp/petsc-U9YCMv/config.compilers/conftest.o /tmp/petsc-U9YCMv/config.compilers/confc.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: mpif90 -o /tmp/petsc-U9YCMv/config.compilers/conftest -fPIC -Wall -Wno-unused-variable -Wno-unused-dummy-argument -g /tmp/petsc-U9YCMv/config.compilers/conftest.o /tmp/petsc-U9YCMv/config.compilers/confc.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Possible ERROR while running linker: /tmp/petsc-U9YCMv/config.compilers/conftest.o: In function `MAIN__': /tmp/petsc-U9YCMv/config.compilers/conftest.F:2: undefined reference to `d1_chk_' collect2: error: ld returned 1 exit status output: ret = 256 error message = {/tmp/petsc-U9YCMv/config.compilers/conftest.o: In function `MAIN__': /tmp/petsc-U9YCMv/config.compilers/conftest.F:2: undefined reference to `d1_chk_' collect2: error: ld returned 1 exit status } Pushing language FC Popping language FC in mpif90 -o /tmp/petsc-U9YCMv/config.compilers/conftest -fPIC -Wall -Wno-unused-variable -Wno-unused-dummy-argument -g /tmp/petsc-U9YCMv/config.compilers/conftest.o /tmp/petsc-U9YCMv/config.compilers/confc.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Source: program main call d1_chk() end Popping language FC ================================================================================ TEST checkFortranPreprocessor from config.compilers(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/compilers.py:634) TESTING: checkFortranPreprocessor from config.compilers(config/BuildSystem/config/compilers.py:634) Determine if Fortran handles preprocessing properly Pushing language FC sh: mpif90 -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -fPIC -Wall -Wno-unused-variable -Wno-unused-dummy-argument -g /tmp/petsc-U9YCMv/config.setCompilers/conftest.F Executing: mpif90 -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -fPIC -Wall -Wno-unused-variable -Wno-unused-dummy-argument -g /tmp/petsc-U9YCMv/config.setCompilers/conftest.F sh: Successful compile: Source: program main #define dummy dummy #ifndef dummy fooey #endif end Added FC compiler flag Popping language FC compilers: Fortran uses CPP preprocessor ================================================================================ TEST checkFortranDefineCompilerOption from config.compilers(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/compilers.py:655) TESTING: checkFortranDefineCompilerOption from config.compilers(config/BuildSystem/config/compilers.py:655) Check if -WF,-Dfoobar or -Dfoobar is the compiler option to define a macro Pushing language FC sh: mpif90 -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -fPIC -Wall -Wno-unused-variable -Wno-unused-dummy-argument -g -DTesting /tmp/petsc-U9YCMv/config.setCompilers/conftest.F Executing: mpif90 -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -fPIC -Wall -Wno-unused-variable -Wno-unused-dummy-argument -g -DTesting /tmp/petsc-U9YCMv/config.setCompilers/conftest.F sh: Successful compile: Source: program main #define dummy dummy #ifndef Testing fooey #endif end Popping language FC compilers: Fortran uses -D for defining macro ================================================================================ TEST checkFortranLibraries from config.compilers(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/compilers.py:671) TESTING: checkFortranLibraries from config.compilers(config/BuildSystem/config/compilers.py:671) Substitutes for FLIBS the libraries needed to link with Fortran This macro is intended to be used in those situations when it is necessary to mix, e.g. C++ and Fortran 77, source code into a single program or shared library. For example, if object files from a C++ and Fortran 77 compiler must be linked together, then the C++ compiler/linker must be used for linking (since special C++-ish things need to happen at link time like calling global constructors, instantiating templates, enabling exception support, etc.). However, the Fortran 77 intrinsic and run-time libraries must be linked in as well, but the C++ compiler/linker does not know how to add these Fortran 77 libraries. This code was translated from the autoconf macro which was packaged in its current form by Matthew D. Langston . However, nearly all of this macro came from the OCTAVE_FLIBS macro in octave-2.0.13/aclocal.m4, and full credit should go to John W. Eaton for writing this extremely useful macro. Pushing language FC sh: mpif90 -V Executing: mpif90 -V sh: sh: mpif90 -c -o /tmp/petsc-U9YCMv/config.compilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -fPIC -Wall -Wno-unused-variable -Wno-unused-dummy-argument -g /tmp/petsc-U9YCMv/config.compilers/conftest.F Executing: mpif90 -c -o /tmp/petsc-U9YCMv/config.compilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -fPIC -Wall -Wno-unused-variable -Wno-unused-dummy-argument -g /tmp/petsc-U9YCMv/config.compilers/conftest.F sh: Successful compile: Source: program main end Pushing language FC Popping language FC sh: mpif90 -o /tmp/petsc-U9YCMv/config.compilers/conftest -v -fPIC -Wall -Wno-unused-variable -Wno-unused-dummy-argument -g /tmp/petsc-U9YCMv/config.compilers/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: mpif90 -o /tmp/petsc-U9YCMv/config.compilers/conftest -v -fPIC -Wall -Wno-unused-variable -Wno-unused-dummy-argument -g /tmp/petsc-U9YCMv/config.compilers/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: mpif90 for MPICH version 3.0.4 Possible ERROR while running linker: Driving: gfortran -g -o /tmp/petsc-U9YCMv/config.compilers/conftest -v -fPIC -Wall -Wno-unused-variable -Wno-unused-dummy-argument -g /tmp/petsc-U9YCMv/config.compilers/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpichf90 -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -l gfortran -l m -shared-libgcc -specs=/usr/lib/gcc/x86_64-linux-gnu/4.7/libgfortran.spec Using built-in specs. Reading specs from /usr/lib/gcc/x86_64-linux-gnu/4.7/libgfortran.spec rename spec lib to liborig COLLECT_GCC=gfortran COLLECT_LTO_WRAPPER=/usr/lib/gcc/x86_64-linux-gnu/4.7/lto-wrapper Target: x86_64-linux-gnu Configured with: ../src/configure -v --with-pkgversion='Ubuntu/Linaro 4.7.3-1ubuntu1' --with-bugurl=file:///usr/share/doc/gcc-4.7/README.Bugs --enable-languages=c,c++,go,fortran,objc,obj-c++ --prefix=/usr --program-suffix=-4.7 --enable-shared --enable-linker-build-id --libexecdir=/usr/lib --without-included-gettext --enable-threads=posix --with-gxx-include-dir=/usr/include/c++/4.7 --libdir=/usr/lib --enable-nls --with-sysroot=/ --enable-clocale=gnu --enable-libstdcxx-debug --enable-libstdcxx-time=yes --enable-gnu-unique-object --enable-plugin --with-system-zlib --enable-objc-gc --with-cloog --enable-cloog-backend=ppl --disable-cloog-version-check --disable-ppl-version-check --enable-multiarch --disable-werror --with-arch-32=i686 --with-abi=m64 --with-multilib-list=m32,m64,mx32 --with-tune=generic --enable-checking=release --build=x86_64-linux-gnu --host=x86_64-linux-gnu --target=x86_64-linux-gnu Thread model: posix gcc version 4.7.3 (Ubuntu/Linaro 4.7.3-1ubuntu1) COMPILER_PATH=/usr/lib/gcc/x86_64-linux-gnu/4.7/:/usr/lib/gcc/x86_64-linux-gnu/4.7/:/usr/lib/gcc/x86_64-linux-gnu/:/usr/lib/gcc/x86_64-linux-gnu/4.7/:/usr/lib/gcc/x86_64-linux-gnu/ LIBRARY_PATH=/usr/lib/gcc/x86_64-linux-gnu/4.7/:/usr/lib/gcc/x86_64-linux-gnu/4.7/../../../x86_64-linux-gnu/:/usr/lib/gcc/x86_64-linux-gnu/4.7/../../../../lib/:/lib/x86_64-linux-gnu/:/lib/../lib/:/usr/lib/x86_64-linux-gnu/:/usr/lib/../lib/:/usr/lib/gcc/x86_64-linux-gnu/4.7/../../../:/lib/:/usr/lib/ COLLECT_GCC_OPTIONS='-g' '-o' '/tmp/petsc-U9YCMv/config.compilers/conftest' '-v' '-fPIC' '-Wall' '-Wno-unused-variable' '-Wno-unused-dummy-argument' '-g' '-L/home/hills/seska/packages/openmpi/lib' '-L/home/hills/seska/packages/tau/x86_64/lib' '-L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib' '-L/home/hills/seska/packages/tau/x86_64/lib' '-L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib' '-L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64' '-L/home/hills/seska/packages/openmpi/lib' '-L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib' '-L/usr/lib/gcc/x86_64-linux-gnu/4.7' '-L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt' '-L/home/hills/seska/packages/openmpi/lib' '-L/home/hills/seska/packages/tau/x86_64/lib' '-L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib' '-L/home/hills/seska/packages/tau/x86_64/lib' '-L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib' '-L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64' '-L/home/hills/seska/packages/openmpi/lib' '-L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib' '-L/usr/lib/gcc/x86_64-linux-gnu/4.7' '-L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt' '-L/usr/lib/gcc/x86_64-linux-gnu/4.7' '-L/usr/lib/x86_64-linux-gnu' '-L/lib/x86_64-linux-gnu' '-L/usr/lib/x86_64-linux-gnu' '-I' '/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include' '-I' '/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include' '-L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib' '-shared-libgcc' '-mtune=generic' '-march=x86-64' /usr/lib/gcc/x86_64-linux-gnu/4.7/collect2 --sysroot=/ --build-id --eh-frame-hdr -m elf_x86_64 --hash-style=gnu --as-needed -dynamic-linker /lib64/ld-linux-x86-64.so.2 -z relro -o /tmp/petsc-U9YCMv/config.compilers/conftest /usr/lib/gcc/x86_64-linux-gnu/4.7/../../../x86_64-linux-gnu/crt1.o /usr/lib/gcc/x86_64-linux-gnu/4.7/../../../x86_64-linux-gnu/crti.o /usr/lib/gcc/x86_64-linux-gnu/4.7/crtbegin.o -L/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/4.7/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/4.7/../../.. /tmp/petsc-U9YCMv/config.compilers/conftest.o -ldl -rpath /home/hills/seska/packages/openmpi/lib -lmpi_f77 -rpath /home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -rpath /home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -rpath /home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -rpath /home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -rpath /home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -rpath /home/hills/seska/packages/openmpi/lib -rpath /home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -rpath /usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -rpath /home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -rpath /home/hills/seska/packages/openmpi/lib -rpath /home/hills/seska/packages/tau/x86_64/lib -rpath /home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -rpath /home/hills/seska/packages/tau/x86_64/lib -rpath /home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -rpath /home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -rpath /home/hills/seska/packages/openmpi/lib -rpath /home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -rpath /usr/lib/gcc/x86_64-linux-gnu/4.7 -rpath /home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -rpath /usr/lib/gcc/x86_64-linux-gnu/4.7 -rpath /usr/lib/x86_64-linux-gnu -rpath /lib/x86_64-linux-gnu -rpath /usr/lib/x86_64-linux-gnu -rpath /home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -rpath /home/hills/seska/packages/openmpi/lib -ldl -lmpichf90 -rpath /home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lgfortran -lm -lgcc_s -lgcc -lquadmath -lm -lgcc_s -lgcc -lc -lgcc_s -lgcc /usr/lib/gcc/x86_64-linux-gnu/4.7/crtend.o /usr/lib/gcc/x86_64-linux-gnu/4.7/../../../x86_64-linux-gnu/crtn.o output: mpif90 for MPICH version 3.0.4 error message = {Driving: gfortran -g -o /tmp/petsc-U9YCMv/config.compilers/conftest -v -fPIC -Wall -Wno-unused-variable -Wno-unused-dummy-argument -g /tmp/petsc-U9YCMv/config.compilers/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpichf90 -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -l gfortran -l m -shared-libgcc -specs=/usr/lib/gcc/x86_64-linux-gnu/4.7/libgfortran.spec Using built-in specs. Reading specs from /usr/lib/gcc/x86_64-linux-gnu/4.7/libgfortran.spec rename spec lib to liborig COLLECT_GCC=gfortran COLLECT_LTO_WRAPPER=/usr/lib/gcc/x86_64-linux-gnu/4.7/lto-wrapper Target: x86_64-linux-gnu Configured with: ../src/configure -v --with-pkgversion='Ubuntu/Linaro 4.7.3-1ubuntu1' --with-bugurl=file:///usr/share/doc/gcc-4.7/README.Bugs --enable-languages=c,c++,go,fortran,objc,obj-c++ --prefix=/usr --program-suffix=-4.7 --enable-shared --enable-linker-build-id --libexecdir=/usr/lib --without-included-gettext --enable-threads=posix --with-gxx-include-dir=/usr/include/c++/4.7 --libdir=/usr/lib --enable-nls --with-sysroot=/ --enable-clocale=gnu --enable-libstdcxx-debug --enable-libstdcxx-time=yes --enable-gnu-unique-object --enable-plugin --with-system-zlib --enable-objc-gc --with-cloog --enable-cloog-backend=ppl --disable-cloog-version-check --disable-ppl-version-check --enable-multiarch --disable-werror --with-arch-32=i686 --with-abi=m64 --with-multilib-list=m32,m64,mx32 --with-tune=generic --enable-checking=release --build=x86_64-linux-gnu --host=x86_64-linux-gnu --target=x86_64-linux-gnu Thread model: posix gcc version 4.7.3 (Ubuntu/Linaro 4.7.3-1ubuntu1) COMPILER_PATH=/usr/lib/gcc/x86_64-linux-gnu/4.7/:/usr/lib/gcc/x86_64-linux-gnu/4.7/:/usr/lib/gcc/x86_64-linux-gnu/:/usr/lib/gcc/x86_64-linux-gnu/4.7/:/usr/lib/gcc/x86_64-linux-gnu/ LIBRARY_PATH=/usr/lib/gcc/x86_64-linux-gnu/4.7/:/usr/lib/gcc/x86_64-linux-gnu/4.7/../../../x86_64-linux-gnu/:/usr/lib/gcc/x86_64-linux-gnu/4.7/../../../../lib/:/lib/x86_64-linux-gnu/:/lib/../lib/:/usr/lib/x86_64-linux-gnu/:/usr/lib/../lib/:/usr/lib/gcc/x86_64-linux-gnu/4.7/../../../:/lib/:/usr/lib/ COLLECT_GCC_OPTIONS='-g' '-o' '/tmp/petsc-U9YCMv/config.compilers/conftest' '-v' '-fPIC' '-Wall' '-Wno-unused-variable' '-Wno-unused-dummy-argument' '-g' '-L/home/hills/seska/packages/openmpi/lib' '-L/home/hills/seska/packages/tau/x86_64/lib' '-L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib' '-L/home/hills/seska/packages/tau/x86_64/lib' '-L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib' '-L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64' '-L/home/hills/seska/packages/openmpi/lib' '-L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib' '-L/usr/lib/gcc/x86_64-linux-gnu/4.7' '-L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt' '-L/home/hills/seska/packages/openmpi/lib' '-L/home/hills/seska/packages/tau/x86_64/lib' '-L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib' '-L/home/hills/seska/packages/tau/x86_64/lib' '-L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib' '-L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64' '-L/home/hills/seska/packages/openmpi/lib' '-L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib' '-L/usr/lib/gcc/x86_64-linux-gnu/4.7' '-L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt' '-L/usr/lib/gcc/x86_64-linux-gnu/4.7' '-L/usr/lib/x86_64-linux-gnu' '-L/lib/x86_64-linux-gnu' '-L/usr/lib/x86_64-linux-gnu' '-I' '/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include' '-I' '/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include' '-L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib' '-shared-libgcc' '-mtune=generic' '-march=x86-64' /usr/lib/gcc/x86_64-linux-gnu/4.7/collect2 --sysroot=/ --build-id --eh-frame-hdr -m elf_x86_64 --hash-style=gnu --as-needed -dynamic-linker /lib64/ld-linux-x86-64.so.2 -z relro -o /tmp/petsc-U9YCMv/config.compilers/conftest /usr/lib/gcc/x86_64-linux-gnu/4.7/../../../x86_64-linux-gnu/crt1.o /usr/lib/gcc/x86_64-linux-gnu/4.7/../../../x86_64-linux-gnu/crti.o /usr/lib/gcc/x86_64-linux-gnu/4.7/crtbegin.o -L/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/4.7/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/4.7/../../.. /tmp/petsc-U9YCMv/config.compilers/conftest.o -ldl -rpath /home/hills/seska/packages/openmpi/lib -lmpi_f77 -rpath /home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -rpath /home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -rpath /home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -rpath /home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -rpath /home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -rpath /home/hills/seska/packages/openmpi/lib -rpath /home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -rpath /usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -rpath /home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -rpath /home/hills/seska/packages/openmpi/lib -rpath /home/hills/seska/packages/tau/x86_64/lib -rpath /home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -rpath /home/hills/seska/packages/tau/x86_64/lib -rpath /home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -rpath /home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -rpath /home/hills/seska/packages/openmpi/lib -rpath /home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -rpath /usr/lib/gcc/x86_64-linux-gnu/4.7 -rpath /home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -rpath /usr/lib/gcc/x86_64-linux-gnu/4.7 -rpath /usr/lib/x86_64-linux-gnu -rpath /lib/x86_64-linux-gnu -rpath /usr/lib/x86_64-linux-gnu -rpath /home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -rpath /home/hills/seska/packages/openmpi/lib -ldl -lmpichf90 -rpath /home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lgfortran -lm -lgcc_s -lgcc -lquadmath -lm -lgcc_s -lgcc -lc -lgcc_s -lgcc /usr/lib/gcc/x86_64-linux-gnu/4.7/crtend.o /usr/lib/gcc/x86_64-linux-gnu/4.7/../../../x86_64-linux-gnu/crtn.o } Pushing language FC Popping language FC in mpif90 -o /tmp/petsc-U9YCMv/config.compilers/conftest -v -fPIC -Wall -Wno-unused-variable -Wno-unused-dummy-argument -g /tmp/petsc-U9YCMv/config.compilers/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Source: program main end Popping language FC compilers: Checking arg mpif90 compilers: Unknown arg mpif90 compilers: Checking arg for compilers: Unknown arg for compilers: Checking arg MPICH compilers: Unknown arg MPICH compilers: Checking arg version compilers: Unknown arg version compilers: Checking arg 3.0.4 compilers: Unknown arg 3.0.4 compilers: Checking arg Driving: compilers: Unknown arg Driving: compilers: Checking arg gfortran compilers: Unknown arg gfortran compilers: Checking arg -g compilers: Unknown arg -g compilers: Checking arg -o compilers: Unknown arg -o compilers: Checking arg /tmp/petsc-U9YCMv/config.compilers/conftest compilers: Unknown arg /tmp/petsc-U9YCMv/config.compilers/conftest compilers: Checking arg -v compilers: Unknown arg -v compilers: Checking arg -fPIC compilers: Unknown arg -fPIC compilers: Checking arg -Wall compilers: Unknown arg -Wall compilers: Checking arg -Wno-unused-variable compilers: Unknown arg -Wno-unused-variable compilers: Checking arg -Wno-unused-dummy-argument compilers: Unknown arg -Wno-unused-dummy-argument compilers: Checking arg -g compilers: Unknown arg -g compilers: Checking arg /tmp/petsc-U9YCMv/config.compilers/conftest.o compilers: Unknown arg /tmp/petsc-U9YCMv/config.compilers/conftest.o compilers: Checking arg -ldl compilers: Found library: -ldl Library already in C list so skipping in Fortran compilers: Checking arg -Wl,-rpath,/home/hills/seska/packages/openmpi/lib compilers: Unknown arg -Wl,-rpath,/home/hills/seska/packages/openmpi/lib compilers: Checking arg -L/home/hills/seska/packages/openmpi/lib compilers: Found library directory: -L/home/hills/seska/packages/openmpi/lib compilers: Checking arg -lmpi_f77 compilers: Found library: -lmpi_f77 Library already in C list so skipping in Fortran compilers: Checking arg -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib compilers: Unknown arg -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib compilers: Checking arg -L/home/hills/seska/packages/tau/x86_64/lib compilers: Found library directory: -L/home/hills/seska/packages/tau/x86_64/lib compilers: Checking arg -lTauMpi-mpi-pdt compilers: Found library: -lTauMpi-mpi-pdt Library already in C list so skipping in Fortran compilers: Checking arg -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib compilers: Unknown arg -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib compilers: Checking arg -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib compilers: Found library directory: -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib compilers: Checking arg -lmpich compilers: Found library: -lmpich Library already in C list so skipping in Fortran compilers: Checking arg -lopa compilers: Found library: -lopa Library already in C list so skipping in Fortran compilers: Checking arg -lmpl compilers: Found library: -lmpl Library already in C list so skipping in Fortran compilers: Checking arg -lrt compilers: Found library: -lrt Library already in C list so skipping in Fortran compilers: Checking arg -lpthread compilers: Found library: -lpthread Library already in C list so skipping in Fortran compilers: Checking arg -lmpi compilers: Found library: -lmpi Library already in C list so skipping in Fortran compilers: Checking arg -lmpi_cxx compilers: Found library: -lmpi_cxx Library already in C list so skipping in Fortran compilers: Checking arg -lmpi_f90 compilers: Found library: -lmpi_f90 Library already in C list so skipping in Fortran compilers: Checking arg -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib compilers: Unknown arg -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib compilers: Checking arg -L/home/hills/seska/packages/tau/x86_64/lib compilers: Already in lflags so skipping: -L/home/hills/seska/packages/tau/x86_64/lib compilers: Checking arg -ltau-mpi-pdt compilers: Found library: -ltau-mpi-pdt Library already in C list so skipping in Fortran compilers: Checking arg -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib compilers: Unknown arg -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib compilers: Checking arg -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib compilers: Found library directory: -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib compilers: Checking arg -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 compilers: Unknown arg -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 compilers: Checking arg -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 compilers: Found library directory: -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 compilers: Checking arg -lbfd compilers: Found library: -lbfd Library already in C list so skipping in Fortran compilers: Checking arg -liberty compilers: Found library: -liberty Library already in C list so skipping in Fortran compilers: Checking arg -Wl,-rpath,/home/hills/seska/packages/openmpi/lib compilers: Unknown arg -Wl,-rpath,/home/hills/seska/packages/openmpi/lib compilers: Checking arg -L/home/hills/seska/packages/openmpi/lib compilers: Already in lflags so skipping: -L/home/hills/seska/packages/openmpi/lib compilers: Checking arg -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib compilers: Unknown arg -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib compilers: Checking arg -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib compilers: Already in lflags so skipping: -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib compilers: Checking arg -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 compilers: Unknown arg -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 compilers: Checking arg -L/usr/lib/gcc/x86_64-linux-gnu/4.7 compilers: Found library directory: -L/usr/lib/gcc/x86_64-linux-gnu/4.7 compilers: Checking arg -lstdc++ compilers: Found library: -lstdc++ Library already in C list so skipping in Fortran compilers: Checking arg -lgcc_s compilers: Found library: -lgcc_s Library already in C list so skipping in Fortran compilers: Checking arg -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt compilers: Unknown arg -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt compilers: Checking arg -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt compilers: Found library directory: -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt compilers: Checking arg -Wl,-rpath,/home/hills/seska/packages/openmpi/lib compilers: Unknown arg -Wl,-rpath,/home/hills/seska/packages/openmpi/lib compilers: Checking arg -L/home/hills/seska/packages/openmpi/lib compilers: Already in lflags so skipping: -L/home/hills/seska/packages/openmpi/lib compilers: Checking arg -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib compilers: Unknown arg -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib compilers: Checking arg -L/home/hills/seska/packages/tau/x86_64/lib compilers: Already in lflags so skipping: -L/home/hills/seska/packages/tau/x86_64/lib compilers: Checking arg -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib compilers: Unknown arg -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib compilers: Checking arg -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib compilers: Already in lflags so skipping: -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib compilers: Checking arg -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib compilers: Unknown arg -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib compilers: Checking arg -L/home/hills/seska/packages/tau/x86_64/lib compilers: Already in lflags so skipping: -L/home/hills/seska/packages/tau/x86_64/lib compilers: Checking arg -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib compilers: Unknown arg -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib compilers: Checking arg -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib compilers: Already in lflags so skipping: -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib compilers: Checking arg -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 compilers: Unknown arg -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 compilers: Checking arg -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 compilers: Already in lflags so skipping: -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 compilers: Checking arg -Wl,-rpath,/home/hills/seska/packages/openmpi/lib compilers: Unknown arg -Wl,-rpath,/home/hills/seska/packages/openmpi/lib compilers: Checking arg -L/home/hills/seska/packages/openmpi/lib compilers: Already in lflags so skipping: -L/home/hills/seska/packages/openmpi/lib compilers: Checking arg -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib compilers: Unknown arg -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib compilers: Checking arg -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib compilers: Already in lflags so skipping: -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib compilers: Checking arg -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 compilers: Unknown arg -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 compilers: Checking arg -L/usr/lib/gcc/x86_64-linux-gnu/4.7 compilers: Already in lflags so skipping: -L/usr/lib/gcc/x86_64-linux-gnu/4.7 compilers: Checking arg -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt compilers: Unknown arg -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt compilers: Checking arg -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt compilers: Already in lflags so skipping: -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt compilers: Checking arg -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 compilers: Unknown arg -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 compilers: Checking arg -L/usr/lib/gcc/x86_64-linux-gnu/4.7 compilers: Already in lflags so skipping: -L/usr/lib/gcc/x86_64-linux-gnu/4.7 compilers: Checking arg -Wl,-rpath,/usr/lib/x86_64-linux-gnu compilers: Unknown arg -Wl,-rpath,/usr/lib/x86_64-linux-gnu compilers: Checking arg -L/usr/lib/x86_64-linux-gnu compilers: Found library directory: -L/usr/lib/x86_64-linux-gnu compilers: Checking arg -Wl,-rpath,/lib/x86_64-linux-gnu compilers: Unknown arg -Wl,-rpath,/lib/x86_64-linux-gnu compilers: Checking arg -L/lib/x86_64-linux-gnu compilers: Found library directory: -L/lib/x86_64-linux-gnu compilers: Checking arg -Wl,-rpath,/usr/lib/x86_64-linux-gnu compilers: Unknown arg -Wl,-rpath,/usr/lib/x86_64-linux-gnu compilers: Checking arg -L/usr/lib/x86_64-linux-gnu compilers: Already in lflags so skipping: -L/usr/lib/x86_64-linux-gnu compilers: Checking arg -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib compilers: Unknown arg -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib compilers: Checking arg -Wl,-rpath,/home/hills/seska/packages/openmpi/lib compilers: Unknown arg -Wl,-rpath,/home/hills/seska/packages/openmpi/lib compilers: Checking arg -ldl compilers: Already in lflags: -ldl compilers: Checking arg -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include compilers: Found include directory: /home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include compilers: Checking arg -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include compilers: Found include directory: /home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include compilers: Checking arg -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib compilers: Already in lflags so skipping: -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib compilers: Checking arg -lmpichf90 compilers: Found library: -lmpichf90 compilers: Checking arg -Wl,-rpath compilers: Unknown arg -Wl,-rpath compilers: Checking arg -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib compilers: Unknown arg -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib compilers: Checking arg -lmpich compilers: Already in lflags: -lmpich compilers: Checking arg -lopa compilers: Already in lflags: -lopa compilers: Checking arg -lmpl compilers: Already in lflags: -lmpl compilers: Checking arg -lrt compilers: Already in lflags: -lrt compilers: Checking arg -lpthread compilers: Already in lflags: -lpthread compilers: Checking arg -l compilers: Found canonical library: -lgfortran compilers: Checking arg -l compilers: Found canonical library: -lm compilers: Checking arg -shared-libgcc compilers: Unknown arg -shared-libgcc compilers: Checking arg -specs=/usr/lib/gcc/x86_64-linux-gnu/4.7/libgfortran.spec compilers: Unknown arg -specs=/usr/lib/gcc/x86_64-linux-gnu/4.7/libgfortran.spec compilers: Checking arg Using compilers: Unknown arg Using compilers: Checking arg built-in compilers: Unknown arg built-in compilers: Checking arg specs. compilers: Unknown arg specs. compilers: Checking arg Reading compilers: Unknown arg Reading compilers: Checking arg specs compilers: Unknown arg specs compilers: Checking arg from compilers: Unknown arg from compilers: Checking arg /usr/lib/gcc/x86_64-linux-gnu/4.7/libgfortran.spec compilers: Unknown arg /usr/lib/gcc/x86_64-linux-gnu/4.7/libgfortran.spec compilers: Checking arg rename compilers: Unknown arg rename compilers: Checking arg spec compilers: Unknown arg spec compilers: Checking arg lib compilers: Unknown arg lib compilers: Checking arg to compilers: Unknown arg to compilers: Checking arg liborig compilers: Unknown arg liborig compilers: Checking arg COLLECT_GCC=gfortran compilers: Unknown arg COLLECT_GCC=gfortran compilers: Checking arg COLLECT_LTO_WRAPPER=/usr/lib/gcc/x86_64-linux-gnu/4.7/lto-wrapper compilers: Unknown arg COLLECT_LTO_WRAPPER=/usr/lib/gcc/x86_64-linux-gnu/4.7/lto-wrapper compilers: Checking arg Target: compilers: Unknown arg Target: compilers: Checking arg x86_64-linux-gnu compilers: Unknown arg x86_64-linux-gnu compilers: Checking arg Configured compilers: Unknown arg Configured compilers: Checking arg with: compilers: Unknown arg with: compilers: Checking arg ../src/configure compilers: Unknown arg ../src/configure compilers: Checking arg -v compilers: Unknown arg -v compilers: Checking arg --with-pkgversion= compilers: Unknown arg --with-pkgversion= compilers: Checking arg --with-bugurl=file:///usr/share/doc/gcc-4.7/README.Bugs compilers: Unknown arg --with-bugurl=file:///usr/share/doc/gcc-4.7/README.Bugs compilers: Checking arg --enable-languages=c,c++,go,fortran,objc,obj-c++ compilers: Unknown arg --enable-languages=c,c++,go,fortran,objc,obj-c++ compilers: Checking arg --prefix=/usr compilers: Unknown arg --prefix=/usr compilers: Checking arg --program-suffix=-4.7 compilers: Unknown arg --program-suffix=-4.7 compilers: Checking arg --enable-shared compilers: Unknown arg --enable-shared compilers: Checking arg --enable-linker-build-id compilers: Unknown arg --enable-linker-build-id compilers: Checking arg --libexecdir=/usr/lib compilers: Unknown arg --libexecdir=/usr/lib compilers: Checking arg --without-included-gettext compilers: Unknown arg --without-included-gettext compilers: Checking arg --enable-threads=posix compilers: Unknown arg --enable-threads=posix compilers: Checking arg --with-gxx-include-dir=/usr/include/c++/4.7 compilers: Unknown arg --with-gxx-include-dir=/usr/include/c++/4.7 compilers: Checking arg --libdir=/usr/lib compilers: Unknown arg --libdir=/usr/lib compilers: Checking arg --enable-nls compilers: Unknown arg --enable-nls compilers: Checking arg --with-sysroot=/ compilers: Unknown arg --with-sysroot=/ compilers: Checking arg --enable-clocale=gnu compilers: Unknown arg --enable-clocale=gnu compilers: Checking arg --enable-libstdcxx-debug compilers: Unknown arg --enable-libstdcxx-debug compilers: Checking arg --enable-libstdcxx-time=yes compilers: Unknown arg --enable-libstdcxx-time=yes compilers: Checking arg --enable-gnu-unique-object compilers: Unknown arg --enable-gnu-unique-object compilers: Checking arg --enable-plugin compilers: Unknown arg --enable-plugin compilers: Checking arg --with-system-zlib compilers: Unknown arg --with-system-zlib compilers: Checking arg --enable-objc-gc compilers: Unknown arg --enable-objc-gc compilers: Checking arg --with-cloog compilers: Unknown arg --with-cloog compilers: Checking arg --enable-cloog-backend=ppl compilers: Unknown arg --enable-cloog-backend=ppl compilers: Checking arg --disable-cloog-version-check compilers: Unknown arg --disable-cloog-version-check compilers: Checking arg --disable-ppl-version-check compilers: Unknown arg --disable-ppl-version-check compilers: Checking arg --enable-multiarch compilers: Unknown arg --enable-multiarch compilers: Checking arg --disable-werror compilers: Unknown arg --disable-werror compilers: Checking arg --with-arch-32=i686 compilers: Unknown arg --with-arch-32=i686 compilers: Checking arg --with-abi=m64 compilers: Unknown arg --with-abi=m64 compilers: Checking arg --with-multilib-list=m32,m64,mx32 compilers: Unknown arg --with-multilib-list=m32,m64,mx32 compilers: Checking arg --with-tune=generic compilers: Unknown arg --with-tune=generic compilers: Checking arg --enable-checking=release compilers: Unknown arg --enable-checking=release compilers: Checking arg --build=x86_64-linux-gnu compilers: Unknown arg --build=x86_64-linux-gnu compilers: Checking arg --host=x86_64-linux-gnu compilers: Unknown arg --host=x86_64-linux-gnu compilers: Checking arg --target=x86_64-linux-gnu compilers: Unknown arg --target=x86_64-linux-gnu compilers: Checking arg Thread compilers: Unknown arg Thread compilers: Checking arg model: compilers: Unknown arg model: compilers: Checking arg posix compilers: Unknown arg posix compilers: Checking arg gcc compilers: Unknown arg gcc compilers: Checking arg version compilers: Unknown arg version compilers: Checking arg 4.7.3 compilers: Unknown arg 4.7.3 compilers: Checking arg (Ubuntu/Linaro compilers: Unknown arg (Ubuntu/Linaro compilers: Checking arg 4.7.3-1ubuntu1) compilers: Unknown arg 4.7.3-1ubuntu1) compilers: Checking arg COMPILER_PATH=/usr/lib/gcc/x86_64-linux-gnu/4.7/:/usr/lib/gcc/x86_64-linux-gnu/4.7/:/usr/lib/gcc/x86_64-linux-gnu/:/usr/lib/gcc/x86_64-linux-gnu/4.7/:/usr/lib/gcc/x86_64-linux-gnu/ compilers: Skipping arg COMPILER_PATH=/usr/lib/gcc/x86_64-linux-gnu/4.7/:/usr/lib/gcc/x86_64-linux-gnu/4.7/:/usr/lib/gcc/x86_64-linux-gnu/:/usr/lib/gcc/x86_64-linux-gnu/4.7/:/usr/lib/gcc/x86_64-linux-gnu/ compilers: Checking arg LIBRARY_PATH=/usr/lib/gcc/x86_64-linux-gnu/4.7/:/usr/lib/gcc/x86_64-linux-gnu/4.7/../../../x86_64-linux-gnu/:/usr/lib/gcc/x86_64-linux-gnu/4.7/../../../../lib/:/lib/x86_64-linux-gnu/:/lib/../lib/:/usr/lib/x86_64-linux-gnu/:/usr/lib/../lib/:/usr/lib/gcc/x86_64-linux-gnu/4.7/../../../:/lib/:/usr/lib/ compilers: Skipping arg LIBRARY_PATH=/usr/lib/gcc/x86_64-linux-gnu/4.7/:/usr/lib/gcc/x86_64-linux-gnu/4.7/../../../x86_64-linux-gnu/:/usr/lib/gcc/x86_64-linux-gnu/4.7/../../../../lib/:/lib/x86_64-linux-gnu/:/lib/../lib/:/usr/lib/x86_64-linux-gnu/:/usr/lib/../lib/:/usr/lib/gcc/x86_64-linux-gnu/4.7/../../../:/lib/:/usr/lib/ compilers: Checking arg COLLECT_GCC_OPTIONS= compilers: Unknown arg COLLECT_GCC_OPTIONS= compilers: Checking arg /usr/lib/gcc/x86_64-linux-gnu/4.7/collect2 compilers: Unknown arg /usr/lib/gcc/x86_64-linux-gnu/4.7/collect2 compilers: Checking arg --sysroot=/ compilers: Unknown arg --sysroot=/ compilers: Checking arg --build-id compilers: Unknown arg --build-id compilers: Checking arg --eh-frame-hdr compilers: Unknown arg --eh-frame-hdr compilers: Checking arg -m compilers: Unknown arg -m compilers: Checking arg elf_x86_64 compilers: Unknown arg elf_x86_64 compilers: Checking arg --hash-style=gnu compilers: Unknown arg --hash-style=gnu compilers: Checking arg --as-needed compilers: Unknown arg --as-needed compilers: Checking arg -dynamic-linker compilers: Unknown arg -dynamic-linker compilers: Checking arg /lib64/ld-linux-x86-64.so.2 compilers: Unknown arg /lib64/ld-linux-x86-64.so.2 compilers: Checking arg -z compilers: Unknown arg -z compilers: Checking arg relro compilers: Unknown arg relro compilers: Checking arg -o compilers: Unknown arg -o compilers: Checking arg /tmp/petsc-U9YCMv/config.compilers/conftest compilers: Unknown arg /tmp/petsc-U9YCMv/config.compilers/conftest compilers: Checking arg /usr/lib/gcc/x86_64-linux-gnu/4.7/../../../x86_64-linux-gnu/crt1.o compilers: Unknown arg /usr/lib/gcc/x86_64-linux-gnu/4.7/../../../x86_64-linux-gnu/crt1.o compilers: Checking arg /usr/lib/gcc/x86_64-linux-gnu/4.7/../../../x86_64-linux-gnu/crti.o compilers: Unknown arg /usr/lib/gcc/x86_64-linux-gnu/4.7/../../../x86_64-linux-gnu/crti.o compilers: Checking arg /usr/lib/gcc/x86_64-linux-gnu/4.7/crtbegin.o compilers: Unknown arg /usr/lib/gcc/x86_64-linux-gnu/4.7/crtbegin.o compilers: Checking arg -L/home/hills/seska/packages/openmpi/lib compilers: Already in lflags so skipping: -L/home/hills/seska/packages/openmpi/lib compilers: Checking arg -L/home/hills/seska/packages/tau/x86_64/lib compilers: Already in lflags so skipping: -L/home/hills/seska/packages/tau/x86_64/lib compilers: Checking arg -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib compilers: Already in lflags so skipping: -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib compilers: Checking arg -L/home/hills/seska/packages/tau/x86_64/lib compilers: Already in lflags so skipping: -L/home/hills/seska/packages/tau/x86_64/lib compilers: Checking arg -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib compilers: Already in lflags so skipping: -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib compilers: Checking arg -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 compilers: Already in lflags so skipping: -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 compilers: Checking arg -L/home/hills/seska/packages/openmpi/lib compilers: Already in lflags so skipping: -L/home/hills/seska/packages/openmpi/lib compilers: Checking arg -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib compilers: Already in lflags so skipping: -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib compilers: Checking arg -L/usr/lib/gcc/x86_64-linux-gnu/4.7 compilers: Already in lflags so skipping: -L/usr/lib/gcc/x86_64-linux-gnu/4.7 compilers: Checking arg -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt compilers: Already in lflags so skipping: -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt compilers: Checking arg -L/home/hills/seska/packages/openmpi/lib compilers: Already in lflags so skipping: -L/home/hills/seska/packages/openmpi/lib compilers: Checking arg -L/home/hills/seska/packages/tau/x86_64/lib compilers: Already in lflags so skipping: -L/home/hills/seska/packages/tau/x86_64/lib compilers: Checking arg -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib compilers: Already in lflags so skipping: -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib compilers: Checking arg -L/home/hills/seska/packages/tau/x86_64/lib compilers: Already in lflags so skipping: -L/home/hills/seska/packages/tau/x86_64/lib compilers: Checking arg -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib compilers: Already in lflags so skipping: -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib compilers: Checking arg -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 compilers: Already in lflags so skipping: -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 compilers: Checking arg -L/home/hills/seska/packages/openmpi/lib compilers: Already in lflags so skipping: -L/home/hills/seska/packages/openmpi/lib compilers: Checking arg -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib compilers: Already in lflags so skipping: -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib compilers: Checking arg -L/usr/lib/gcc/x86_64-linux-gnu/4.7 compilers: Already in lflags so skipping: -L/usr/lib/gcc/x86_64-linux-gnu/4.7 compilers: Checking arg -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt compilers: Already in lflags so skipping: -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt compilers: Checking arg -L/usr/lib/gcc/x86_64-linux-gnu/4.7 compilers: Already in lflags so skipping: -L/usr/lib/gcc/x86_64-linux-gnu/4.7 compilers: Checking arg -L/usr/lib/x86_64-linux-gnu compilers: Already in lflags so skipping: -L/usr/lib/x86_64-linux-gnu compilers: Checking arg -L/lib/x86_64-linux-gnu compilers: Already in lflags so skipping: -L/lib/x86_64-linux-gnu compilers: Checking arg -L/usr/lib/x86_64-linux-gnu compilers: Already in lflags so skipping: -L/usr/lib/x86_64-linux-gnu compilers: Checking arg -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib compilers: Already in lflags so skipping: -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib compilers: Checking arg -L/usr/lib/gcc/x86_64-linux-gnu/4.7 compilers: Already in lflags so skipping: -L/usr/lib/gcc/x86_64-linux-gnu/4.7 compilers: Checking arg -L/usr/lib/gcc/x86_64-linux-gnu/4.7/../../../x86_64-linux-gnu compilers: Already in lflags so skipping: -L/usr/lib/x86_64-linux-gnu compilers: Checking arg -L/usr/lib/gcc/x86_64-linux-gnu/4.7/../../../../lib compilers: Checking arg -L/lib/x86_64-linux-gnu compilers: Already in lflags so skipping: -L/lib/x86_64-linux-gnu compilers: Checking arg -L/lib/../lib compilers: Checking arg -L/usr/lib/x86_64-linux-gnu compilers: Already in lflags so skipping: -L/usr/lib/x86_64-linux-gnu compilers: Checking arg -L/usr/lib/../lib compilers: Checking arg -L/usr/lib/gcc/x86_64-linux-gnu/4.7/../../.. compilers: Checking arg /tmp/petsc-U9YCMv/config.compilers/conftest.o compilers: Unknown arg /tmp/petsc-U9YCMv/config.compilers/conftest.o compilers: Checking arg -ldl compilers: Already in lflags: -ldl compilers: Checking arg -rpath compilers: Found -rpath library: /home/hills/seska/packages/openmpi/lib compilers: Checking arg -lmpi_f77 compilers: Already in lflags: -lmpi_f77 compilers: Checking arg -rpath compilers: Found -rpath library: /home/hills/seska/packages/tau/x86_64/lib compilers: Checking arg -lTauMpi-mpi-pdt compilers: Already in lflags: -lTauMpi-mpi-pdt compilers: Checking arg -rpath compilers: Found -rpath library: /home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib compilers: Checking arg -lmpich compilers: Already in lflags: -lmpich compilers: Checking arg -lopa compilers: Already in lflags: -lopa compilers: Checking arg -lmpl compilers: Already in lflags: -lmpl compilers: Checking arg -lrt compilers: Already in lflags: -lrt compilers: Checking arg -lpthread compilers: Already in lflags: -lpthread compilers: Checking arg -lmpi compilers: Already in lflags: -lmpi compilers: Checking arg -lmpi_cxx compilers: Already in lflags: -lmpi_cxx compilers: Checking arg -lmpi_f90 compilers: Already in lflags: -lmpi_f90 compilers: Checking arg -rpath compilers: Already in rpathflags so skipping: -rpath compilers: Checking arg -ltau-mpi-pdt compilers: Already in lflags: -ltau-mpi-pdt compilers: Checking arg -rpath compilers: Found -rpath library: /home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib compilers: Checking arg -rpath compilers: Found -rpath library: /home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 compilers: Checking arg -lbfd compilers: Already in lflags: -lbfd compilers: Checking arg -liberty compilers: Already in lflags: -liberty compilers: Checking arg -rpath compilers: Already in rpathflags so skipping: -rpath compilers: Checking arg -rpath compilers: Already in rpathflags so skipping: -rpath compilers: Checking arg -rpath compilers: Found -rpath library: /usr/lib/gcc/x86_64-linux-gnu/4.7 compilers: Checking arg -lstdc++ compilers: Already in lflags: -lstdc++ compilers: Checking arg -lgcc_s compilers: Already in lflags: -lgcc_s compilers: Checking arg -rpath compilers: Found -rpath library: /home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt compilers: Checking arg -rpath compilers: Already in rpathflags so skipping: -rpath compilers: Checking arg -rpath compilers: Already in rpathflags so skipping: -rpath compilers: Checking arg -rpath compilers: Already in rpathflags so skipping: -rpath compilers: Checking arg -rpath compilers: Already in rpathflags so skipping: -rpath compilers: Checking arg -rpath compilers: Already in rpathflags so skipping: -rpath compilers: Checking arg -rpath compilers: Already in rpathflags so skipping: -rpath compilers: Checking arg -rpath compilers: Already in rpathflags so skipping: -rpath compilers: Checking arg -rpath compilers: Already in rpathflags so skipping: -rpath compilers: Checking arg -rpath compilers: Already in rpathflags so skipping: -rpath compilers: Checking arg -rpath compilers: Already in rpathflags so skipping: -rpath compilers: Checking arg -rpath compilers: Already in rpathflags so skipping: -rpath compilers: Checking arg -rpath compilers: Found -rpath library: /usr/lib/x86_64-linux-gnu compilers: Checking arg -rpath compilers: Found -rpath library: /lib/x86_64-linux-gnu compilers: Checking arg -rpath compilers: Already in rpathflags so skipping: -rpath compilers: Checking arg -rpath compilers: Already in rpathflags so skipping: -rpath compilers: Checking arg -rpath compilers: Already in rpathflags so skipping: -rpath compilers: Checking arg -ldl compilers: Already in lflags: -ldl compilers: Checking arg -lmpichf90 compilers: Already in lflags: -lmpichf90 compilers: Checking arg -rpath compilers: Already in rpathflags so skipping: -rpath compilers: Checking arg -lmpich compilers: Already in lflags: -lmpich compilers: Checking arg -lopa compilers: Already in lflags: -lopa compilers: Checking arg -lmpl compilers: Already in lflags: -lmpl compilers: Checking arg -lrt compilers: Already in lflags: -lrt compilers: Checking arg -lpthread compilers: Already in lflags: -lpthread compilers: Checking arg -lgfortran compilers: Found library: -lgfortran compilers: Checking arg -lm compilers: Found library: -lm compilers: Checking arg -lgcc_s compilers: Already in lflags: -lgcc_s compilers: Checking arg -lgcc compilers: Found system library therefor skipping: -lgcc compilers: Checking arg -lquadmath compilers: Found library: -lquadmath compilers: Checking arg -lm compilers: Found library: -lm compilers: Checking arg -lgcc_s compilers: Already in lflags: -lgcc_s compilers: Checking arg -lgcc compilers: Found system library therefor skipping: -lgcc compilers: Checking arg -lc compilers: Found system library therefor skipping: -lc compilers: Checking arg -lgcc_s compilers: Already in lflags: -lgcc_s compilers: Checking arg -lgcc compilers: Found system library therefor skipping: -lgcc compilers: Checking arg /usr/lib/gcc/x86_64-linux-gnu/4.7/crtend.o compilers: Unknown arg /usr/lib/gcc/x86_64-linux-gnu/4.7/crtend.o compilers: Checking arg /usr/lib/gcc/x86_64-linux-gnu/4.7/../../../x86_64-linux-gnu/crtn.o compilers: Unknown arg /usr/lib/gcc/x86_64-linux-gnu/4.7/../../../x86_64-linux-gnu/crtn.o compilers: Libraries needed to link Fortran code with the C linker: ['-Wl,-rpath,/home/hills/seska/packages/openmpi/lib', '-L/home/hills/seska/packages/openmpi/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib', '-L/home/hills/seska/packages/tau/x86_64/lib', '-Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7', '-L/usr/lib/gcc/x86_64-linux-gnu/4.7', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-Wl,-rpath,/usr/lib/x86_64-linux-gnu', '-L/usr/lib/x86_64-linux-gnu', '-Wl,-rpath,/lib/x86_64-linux-gnu', '-L/lib/x86_64-linux-gnu', '-lmpichf90', '-lgfortran', '-lm', '-Wl,-rpath,/home/hills/seska/packages/openmpi/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib', '-Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-Wl,-rpath,/usr/lib/x86_64-linux-gnu', '-Wl,-rpath,/lib/x86_64-linux-gnu', '-lgfortran', '-lm', '-lquadmath', '-lm'] compilers: Libraries needed to link Fortran main with the C linker: [] compilers: Check that Fortran libraries can be used from C Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -fPIC -g /tmp/petsc-U9YCMv/config.setCompilers/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -fPIC -g /tmp/petsc-U9YCMv/config.setCompilers/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.setCompilers/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.setCompilers/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -fPIC -g /tmp/petsc-U9YCMv/config.setCompilers/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -fPIC -g /tmp/petsc-U9YCMv/config.setCompilers/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.setCompilers/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.setCompilers/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.setCompilers/conftest -fPIC -g /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.setCompilers/conftest -fPIC -g /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.setCompilers/conftest -fPIC -g /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -fPIC -g /tmp/petsc-U9YCMv/config.setCompilers/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -fPIC -g /tmp/petsc-U9YCMv/config.setCompilers/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.setCompilers/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.setCompilers/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.setCompilers/conftest -fPIC -g /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.setCompilers/conftest -fPIC -g /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.setCompilers/conftest -fPIC -g /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Executing: /tmp/petsc-U9YCMv/config.setCompilers/conftest sh: /tmp/petsc-U9YCMv/config.setCompilers/conftest Executing: /tmp/petsc-U9YCMv/config.setCompilers/conftest sh: Popping language C compilers: Check that Fortran libraries can be used from C++ Pushing language Cxx sh: mpicxx -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g -fPIC /tmp/petsc-U9YCMv/config.setCompilers/conftest.cc Executing: mpicxx -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g -fPIC /tmp/petsc-U9YCMv/config.setCompilers/conftest.cc sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } sh: mpicxx -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g -fPIC /tmp/petsc-U9YCMv/config.setCompilers/conftest.cc Executing: mpicxx -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g -fPIC /tmp/petsc-U9YCMv/config.setCompilers/conftest.cc sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language CXX Popping language CXX sh: mpicxx -o /tmp/petsc-U9YCMv/config.setCompilers/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: mpicxx -o /tmp/petsc-U9YCMv/config.setCompilers/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: sh: mpicxx -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g -fPIC /tmp/petsc-U9YCMv/config.setCompilers/conftest.cc Executing: mpicxx -c -o /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g -fPIC /tmp/petsc-U9YCMv/config.setCompilers/conftest.cc sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language CXX Popping language CXX sh: mpicxx -o /tmp/petsc-U9YCMv/config.setCompilers/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: mpicxx -o /tmp/petsc-U9YCMv/config.setCompilers/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g /tmp/petsc-U9YCMv/config.setCompilers/conftest.o -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Executing: /tmp/petsc-U9YCMv/config.setCompilers/conftest sh: /tmp/petsc-U9YCMv/config.setCompilers/conftest Executing: /tmp/petsc-U9YCMv/config.setCompilers/conftest sh: Popping language Cxx compilers: Fortran libraries can be used from C++ ================================================================================ TEST checkFortranLinkingCxx from config.compilers(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/compilers.py:1016) TESTING: checkFortranLinkingCxx from config.compilers(config/BuildSystem/config/compilers.py:1016) Check that Fortran can be linked against C++ Pushing language Cxx sh: mpicxx -c -o /tmp/petsc-U9YCMv/config.compilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g -fPIC /tmp/petsc-U9YCMv/config.compilers/conftest.cc Executing: mpicxx -c -o /tmp/petsc-U9YCMv/config.compilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g -fPIC /tmp/petsc-U9YCMv/config.compilers/conftest.cc sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" extern "C" void d1chk_(void); void foo(void){d1chk_();} Popping language Cxx Pushing language Cxx sh: mpicxx -c -o /tmp/petsc-U9YCMv/config.compilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g -fPIC /tmp/petsc-U9YCMv/config.compilers/conftest.cc Executing: mpicxx -c -o /tmp/petsc-U9YCMv/config.compilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g -fPIC /tmp/petsc-U9YCMv/config.compilers/conftest.cc sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" extern "C" void d1chk_(void); void d1chk_(void){return;} Popping language Cxx Pushing language FC sh: mpif90 -c -o /tmp/petsc-U9YCMv/config.compilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -fPIC -Wall -Wno-unused-variable -Wno-unused-dummy-argument -g /tmp/petsc-U9YCMv/config.compilers/conftest.F Executing: mpif90 -c -o /tmp/petsc-U9YCMv/config.compilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -fPIC -Wall -Wno-unused-variable -Wno-unused-dummy-argument -g /tmp/petsc-U9YCMv/config.compilers/conftest.F sh: Successful compile: Source: program main call d1chk() end Pushing language FC Popping language FC sh: mpif90 -o /tmp/petsc-U9YCMv/config.compilers/conftest -fPIC -Wall -Wno-unused-variable -Wno-unused-dummy-argument -g /tmp/petsc-U9YCMv/config.compilers/conftest.o /tmp/petsc-U9YCMv/config.compilers/cxxobj.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib /tmp/petsc-U9YCMv/config.compilers/confc.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: mpif90 -o /tmp/petsc-U9YCMv/config.compilers/conftest -fPIC -Wall -Wno-unused-variable -Wno-unused-dummy-argument -g /tmp/petsc-U9YCMv/config.compilers/conftest.o /tmp/petsc-U9YCMv/config.compilers/cxxobj.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib /tmp/petsc-U9YCMv/config.compilers/confc.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Popping language FC compilers: Fortran can link C++ functions ================================================================================ TEST checkFortran90 from config.compilers(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/compilers.py:1051) TESTING: checkFortran90 from config.compilers(config/BuildSystem/config/compilers.py:1051) Determine whether the Fortran compiler handles F90 Pushing language FC sh: mpif90 -c -o /tmp/petsc-U9YCMv/config.compilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -fPIC -Wall -Wno-unused-variable -Wno-unused-dummy-argument -g /tmp/petsc-U9YCMv/config.compilers/conftest.F Executing: mpif90 -c -o /tmp/petsc-U9YCMv/config.compilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -fPIC -Wall -Wno-unused-variable -Wno-unused-dummy-argument -g /tmp/petsc-U9YCMv/config.compilers/conftest.F sh: Successful compile: Source: program main INTEGER, PARAMETER :: int = SELECTED_INT_KIND(8) INTEGER (KIND=int) :: ierr ierr = 1 end Pushing language FC Popping language FC sh: mpif90 -o /tmp/petsc-U9YCMv/config.compilers/conftest -fPIC -Wall -Wno-unused-variable -Wno-unused-dummy-argument -g /tmp/petsc-U9YCMv/config.compilers/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: mpif90 -o /tmp/petsc-U9YCMv/config.compilers/conftest -fPIC -Wall -Wno-unused-variable -Wno-unused-dummy-argument -g /tmp/petsc-U9YCMv/config.compilers/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Defined "USING_F90" to "1" Fortran compiler supports F90 Popping language FC ================================================================================ TEST checkFortran2003 from config.compilers(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/compilers.py:1064) TESTING: checkFortran2003 from config.compilers(config/BuildSystem/config/compilers.py:1064) Determine whether the Fortran compiler handles F2003 Pushing language FC sh: mpif90 -c -o /tmp/petsc-U9YCMv/config.compilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -fPIC -Wall -Wno-unused-variable -Wno-unused-dummy-argument -g /tmp/petsc-U9YCMv/config.compilers/conftest.F Executing: mpif90 -c -o /tmp/petsc-U9YCMv/config.compilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -fPIC -Wall -Wno-unused-variable -Wno-unused-dummy-argument -g /tmp/petsc-U9YCMv/config.compilers/conftest.F sh: Successful compile: Source: program main use,intrinsic :: iso_c_binding Type(C_Ptr),Dimension(:),Pointer :: CArray character(kind=c_char),pointer :: nullc => null() character(kind=c_char,len=5),dimension(:),pointer::list1 allocate(list1(5)) CArray = (/(c_loc(list1(i)),i=1,5),c_loc(nullc)/) end Pushing language FC Popping language FC sh: mpif90 -o /tmp/petsc-U9YCMv/config.compilers/conftest -fPIC -Wall -Wno-unused-variable -Wno-unused-dummy-argument -g /tmp/petsc-U9YCMv/config.compilers/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: mpif90 -o /tmp/petsc-U9YCMv/config.compilers/conftest -fPIC -Wall -Wno-unused-variable -Wno-unused-dummy-argument -g /tmp/petsc-U9YCMv/config.compilers/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Defined "USING_F2003" to "1" Fortran compiler supports F2003 Popping language FC ================================================================================ TEST checkFortran90Array from config.compilers(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/compilers.py:1084) TESTING: checkFortran90Array from config.compilers(config/BuildSystem/config/compilers.py:1084) Check for F90 array interfaces sh: uname -s Executing: uname -s sh: Linux Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.compilers/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -fPIC -g /tmp/petsc-U9YCMv/config.compilers/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.compilers/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -fPIC -g /tmp/petsc-U9YCMv/config.compilers/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.compilers/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.compilers Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.compilers/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.compilers -o /tmp/petsc-U9YCMv/config.compilers/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include void f90arraytest_(void* a1, void* a2,void* a3, void* i) { printf("arrays [%p %p %p]\n",a1,a2,a3); fflush(stdout); return; } void f90ptrtest_(void* a1, void* a2,void* a3, void* i, void* p1 ,void* p2, void* p3) { printf("arrays [%p %p %p]\n",a1,a2,a3); if ((p1 == p3) && (p1 != p2)) { printf("pointers match! [%p %p] [%p]\n",p1,p3,p2); fflush(stdout); } else { printf("pointers do not match! [%p %p] [%p]\n",p1,p3,p2); fflush(stdout); abort(); } return; } Popping language C Pushing language FC sh: mpif90 -c -o /tmp/petsc-U9YCMv/config.compilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -fPIC -Wall -Wno-unused-variable -Wno-unused-dummy-argument -g /tmp/petsc-U9YCMv/config.compilers/conftest.F Executing: mpif90 -c -o /tmp/petsc-U9YCMv/config.compilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -fPIC -Wall -Wno-unused-variable -Wno-unused-dummy-argument -g /tmp/petsc-U9YCMv/config.compilers/conftest.F sh: Successful compile: Source: program main Interface Subroutine f90ptrtest(p1,p2,p3,i) integer, pointer :: p1(:,:) integer, pointer :: p2(:,:) integer, pointer :: p3(:,:) integer i End Subroutine End Interface integer, pointer :: ptr1(:,:),ptr2(:,:) integer, target :: array(6:8,9:21) integer in in = 25 ptr1 => array ptr2 => array call f90arraytest(ptr1,ptr2,ptr1,in) call f90ptrtest(ptr1,ptr2,ptr1,in) end Pushing language FC Popping language FC sh: mpif90 -o /tmp/petsc-U9YCMv/config.compilers/conftest -fPIC -Wall -Wno-unused-variable -Wno-unused-dummy-argument -g /tmp/petsc-U9YCMv/config.compilers/conftest.o /tmp/petsc-U9YCMv/config.compilers/fooobj.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: mpif90 -o /tmp/petsc-U9YCMv/config.compilers/conftest -fPIC -Wall -Wno-unused-variable -Wno-unused-dummy-argument -g /tmp/petsc-U9YCMv/config.compilers/conftest.o /tmp/petsc-U9YCMv/config.compilers/fooobj.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Possible ERROR while running linker: /home/hills/seska/packages/tau/x86_64/lib/libtau-mpi-pdt.a(TauUnify.o): In function `TauGetMpiRank': TauUnify.cpp:(.text+0x257): undefined reference to `ompi_mpi_comm_world' /home/hills/seska/packages/tau/x86_64/lib/libtau-mpi-pdt.a(TauUnify.o): In function `Tau_unify_generateSortMap(EventLister*)': TauUnify.cpp:(.text+0x4f0): undefined reference to `ompi_mpi_comm_world' /home/hills/seska/packages/tau/x86_64/lib/libtau-mpi-pdt.a(TauUnify.o): In function `Tau_unify_unifyEvents(EventLister*)': TauUnify.cpp:(.text+0x614): undefined reference to `ompi_mpi_comm_world' TauUnify.cpp:(.text+0x72d): undefined reference to `ompi_mpi_int' TauUnify.cpp:(.text+0x7c2): undefined reference to `ompi_mpi_char' TauUnify.cpp:(.text+0xb93): undefined reference to `ompi_mpi_char' TauUnify.cpp:(.text+0xd2f): undefined reference to `ompi_mpi_int' TauUnify.cpp:(.text+0xd4a): undefined reference to `ompi_mpi_int' /home/hills/seska/packages/tau/x86_64/lib/libtau-mpi-pdt.a(TauUnify.o): In function `MPI::Op::Init(void (*)(void const*, void*, int, MPI::Datatype const&), bool)': TauUnify.cpp:(.text._ZN3MPI2Op4InitEPFvPKvPviRKNS_8DatatypeEEb[_ZN3MPI2Op4InitEPFvPKvPviRKNS_8DatatypeEEb]+0x18): undefined reference to `ompi_mpi_cxx_op_intercept' TauUnify.cpp:(.text._ZN3MPI2Op4InitEPFvPKvPviRKNS_8DatatypeEEb[_ZN3MPI2Op4InitEPFvPKvPviRKNS_8DatatypeEEb]+0x40): undefined reference to `ompi_op_set_cxx_callback' /home/hills/seska/packages/tau/x86_64/lib/libtau-mpi-pdt.a(TauUnify.o): In function `MPI::Intracomm::Create(MPI::Group const&) const': TauUnify.cpp:(.text._ZNK3MPI9Intracomm6CreateERKNS_5GroupE[_ZNK3MPI9Intracomm6CreateERKNS_5GroupE]+0x34): undefined reference to `MPI::Comm::Comm()' TauUnify.cpp:(.text._ZNK3MPI9Intracomm6CreateERKNS_5GroupE[_ZNK3MPI9Intracomm6CreateERKNS_5GroupE]+0x62): undefined reference to `ompi_mpi_comm_null' /home/hills/seska/packages/tau/x86_64/lib/libtau-mpi-pdt.a(TauUnify.o): In function `MPI::Intracomm::Clone() const': TauUnify.cpp:(.text._ZNK3MPI9Intracomm5CloneEv[_ZNK3MPI9Intracomm5CloneEv]+0x37): undefined reference to `MPI::Comm::Comm()' TauUnify.cpp:(.text._ZNK3MPI9Intracomm5CloneEv[_ZNK3MPI9Intracomm5CloneEv]+0x65): undefined reference to `ompi_mpi_comm_null' /home/hills/seska/packages/tau/x86_64/lib/libtau-mpi-pdt.a(TauUnify.o): In function `MPI::Intercomm::Merge(bool) const': TauUnify.cpp:(.text._ZNK3MPI9Intercomm5MergeEb[_ZNK3MPI9Intercomm5MergeEb]+0x32): undefined reference to `MPI::Comm::Comm()' TauUnify.cpp:(.text._ZNK3MPI9Intercomm5MergeEb[_ZNK3MPI9Intercomm5MergeEb]+0x62): undefined reference to `ompi_mpi_comm_null' /home/hills/seska/packages/tau/x86_64/lib/libtau-mpi-pdt.a(TauUnify.o): In function `MPI::Intracomm::Split(int, int) const': TauUnify.cpp:(.text._ZNK3MPI9Intracomm5SplitEii[_ZNK3MPI9Intracomm5SplitEii]+0x33): undefined reference to `MPI::Comm::Comm()' TauUnify.cpp:(.text._ZNK3MPI9Intracomm5SplitEii[_ZNK3MPI9Intracomm5SplitEii]+0x63): undefined reference to `ompi_mpi_comm_null' /home/hills/seska/packages/tau/x86_64/lib/libtau-mpi-pdt.a(TauUnify.o): In function `MPI::Intracomm::Create_graph(int, int const*, int const*, bool) const': TauUnify.cpp:(.text._ZNK3MPI9Intracomm12Create_graphEiPKiS2_b[_ZNK3MPI9Intracomm12Create_graphEiPKiS2_b]+0x29): undefined reference to `MPI::Comm::Comm()' TauUnify.cpp:(.text._ZNK3MPI9Intracomm12Create_graphEiPKiS2_b[_ZNK3MPI9Intracomm12Create_graphEiPKiS2_b]+0x5e): undefined reference to `ompi_mpi_comm_null' /home/hills/seska/packages/tau/x86_64/lib/libtau-mpi-pdt.a(TauUnify.o): In function `MPI::Cartcomm::Clone() const': TauUnify.cpp:(.text._ZNK3MPI8Cartcomm5CloneEv[_ZNK3MPI8Cartcomm5CloneEv]+0x25): undefined reference to `MPI::Comm::Comm()' TauUnify.cpp:(.text._ZNK3MPI8Cartcomm5CloneEv[_ZNK3MPI8Cartcomm5CloneEv]+0x58): undefined reference to `ompi_mpi_comm_null' /home/hills/seska/packages/tau/x86_64/lib/libtau-mpi-pdt.a(TauUnify.o): In function `MPI::Cartcomm::Sub(bool const*) const': TauUnify.cpp:(.text._ZNK3MPI8Cartcomm3SubEPKb[_ZNK3MPI8Cartcomm3SubEPKb]+0x7b): undefined reference to `MPI::Comm::Comm()' TauUnify.cpp:(.text._ZNK3MPI8Cartcomm3SubEPKb[_ZNK3MPI8Cartcomm3SubEPKb]+0xb2): undefined reference to `ompi_mpi_comm_null' /home/hills/seska/packages/tau/x86_64/lib/libtau-mpi-pdt.a(TauUnify.o): In function `MPI::Intracomm::Create_cart(int, int const*, bool const*, bool) const': TauUnify.cpp:(.text._ZNK3MPI9Intracomm11Create_cartEiPKiPKbb[_ZNK3MPI9Intracomm11Create_cartEiPKiPKbb]+0x8e): undefined reference to `MPI::Comm::Comm()' TauUnify.cpp:(.text._ZNK3MPI9Intracomm11Create_cartEiPKiPKbb[_ZNK3MPI9Intracomm11Create_cartEiPKiPKbb]+0xc3): undefined reference to `ompi_mpi_comm_null' /home/hills/seska/packages/tau/x86_64/lib/libtau-mpi-pdt.a(TauUnify.o): In function `MPI::Graphcomm::Clone() const': TauUnify.cpp:(.text._ZNK3MPI9Graphcomm5CloneEv[_ZNK3MPI9Graphcomm5CloneEv]+0x25): undefined reference to `MPI::Comm::Comm()' TauUnify.cpp:(.text._ZNK3MPI9Graphcomm5CloneEv[_ZNK3MPI9Graphcomm5CloneEv]+0x58): undefined reference to `ompi_mpi_comm_null' /home/hills/seska/packages/tau/x86_64/lib/libtau-mpi-pdt.a(TauUnify.o):(.data.rel.ro._ZTVN3MPI8DatatypeE[_ZTVN3MPI8DatatypeE]+0x78): undefined reference to `MPI::Datatype::Free()' /home/hills/seska/packages/tau/x86_64/lib/libtau-mpi-pdt.a(TauUnify.o):(.data.rel.ro._ZTVN3MPI3WinE[_ZTVN3MPI3WinE]+0x48): undefined reference to `MPI::Win::Free()' collect2: error: ld returned 1 exit status output: ret = 256 error message = {/home/hills/seska/packages/tau/x86_64/lib/libtau-mpi-pdt.a(TauUnify.o): In function `TauGetMpiRank': TauUnify.cpp:(.text+0x257): undefined reference to `ompi_mpi_comm_world' /home/hills/seska/packages/tau/x86_64/lib/libtau-mpi-pdt.a(TauUnify.o): In function `Tau_unify_generateSortMap(EventLister*)': TauUnify.cpp:(.text+0x4f0): undefined reference to `ompi_mpi_comm_world' /home/hills/seska/packages/tau/x86_64/lib/libtau-mpi-pdt.a(TauUnify.o): In function `Tau_unify_unifyEvents(EventLister*)': TauUnify.cpp:(.text+0x614): undefined reference to `ompi_mpi_comm_world' TauUnify.cpp:(.text+0x72d): undefined reference to `ompi_mpi_int' TauUnify.cpp:(.text+0x7c2): undefined reference to `ompi_mpi_char' TauUnify.cpp:(.text+0xb93): undefined reference to `ompi_mpi_char' TauUnify.cpp:(.text+0xd2f): undefined reference to `ompi_mpi_int' TauUnify.cpp:(.text+0xd4a): undefined reference to `ompi_mpi_int' /home/hills/seska/packages/tau/x86_64/lib/libtau-mpi-pdt.a(TauUnify.o): In function `MPI::Op::Init(void (*)(void const*, void*, int, MPI::Datatype const&), bool)': TauUnify.cpp:(.text._ZN3MPI2Op4InitEPFvPKvPviRKNS_8DatatypeEEb[_ZN3MPI2Op4InitEPFvPKvPviRKNS_8DatatypeEEb]+0x18): undefined reference to `ompi_mpi_cxx_op_intercept' TauUnify.cpp:(.text._ZN3MPI2Op4InitEPFvPKvPviRKNS_8DatatypeEEb[_ZN3MPI2Op4InitEPFvPKvPviRKNS_8DatatypeEEb]+0x40): undefined reference to `ompi_op_set_cxx_callback' /home/hills/seska/packages/tau/x86_64/lib/libtau-mpi-pdt.a(TauUnify.o): In function `MPI::Intracomm::Create(MPI::Group const&) const': TauUnify.cpp:(.text._ZNK3MPI9Intracomm6CreateERKNS_5GroupE[_ZNK3MPI9Intracomm6CreateERKNS_5GroupE]+0x34): undefined reference to `MPI::Comm::Comm()' TauUnify.cpp:(.text._ZNK3MPI9Intracomm6CreateERKNS_5GroupE[_ZNK3MPI9Intracomm6CreateERKNS_5GroupE]+0x62): undefined reference to `ompi_mpi_comm_null' /home/hills/seska/packages/tau/x86_64/lib/libtau-mpi-pdt.a(TauUnify.o): In function `MPI::Intracomm::Clone() const': TauUnify.cpp:(.text._ZNK3MPI9Intracomm5CloneEv[_ZNK3MPI9Intracomm5CloneEv]+0x37): undefined reference to `MPI::Comm::Comm()' TauUnify.cpp:(.text._ZNK3MPI9Intracomm5CloneEv[_ZNK3MPI9Intracomm5CloneEv]+0x65): undefined reference to `ompi_mpi_comm_null' /home/hills/seska/packages/tau/x86_64/lib/libtau-mpi-pdt.a(TauUnify.o): In function `MPI::Intercomm::Merge(bool) const': TauUnify.cpp:(.text._ZNK3MPI9Intercomm5MergeEb[_ZNK3MPI9Intercomm5MergeEb]+0x32): undefined reference to `MPI::Comm::Comm()' TauUnify.cpp:(.text._ZNK3MPI9Intercomm5MergeEb[_ZNK3MPI9Intercomm5MergeEb]+0x62): undefined reference to `ompi_mpi_comm_null' /home/hills/seska/packages/tau/x86_64/lib/libtau-mpi-pdt.a(TauUnify.o): In function `MPI::Intracomm::Split(int, int) const': TauUnify.cpp:(.text._ZNK3MPI9Intracomm5SplitEii[_ZNK3MPI9Intracomm5SplitEii]+0x33): undefined reference to `MPI::Comm::Comm()' TauUnify.cpp:(.text._ZNK3MPI9Intracomm5SplitEii[_ZNK3MPI9Intracomm5SplitEii]+0x63): undefined reference to `ompi_mpi_comm_null' /home/hills/seska/packages/tau/x86_64/lib/libtau-mpi-pdt.a(TauUnify.o): In function `MPI::Intracomm::Create_graph(int, int const*, int const*, bool) const': TauUnify.cpp:(.text._ZNK3MPI9Intracomm12Create_graphEiPKiS2_b[_ZNK3MPI9Intracomm12Create_graphEiPKiS2_b]+0x29): undefined reference to `MPI::Comm::Comm()' TauUnify.cpp:(.text._ZNK3MPI9Intracomm12Create_graphEiPKiS2_b[_ZNK3MPI9Intracomm12Create_graphEiPKiS2_b]+0x5e): undefined reference to `ompi_mpi_comm_null' /home/hills/seska/packages/tau/x86_64/lib/libtau-mpi-pdt.a(TauUnify.o): In function `MPI::Cartcomm::Clone() const': TauUnify.cpp:(.text._ZNK3MPI8Cartcomm5CloneEv[_ZNK3MPI8Cartcomm5CloneEv]+0x25): undefined reference to `MPI::Comm::Comm()' TauUnify.cpp:(.text._ZNK3MPI8Cartcomm5CloneEv[_ZNK3MPI8Cartcomm5CloneEv]+0x58): undefined reference to `ompi_mpi_comm_null' /home/hills/seska/packages/tau/x86_64/lib/libtau-mpi-pdt.a(TauUnify.o): In function `MPI::Cartcomm::Sub(bool const*) const': TauUnify.cpp:(.text._ZNK3MPI8Cartcomm3SubEPKb[_ZNK3MPI8Cartcomm3SubEPKb]+0x7b): undefined reference to `MPI::Comm::Comm()' TauUnify.cpp:(.text._ZNK3MPI8Cartcomm3SubEPKb[_ZNK3MPI8Cartcomm3SubEPKb]+0xb2): undefined reference to `ompi_mpi_comm_null' /home/hills/seska/packages/tau/x86_64/lib/libtau-mpi-pdt.a(TauUnify.o): In function `MPI::Intracomm::Create_cart(int, int const*, bool const*, bool) const': TauUnify.cpp:(.text._ZNK3MPI9Intracomm11Create_cartEiPKiPKbb[_ZNK3MPI9Intracomm11Create_cartEiPKiPKbb]+0x8e): undefined reference to `MPI::Comm::Comm()' TauUnify.cpp:(.text._ZNK3MPI9Intracomm11Create_cartEiPKiPKbb[_ZNK3MPI9Intracomm11Create_cartEiPKiPKbb]+0xc3): undefined reference to `ompi_mpi_comm_null' /home/hills/seska/packages/tau/x86_64/lib/libtau-mpi-pdt.a(TauUnify.o): In function `MPI::Graphcomm::Clone() const': TauUnify.cpp:(.text._ZNK3MPI9Graphcomm5CloneEv[_ZNK3MPI9Graphcomm5CloneEv]+0x25): undefined reference to `MPI::Comm::Comm()' TauUnify.cpp:(.text._ZNK3MPI9Graphcomm5CloneEv[_ZNK3MPI9Graphcomm5CloneEv]+0x58): undefined reference to `ompi_mpi_comm_null' /home/hills/seska/packages/tau/x86_64/lib/libtau-mpi-pdt.a(TauUnify.o):(.data.rel.ro._ZTVN3MPI8DatatypeE[_ZTVN3MPI8DatatypeE]+0x78): undefined reference to `MPI::Datatype::Free()' /home/hills/seska/packages/tau/x86_64/lib/libtau-mpi-pdt.a(TauUnify.o):(.data.rel.ro._ZTVN3MPI3WinE[_ZTVN3MPI3WinE]+0x48): undefined reference to `MPI::Win::Free()' collect2: error: ld returned 1 exit status } Pushing language FC Popping language FC in mpif90 -o /tmp/petsc-U9YCMv/config.compilers/conftest -fPIC -Wall -Wno-unused-variable -Wno-unused-dummy-argument -g /tmp/petsc-U9YCMv/config.compilers/conftest.o /tmp/petsc-U9YCMv/config.compilers/fooobj.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Source: program main Interface Subroutine f90ptrtest(p1,p2,p3,i) integer, pointer :: p1(:,:) integer, pointer :: p2(:,:) integer, pointer :: p3(:,:) integer i End Subroutine End Interface integer, pointer :: ptr1(:,:),ptr2(:,:) integer, target :: array(6:8,9:21) integer in in = 25 ptr1 => array ptr2 => array call f90arraytest(ptr1,ptr2,ptr1,in) call f90ptrtest(ptr1,ptr2,ptr1,in) end Popping language FC compilers: F90 uses a single argument for array pointers ================================================================================ TEST checkFortranModuleInclude from config.compilers(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/compilers.py:1171) TESTING: checkFortranModuleInclude from config.compilers(config/BuildSystem/config/compilers.py:1171) Figures out what flag is used to specify the include path for Fortran modules Pushing language FC sh: mpif90 -c -o /tmp/petsc-U9YCMv/config.compilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -fPIC -Wall -Wno-unused-variable -Wno-unused-dummy-argument -g /tmp/petsc-U9YCMv/config.compilers/conftest.F Executing: mpif90 -c -o /tmp/petsc-U9YCMv/config.compilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -fPIC -Wall -Wno-unused-variable -Wno-unused-dummy-argument -g /tmp/petsc-U9YCMv/config.compilers/conftest.F sh: Successful compile: Source: module configtest integer testint parameter (testint = 42) end module configtest Pushing language FC sh: mpif90 -c -o /tmp/petsc-U9YCMv/config.compilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.compilers/confdir -fPIC -Wall -Wno-unused-variable -Wno-unused-dummy-argument -g /tmp/petsc-U9YCMv/config.compilers/conftest.F Executing: mpif90 -c -o /tmp/petsc-U9YCMv/config.compilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.compilers/confdir -fPIC -Wall -Wno-unused-variable -Wno-unused-dummy-argument -g /tmp/petsc-U9YCMv/config.compilers/conftest.F sh: Successful compile: Source: program main use configtest write(*,*) testint end Pushing language FC Popping language FC sh: mpif90 -o /tmp/petsc-U9YCMv/config.compilers/conftest -I/tmp/petsc-U9YCMv/config.compilers/confdir -fPIC -Wall -Wno-unused-variable -Wno-unused-dummy-argument -g /tmp/petsc-U9YCMv/config.compilers/conftest.o /tmp/petsc-U9YCMv/config.compilers/configtest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: mpif90 -o /tmp/petsc-U9YCMv/config.compilers/conftest -I/tmp/petsc-U9YCMv/config.compilers/confdir -fPIC -Wall -Wno-unused-variable -Wno-unused-dummy-argument -g /tmp/petsc-U9YCMv/config.compilers/conftest.o /tmp/petsc-U9YCMv/config.compilers/configtest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: compilers: Fortran module include flag -I found Popping language FC ================================================================================ TEST checkFortranModuleOutput from config.compilers(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/compilers.py:1237) TESTING: checkFortranModuleOutput from config.compilers(config/BuildSystem/config/compilers.py:1237) Figures out what flag is used to specify the include path for Fortran modules Pushing language FC sh: mpif90 -c -o /tmp/petsc-U9YCMv/config.compilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -module /tmp/petsc-U9YCMv/config.compilers/confdir -fPIC -Wall -Wno-unused-variable -Wno-unused-dummy-argument -g /tmp/petsc-U9YCMv/config.compilers/conftest.F Executing: mpif90 -c -o /tmp/petsc-U9YCMv/config.compilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -module /tmp/petsc-U9YCMv/config.compilers/confdir -fPIC -Wall -Wno-unused-variable -Wno-unused-dummy-argument -g /tmp/petsc-U9YCMv/config.compilers/conftest.F sh: Possible ERROR while running compiler: ret = 256 error message = {gfortran: error: unrecognized command line option ‘-module’ } Source: module configtest integer testint parameter (testint = 42) end module configtest compilers: Fortran module output flag -module compile failed sh: mpif90 -c -o /tmp/petsc-U9YCMv/config.compilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -module:/tmp/petsc-U9YCMv/config.compilers/confdir -fPIC -Wall -Wno-unused-variable -Wno-unused-dummy-argument -g /tmp/petsc-U9YCMv/config.compilers/conftest.F Executing: mpif90 -c -o /tmp/petsc-U9YCMv/config.compilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -module:/tmp/petsc-U9YCMv/config.compilers/confdir -fPIC -Wall -Wno-unused-variable -Wno-unused-dummy-argument -g /tmp/petsc-U9YCMv/config.compilers/conftest.F sh: Possible ERROR while running compiler: ret = 256 error message = {gfortran: error: unrecognized command line option ‘-module:/tmp/petsc-U9YCMv/config.compilers/confdir’ } Source: module configtest integer testint parameter (testint = 42) end module configtest compilers: Fortran module output flag -module: compile failed sh: mpif90 -c -o /tmp/petsc-U9YCMv/config.compilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -fmod=/tmp/petsc-U9YCMv/config.compilers/confdir -fPIC -Wall -Wno-unused-variable -Wno-unused-dummy-argument -g /tmp/petsc-U9YCMv/config.compilers/conftest.F Executing: mpif90 -c -o /tmp/petsc-U9YCMv/config.compilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -fmod=/tmp/petsc-U9YCMv/config.compilers/confdir -fPIC -Wall -Wno-unused-variable -Wno-unused-dummy-argument -g /tmp/petsc-U9YCMv/config.compilers/conftest.F sh: Possible ERROR while running compiler: ret = 256 error message = {gfortran: error: unrecognized command line option ‘-fmod=/tmp/petsc-U9YCMv/config.compilers/confdir’ } Source: module configtest integer testint parameter (testint = 42) end module configtest compilers: Fortran module output flag -fmod= compile failed sh: mpif90 -c -o /tmp/petsc-U9YCMv/config.compilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -J/tmp/petsc-U9YCMv/config.compilers/confdir -fPIC -Wall -Wno-unused-variable -Wno-unused-dummy-argument -g /tmp/petsc-U9YCMv/config.compilers/conftest.F Executing: mpif90 -c -o /tmp/petsc-U9YCMv/config.compilers/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -J/tmp/petsc-U9YCMv/config.compilers/confdir -fPIC -Wall -Wno-unused-variable -Wno-unused-dummy-argument -g /tmp/petsc-U9YCMv/config.compilers/conftest.F sh: Successful compile: Source: module configtest integer testint parameter (testint = 42) end module configtest compilers: Fortran module output flag -J found Popping language FC ================================================================================ TEST setupFrameworkCompilers from config.compilers(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/compilers.py:1364) TESTING: setupFrameworkCompilers from config.compilers(config/BuildSystem/config/compilers.py:1364) ================================================================================ TEST configureFortranCPP from PETSc.utilities.fortranCPP(/home/hills/seska-hills/packages/petsc-3.4.2/config/PETSc/utilities/fortranCPP.py:27) TESTING: configureFortranCPP from PETSc.utilities.fortranCPP(config/PETSc/utilities/fortranCPP.py:27) Handle case where Fortran cannot preprocess properly Defined make rule ".f.o .f90.o .f95.o" with dependencies "" and code ['${PETSC_MAKE_STOP_ON_ERROR}${FC} -c ${FFLAGS} ${FC_FLAGS} -o $@ $<'] Defined make rule ".f.a" with dependencies "" and code ['${PETSC_MAKE_STOP_ON_ERROR}${FC} -c ${FFLAGS} ${FC_FLAGS} $<', '-${AR} ${AR_FLAGS} ${LIBNAME} $*.o', '-${RM} $*.o'] Defined make rule ".F.o .F90.o .F95.o" with dependencies "" and code ['${PETSC_MAKE_STOP_ON_ERROR}${FC} -c ${FFLAGS} ${FC_FLAGS} ${FCPPFLAGS} -o $@ $<'] Defined make rule ".F.a" with dependencies "" and code ['${PETSC_MAKE_STOP_ON_ERROR}${FC} -c ${FFLAGS} ${FC_FLAGS} ${FCPPFLAGS} $<', '-${AR} ${AR_FLAGS} ${LIBNAME} $*.o', '-${RM} $*.o'] ================================================================================ TEST checkStdC from config.headers(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/headers.py:105) TESTING: checkStdC from config.headers(config/BuildSystem/config/headers.py:105) sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.headers/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -fPIC -g /tmp/petsc-U9YCMv/config.headers/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.headers/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -fPIC -g /tmp/petsc-U9YCMv/config.headers/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.headers/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.headers Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.headers/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.headers -o /tmp/petsc-U9YCMv/config.headers/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include #include #include int main() { ; return 0; } sh: tau_cc.sh -E -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.headers /tmp/petsc-U9YCMv/config.headers/conftest.c Executing: tau_cc.sh -E -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.headers /tmp/petsc-U9YCMv/config.headers/conftest.c sh: # 1 "/tmp/petsc-U9YCMv/config.headers/conftest.c" # 1 "" # 1 "/tmp/petsc-U9YCMv/config.headers/conftest.c" # 1 "/tmp/petsc-U9YCMv/config.headers/confdefs.h" 1 # 2 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 # 1 "/tmp/petsc-U9YCMv/config.headers/conffix.h" 1 # 3 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 # 1 "/usr/include/string.h" 1 3 4 # 25 "/usr/include/string.h" 3 4 # 1 "/usr/include/features.h" 1 3 4 # 341 "/usr/include/features.h" 3 4 # 1 "/usr/include/stdc-predef.h" 1 3 4 # 30 "/usr/include/stdc-predef.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/predefs.h" 1 3 4 # 31 "/usr/include/stdc-predef.h" 2 3 4 # 342 "/usr/include/features.h" 2 3 4 # 371 "/usr/include/features.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/sys/cdefs.h" 1 3 4 # 385 "/usr/include/x86_64-linux-gnu/sys/cdefs.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/wordsize.h" 1 3 4 # 386 "/usr/include/x86_64-linux-gnu/sys/cdefs.h" 2 3 4 # 372 "/usr/include/features.h" 2 3 4 # 395 "/usr/include/features.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/gnu/stubs.h" 1 3 4 # 10 "/usr/include/x86_64-linux-gnu/gnu/stubs.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/gnu/stubs-64.h" 1 3 4 # 11 "/usr/include/x86_64-linux-gnu/gnu/stubs.h" 2 3 4 # 396 "/usr/include/features.h" 2 3 4 # 26 "/usr/include/string.h" 2 3 4 # 1 "/usr/lib/gcc/x86_64-linux-gnu/4.7/include/stddef.h" 1 3 4 # 213 "/usr/lib/gcc/x86_64-linux-gnu/4.7/include/stddef.h" 3 4 typedef long unsigned int size_t; # 33 "/usr/include/string.h" 2 3 4 extern void *memcpy (void *__restrict __dest, const void *__restrict __src, size_t __n) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))); extern void *memmove (void *__dest, const void *__src, size_t __n) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))); extern void *memccpy (void *__restrict __dest, const void *__restrict __src, int __c, size_t __n) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))); extern void *memset (void *__s, int __c, size_t __n) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern int memcmp (const void *__s1, const void *__s2, size_t __n) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1, 2))); # 92 "/usr/include/string.h" 3 4 extern void *memchr (const void *__s, int __c, size_t __n) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1))); # 123 "/usr/include/string.h" 3 4 extern char *strcpy (char *__restrict __dest, const char *__restrict __src) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))); extern char *strncpy (char *__restrict __dest, const char *__restrict __src, size_t __n) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))); extern char *strcat (char *__restrict __dest, const char *__restrict __src) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))); extern char *strncat (char *__restrict __dest, const char *__restrict __src, size_t __n) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))); extern int strcmp (const char *__s1, const char *__s2) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1, 2))); extern int strncmp (const char *__s1, const char *__s2, size_t __n) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1, 2))); extern int strcoll (const char *__s1, const char *__s2) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1, 2))); extern size_t strxfrm (char *__restrict __dest, const char *__restrict __src, size_t __n) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (2))); # 1 "/usr/include/xlocale.h" 1 3 4 # 27 "/usr/include/xlocale.h" 3 4 typedef struct __locale_struct { struct __locale_data *__locales[13]; const unsigned short int *__ctype_b; const int *__ctype_tolower; const int *__ctype_toupper; const char *__names[13]; } *__locale_t; typedef __locale_t locale_t; # 160 "/usr/include/string.h" 2 3 4 extern int strcoll_l (const char *__s1, const char *__s2, __locale_t __l) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1, 2, 3))); extern size_t strxfrm_l (char *__dest, const char *__src, size_t __n, __locale_t __l) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (2, 4))); extern char *strdup (const char *__s) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__malloc__)) __attribute__ ((__nonnull__ (1))); extern char *strndup (const char *__string, size_t __n) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__malloc__)) __attribute__ ((__nonnull__ (1))); # 207 "/usr/include/string.h" 3 4 # 232 "/usr/include/string.h" 3 4 extern char *strchr (const char *__s, int __c) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1))); # 259 "/usr/include/string.h" 3 4 extern char *strrchr (const char *__s, int __c) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1))); # 278 "/usr/include/string.h" 3 4 extern size_t strcspn (const char *__s, const char *__reject) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1, 2))); extern size_t strspn (const char *__s, const char *__accept) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1, 2))); # 311 "/usr/include/string.h" 3 4 extern char *strpbrk (const char *__s, const char *__accept) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1, 2))); # 338 "/usr/include/string.h" 3 4 extern char *strstr (const char *__haystack, const char *__needle) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1, 2))); extern char *strtok (char *__restrict __s, const char *__restrict __delim) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (2))); extern char *__strtok_r (char *__restrict __s, const char *__restrict __delim, char **__restrict __save_ptr) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (2, 3))); extern char *strtok_r (char *__restrict __s, const char *__restrict __delim, char **__restrict __save_ptr) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (2, 3))); # 393 "/usr/include/string.h" 3 4 extern size_t strlen (const char *__s) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1))); extern size_t strnlen (const char *__string, size_t __maxlen) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1))); extern char *strerror (int __errnum) __attribute__ ((__nothrow__ , __leaf__)); # 423 "/usr/include/string.h" 3 4 extern int strerror_r (int __errnum, char *__buf, size_t __buflen) __asm__ ("" "__xpg_strerror_r") __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (2))); # 441 "/usr/include/string.h" 3 4 extern char *strerror_l (int __errnum, __locale_t __l) __attribute__ ((__nothrow__ , __leaf__)); extern void __bzero (void *__s, size_t __n) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern void bcopy (const void *__src, void *__dest, size_t __n) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))); extern void bzero (void *__s, size_t __n) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern int bcmp (const void *__s1, const void *__s2, size_t __n) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1, 2))); # 485 "/usr/include/string.h" 3 4 extern char *index (const char *__s, int __c) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1))); # 513 "/usr/include/string.h" 3 4 extern char *rindex (const char *__s, int __c) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1))); extern int ffs (int __i) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); # 532 "/usr/include/string.h" 3 4 extern int strcasecmp (const char *__s1, const char *__s2) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1, 2))); extern int strncasecmp (const char *__s1, const char *__s2, size_t __n) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1, 2))); # 555 "/usr/include/string.h" 3 4 extern char *strsep (char **__restrict __stringp, const char *__restrict __delim) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))); extern char *strsignal (int __sig) __attribute__ ((__nothrow__ , __leaf__)); extern char *__stpcpy (char *__restrict __dest, const char *__restrict __src) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))); extern char *stpcpy (char *__restrict __dest, const char *__restrict __src) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))); extern char *__stpncpy (char *__restrict __dest, const char *__restrict __src, size_t __n) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))); extern char *stpncpy (char *__restrict __dest, const char *__restrict __src, size_t __n) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))); # 642 "/usr/include/string.h" 3 4 # 3 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 sh: tau_cc.sh -E -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.headers /tmp/petsc-U9YCMv/config.headers/conftest.c Executing: tau_cc.sh -E -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.headers /tmp/petsc-U9YCMv/config.headers/conftest.c sh: # 1 "/tmp/petsc-U9YCMv/config.headers/conftest.c" # 1 "" # 1 "/tmp/petsc-U9YCMv/config.headers/conftest.c" # 1 "/tmp/petsc-U9YCMv/config.headers/confdefs.h" 1 # 2 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 # 1 "/tmp/petsc-U9YCMv/config.headers/conffix.h" 1 # 3 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 # 1 "/usr/include/stdlib.h" 1 3 4 # 24 "/usr/include/stdlib.h" 3 4 # 1 "/usr/include/features.h" 1 3 4 # 341 "/usr/include/features.h" 3 4 # 1 "/usr/include/stdc-predef.h" 1 3 4 # 30 "/usr/include/stdc-predef.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/predefs.h" 1 3 4 # 31 "/usr/include/stdc-predef.h" 2 3 4 # 342 "/usr/include/features.h" 2 3 4 # 371 "/usr/include/features.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/sys/cdefs.h" 1 3 4 # 385 "/usr/include/x86_64-linux-gnu/sys/cdefs.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/wordsize.h" 1 3 4 # 386 "/usr/include/x86_64-linux-gnu/sys/cdefs.h" 2 3 4 # 372 "/usr/include/features.h" 2 3 4 # 395 "/usr/include/features.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/gnu/stubs.h" 1 3 4 # 10 "/usr/include/x86_64-linux-gnu/gnu/stubs.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/gnu/stubs-64.h" 1 3 4 # 11 "/usr/include/x86_64-linux-gnu/gnu/stubs.h" 2 3 4 # 396 "/usr/include/features.h" 2 3 4 # 25 "/usr/include/stdlib.h" 2 3 4 # 1 "/usr/lib/gcc/x86_64-linux-gnu/4.7/include/stddef.h" 1 3 4 # 213 "/usr/lib/gcc/x86_64-linux-gnu/4.7/include/stddef.h" 3 4 typedef long unsigned int size_t; # 325 "/usr/lib/gcc/x86_64-linux-gnu/4.7/include/stddef.h" 3 4 typedef int wchar_t; # 33 "/usr/include/stdlib.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/waitflags.h" 1 3 4 # 42 "/usr/include/stdlib.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/waitstatus.h" 1 3 4 # 64 "/usr/include/x86_64-linux-gnu/bits/waitstatus.h" 3 4 # 1 "/usr/include/endian.h" 1 3 4 # 36 "/usr/include/endian.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/endian.h" 1 3 4 # 37 "/usr/include/endian.h" 2 3 4 # 60 "/usr/include/endian.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/byteswap.h" 1 3 4 # 27 "/usr/include/x86_64-linux-gnu/bits/byteswap.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/types.h" 1 3 4 # 27 "/usr/include/x86_64-linux-gnu/bits/types.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/wordsize.h" 1 3 4 # 28 "/usr/include/x86_64-linux-gnu/bits/types.h" 2 3 4 typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; # 130 "/usr/include/x86_64-linux-gnu/bits/types.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/typesizes.h" 1 3 4 # 131 "/usr/include/x86_64-linux-gnu/bits/types.h" 2 3 4 typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned long int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef long int __suseconds_t; typedef int __daddr_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __fsword_t; typedef long int __ssize_t; typedef long int __syscall_slong_t; typedef unsigned long int __syscall_ulong_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; # 28 "/usr/include/x86_64-linux-gnu/bits/byteswap.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/wordsize.h" 1 3 4 # 29 "/usr/include/x86_64-linux-gnu/bits/byteswap.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/byteswap-16.h" 1 3 4 # 36 "/usr/include/x86_64-linux-gnu/bits/byteswap.h" 2 3 4 # 44 "/usr/include/x86_64-linux-gnu/bits/byteswap.h" 3 4 static __inline unsigned int __bswap_32 (unsigned int __bsx) { return __builtin_bswap32 (__bsx); } # 108 "/usr/include/x86_64-linux-gnu/bits/byteswap.h" 3 4 static __inline __uint64_t __bswap_64 (__uint64_t __bsx) { return __builtin_bswap64 (__bsx); } # 61 "/usr/include/endian.h" 2 3 4 # 65 "/usr/include/x86_64-linux-gnu/bits/waitstatus.h" 2 3 4 union wait { int w_status; struct { unsigned int __w_termsig:7; unsigned int __w_coredump:1; unsigned int __w_retcode:8; unsigned int:16; } __wait_terminated; struct { unsigned int __w_stopval:8; unsigned int __w_stopsig:8; unsigned int:16; } __wait_stopped; }; # 43 "/usr/include/stdlib.h" 2 3 4 # 67 "/usr/include/stdlib.h" 3 4 typedef union { union wait *__uptr; int *__iptr; } __WAIT_STATUS __attribute__ ((__transparent_union__)); # 95 "/usr/include/stdlib.h" 3 4 typedef struct { int quot; int rem; } div_t; typedef struct { long int quot; long int rem; } ldiv_t; __extension__ typedef struct { long long int quot; long long int rem; } lldiv_t; # 139 "/usr/include/stdlib.h" 3 4 extern size_t __ctype_get_mb_cur_max (void) __attribute__ ((__nothrow__ , __leaf__)) ; extern double atof (const char *__nptr) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1))) ; extern int atoi (const char *__nptr) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1))) ; extern long int atol (const char *__nptr) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1))) ; __extension__ extern long long int atoll (const char *__nptr) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1))) ; extern double strtod (const char *__restrict __nptr, char **__restrict __endptr) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern float strtof (const char *__restrict __nptr, char **__restrict __endptr) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern long double strtold (const char *__restrict __nptr, char **__restrict __endptr) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern long int strtol (const char *__restrict __nptr, char **__restrict __endptr, int __base) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern unsigned long int strtoul (const char *__restrict __nptr, char **__restrict __endptr, int __base) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); __extension__ extern long long int strtoq (const char *__restrict __nptr, char **__restrict __endptr, int __base) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); __extension__ extern unsigned long long int strtouq (const char *__restrict __nptr, char **__restrict __endptr, int __base) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); __extension__ extern long long int strtoll (const char *__restrict __nptr, char **__restrict __endptr, int __base) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); __extension__ extern unsigned long long int strtoull (const char *__restrict __nptr, char **__restrict __endptr, int __base) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); # 305 "/usr/include/stdlib.h" 3 4 extern char *l64a (long int __n) __attribute__ ((__nothrow__ , __leaf__)) ; extern long int a64l (const char *__s) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1))) ; # 1 "/usr/include/x86_64-linux-gnu/sys/types.h" 1 3 4 # 27 "/usr/include/x86_64-linux-gnu/sys/types.h" 3 4 typedef __u_char u_char; typedef __u_short u_short; typedef __u_int u_int; typedef __u_long u_long; typedef __quad_t quad_t; typedef __u_quad_t u_quad_t; typedef __fsid_t fsid_t; typedef __loff_t loff_t; typedef __ino_t ino_t; # 60 "/usr/include/x86_64-linux-gnu/sys/types.h" 3 4 typedef __dev_t dev_t; typedef __gid_t gid_t; typedef __mode_t mode_t; typedef __nlink_t nlink_t; typedef __uid_t uid_t; typedef __off_t off_t; # 98 "/usr/include/x86_64-linux-gnu/sys/types.h" 3 4 typedef __pid_t pid_t; typedef __id_t id_t; typedef __ssize_t ssize_t; typedef __daddr_t daddr_t; typedef __caddr_t caddr_t; typedef __key_t key_t; # 132 "/usr/include/x86_64-linux-gnu/sys/types.h" 3 4 # 1 "/usr/include/time.h" 1 3 4 # 57 "/usr/include/time.h" 3 4 typedef __clock_t clock_t; # 73 "/usr/include/time.h" 3 4 typedef __time_t time_t; # 91 "/usr/include/time.h" 3 4 typedef __clockid_t clockid_t; # 103 "/usr/include/time.h" 3 4 typedef __timer_t timer_t; # 133 "/usr/include/x86_64-linux-gnu/sys/types.h" 2 3 4 # 146 "/usr/include/x86_64-linux-gnu/sys/types.h" 3 4 # 1 "/usr/lib/gcc/x86_64-linux-gnu/4.7/include/stddef.h" 1 3 4 # 147 "/usr/include/x86_64-linux-gnu/sys/types.h" 2 3 4 typedef unsigned long int ulong; typedef unsigned short int ushort; typedef unsigned int uint; # 194 "/usr/include/x86_64-linux-gnu/sys/types.h" 3 4 typedef int int8_t __attribute__ ((__mode__ (__QI__))); typedef int int16_t __attribute__ ((__mode__ (__HI__))); typedef int int32_t __attribute__ ((__mode__ (__SI__))); typedef int int64_t __attribute__ ((__mode__ (__DI__))); typedef unsigned int u_int8_t __attribute__ ((__mode__ (__QI__))); typedef unsigned int u_int16_t __attribute__ ((__mode__ (__HI__))); typedef unsigned int u_int32_t __attribute__ ((__mode__ (__SI__))); typedef unsigned int u_int64_t __attribute__ ((__mode__ (__DI__))); typedef int register_t __attribute__ ((__mode__ (__word__))); # 219 "/usr/include/x86_64-linux-gnu/sys/types.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/sys/select.h" 1 3 4 # 30 "/usr/include/x86_64-linux-gnu/sys/select.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/select.h" 1 3 4 # 22 "/usr/include/x86_64-linux-gnu/bits/select.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/wordsize.h" 1 3 4 # 23 "/usr/include/x86_64-linux-gnu/bits/select.h" 2 3 4 # 31 "/usr/include/x86_64-linux-gnu/sys/select.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/sigset.h" 1 3 4 # 23 "/usr/include/x86_64-linux-gnu/bits/sigset.h" 3 4 typedef int __sig_atomic_t; typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; # 34 "/usr/include/x86_64-linux-gnu/sys/select.h" 2 3 4 typedef __sigset_t sigset_t; # 1 "/usr/include/time.h" 1 3 4 # 120 "/usr/include/time.h" 3 4 struct timespec { __time_t tv_sec; __syscall_slong_t tv_nsec; }; # 44 "/usr/include/x86_64-linux-gnu/sys/select.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/time.h" 1 3 4 # 30 "/usr/include/x86_64-linux-gnu/bits/time.h" 3 4 struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; # 46 "/usr/include/x86_64-linux-gnu/sys/select.h" 2 3 4 typedef __suseconds_t suseconds_t; typedef long int __fd_mask; # 64 "/usr/include/x86_64-linux-gnu/sys/select.h" 3 4 typedef struct { __fd_mask __fds_bits[1024 / (8 * (int) sizeof (__fd_mask))]; } fd_set; typedef __fd_mask fd_mask; # 96 "/usr/include/x86_64-linux-gnu/sys/select.h" 3 4 # 106 "/usr/include/x86_64-linux-gnu/sys/select.h" 3 4 extern int select (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, struct timeval *__restrict __timeout); # 118 "/usr/include/x86_64-linux-gnu/sys/select.h" 3 4 extern int pselect (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, const struct timespec *__restrict __timeout, const __sigset_t *__restrict __sigmask); # 131 "/usr/include/x86_64-linux-gnu/sys/select.h" 3 4 # 220 "/usr/include/x86_64-linux-gnu/sys/types.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/sys/sysmacros.h" 1 3 4 # 29 "/usr/include/x86_64-linux-gnu/sys/sysmacros.h" 3 4 __extension__ extern unsigned int gnu_dev_major (unsigned long long int __dev) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); __extension__ extern unsigned int gnu_dev_minor (unsigned long long int __dev) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); __extension__ extern unsigned long long int gnu_dev_makedev (unsigned int __major, unsigned int __minor) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); # 63 "/usr/include/x86_64-linux-gnu/sys/sysmacros.h" 3 4 # 223 "/usr/include/x86_64-linux-gnu/sys/types.h" 2 3 4 typedef __blksize_t blksize_t; typedef __blkcnt_t blkcnt_t; typedef __fsblkcnt_t fsblkcnt_t; typedef __fsfilcnt_t fsfilcnt_t; # 270 "/usr/include/x86_64-linux-gnu/sys/types.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/pthreadtypes.h" 1 3 4 # 21 "/usr/include/x86_64-linux-gnu/bits/pthreadtypes.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/wordsize.h" 1 3 4 # 22 "/usr/include/x86_64-linux-gnu/bits/pthreadtypes.h" 2 3 4 # 60 "/usr/include/x86_64-linux-gnu/bits/pthreadtypes.h" 3 4 typedef unsigned long int pthread_t; union pthread_attr_t { char __size[56]; long int __align; }; typedef union pthread_attr_t pthread_attr_t; typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; # 90 "/usr/include/x86_64-linux-gnu/bits/pthreadtypes.h" 3 4 typedef union { struct __pthread_mutex_s { int __lock; unsigned int __count; int __owner; unsigned int __nusers; int __kind; int __spins; __pthread_list_t __list; # 115 "/usr/include/x86_64-linux-gnu/bits/pthreadtypes.h" 3 4 } __data; char __size[40]; long int __align; } pthread_mutex_t; typedef union { char __size[4]; int __align; } pthread_mutexattr_t; typedef union { struct { int __lock; unsigned int __futex; __extension__ unsigned long long int __total_seq; __extension__ unsigned long long int __wakeup_seq; __extension__ unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; __extension__ long long int __align; } pthread_cond_t; typedef union { char __size[4]; int __align; } pthread_condattr_t; typedef unsigned int pthread_key_t; typedef int pthread_once_t; typedef union { struct { int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; unsigned int __flags; } __data; # 202 "/usr/include/x86_64-linux-gnu/bits/pthreadtypes.h" 3 4 char __size[56]; long int __align; } pthread_rwlock_t; typedef union { char __size[8]; long int __align; } pthread_rwlockattr_t; typedef volatile int pthread_spinlock_t; typedef union { char __size[32]; long int __align; } pthread_barrier_t; typedef union { char __size[4]; int __align; } pthread_barrierattr_t; # 271 "/usr/include/x86_64-linux-gnu/sys/types.h" 2 3 4 # 315 "/usr/include/stdlib.h" 2 3 4 extern long int random (void) __attribute__ ((__nothrow__ , __leaf__)); extern void srandom (unsigned int __seed) __attribute__ ((__nothrow__ , __leaf__)); extern char *initstate (unsigned int __seed, char *__statebuf, size_t __statelen) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (2))); extern char *setstate (char *__statebuf) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); struct random_data { int32_t *fptr; int32_t *rptr; int32_t *state; int rand_type; int rand_deg; int rand_sep; int32_t *end_ptr; }; extern int random_r (struct random_data *__restrict __buf, int32_t *__restrict __result) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))); extern int srandom_r (unsigned int __seed, struct random_data *__buf) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (2))); extern int initstate_r (unsigned int __seed, char *__restrict __statebuf, size_t __statelen, struct random_data *__restrict __buf) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (2, 4))); extern int setstate_r (char *__restrict __statebuf, struct random_data *__restrict __buf) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))); extern int rand (void) __attribute__ ((__nothrow__ , __leaf__)); extern void srand (unsigned int __seed) __attribute__ ((__nothrow__ , __leaf__)); extern int rand_r (unsigned int *__seed) __attribute__ ((__nothrow__ , __leaf__)); extern double drand48 (void) __attribute__ ((__nothrow__ , __leaf__)); extern double erand48 (unsigned short int __xsubi[3]) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern long int lrand48 (void) __attribute__ ((__nothrow__ , __leaf__)); extern long int nrand48 (unsigned short int __xsubi[3]) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern long int mrand48 (void) __attribute__ ((__nothrow__ , __leaf__)); extern long int jrand48 (unsigned short int __xsubi[3]) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern void srand48 (long int __seedval) __attribute__ ((__nothrow__ , __leaf__)); extern unsigned short int *seed48 (unsigned short int __seed16v[3]) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern void lcong48 (unsigned short int __param[7]) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); struct drand48_data { unsigned short int __x[3]; unsigned short int __old_x[3]; unsigned short int __c; unsigned short int __init; unsigned long long int __a; }; extern int drand48_r (struct drand48_data *__restrict __buffer, double *__restrict __result) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))); extern int erand48_r (unsigned short int __xsubi[3], struct drand48_data *__restrict __buffer, double *__restrict __result) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))); extern int lrand48_r (struct drand48_data *__restrict __buffer, long int *__restrict __result) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))); extern int nrand48_r (unsigned short int __xsubi[3], struct drand48_data *__restrict __buffer, long int *__restrict __result) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))); extern int mrand48_r (struct drand48_data *__restrict __buffer, long int *__restrict __result) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))); extern int jrand48_r (unsigned short int __xsubi[3], struct drand48_data *__restrict __buffer, long int *__restrict __result) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))); extern int srand48_r (long int __seedval, struct drand48_data *__buffer) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (2))); extern int seed48_r (unsigned short int __seed16v[3], struct drand48_data *__buffer) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))); extern int lcong48_r (unsigned short int __param[7], struct drand48_data *__buffer) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))); extern void *malloc (size_t __size) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__malloc__)) ; extern void *calloc (size_t __nmemb, size_t __size) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__malloc__)) ; extern void *realloc (void *__ptr, size_t __size) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__warn_unused_result__)); extern void free (void *__ptr) __attribute__ ((__nothrow__ , __leaf__)); extern void cfree (void *__ptr) __attribute__ ((__nothrow__ , __leaf__)); # 1 "/usr/include/alloca.h" 1 3 4 # 24 "/usr/include/alloca.h" 3 4 # 1 "/usr/lib/gcc/x86_64-linux-gnu/4.7/include/stddef.h" 1 3 4 # 25 "/usr/include/alloca.h" 2 3 4 extern void *alloca (size_t __size) __attribute__ ((__nothrow__ , __leaf__)); # 492 "/usr/include/stdlib.h" 2 3 4 extern void *valloc (size_t __size) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__malloc__)) ; extern int posix_memalign (void **__memptr, size_t __alignment, size_t __size) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))) ; # 512 "/usr/include/stdlib.h" 3 4 extern void abort (void) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__noreturn__)); extern int atexit (void (*__func) (void)) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); # 529 "/usr/include/stdlib.h" 3 4 extern int on_exit (void (*__func) (int __status, void *__arg), void *__arg) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern void exit (int __status) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__noreturn__)); extern void _Exit (int __status) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__noreturn__)); extern char *getenv (const char *__name) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))) ; # 577 "/usr/include/stdlib.h" 3 4 extern int putenv (char *__string) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern int setenv (const char *__name, const char *__value, int __replace) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (2))); extern int unsetenv (const char *__name) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern int clearenv (void) __attribute__ ((__nothrow__ , __leaf__)); # 605 "/usr/include/stdlib.h" 3 4 extern char *mktemp (char *__template) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); # 619 "/usr/include/stdlib.h" 3 4 extern int mkstemp (char *__template) __attribute__ ((__nonnull__ (1))) ; # 641 "/usr/include/stdlib.h" 3 4 extern int mkstemps (char *__template, int __suffixlen) __attribute__ ((__nonnull__ (1))) ; # 662 "/usr/include/stdlib.h" 3 4 extern char *mkdtemp (char *__template) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))) ; # 711 "/usr/include/stdlib.h" 3 4 extern int system (const char *__command) ; # 733 "/usr/include/stdlib.h" 3 4 extern char *realpath (const char *__restrict __name, char *__restrict __resolved) __attribute__ ((__nothrow__ , __leaf__)) ; typedef int (*__compar_fn_t) (const void *, const void *); # 751 "/usr/include/stdlib.h" 3 4 extern void *bsearch (const void *__key, const void *__base, size_t __nmemb, size_t __size, __compar_fn_t __compar) __attribute__ ((__nonnull__ (1, 2, 5))) ; extern void qsort (void *__base, size_t __nmemb, size_t __size, __compar_fn_t __compar) __attribute__ ((__nonnull__ (1, 4))); # 770 "/usr/include/stdlib.h" 3 4 extern int abs (int __x) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)) ; extern long int labs (long int __x) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)) ; __extension__ extern long long int llabs (long long int __x) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)) ; extern div_t div (int __numer, int __denom) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)) ; extern ldiv_t ldiv (long int __numer, long int __denom) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)) ; __extension__ extern lldiv_t lldiv (long long int __numer, long long int __denom) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)) ; # 807 "/usr/include/stdlib.h" 3 4 extern char *ecvt (double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (3, 4))) ; extern char *fcvt (double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (3, 4))) ; extern char *gcvt (double __value, int __ndigit, char *__buf) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (3))) ; extern char *qecvt (long double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (3, 4))) ; extern char *qfcvt (long double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (3, 4))) ; extern char *qgcvt (long double __value, int __ndigit, char *__buf) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (3))) ; extern int ecvt_r (double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign, char *__restrict __buf, size_t __len) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (3, 4, 5))); extern int fcvt_r (double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign, char *__restrict __buf, size_t __len) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (3, 4, 5))); extern int qecvt_r (long double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign, char *__restrict __buf, size_t __len) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (3, 4, 5))); extern int qfcvt_r (long double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign, char *__restrict __buf, size_t __len) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (3, 4, 5))); extern int mblen (const char *__s, size_t __n) __attribute__ ((__nothrow__ , __leaf__)) ; extern int mbtowc (wchar_t *__restrict __pwc, const char *__restrict __s, size_t __n) __attribute__ ((__nothrow__ , __leaf__)) ; extern int wctomb (char *__s, wchar_t __wchar) __attribute__ ((__nothrow__ , __leaf__)) ; extern size_t mbstowcs (wchar_t *__restrict __pwcs, const char *__restrict __s, size_t __n) __attribute__ ((__nothrow__ , __leaf__)); extern size_t wcstombs (char *__restrict __s, const wchar_t *__restrict __pwcs, size_t __n) __attribute__ ((__nothrow__ , __leaf__)); extern int rpmatch (const char *__response) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))) ; # 895 "/usr/include/stdlib.h" 3 4 extern int getsubopt (char **__restrict __optionp, char *const *__restrict __tokens, char **__restrict __valuep) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2, 3))) ; # 947 "/usr/include/stdlib.h" 3 4 extern int getloadavg (double __loadavg[], int __nelem) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); # 1 "/usr/include/x86_64-linux-gnu/bits/stdlib-float.h" 1 3 4 # 952 "/usr/include/stdlib.h" 2 3 4 # 964 "/usr/include/stdlib.h" 3 4 # 3 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.headers/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -fPIC -g /tmp/petsc-U9YCMv/config.headers/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.headers/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -fPIC -g /tmp/petsc-U9YCMv/config.headers/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.headers/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.headers Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.headers/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.headers -o /tmp/petsc-U9YCMv/config.headers/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include #define ISLOWER(c) ('a' <= (c) && (c) <= 'z') #define TOUPPER(c) (ISLOWER(c) ? 'A' + ((c) - 'a') : (c)) #define XOR(e, f) (((e) && !(f)) || (!(e) && (f))) int main() { int i; for(i = 0; i < 256; i++) if (XOR(islower(i), ISLOWER(i)) || toupper(i) != TOUPPER(i)) exit(2); exit(0); ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.headers/conftest -fPIC -g /tmp/petsc-U9YCMv/config.headers/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.headers/conftest -fPIC -g /tmp/petsc-U9YCMv/config.headers/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.headers/conftest -fPIC -g /tmp/petsc-U9YCMv/config.headers/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Executing: /tmp/petsc-U9YCMv/config.headers/conftest sh: /tmp/petsc-U9YCMv/config.headers/conftest Executing: /tmp/petsc-U9YCMv/config.headers/conftest sh: Defined "STDC_HEADERS" to "1" ================================================================================ TEST checkStat from config.headers(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/headers.py:138) TESTING: checkStat from config.headers(config/BuildSystem/config/headers.py:138) Checks whether stat file-mode macros are broken, and defines STAT_MACROS_BROKEN if they are sh: tau_cc.sh -E -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.headers /tmp/petsc-U9YCMv/config.headers/conftest.c Executing: tau_cc.sh -E -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.headers /tmp/petsc-U9YCMv/config.headers/conftest.c sh: # 1 "/tmp/petsc-U9YCMv/config.headers/conftest.c" # 1 "" # 1 "/tmp/petsc-U9YCMv/config.headers/conftest.c" # 1 "/tmp/petsc-U9YCMv/config.headers/confdefs.h" 1 # 2 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 # 1 "/tmp/petsc-U9YCMv/config.headers/conffix.h" 1 # 3 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 # 1 "/usr/include/x86_64-linux-gnu/sys/types.h" 1 3 4 # 25 "/usr/include/x86_64-linux-gnu/sys/types.h" 3 4 # 1 "/usr/include/features.h" 1 3 4 # 341 "/usr/include/features.h" 3 4 # 1 "/usr/include/stdc-predef.h" 1 3 4 # 30 "/usr/include/stdc-predef.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/predefs.h" 1 3 4 # 31 "/usr/include/stdc-predef.h" 2 3 4 # 342 "/usr/include/features.h" 2 3 4 # 371 "/usr/include/features.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/sys/cdefs.h" 1 3 4 # 385 "/usr/include/x86_64-linux-gnu/sys/cdefs.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/wordsize.h" 1 3 4 # 386 "/usr/include/x86_64-linux-gnu/sys/cdefs.h" 2 3 4 # 372 "/usr/include/features.h" 2 3 4 # 395 "/usr/include/features.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/gnu/stubs.h" 1 3 4 # 10 "/usr/include/x86_64-linux-gnu/gnu/stubs.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/gnu/stubs-64.h" 1 3 4 # 11 "/usr/include/x86_64-linux-gnu/gnu/stubs.h" 2 3 4 # 396 "/usr/include/features.h" 2 3 4 # 26 "/usr/include/x86_64-linux-gnu/sys/types.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/types.h" 1 3 4 # 27 "/usr/include/x86_64-linux-gnu/bits/types.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/wordsize.h" 1 3 4 # 28 "/usr/include/x86_64-linux-gnu/bits/types.h" 2 3 4 typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; # 130 "/usr/include/x86_64-linux-gnu/bits/types.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/typesizes.h" 1 3 4 # 131 "/usr/include/x86_64-linux-gnu/bits/types.h" 2 3 4 typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned long int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef long int __suseconds_t; typedef int __daddr_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __fsword_t; typedef long int __ssize_t; typedef long int __syscall_slong_t; typedef unsigned long int __syscall_ulong_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; # 30 "/usr/include/x86_64-linux-gnu/sys/types.h" 2 3 4 typedef __u_char u_char; typedef __u_short u_short; typedef __u_int u_int; typedef __u_long u_long; typedef __quad_t quad_t; typedef __u_quad_t u_quad_t; typedef __fsid_t fsid_t; typedef __loff_t loff_t; typedef __ino_t ino_t; # 60 "/usr/include/x86_64-linux-gnu/sys/types.h" 3 4 typedef __dev_t dev_t; typedef __gid_t gid_t; typedef __mode_t mode_t; typedef __nlink_t nlink_t; typedef __uid_t uid_t; typedef __off_t off_t; # 98 "/usr/include/x86_64-linux-gnu/sys/types.h" 3 4 typedef __pid_t pid_t; typedef __id_t id_t; typedef __ssize_t ssize_t; typedef __daddr_t daddr_t; typedef __caddr_t caddr_t; typedef __key_t key_t; # 132 "/usr/include/x86_64-linux-gnu/sys/types.h" 3 4 # 1 "/usr/include/time.h" 1 3 4 # 57 "/usr/include/time.h" 3 4 typedef __clock_t clock_t; # 73 "/usr/include/time.h" 3 4 typedef __time_t time_t; # 91 "/usr/include/time.h" 3 4 typedef __clockid_t clockid_t; # 103 "/usr/include/time.h" 3 4 typedef __timer_t timer_t; # 133 "/usr/include/x86_64-linux-gnu/sys/types.h" 2 3 4 # 146 "/usr/include/x86_64-linux-gnu/sys/types.h" 3 4 # 1 "/usr/lib/gcc/x86_64-linux-gnu/4.7/include/stddef.h" 1 3 4 # 213 "/usr/lib/gcc/x86_64-linux-gnu/4.7/include/stddef.h" 3 4 typedef long unsigned int size_t; # 147 "/usr/include/x86_64-linux-gnu/sys/types.h" 2 3 4 typedef unsigned long int ulong; typedef unsigned short int ushort; typedef unsigned int uint; # 194 "/usr/include/x86_64-linux-gnu/sys/types.h" 3 4 typedef int int8_t __attribute__ ((__mode__ (__QI__))); typedef int int16_t __attribute__ ((__mode__ (__HI__))); typedef int int32_t __attribute__ ((__mode__ (__SI__))); typedef int int64_t __attribute__ ((__mode__ (__DI__))); typedef unsigned int u_int8_t __attribute__ ((__mode__ (__QI__))); typedef unsigned int u_int16_t __attribute__ ((__mode__ (__HI__))); typedef unsigned int u_int32_t __attribute__ ((__mode__ (__SI__))); typedef unsigned int u_int64_t __attribute__ ((__mode__ (__DI__))); typedef int register_t __attribute__ ((__mode__ (__word__))); # 216 "/usr/include/x86_64-linux-gnu/sys/types.h" 3 4 # 1 "/usr/include/endian.h" 1 3 4 # 36 "/usr/include/endian.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/endian.h" 1 3 4 # 37 "/usr/include/endian.h" 2 3 4 # 60 "/usr/include/endian.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/byteswap.h" 1 3 4 # 28 "/usr/include/x86_64-linux-gnu/bits/byteswap.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/wordsize.h" 1 3 4 # 29 "/usr/include/x86_64-linux-gnu/bits/byteswap.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/byteswap-16.h" 1 3 4 # 36 "/usr/include/x86_64-linux-gnu/bits/byteswap.h" 2 3 4 # 44 "/usr/include/x86_64-linux-gnu/bits/byteswap.h" 3 4 static __inline unsigned int __bswap_32 (unsigned int __bsx) { return __builtin_bswap32 (__bsx); } # 108 "/usr/include/x86_64-linux-gnu/bits/byteswap.h" 3 4 static __inline __uint64_t __bswap_64 (__uint64_t __bsx) { return __builtin_bswap64 (__bsx); } # 61 "/usr/include/endian.h" 2 3 4 # 217 "/usr/include/x86_64-linux-gnu/sys/types.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/sys/select.h" 1 3 4 # 30 "/usr/include/x86_64-linux-gnu/sys/select.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/select.h" 1 3 4 # 22 "/usr/include/x86_64-linux-gnu/bits/select.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/wordsize.h" 1 3 4 # 23 "/usr/include/x86_64-linux-gnu/bits/select.h" 2 3 4 # 31 "/usr/include/x86_64-linux-gnu/sys/select.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/sigset.h" 1 3 4 # 23 "/usr/include/x86_64-linux-gnu/bits/sigset.h" 3 4 typedef int __sig_atomic_t; typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; # 34 "/usr/include/x86_64-linux-gnu/sys/select.h" 2 3 4 typedef __sigset_t sigset_t; # 1 "/usr/include/time.h" 1 3 4 # 120 "/usr/include/time.h" 3 4 struct timespec { __time_t tv_sec; __syscall_slong_t tv_nsec; }; # 44 "/usr/include/x86_64-linux-gnu/sys/select.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/time.h" 1 3 4 # 30 "/usr/include/x86_64-linux-gnu/bits/time.h" 3 4 struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; # 46 "/usr/include/x86_64-linux-gnu/sys/select.h" 2 3 4 typedef __suseconds_t suseconds_t; typedef long int __fd_mask; # 64 "/usr/include/x86_64-linux-gnu/sys/select.h" 3 4 typedef struct { __fd_mask __fds_bits[1024 / (8 * (int) sizeof (__fd_mask))]; } fd_set; typedef __fd_mask fd_mask; # 96 "/usr/include/x86_64-linux-gnu/sys/select.h" 3 4 # 106 "/usr/include/x86_64-linux-gnu/sys/select.h" 3 4 extern int select (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, struct timeval *__restrict __timeout); # 118 "/usr/include/x86_64-linux-gnu/sys/select.h" 3 4 extern int pselect (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, const struct timespec *__restrict __timeout, const __sigset_t *__restrict __sigmask); # 131 "/usr/include/x86_64-linux-gnu/sys/select.h" 3 4 # 220 "/usr/include/x86_64-linux-gnu/sys/types.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/sys/sysmacros.h" 1 3 4 # 29 "/usr/include/x86_64-linux-gnu/sys/sysmacros.h" 3 4 __extension__ extern unsigned int gnu_dev_major (unsigned long long int __dev) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); __extension__ extern unsigned int gnu_dev_minor (unsigned long long int __dev) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); __extension__ extern unsigned long long int gnu_dev_makedev (unsigned int __major, unsigned int __minor) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); # 63 "/usr/include/x86_64-linux-gnu/sys/sysmacros.h" 3 4 # 223 "/usr/include/x86_64-linux-gnu/sys/types.h" 2 3 4 typedef __blksize_t blksize_t; typedef __blkcnt_t blkcnt_t; typedef __fsblkcnt_t fsblkcnt_t; typedef __fsfilcnt_t fsfilcnt_t; # 270 "/usr/include/x86_64-linux-gnu/sys/types.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/pthreadtypes.h" 1 3 4 # 21 "/usr/include/x86_64-linux-gnu/bits/pthreadtypes.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/wordsize.h" 1 3 4 # 22 "/usr/include/x86_64-linux-gnu/bits/pthreadtypes.h" 2 3 4 # 60 "/usr/include/x86_64-linux-gnu/bits/pthreadtypes.h" 3 4 typedef unsigned long int pthread_t; union pthread_attr_t { char __size[56]; long int __align; }; typedef union pthread_attr_t pthread_attr_t; typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; # 90 "/usr/include/x86_64-linux-gnu/bits/pthreadtypes.h" 3 4 typedef union { struct __pthread_mutex_s { int __lock; unsigned int __count; int __owner; unsigned int __nusers; int __kind; int __spins; __pthread_list_t __list; # 115 "/usr/include/x86_64-linux-gnu/bits/pthreadtypes.h" 3 4 } __data; char __size[40]; long int __align; } pthread_mutex_t; typedef union { char __size[4]; int __align; } pthread_mutexattr_t; typedef union { struct { int __lock; unsigned int __futex; __extension__ unsigned long long int __total_seq; __extension__ unsigned long long int __wakeup_seq; __extension__ unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; __extension__ long long int __align; } pthread_cond_t; typedef union { char __size[4]; int __align; } pthread_condattr_t; typedef unsigned int pthread_key_t; typedef int pthread_once_t; typedef union { struct { int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; unsigned int __flags; } __data; # 202 "/usr/include/x86_64-linux-gnu/bits/pthreadtypes.h" 3 4 char __size[56]; long int __align; } pthread_rwlock_t; typedef union { char __size[8]; long int __align; } pthread_rwlockattr_t; typedef volatile int pthread_spinlock_t; typedef union { char __size[32]; long int __align; } pthread_barrier_t; typedef union { char __size[4]; int __align; } pthread_barrierattr_t; # 271 "/usr/include/x86_64-linux-gnu/sys/types.h" 2 3 4 # 5 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 # 1 "/usr/include/x86_64-linux-gnu/sys/stat.h" 1 3 4 # 38 "/usr/include/x86_64-linux-gnu/sys/stat.h" 3 4 # 1 "/usr/include/time.h" 1 3 4 # 39 "/usr/include/x86_64-linux-gnu/sys/stat.h" 2 3 4 # 104 "/usr/include/x86_64-linux-gnu/sys/stat.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/stat.h" 1 3 4 # 46 "/usr/include/x86_64-linux-gnu/bits/stat.h" 3 4 struct stat { __dev_t st_dev; __ino_t st_ino; __nlink_t st_nlink; __mode_t st_mode; __uid_t st_uid; __gid_t st_gid; int __pad0; __dev_t st_rdev; __off_t st_size; __blksize_t st_blksize; __blkcnt_t st_blocks; # 91 "/usr/include/x86_64-linux-gnu/bits/stat.h" 3 4 struct timespec st_atim; struct timespec st_mtim; struct timespec st_ctim; # 106 "/usr/include/x86_64-linux-gnu/bits/stat.h" 3 4 __syscall_slong_t __unused[3]; # 115 "/usr/include/x86_64-linux-gnu/bits/stat.h" 3 4 }; # 107 "/usr/include/x86_64-linux-gnu/sys/stat.h" 2 3 4 # 210 "/usr/include/x86_64-linux-gnu/sys/stat.h" 3 4 extern int stat (const char *__restrict __file, struct stat *__restrict __buf) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))); extern int fstat (int __fd, struct stat *__buf) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (2))); # 239 "/usr/include/x86_64-linux-gnu/sys/stat.h" 3 4 extern int fstatat (int __fd, const char *__restrict __file, struct stat *__restrict __buf, int __flag) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (2, 3))); # 264 "/usr/include/x86_64-linux-gnu/sys/stat.h" 3 4 extern int lstat (const char *__restrict __file, struct stat *__restrict __buf) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))); # 285 "/usr/include/x86_64-linux-gnu/sys/stat.h" 3 4 extern int chmod (const char *__file, __mode_t __mode) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern int lchmod (const char *__file, __mode_t __mode) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern int fchmod (int __fd, __mode_t __mode) __attribute__ ((__nothrow__ , __leaf__)); extern int fchmodat (int __fd, const char *__file, __mode_t __mode, int __flag) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (2))) ; extern __mode_t umask (__mode_t __mask) __attribute__ ((__nothrow__ , __leaf__)); # 322 "/usr/include/x86_64-linux-gnu/sys/stat.h" 3 4 extern int mkdir (const char *__path, __mode_t __mode) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern int mkdirat (int __fd, const char *__path, __mode_t __mode) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (2))); extern int mknod (const char *__path, __mode_t __mode, __dev_t __dev) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern int mknodat (int __fd, const char *__path, __mode_t __mode, __dev_t __dev) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (2))); extern int mkfifo (const char *__path, __mode_t __mode) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern int mkfifoat (int __fd, const char *__path, __mode_t __mode) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (2))); extern int utimensat (int __fd, const char *__path, const struct timespec __times[2], int __flags) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (2))); extern int futimens (int __fd, const struct timespec __times[2]) __attribute__ ((__nothrow__ , __leaf__)); # 400 "/usr/include/x86_64-linux-gnu/sys/stat.h" 3 4 extern int __fxstat (int __ver, int __fildes, struct stat *__stat_buf) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (3))); extern int __xstat (int __ver, const char *__filename, struct stat *__stat_buf) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (2, 3))); extern int __lxstat (int __ver, const char *__filename, struct stat *__stat_buf) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (2, 3))); extern int __fxstatat (int __ver, int __fildes, const char *__filename, struct stat *__stat_buf, int __flag) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (3, 4))); # 443 "/usr/include/x86_64-linux-gnu/sys/stat.h" 3 4 extern int __xmknod (int __ver, const char *__path, __mode_t __mode, __dev_t *__dev) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (2, 4))); extern int __xmknodat (int __ver, int __fd, const char *__path, __mode_t __mode, __dev_t *__dev) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (3, 5))); # 535 "/usr/include/x86_64-linux-gnu/sys/stat.h" 3 4 # 6 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 ================================================================================ TEST checkSysWait from config.headers(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/headers.py:173) TESTING: checkSysWait from config.headers(config/BuildSystem/config/headers.py:173) Check for POSIX.1 compatible sys/wait.h, and defines HAVE_SYS_WAIT_H if found sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.headers/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -fPIC -g /tmp/petsc-U9YCMv/config.headers/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.headers/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -fPIC -g /tmp/petsc-U9YCMv/config.headers/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.headers/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.headers Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.headers/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.headers -o /tmp/petsc-U9YCMv/config.headers/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include #ifndef WEXITSTATUS #define WEXITSTATUS(stat_val) ((unsigned)(stat_val) >> 8) #endif #ifndef WIFEXITED #define WIFEXITED(stat_val) (((stat_val) & 255) == 0) #endif int main() { int s; wait (&s); s = WIFEXITED (s) ? WEXITSTATUS (s) : 1; ; return 0; } Defined "HAVE_SYS_WAIT_H" to "1" ================================================================================ TEST checkTime from config.headers(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/headers.py:195) TESTING: checkTime from config.headers(config/BuildSystem/config/headers.py:195) Checks if you can safely include both and , and if so defines TIME_WITH_SYS_TIME Checking for header: time.h sh: tau_cc.sh -E -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.headers /tmp/petsc-U9YCMv/config.headers/conftest.c Executing: tau_cc.sh -E -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.headers /tmp/petsc-U9YCMv/config.headers/conftest.c sh: # 1 "/tmp/petsc-U9YCMv/config.headers/conftest.c" # 1 "" # 1 "/tmp/petsc-U9YCMv/config.headers/conftest.c" # 1 "/tmp/petsc-U9YCMv/config.headers/confdefs.h" 1 # 2 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 # 1 "/tmp/petsc-U9YCMv/config.headers/conffix.h" 1 # 3 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 # 1 "/usr/include/time.h" 1 3 4 # 27 "/usr/include/time.h" 3 4 # 1 "/usr/include/features.h" 1 3 4 # 341 "/usr/include/features.h" 3 4 # 1 "/usr/include/stdc-predef.h" 1 3 4 # 30 "/usr/include/stdc-predef.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/predefs.h" 1 3 4 # 31 "/usr/include/stdc-predef.h" 2 3 4 # 342 "/usr/include/features.h" 2 3 4 # 371 "/usr/include/features.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/sys/cdefs.h" 1 3 4 # 385 "/usr/include/x86_64-linux-gnu/sys/cdefs.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/wordsize.h" 1 3 4 # 386 "/usr/include/x86_64-linux-gnu/sys/cdefs.h" 2 3 4 # 372 "/usr/include/features.h" 2 3 4 # 395 "/usr/include/features.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/gnu/stubs.h" 1 3 4 # 10 "/usr/include/x86_64-linux-gnu/gnu/stubs.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/gnu/stubs-64.h" 1 3 4 # 11 "/usr/include/x86_64-linux-gnu/gnu/stubs.h" 2 3 4 # 396 "/usr/include/features.h" 2 3 4 # 28 "/usr/include/time.h" 2 3 4 # 1 "/usr/lib/gcc/x86_64-linux-gnu/4.7/include/stddef.h" 1 3 4 # 213 "/usr/lib/gcc/x86_64-linux-gnu/4.7/include/stddef.h" 3 4 typedef long unsigned int size_t; # 38 "/usr/include/time.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/time.h" 1 3 4 # 42 "/usr/include/time.h" 2 3 4 # 55 "/usr/include/time.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/types.h" 1 3 4 # 27 "/usr/include/x86_64-linux-gnu/bits/types.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/wordsize.h" 1 3 4 # 28 "/usr/include/x86_64-linux-gnu/bits/types.h" 2 3 4 typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; # 130 "/usr/include/x86_64-linux-gnu/bits/types.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/typesizes.h" 1 3 4 # 131 "/usr/include/x86_64-linux-gnu/bits/types.h" 2 3 4 typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned long int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef long int __suseconds_t; typedef int __daddr_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __fsword_t; typedef long int __ssize_t; typedef long int __syscall_slong_t; typedef unsigned long int __syscall_ulong_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; # 56 "/usr/include/time.h" 2 3 4 typedef __clock_t clock_t; # 73 "/usr/include/time.h" 3 4 typedef __time_t time_t; # 91 "/usr/include/time.h" 3 4 typedef __clockid_t clockid_t; # 103 "/usr/include/time.h" 3 4 typedef __timer_t timer_t; # 120 "/usr/include/time.h" 3 4 struct timespec { __time_t tv_sec; __syscall_slong_t tv_nsec; }; struct tm { int tm_sec; int tm_min; int tm_hour; int tm_mday; int tm_mon; int tm_year; int tm_wday; int tm_yday; int tm_isdst; long int tm_gmtoff; const char *tm_zone; }; struct itimerspec { struct timespec it_interval; struct timespec it_value; }; struct sigevent; typedef __pid_t pid_t; # 186 "/usr/include/time.h" 3 4 extern clock_t clock (void) __attribute__ ((__nothrow__ , __leaf__)); extern time_t time (time_t *__timer) __attribute__ ((__nothrow__ , __leaf__)); extern double difftime (time_t __time1, time_t __time0) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); extern time_t mktime (struct tm *__tp) __attribute__ ((__nothrow__ , __leaf__)); extern size_t strftime (char *__restrict __s, size_t __maxsize, const char *__restrict __format, const struct tm *__restrict __tp) __attribute__ ((__nothrow__ , __leaf__)); # 221 "/usr/include/time.h" 3 4 # 1 "/usr/include/xlocale.h" 1 3 4 # 27 "/usr/include/xlocale.h" 3 4 typedef struct __locale_struct { struct __locale_data *__locales[13]; const unsigned short int *__ctype_b; const int *__ctype_tolower; const int *__ctype_toupper; const char *__names[13]; } *__locale_t; typedef __locale_t locale_t; # 222 "/usr/include/time.h" 2 3 4 extern size_t strftime_l (char *__restrict __s, size_t __maxsize, const char *__restrict __format, const struct tm *__restrict __tp, __locale_t __loc) __attribute__ ((__nothrow__ , __leaf__)); # 236 "/usr/include/time.h" 3 4 extern struct tm *gmtime (const time_t *__timer) __attribute__ ((__nothrow__ , __leaf__)); extern struct tm *localtime (const time_t *__timer) __attribute__ ((__nothrow__ , __leaf__)); extern struct tm *gmtime_r (const time_t *__restrict __timer, struct tm *__restrict __tp) __attribute__ ((__nothrow__ , __leaf__)); extern struct tm *localtime_r (const time_t *__restrict __timer, struct tm *__restrict __tp) __attribute__ ((__nothrow__ , __leaf__)); extern char *asctime (const struct tm *__tp) __attribute__ ((__nothrow__ , __leaf__)); extern char *ctime (const time_t *__timer) __attribute__ ((__nothrow__ , __leaf__)); extern char *asctime_r (const struct tm *__restrict __tp, char *__restrict __buf) __attribute__ ((__nothrow__ , __leaf__)); extern char *ctime_r (const time_t *__restrict __timer, char *__restrict __buf) __attribute__ ((__nothrow__ , __leaf__)); extern char *__tzname[2]; extern int __daylight; extern long int __timezone; extern char *tzname[2]; extern void tzset (void) __attribute__ ((__nothrow__ , __leaf__)); extern int daylight; extern long int timezone; extern int stime (const time_t *__when) __attribute__ ((__nothrow__ , __leaf__)); # 319 "/usr/include/time.h" 3 4 extern time_t timegm (struct tm *__tp) __attribute__ ((__nothrow__ , __leaf__)); extern time_t timelocal (struct tm *__tp) __attribute__ ((__nothrow__ , __leaf__)); extern int dysize (int __year) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); # 334 "/usr/include/time.h" 3 4 extern int nanosleep (const struct timespec *__requested_time, struct timespec *__remaining); extern int clock_getres (clockid_t __clock_id, struct timespec *__res) __attribute__ ((__nothrow__ , __leaf__)); extern int clock_gettime (clockid_t __clock_id, struct timespec *__tp) __attribute__ ((__nothrow__ , __leaf__)); extern int clock_settime (clockid_t __clock_id, const struct timespec *__tp) __attribute__ ((__nothrow__ , __leaf__)); extern int clock_nanosleep (clockid_t __clock_id, int __flags, const struct timespec *__req, struct timespec *__rem); extern int clock_getcpuclockid (pid_t __pid, clockid_t *__clock_id) __attribute__ ((__nothrow__ , __leaf__)); extern int timer_create (clockid_t __clock_id, struct sigevent *__restrict __evp, timer_t *__restrict __timerid) __attribute__ ((__nothrow__ , __leaf__)); extern int timer_delete (timer_t __timerid) __attribute__ ((__nothrow__ , __leaf__)); extern int timer_settime (timer_t __timerid, int __flags, const struct itimerspec *__restrict __value, struct itimerspec *__restrict __ovalue) __attribute__ ((__nothrow__ , __leaf__)); extern int timer_gettime (timer_t __timerid, struct itimerspec *__value) __attribute__ ((__nothrow__ , __leaf__)); extern int timer_getoverrun (timer_t __timerid) __attribute__ ((__nothrow__ , __leaf__)); # 430 "/usr/include/time.h" 3 4 # 3 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 Defined "HAVE_TIME_H" to "1" Checking for header: sys/time.h sh: tau_cc.sh -E -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.headers /tmp/petsc-U9YCMv/config.headers/conftest.c Executing: tau_cc.sh -E -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.headers /tmp/petsc-U9YCMv/config.headers/conftest.c sh: # 1 "/tmp/petsc-U9YCMv/config.headers/conftest.c" # 1 "" # 1 "/tmp/petsc-U9YCMv/config.headers/conftest.c" # 1 "/tmp/petsc-U9YCMv/config.headers/confdefs.h" 1 # 2 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 # 1 "/tmp/petsc-U9YCMv/config.headers/conffix.h" 1 # 3 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 # 1 "/usr/include/x86_64-linux-gnu/sys/time.h" 1 3 4 # 22 "/usr/include/x86_64-linux-gnu/sys/time.h" 3 4 # 1 "/usr/include/features.h" 1 3 4 # 341 "/usr/include/features.h" 3 4 # 1 "/usr/include/stdc-predef.h" 1 3 4 # 30 "/usr/include/stdc-predef.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/predefs.h" 1 3 4 # 31 "/usr/include/stdc-predef.h" 2 3 4 # 342 "/usr/include/features.h" 2 3 4 # 371 "/usr/include/features.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/sys/cdefs.h" 1 3 4 # 385 "/usr/include/x86_64-linux-gnu/sys/cdefs.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/wordsize.h" 1 3 4 # 386 "/usr/include/x86_64-linux-gnu/sys/cdefs.h" 2 3 4 # 372 "/usr/include/features.h" 2 3 4 # 395 "/usr/include/features.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/gnu/stubs.h" 1 3 4 # 10 "/usr/include/x86_64-linux-gnu/gnu/stubs.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/gnu/stubs-64.h" 1 3 4 # 11 "/usr/include/x86_64-linux-gnu/gnu/stubs.h" 2 3 4 # 396 "/usr/include/features.h" 2 3 4 # 23 "/usr/include/x86_64-linux-gnu/sys/time.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/types.h" 1 3 4 # 27 "/usr/include/x86_64-linux-gnu/bits/types.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/wordsize.h" 1 3 4 # 28 "/usr/include/x86_64-linux-gnu/bits/types.h" 2 3 4 typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; # 130 "/usr/include/x86_64-linux-gnu/bits/types.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/typesizes.h" 1 3 4 # 131 "/usr/include/x86_64-linux-gnu/bits/types.h" 2 3 4 typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned long int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef long int __suseconds_t; typedef int __daddr_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __fsword_t; typedef long int __ssize_t; typedef long int __syscall_slong_t; typedef unsigned long int __syscall_ulong_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; # 25 "/usr/include/x86_64-linux-gnu/sys/time.h" 2 3 4 # 1 "/usr/include/time.h" 1 3 4 # 73 "/usr/include/time.h" 3 4 typedef __time_t time_t; # 27 "/usr/include/x86_64-linux-gnu/sys/time.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/time.h" 1 3 4 # 30 "/usr/include/x86_64-linux-gnu/bits/time.h" 3 4 struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; # 29 "/usr/include/x86_64-linux-gnu/sys/time.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/sys/select.h" 1 3 4 # 30 "/usr/include/x86_64-linux-gnu/sys/select.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/select.h" 1 3 4 # 22 "/usr/include/x86_64-linux-gnu/bits/select.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/wordsize.h" 1 3 4 # 23 "/usr/include/x86_64-linux-gnu/bits/select.h" 2 3 4 # 31 "/usr/include/x86_64-linux-gnu/sys/select.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/sigset.h" 1 3 4 # 23 "/usr/include/x86_64-linux-gnu/bits/sigset.h" 3 4 typedef int __sig_atomic_t; typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; # 34 "/usr/include/x86_64-linux-gnu/sys/select.h" 2 3 4 typedef __sigset_t sigset_t; # 1 "/usr/include/time.h" 1 3 4 # 120 "/usr/include/time.h" 3 4 struct timespec { __time_t tv_sec; __syscall_slong_t tv_nsec; }; # 44 "/usr/include/x86_64-linux-gnu/sys/select.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/time.h" 1 3 4 # 46 "/usr/include/x86_64-linux-gnu/sys/select.h" 2 3 4 typedef __suseconds_t suseconds_t; typedef long int __fd_mask; # 64 "/usr/include/x86_64-linux-gnu/sys/select.h" 3 4 typedef struct { __fd_mask __fds_bits[1024 / (8 * (int) sizeof (__fd_mask))]; } fd_set; typedef __fd_mask fd_mask; # 96 "/usr/include/x86_64-linux-gnu/sys/select.h" 3 4 # 106 "/usr/include/x86_64-linux-gnu/sys/select.h" 3 4 extern int select (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, struct timeval *__restrict __timeout); # 118 "/usr/include/x86_64-linux-gnu/sys/select.h" 3 4 extern int pselect (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, const struct timespec *__restrict __timeout, const __sigset_t *__restrict __sigmask); # 131 "/usr/include/x86_64-linux-gnu/sys/select.h" 3 4 # 31 "/usr/include/x86_64-linux-gnu/sys/time.h" 2 3 4 # 56 "/usr/include/x86_64-linux-gnu/sys/time.h" 3 4 struct timezone { int tz_minuteswest; int tz_dsttime; }; typedef struct timezone *__restrict __timezone_ptr_t; # 72 "/usr/include/x86_64-linux-gnu/sys/time.h" 3 4 extern int gettimeofday (struct timeval *__restrict __tv, __timezone_ptr_t __tz) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern int settimeofday (const struct timeval *__tv, const struct timezone *__tz) __attribute__ ((__nothrow__ , __leaf__)); extern int adjtime (const struct timeval *__delta, struct timeval *__olddelta) __attribute__ ((__nothrow__ , __leaf__)); enum __itimer_which { ITIMER_REAL = 0, ITIMER_VIRTUAL = 1, ITIMER_PROF = 2 }; struct itimerval { struct timeval it_interval; struct timeval it_value; }; typedef int __itimer_which_t; extern int getitimer (__itimer_which_t __which, struct itimerval *__value) __attribute__ ((__nothrow__ , __leaf__)); extern int setitimer (__itimer_which_t __which, const struct itimerval *__restrict __new, struct itimerval *__restrict __old) __attribute__ ((__nothrow__ , __leaf__)); extern int utimes (const char *__file, const struct timeval __tvp[2]) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern int lutimes (const char *__file, const struct timeval __tvp[2]) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern int futimes (int __fd, const struct timeval __tvp[2]) __attribute__ ((__nothrow__ , __leaf__)); # 190 "/usr/include/x86_64-linux-gnu/sys/time.h" 3 4 # 3 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 Defined "HAVE_SYS_TIME_H" to "1" sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.headers/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -fPIC -g /tmp/petsc-U9YCMv/config.headers/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.headers/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -fPIC -g /tmp/petsc-U9YCMv/config.headers/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.headers/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.headers Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.headers/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.headers -o /tmp/petsc-U9YCMv/config.headers/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include #include int main() { struct tm *tp = 0; if (tp); ; return 0; } Defined "TIME_WITH_SYS_TIME" to "1" ================================================================================ TEST checkMath from config.headers(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/headers.py:203) TESTING: checkMath from config.headers(config/BuildSystem/config/headers.py:203) Checks for the math headers and defines Checking for header: math.h sh: tau_cc.sh -E -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.headers /tmp/petsc-U9YCMv/config.headers/conftest.c Executing: tau_cc.sh -E -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.headers /tmp/petsc-U9YCMv/config.headers/conftest.c sh: # 1 "/tmp/petsc-U9YCMv/config.headers/conftest.c" # 1 "" # 1 "/tmp/petsc-U9YCMv/config.headers/conftest.c" # 1 "/tmp/petsc-U9YCMv/config.headers/confdefs.h" 1 # 2 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 # 1 "/tmp/petsc-U9YCMv/config.headers/conffix.h" 1 # 3 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 # 1 "/usr/include/math.h" 1 3 4 # 27 "/usr/include/math.h" 3 4 # 1 "/usr/include/features.h" 1 3 4 # 341 "/usr/include/features.h" 3 4 # 1 "/usr/include/stdc-predef.h" 1 3 4 # 30 "/usr/include/stdc-predef.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/predefs.h" 1 3 4 # 31 "/usr/include/stdc-predef.h" 2 3 4 # 342 "/usr/include/features.h" 2 3 4 # 371 "/usr/include/features.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/sys/cdefs.h" 1 3 4 # 385 "/usr/include/x86_64-linux-gnu/sys/cdefs.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/wordsize.h" 1 3 4 # 386 "/usr/include/x86_64-linux-gnu/sys/cdefs.h" 2 3 4 # 372 "/usr/include/features.h" 2 3 4 # 395 "/usr/include/features.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/gnu/stubs.h" 1 3 4 # 10 "/usr/include/x86_64-linux-gnu/gnu/stubs.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/gnu/stubs-64.h" 1 3 4 # 11 "/usr/include/x86_64-linux-gnu/gnu/stubs.h" 2 3 4 # 396 "/usr/include/features.h" 2 3 4 # 28 "/usr/include/math.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/huge_val.h" 1 3 4 # 34 "/usr/include/math.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/huge_valf.h" 1 3 4 # 36 "/usr/include/math.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/huge_vall.h" 1 3 4 # 37 "/usr/include/math.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/inf.h" 1 3 4 # 40 "/usr/include/math.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/nan.h" 1 3 4 # 43 "/usr/include/math.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/mathdef.h" 1 3 4 # 28 "/usr/include/x86_64-linux-gnu/bits/mathdef.h" 3 4 typedef float float_t; typedef double double_t; # 47 "/usr/include/math.h" 2 3 4 # 70 "/usr/include/math.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/mathcalls.h" 1 3 4 # 52 "/usr/include/x86_64-linux-gnu/bits/mathcalls.h" 3 4 extern double acos (double __x) __attribute__ ((__nothrow__ , __leaf__)); extern double __acos (double __x) __attribute__ ((__nothrow__ , __leaf__)); extern double asin (double __x) __attribute__ ((__nothrow__ , __leaf__)); extern double __asin (double __x) __attribute__ ((__nothrow__ , __leaf__)); extern double atan (double __x) __attribute__ ((__nothrow__ , __leaf__)); extern double __atan (double __x) __attribute__ ((__nothrow__ , __leaf__)); extern double atan2 (double __y, double __x) __attribute__ ((__nothrow__ , __leaf__)); extern double __atan2 (double __y, double __x) __attribute__ ((__nothrow__ , __leaf__)); extern double cos (double __x) __attribute__ ((__nothrow__ , __leaf__)); extern double __cos (double __x) __attribute__ ((__nothrow__ , __leaf__)); extern double sin (double __x) __attribute__ ((__nothrow__ , __leaf__)); extern double __sin (double __x) __attribute__ ((__nothrow__ , __leaf__)); extern double tan (double __x) __attribute__ ((__nothrow__ , __leaf__)); extern double __tan (double __x) __attribute__ ((__nothrow__ , __leaf__)); extern double cosh (double __x) __attribute__ ((__nothrow__ , __leaf__)); extern double __cosh (double __x) __attribute__ ((__nothrow__ , __leaf__)); extern double sinh (double __x) __attribute__ ((__nothrow__ , __leaf__)); extern double __sinh (double __x) __attribute__ ((__nothrow__ , __leaf__)); extern double tanh (double __x) __attribute__ ((__nothrow__ , __leaf__)); extern double __tanh (double __x) __attribute__ ((__nothrow__ , __leaf__)); # 86 "/usr/include/x86_64-linux-gnu/bits/mathcalls.h" 3 4 extern double acosh (double __x) __attribute__ ((__nothrow__ , __leaf__)); extern double __acosh (double __x) __attribute__ ((__nothrow__ , __leaf__)); extern double asinh (double __x) __attribute__ ((__nothrow__ , __leaf__)); extern double __asinh (double __x) __attribute__ ((__nothrow__ , __leaf__)); extern double atanh (double __x) __attribute__ ((__nothrow__ , __leaf__)); extern double __atanh (double __x) __attribute__ ((__nothrow__ , __leaf__)); extern double exp (double __x) __attribute__ ((__nothrow__ , __leaf__)); extern double __exp (double __x) __attribute__ ((__nothrow__ , __leaf__)); extern double frexp (double __x, int *__exponent) __attribute__ ((__nothrow__ , __leaf__)); extern double __frexp (double __x, int *__exponent) __attribute__ ((__nothrow__ , __leaf__)); extern double ldexp (double __x, int __exponent) __attribute__ ((__nothrow__ , __leaf__)); extern double __ldexp (double __x, int __exponent) __attribute__ ((__nothrow__ , __leaf__)); extern double log (double __x) __attribute__ ((__nothrow__ , __leaf__)); extern double __log (double __x) __attribute__ ((__nothrow__ , __leaf__)); extern double log10 (double __x) __attribute__ ((__nothrow__ , __leaf__)); extern double __log10 (double __x) __attribute__ ((__nothrow__ , __leaf__)); extern double modf (double __x, double *__iptr) __attribute__ ((__nothrow__ , __leaf__)); extern double __modf (double __x, double *__iptr) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (2))); # 127 "/usr/include/x86_64-linux-gnu/bits/mathcalls.h" 3 4 extern double expm1 (double __x) __attribute__ ((__nothrow__ , __leaf__)); extern double __expm1 (double __x) __attribute__ ((__nothrow__ , __leaf__)); extern double log1p (double __x) __attribute__ ((__nothrow__ , __leaf__)); extern double __log1p (double __x) __attribute__ ((__nothrow__ , __leaf__)); extern double logb (double __x) __attribute__ ((__nothrow__ , __leaf__)); extern double __logb (double __x) __attribute__ ((__nothrow__ , __leaf__)); extern double exp2 (double __x) __attribute__ ((__nothrow__ , __leaf__)); extern double __exp2 (double __x) __attribute__ ((__nothrow__ , __leaf__)); extern double log2 (double __x) __attribute__ ((__nothrow__ , __leaf__)); extern double __log2 (double __x) __attribute__ ((__nothrow__ , __leaf__)); extern double pow (double __x, double __y) __attribute__ ((__nothrow__ , __leaf__)); extern double __pow (double __x, double __y) __attribute__ ((__nothrow__ , __leaf__)); extern double sqrt (double __x) __attribute__ ((__nothrow__ , __leaf__)); extern double __sqrt (double __x) __attribute__ ((__nothrow__ , __leaf__)); extern double hypot (double __x, double __y) __attribute__ ((__nothrow__ , __leaf__)); extern double __hypot (double __x, double __y) __attribute__ ((__nothrow__ , __leaf__)); extern double cbrt (double __x) __attribute__ ((__nothrow__ , __leaf__)); extern double __cbrt (double __x) __attribute__ ((__nothrow__ , __leaf__)); extern double ceil (double __x) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); extern double __ceil (double __x) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); extern double fabs (double __x) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); extern double __fabs (double __x) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); extern double floor (double __x) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); extern double __floor (double __x) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); extern double fmod (double __x, double __y) __attribute__ ((__nothrow__ , __leaf__)); extern double __fmod (double __x, double __y) __attribute__ ((__nothrow__ , __leaf__)); extern int __isinf (double __value) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); extern int __finite (double __value) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); extern int isinf (double __value) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); extern int finite (double __value) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); extern double drem (double __x, double __y) __attribute__ ((__nothrow__ , __leaf__)); extern double __drem (double __x, double __y) __attribute__ ((__nothrow__ , __leaf__)); extern double significand (double __x) __attribute__ ((__nothrow__ , __leaf__)); extern double __significand (double __x) __attribute__ ((__nothrow__ , __leaf__)); extern double copysign (double __x, double __y) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); extern double __copysign (double __x, double __y) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); extern double nan (const char *__tagb) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); extern double __nan (const char *__tagb) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); extern int __isnan (double __value) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); extern int isnan (double __value) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); extern double j0 (double) __attribute__ ((__nothrow__ , __leaf__)); extern double __j0 (double) __attribute__ ((__nothrow__ , __leaf__)); extern double j1 (double) __attribute__ ((__nothrow__ , __leaf__)); extern double __j1 (double) __attribute__ ((__nothrow__ , __leaf__)); extern double jn (int, double) __attribute__ ((__nothrow__ , __leaf__)); extern double __jn (int, double) __attribute__ ((__nothrow__ , __leaf__)); extern double y0 (double) __attribute__ ((__nothrow__ , __leaf__)); extern double __y0 (double) __attribute__ ((__nothrow__ , __leaf__)); extern double y1 (double) __attribute__ ((__nothrow__ , __leaf__)); extern double __y1 (double) __attribute__ ((__nothrow__ , __leaf__)); extern double yn (int, double) __attribute__ ((__nothrow__ , __leaf__)); extern double __yn (int, double) __attribute__ ((__nothrow__ , __leaf__)); extern double erf (double) __attribute__ ((__nothrow__ , __leaf__)); extern double __erf (double) __attribute__ ((__nothrow__ , __leaf__)); extern double erfc (double) __attribute__ ((__nothrow__ , __leaf__)); extern double __erfc (double) __attribute__ ((__nothrow__ , __leaf__)); extern double lgamma (double) __attribute__ ((__nothrow__ , __leaf__)); extern double __lgamma (double) __attribute__ ((__nothrow__ , __leaf__)); extern double tgamma (double) __attribute__ ((__nothrow__ , __leaf__)); extern double __tgamma (double) __attribute__ ((__nothrow__ , __leaf__)); extern double gamma (double) __attribute__ ((__nothrow__ , __leaf__)); extern double __gamma (double) __attribute__ ((__nothrow__ , __leaf__)); extern double lgamma_r (double, int *__signgamp) __attribute__ ((__nothrow__ , __leaf__)); extern double __lgamma_r (double, int *__signgamp) __attribute__ ((__nothrow__ , __leaf__)); extern double rint (double __x) __attribute__ ((__nothrow__ , __leaf__)); extern double __rint (double __x) __attribute__ ((__nothrow__ , __leaf__)); extern double nextafter (double __x, double __y) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); extern double __nextafter (double __x, double __y) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); extern double nexttoward (double __x, long double __y) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); extern double __nexttoward (double __x, long double __y) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); extern double remainder (double __x, double __y) __attribute__ ((__nothrow__ , __leaf__)); extern double __remainder (double __x, double __y) __attribute__ ((__nothrow__ , __leaf__)); extern double scalbn (double __x, int __n) __attribute__ ((__nothrow__ , __leaf__)); extern double __scalbn (double __x, int __n) __attribute__ ((__nothrow__ , __leaf__)); extern int ilogb (double __x) __attribute__ ((__nothrow__ , __leaf__)); extern int __ilogb (double __x) __attribute__ ((__nothrow__ , __leaf__)); extern double scalbln (double __x, long int __n) __attribute__ ((__nothrow__ , __leaf__)); extern double __scalbln (double __x, long int __n) __attribute__ ((__nothrow__ , __leaf__)); extern double nearbyint (double __x) __attribute__ ((__nothrow__ , __leaf__)); extern double __nearbyint (double __x) __attribute__ ((__nothrow__ , __leaf__)); extern double round (double __x) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); extern double __round (double __x) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); extern double trunc (double __x) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); extern double __trunc (double __x) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); extern double remquo (double __x, double __y, int *__quo) __attribute__ ((__nothrow__ , __leaf__)); extern double __remquo (double __x, double __y, int *__quo) __attribute__ ((__nothrow__ , __leaf__)); extern long int lrint (double __x) __attribute__ ((__nothrow__ , __leaf__)); extern long int __lrint (double __x) __attribute__ ((__nothrow__ , __leaf__)); extern long long int llrint (double __x) __attribute__ ((__nothrow__ , __leaf__)); extern long long int __llrint (double __x) __attribute__ ((__nothrow__ , __leaf__)); extern long int lround (double __x) __attribute__ ((__nothrow__ , __leaf__)); extern long int __lround (double __x) __attribute__ ((__nothrow__ , __leaf__)); extern long long int llround (double __x) __attribute__ ((__nothrow__ , __leaf__)); extern long long int __llround (double __x) __attribute__ ((__nothrow__ , __leaf__)); extern double fdim (double __x, double __y) __attribute__ ((__nothrow__ , __leaf__)); extern double __fdim (double __x, double __y) __attribute__ ((__nothrow__ , __leaf__)); extern double fmax (double __x, double __y) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); extern double __fmax (double __x, double __y) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); extern double fmin (double __x, double __y) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); extern double __fmin (double __x, double __y) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); extern int __fpclassify (double __value) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); extern int __signbit (double __value) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); extern double fma (double __x, double __y, double __z) __attribute__ ((__nothrow__ , __leaf__)); extern double __fma (double __x, double __y, double __z) __attribute__ ((__nothrow__ , __leaf__)); extern double scalb (double __x, double __n) __attribute__ ((__nothrow__ , __leaf__)); extern double __scalb (double __x, double __n) __attribute__ ((__nothrow__ , __leaf__)); # 71 "/usr/include/math.h" 2 3 4 # 89 "/usr/include/math.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/mathcalls.h" 1 3 4 # 52 "/usr/include/x86_64-linux-gnu/bits/mathcalls.h" 3 4 extern float acosf (float __x) __attribute__ ((__nothrow__ , __leaf__)); extern float __acosf (float __x) __attribute__ ((__nothrow__ , __leaf__)); extern float asinf (float __x) __attribute__ ((__nothrow__ , __leaf__)); extern float __asinf (float __x) __attribute__ ((__nothrow__ , __leaf__)); extern float atanf (float __x) __attribute__ ((__nothrow__ , __leaf__)); extern float __atanf (float __x) __attribute__ ((__nothrow__ , __leaf__)); extern float atan2f (float __y, float __x) __attribute__ ((__nothrow__ , __leaf__)); extern float __atan2f (float __y, float __x) __attribute__ ((__nothrow__ , __leaf__)); extern float cosf (float __x) __attribute__ ((__nothrow__ , __leaf__)); extern float __cosf (float __x) __attribute__ ((__nothrow__ , __leaf__)); extern float sinf (float __x) __attribute__ ((__nothrow__ , __leaf__)); extern float __sinf (float __x) __attribute__ ((__nothrow__ , __leaf__)); extern float tanf (float __x) __attribute__ ((__nothrow__ , __leaf__)); extern float __tanf (float __x) __attribute__ ((__nothrow__ , __leaf__)); extern float coshf (float __x) __attribute__ ((__nothrow__ , __leaf__)); extern float __coshf (float __x) __attribute__ ((__nothrow__ , __leaf__)); extern float sinhf (float __x) __attribute__ ((__nothrow__ , __leaf__)); extern float __sinhf (float __x) __attribute__ ((__nothrow__ , __leaf__)); extern float tanhf (float __x) __attribute__ ((__nothrow__ , __leaf__)); extern float __tanhf (float __x) __attribute__ ((__nothrow__ , __leaf__)); # 86 "/usr/include/x86_64-linux-gnu/bits/mathcalls.h" 3 4 extern float acoshf (float __x) __attribute__ ((__nothrow__ , __leaf__)); extern float __acoshf (float __x) __attribute__ ((__nothrow__ , __leaf__)); extern float asinhf (float __x) __attribute__ ((__nothrow__ , __leaf__)); extern float __asinhf (float __x) __attribute__ ((__nothrow__ , __leaf__)); extern float atanhf (float __x) __attribute__ ((__nothrow__ , __leaf__)); extern float __atanhf (float __x) __attribute__ ((__nothrow__ , __leaf__)); extern float expf (float __x) __attribute__ ((__nothrow__ , __leaf__)); extern float __expf (float __x) __attribute__ ((__nothrow__ , __leaf__)); extern float frexpf (float __x, int *__exponent) __attribute__ ((__nothrow__ , __leaf__)); extern float __frexpf (float __x, int *__exponent) __attribute__ ((__nothrow__ , __leaf__)); extern float ldexpf (float __x, int __exponent) __attribute__ ((__nothrow__ , __leaf__)); extern float __ldexpf (float __x, int __exponent) __attribute__ ((__nothrow__ , __leaf__)); extern float logf (float __x) __attribute__ ((__nothrow__ , __leaf__)); extern float __logf (float __x) __attribute__ ((__nothrow__ , __leaf__)); extern float log10f (float __x) __attribute__ ((__nothrow__ , __leaf__)); extern float __log10f (float __x) __attribute__ ((__nothrow__ , __leaf__)); extern float modff (float __x, float *__iptr) __attribute__ ((__nothrow__ , __leaf__)); extern float __modff (float __x, float *__iptr) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (2))); # 127 "/usr/include/x86_64-linux-gnu/bits/mathcalls.h" 3 4 extern float expm1f (float __x) __attribute__ ((__nothrow__ , __leaf__)); extern float __expm1f (float __x) __attribute__ ((__nothrow__ , __leaf__)); extern float log1pf (float __x) __attribute__ ((__nothrow__ , __leaf__)); extern float __log1pf (float __x) __attribute__ ((__nothrow__ , __leaf__)); extern float logbf (float __x) __attribute__ ((__nothrow__ , __leaf__)); extern float __logbf (float __x) __attribute__ ((__nothrow__ , __leaf__)); extern float exp2f (float __x) __attribute__ ((__nothrow__ , __leaf__)); extern float __exp2f (float __x) __attribute__ ((__nothrow__ , __leaf__)); extern float log2f (float __x) __attribute__ ((__nothrow__ , __leaf__)); extern float __log2f (float __x) __attribute__ ((__nothrow__ , __leaf__)); extern float powf (float __x, float __y) __attribute__ ((__nothrow__ , __leaf__)); extern float __powf (float __x, float __y) __attribute__ ((__nothrow__ , __leaf__)); extern float sqrtf (float __x) __attribute__ ((__nothrow__ , __leaf__)); extern float __sqrtf (float __x) __attribute__ ((__nothrow__ , __leaf__)); extern float hypotf (float __x, float __y) __attribute__ ((__nothrow__ , __leaf__)); extern float __hypotf (float __x, float __y) __attribute__ ((__nothrow__ , __leaf__)); extern float cbrtf (float __x) __attribute__ ((__nothrow__ , __leaf__)); extern float __cbrtf (float __x) __attribute__ ((__nothrow__ , __leaf__)); extern float ceilf (float __x) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); extern float __ceilf (float __x) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); extern float fabsf (float __x) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); extern float __fabsf (float __x) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); extern float floorf (float __x) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); extern float __floorf (float __x) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); extern float fmodf (float __x, float __y) __attribute__ ((__nothrow__ , __leaf__)); extern float __fmodf (float __x, float __y) __attribute__ ((__nothrow__ , __leaf__)); extern int __isinff (float __value) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); extern int __finitef (float __value) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); extern int isinff (float __value) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); extern int finitef (float __value) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); extern float dremf (float __x, float __y) __attribute__ ((__nothrow__ , __leaf__)); extern float __dremf (float __x, float __y) __attribute__ ((__nothrow__ , __leaf__)); extern float significandf (float __x) __attribute__ ((__nothrow__ , __leaf__)); extern float __significandf (float __x) __attribute__ ((__nothrow__ , __leaf__)); extern float copysignf (float __x, float __y) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); extern float __copysignf (float __x, float __y) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); extern float nanf (const char *__tagb) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); extern float __nanf (const char *__tagb) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); extern int __isnanf (float __value) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); extern int isnanf (float __value) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); extern float j0f (float) __attribute__ ((__nothrow__ , __leaf__)); extern float __j0f (float) __attribute__ ((__nothrow__ , __leaf__)); extern float j1f (float) __attribute__ ((__nothrow__ , __leaf__)); extern float __j1f (float) __attribute__ ((__nothrow__ , __leaf__)); extern float jnf (int, float) __attribute__ ((__nothrow__ , __leaf__)); extern float __jnf (int, float) __attribute__ ((__nothrow__ , __leaf__)); extern float y0f (float) __attribute__ ((__nothrow__ , __leaf__)); extern float __y0f (float) __attribute__ ((__nothrow__ , __leaf__)); extern float y1f (float) __attribute__ ((__nothrow__ , __leaf__)); extern float __y1f (float) __attribute__ ((__nothrow__ , __leaf__)); extern float ynf (int, float) __attribute__ ((__nothrow__ , __leaf__)); extern float __ynf (int, float) __attribute__ ((__nothrow__ , __leaf__)); extern float erff (float) __attribute__ ((__nothrow__ , __leaf__)); extern float __erff (float) __attribute__ ((__nothrow__ , __leaf__)); extern float erfcf (float) __attribute__ ((__nothrow__ , __leaf__)); extern float __erfcf (float) __attribute__ ((__nothrow__ , __leaf__)); extern float lgammaf (float) __attribute__ ((__nothrow__ , __leaf__)); extern float __lgammaf (float) __attribute__ ((__nothrow__ , __leaf__)); extern float tgammaf (float) __attribute__ ((__nothrow__ , __leaf__)); extern float __tgammaf (float) __attribute__ ((__nothrow__ , __leaf__)); extern float gammaf (float) __attribute__ ((__nothrow__ , __leaf__)); extern float __gammaf (float) __attribute__ ((__nothrow__ , __leaf__)); extern float lgammaf_r (float, int *__signgamp) __attribute__ ((__nothrow__ , __leaf__)); extern float __lgammaf_r (float, int *__signgamp) __attribute__ ((__nothrow__ , __leaf__)); extern float rintf (float __x) __attribute__ ((__nothrow__ , __leaf__)); extern float __rintf (float __x) __attribute__ ((__nothrow__ , __leaf__)); extern float nextafterf (float __x, float __y) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); extern float __nextafterf (float __x, float __y) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); extern float nexttowardf (float __x, long double __y) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); extern float __nexttowardf (float __x, long double __y) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); extern float remainderf (float __x, float __y) __attribute__ ((__nothrow__ , __leaf__)); extern float __remainderf (float __x, float __y) __attribute__ ((__nothrow__ , __leaf__)); extern float scalbnf (float __x, int __n) __attribute__ ((__nothrow__ , __leaf__)); extern float __scalbnf (float __x, int __n) __attribute__ ((__nothrow__ , __leaf__)); extern int ilogbf (float __x) __attribute__ ((__nothrow__ , __leaf__)); extern int __ilogbf (float __x) __attribute__ ((__nothrow__ , __leaf__)); extern float scalblnf (float __x, long int __n) __attribute__ ((__nothrow__ , __leaf__)); extern float __scalblnf (float __x, long int __n) __attribute__ ((__nothrow__ , __leaf__)); extern float nearbyintf (float __x) __attribute__ ((__nothrow__ , __leaf__)); extern float __nearbyintf (float __x) __attribute__ ((__nothrow__ , __leaf__)); extern float roundf (float __x) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); extern float __roundf (float __x) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); extern float truncf (float __x) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); extern float __truncf (float __x) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); extern float remquof (float __x, float __y, int *__quo) __attribute__ ((__nothrow__ , __leaf__)); extern float __remquof (float __x, float __y, int *__quo) __attribute__ ((__nothrow__ , __leaf__)); extern long int lrintf (float __x) __attribute__ ((__nothrow__ , __leaf__)); extern long int __lrintf (float __x) __attribute__ ((__nothrow__ , __leaf__)); extern long long int llrintf (float __x) __attribute__ ((__nothrow__ , __leaf__)); extern long long int __llrintf (float __x) __attribute__ ((__nothrow__ , __leaf__)); extern long int lroundf (float __x) __attribute__ ((__nothrow__ , __leaf__)); extern long int __lroundf (float __x) __attribute__ ((__nothrow__ , __leaf__)); extern long long int llroundf (float __x) __attribute__ ((__nothrow__ , __leaf__)); extern long long int __llroundf (float __x) __attribute__ ((__nothrow__ , __leaf__)); extern float fdimf (float __x, float __y) __attribute__ ((__nothrow__ , __leaf__)); extern float __fdimf (float __x, float __y) __attribute__ ((__nothrow__ , __leaf__)); extern float fmaxf (float __x, float __y) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); extern float __fmaxf (float __x, float __y) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); extern float fminf (float __x, float __y) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); extern float __fminf (float __x, float __y) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); extern int __fpclassifyf (float __value) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); extern int __signbitf (float __value) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); extern float fmaf (float __x, float __y, float __z) __attribute__ ((__nothrow__ , __leaf__)); extern float __fmaf (float __x, float __y, float __z) __attribute__ ((__nothrow__ , __leaf__)); extern float scalbf (float __x, float __n) __attribute__ ((__nothrow__ , __leaf__)); extern float __scalbf (float __x, float __n) __attribute__ ((__nothrow__ , __leaf__)); # 90 "/usr/include/math.h" 2 3 4 # 136 "/usr/include/math.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/mathcalls.h" 1 3 4 # 52 "/usr/include/x86_64-linux-gnu/bits/mathcalls.h" 3 4 extern long double acosl (long double __x) __attribute__ ((__nothrow__ , __leaf__)); extern long double __acosl (long double __x) __attribute__ ((__nothrow__ , __leaf__)); extern long double asinl (long double __x) __attribute__ ((__nothrow__ , __leaf__)); extern long double __asinl (long double __x) __attribute__ ((__nothrow__ , __leaf__)); extern long double atanl (long double __x) __attribute__ ((__nothrow__ , __leaf__)); extern long double __atanl (long double __x) __attribute__ ((__nothrow__ , __leaf__)); extern long double atan2l (long double __y, long double __x) __attribute__ ((__nothrow__ , __leaf__)); extern long double __atan2l (long double __y, long double __x) __attribute__ ((__nothrow__ , __leaf__)); extern long double cosl (long double __x) __attribute__ ((__nothrow__ , __leaf__)); extern long double __cosl (long double __x) __attribute__ ((__nothrow__ , __leaf__)); extern long double sinl (long double __x) __attribute__ ((__nothrow__ , __leaf__)); extern long double __sinl (long double __x) __attribute__ ((__nothrow__ , __leaf__)); extern long double tanl (long double __x) __attribute__ ((__nothrow__ , __leaf__)); extern long double __tanl (long double __x) __attribute__ ((__nothrow__ , __leaf__)); extern long double coshl (long double __x) __attribute__ ((__nothrow__ , __leaf__)); extern long double __coshl (long double __x) __attribute__ ((__nothrow__ , __leaf__)); extern long double sinhl (long double __x) __attribute__ ((__nothrow__ , __leaf__)); extern long double __sinhl (long double __x) __attribute__ ((__nothrow__ , __leaf__)); extern long double tanhl (long double __x) __attribute__ ((__nothrow__ , __leaf__)); extern long double __tanhl (long double __x) __attribute__ ((__nothrow__ , __leaf__)); # 86 "/usr/include/x86_64-linux-gnu/bits/mathcalls.h" 3 4 extern long double acoshl (long double __x) __attribute__ ((__nothrow__ , __leaf__)); extern long double __acoshl (long double __x) __attribute__ ((__nothrow__ , __leaf__)); extern long double asinhl (long double __x) __attribute__ ((__nothrow__ , __leaf__)); extern long double __asinhl (long double __x) __attribute__ ((__nothrow__ , __leaf__)); extern long double atanhl (long double __x) __attribute__ ((__nothrow__ , __leaf__)); extern long double __atanhl (long double __x) __attribute__ ((__nothrow__ , __leaf__)); extern long double expl (long double __x) __attribute__ ((__nothrow__ , __leaf__)); extern long double __expl (long double __x) __attribute__ ((__nothrow__ , __leaf__)); extern long double frexpl (long double __x, int *__exponent) __attribute__ ((__nothrow__ , __leaf__)); extern long double __frexpl (long double __x, int *__exponent) __attribute__ ((__nothrow__ , __leaf__)); extern long double ldexpl (long double __x, int __exponent) __attribute__ ((__nothrow__ , __leaf__)); extern long double __ldexpl (long double __x, int __exponent) __attribute__ ((__nothrow__ , __leaf__)); extern long double logl (long double __x) __attribute__ ((__nothrow__ , __leaf__)); extern long double __logl (long double __x) __attribute__ ((__nothrow__ , __leaf__)); extern long double log10l (long double __x) __attribute__ ((__nothrow__ , __leaf__)); extern long double __log10l (long double __x) __attribute__ ((__nothrow__ , __leaf__)); extern long double modfl (long double __x, long double *__iptr) __attribute__ ((__nothrow__ , __leaf__)); extern long double __modfl (long double __x, long double *__iptr) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (2))); # 127 "/usr/include/x86_64-linux-gnu/bits/mathcalls.h" 3 4 extern long double expm1l (long double __x) __attribute__ ((__nothrow__ , __leaf__)); extern long double __expm1l (long double __x) __attribute__ ((__nothrow__ , __leaf__)); extern long double log1pl (long double __x) __attribute__ ((__nothrow__ , __leaf__)); extern long double __log1pl (long double __x) __attribute__ ((__nothrow__ , __leaf__)); extern long double logbl (long double __x) __attribute__ ((__nothrow__ , __leaf__)); extern long double __logbl (long double __x) __attribute__ ((__nothrow__ , __leaf__)); extern long double exp2l (long double __x) __attribute__ ((__nothrow__ , __leaf__)); extern long double __exp2l (long double __x) __attribute__ ((__nothrow__ , __leaf__)); extern long double log2l (long double __x) __attribute__ ((__nothrow__ , __leaf__)); extern long double __log2l (long double __x) __attribute__ ((__nothrow__ , __leaf__)); extern long double powl (long double __x, long double __y) __attribute__ ((__nothrow__ , __leaf__)); extern long double __powl (long double __x, long double __y) __attribute__ ((__nothrow__ , __leaf__)); extern long double sqrtl (long double __x) __attribute__ ((__nothrow__ , __leaf__)); extern long double __sqrtl (long double __x) __attribute__ ((__nothrow__ , __leaf__)); extern long double hypotl (long double __x, long double __y) __attribute__ ((__nothrow__ , __leaf__)); extern long double __hypotl (long double __x, long double __y) __attribute__ ((__nothrow__ , __leaf__)); extern long double cbrtl (long double __x) __attribute__ ((__nothrow__ , __leaf__)); extern long double __cbrtl (long double __x) __attribute__ ((__nothrow__ , __leaf__)); extern long double ceill (long double __x) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); extern long double __ceill (long double __x) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); extern long double fabsl (long double __x) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); extern long double __fabsl (long double __x) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); extern long double floorl (long double __x) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); extern long double __floorl (long double __x) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); extern long double fmodl (long double __x, long double __y) __attribute__ ((__nothrow__ , __leaf__)); extern long double __fmodl (long double __x, long double __y) __attribute__ ((__nothrow__ , __leaf__)); extern int __isinfl (long double __value) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); extern int __finitel (long double __value) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); extern int isinfl (long double __value) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); extern int finitel (long double __value) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); extern long double dreml (long double __x, long double __y) __attribute__ ((__nothrow__ , __leaf__)); extern long double __dreml (long double __x, long double __y) __attribute__ ((__nothrow__ , __leaf__)); extern long double significandl (long double __x) __attribute__ ((__nothrow__ , __leaf__)); extern long double __significandl (long double __x) __attribute__ ((__nothrow__ , __leaf__)); extern long double copysignl (long double __x, long double __y) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); extern long double __copysignl (long double __x, long double __y) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); extern long double nanl (const char *__tagb) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); extern long double __nanl (const char *__tagb) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); extern int __isnanl (long double __value) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); extern int isnanl (long double __value) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); extern long double j0l (long double) __attribute__ ((__nothrow__ , __leaf__)); extern long double __j0l (long double) __attribute__ ((__nothrow__ , __leaf__)); extern long double j1l (long double) __attribute__ ((__nothrow__ , __leaf__)); extern long double __j1l (long double) __attribute__ ((__nothrow__ , __leaf__)); extern long double jnl (int, long double) __attribute__ ((__nothrow__ , __leaf__)); extern long double __jnl (int, long double) __attribute__ ((__nothrow__ , __leaf__)); extern long double y0l (long double) __attribute__ ((__nothrow__ , __leaf__)); extern long double __y0l (long double) __attribute__ ((__nothrow__ , __leaf__)); extern long double y1l (long double) __attribute__ ((__nothrow__ , __leaf__)); extern long double __y1l (long double) __attribute__ ((__nothrow__ , __leaf__)); extern long double ynl (int, long double) __attribute__ ((__nothrow__ , __leaf__)); extern long double __ynl (int, long double) __attribute__ ((__nothrow__ , __leaf__)); extern long double erfl (long double) __attribute__ ((__nothrow__ , __leaf__)); extern long double __erfl (long double) __attribute__ ((__nothrow__ , __leaf__)); extern long double erfcl (long double) __attribute__ ((__nothrow__ , __leaf__)); extern long double __erfcl (long double) __attribute__ ((__nothrow__ , __leaf__)); extern long double lgammal (long double) __attribute__ ((__nothrow__ , __leaf__)); extern long double __lgammal (long double) __attribute__ ((__nothrow__ , __leaf__)); extern long double tgammal (long double) __attribute__ ((__nothrow__ , __leaf__)); extern long double __tgammal (long double) __attribute__ ((__nothrow__ , __leaf__)); extern long double gammal (long double) __attribute__ ((__nothrow__ , __leaf__)); extern long double __gammal (long double) __attribute__ ((__nothrow__ , __leaf__)); extern long double lgammal_r (long double, int *__signgamp) __attribute__ ((__nothrow__ , __leaf__)); extern long double __lgammal_r (long double, int *__signgamp) __attribute__ ((__nothrow__ , __leaf__)); extern long double rintl (long double __x) __attribute__ ((__nothrow__ , __leaf__)); extern long double __rintl (long double __x) __attribute__ ((__nothrow__ , __leaf__)); extern long double nextafterl (long double __x, long double __y) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); extern long double __nextafterl (long double __x, long double __y) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); extern long double nexttowardl (long double __x, long double __y) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); extern long double __nexttowardl (long double __x, long double __y) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); extern long double remainderl (long double __x, long double __y) __attribute__ ((__nothrow__ , __leaf__)); extern long double __remainderl (long double __x, long double __y) __attribute__ ((__nothrow__ , __leaf__)); extern long double scalbnl (long double __x, int __n) __attribute__ ((__nothrow__ , __leaf__)); extern long double __scalbnl (long double __x, int __n) __attribute__ ((__nothrow__ , __leaf__)); extern int ilogbl (long double __x) __attribute__ ((__nothrow__ , __leaf__)); extern int __ilogbl (long double __x) __attribute__ ((__nothrow__ , __leaf__)); extern long double scalblnl (long double __x, long int __n) __attribute__ ((__nothrow__ , __leaf__)); extern long double __scalblnl (long double __x, long int __n) __attribute__ ((__nothrow__ , __leaf__)); extern long double nearbyintl (long double __x) __attribute__ ((__nothrow__ , __leaf__)); extern long double __nearbyintl (long double __x) __attribute__ ((__nothrow__ , __leaf__)); extern long double roundl (long double __x) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); extern long double __roundl (long double __x) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); extern long double truncl (long double __x) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); extern long double __truncl (long double __x) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); extern long double remquol (long double __x, long double __y, int *__quo) __attribute__ ((__nothrow__ , __leaf__)); extern long double __remquol (long double __x, long double __y, int *__quo) __attribute__ ((__nothrow__ , __leaf__)); extern long int lrintl (long double __x) __attribute__ ((__nothrow__ , __leaf__)); extern long int __lrintl (long double __x) __attribute__ ((__nothrow__ , __leaf__)); extern long long int llrintl (long double __x) __attribute__ ((__nothrow__ , __leaf__)); extern long long int __llrintl (long double __x) __attribute__ ((__nothrow__ , __leaf__)); extern long int lroundl (long double __x) __attribute__ ((__nothrow__ , __leaf__)); extern long int __lroundl (long double __x) __attribute__ ((__nothrow__ , __leaf__)); extern long long int llroundl (long double __x) __attribute__ ((__nothrow__ , __leaf__)); extern long long int __llroundl (long double __x) __attribute__ ((__nothrow__ , __leaf__)); extern long double fdiml (long double __x, long double __y) __attribute__ ((__nothrow__ , __leaf__)); extern long double __fdiml (long double __x, long double __y) __attribute__ ((__nothrow__ , __leaf__)); extern long double fmaxl (long double __x, long double __y) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); extern long double __fmaxl (long double __x, long double __y) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); extern long double fminl (long double __x, long double __y) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); extern long double __fminl (long double __x, long double __y) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); extern int __fpclassifyl (long double __value) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); extern int __signbitl (long double __value) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); extern long double fmal (long double __x, long double __y, long double __z) __attribute__ ((__nothrow__ , __leaf__)); extern long double __fmal (long double __x, long double __y, long double __z) __attribute__ ((__nothrow__ , __leaf__)); extern long double scalbl (long double __x, long double __n) __attribute__ ((__nothrow__ , __leaf__)); extern long double __scalbl (long double __x, long double __n) __attribute__ ((__nothrow__ , __leaf__)); # 137 "/usr/include/math.h" 2 3 4 # 152 "/usr/include/math.h" 3 4 extern int signgam; # 193 "/usr/include/math.h" 3 4 enum { FP_NAN = 0, FP_INFINITE = 1, FP_ZERO = 2, FP_SUBNORMAL = 3, FP_NORMAL = 4 }; # 291 "/usr/include/math.h" 3 4 typedef enum { _IEEE_ = -1, _SVID_, _XOPEN_, _POSIX_, _ISOC_ } _LIB_VERSION_TYPE; extern _LIB_VERSION_TYPE _LIB_VERSION; # 316 "/usr/include/math.h" 3 4 struct exception { int type; char *name; double arg1; double arg2; double retval; }; extern int matherr (struct exception *__exc); # 478 "/usr/include/math.h" 3 4 # 3 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 Defined "HAVE_MATH_H" to "1" sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.headers/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -fPIC -g /tmp/petsc-U9YCMv/config.headers/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.headers/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -fPIC -g /tmp/petsc-U9YCMv/config.headers/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.headers/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.headers Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.headers/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.headers -o /tmp/petsc-U9YCMv/config.headers/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { double pi = M_PI; if (pi); ; return 0; } Found math #defines, like M_PI ================================================================================ TEST check from config.headers(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/socket.h sh: tau_cc.sh -E -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.headers /tmp/petsc-U9YCMv/config.headers/conftest.c Executing: tau_cc.sh -E -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.headers /tmp/petsc-U9YCMv/config.headers/conftest.c sh: # 1 "/tmp/petsc-U9YCMv/config.headers/conftest.c" # 1 "" # 1 "/tmp/petsc-U9YCMv/config.headers/conftest.c" # 1 "/tmp/petsc-U9YCMv/config.headers/confdefs.h" 1 # 2 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 # 1 "/tmp/petsc-U9YCMv/config.headers/conffix.h" 1 # 3 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 # 1 "/usr/include/x86_64-linux-gnu/sys/socket.h" 1 3 4 # 23 "/usr/include/x86_64-linux-gnu/sys/socket.h" 3 4 # 1 "/usr/include/features.h" 1 3 4 # 341 "/usr/include/features.h" 3 4 # 1 "/usr/include/stdc-predef.h" 1 3 4 # 30 "/usr/include/stdc-predef.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/predefs.h" 1 3 4 # 31 "/usr/include/stdc-predef.h" 2 3 4 # 342 "/usr/include/features.h" 2 3 4 # 371 "/usr/include/features.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/sys/cdefs.h" 1 3 4 # 385 "/usr/include/x86_64-linux-gnu/sys/cdefs.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/wordsize.h" 1 3 4 # 386 "/usr/include/x86_64-linux-gnu/sys/cdefs.h" 2 3 4 # 372 "/usr/include/features.h" 2 3 4 # 395 "/usr/include/features.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/gnu/stubs.h" 1 3 4 # 10 "/usr/include/x86_64-linux-gnu/gnu/stubs.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/gnu/stubs-64.h" 1 3 4 # 11 "/usr/include/x86_64-linux-gnu/gnu/stubs.h" 2 3 4 # 396 "/usr/include/features.h" 2 3 4 # 24 "/usr/include/x86_64-linux-gnu/sys/socket.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/sys/uio.h" 1 3 4 # 24 "/usr/include/x86_64-linux-gnu/sys/uio.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/sys/types.h" 1 3 4 # 27 "/usr/include/x86_64-linux-gnu/sys/types.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/types.h" 1 3 4 # 27 "/usr/include/x86_64-linux-gnu/bits/types.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/wordsize.h" 1 3 4 # 28 "/usr/include/x86_64-linux-gnu/bits/types.h" 2 3 4 typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; # 130 "/usr/include/x86_64-linux-gnu/bits/types.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/typesizes.h" 1 3 4 # 131 "/usr/include/x86_64-linux-gnu/bits/types.h" 2 3 4 typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned long int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef long int __suseconds_t; typedef int __daddr_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __fsword_t; typedef long int __ssize_t; typedef long int __syscall_slong_t; typedef unsigned long int __syscall_ulong_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; # 30 "/usr/include/x86_64-linux-gnu/sys/types.h" 2 3 4 typedef __u_char u_char; typedef __u_short u_short; typedef __u_int u_int; typedef __u_long u_long; typedef __quad_t quad_t; typedef __u_quad_t u_quad_t; typedef __fsid_t fsid_t; typedef __loff_t loff_t; typedef __ino_t ino_t; # 60 "/usr/include/x86_64-linux-gnu/sys/types.h" 3 4 typedef __dev_t dev_t; typedef __gid_t gid_t; typedef __mode_t mode_t; typedef __nlink_t nlink_t; typedef __uid_t uid_t; typedef __off_t off_t; # 98 "/usr/include/x86_64-linux-gnu/sys/types.h" 3 4 typedef __pid_t pid_t; typedef __id_t id_t; typedef __ssize_t ssize_t; typedef __daddr_t daddr_t; typedef __caddr_t caddr_t; typedef __key_t key_t; # 132 "/usr/include/x86_64-linux-gnu/sys/types.h" 3 4 # 1 "/usr/include/time.h" 1 3 4 # 57 "/usr/include/time.h" 3 4 typedef __clock_t clock_t; # 73 "/usr/include/time.h" 3 4 typedef __time_t time_t; # 91 "/usr/include/time.h" 3 4 typedef __clockid_t clockid_t; # 103 "/usr/include/time.h" 3 4 typedef __timer_t timer_t; # 133 "/usr/include/x86_64-linux-gnu/sys/types.h" 2 3 4 # 146 "/usr/include/x86_64-linux-gnu/sys/types.h" 3 4 # 1 "/usr/lib/gcc/x86_64-linux-gnu/4.7/include/stddef.h" 1 3 4 # 213 "/usr/lib/gcc/x86_64-linux-gnu/4.7/include/stddef.h" 3 4 typedef long unsigned int size_t; # 147 "/usr/include/x86_64-linux-gnu/sys/types.h" 2 3 4 typedef unsigned long int ulong; typedef unsigned short int ushort; typedef unsigned int uint; # 194 "/usr/include/x86_64-linux-gnu/sys/types.h" 3 4 typedef int int8_t __attribute__ ((__mode__ (__QI__))); typedef int int16_t __attribute__ ((__mode__ (__HI__))); typedef int int32_t __attribute__ ((__mode__ (__SI__))); typedef int int64_t __attribute__ ((__mode__ (__DI__))); typedef unsigned int u_int8_t __attribute__ ((__mode__ (__QI__))); typedef unsigned int u_int16_t __attribute__ ((__mode__ (__HI__))); typedef unsigned int u_int32_t __attribute__ ((__mode__ (__SI__))); typedef unsigned int u_int64_t __attribute__ ((__mode__ (__DI__))); typedef int register_t __attribute__ ((__mode__ (__word__))); # 216 "/usr/include/x86_64-linux-gnu/sys/types.h" 3 4 # 1 "/usr/include/endian.h" 1 3 4 # 36 "/usr/include/endian.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/endian.h" 1 3 4 # 37 "/usr/include/endian.h" 2 3 4 # 60 "/usr/include/endian.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/byteswap.h" 1 3 4 # 28 "/usr/include/x86_64-linux-gnu/bits/byteswap.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/wordsize.h" 1 3 4 # 29 "/usr/include/x86_64-linux-gnu/bits/byteswap.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/byteswap-16.h" 1 3 4 # 36 "/usr/include/x86_64-linux-gnu/bits/byteswap.h" 2 3 4 # 44 "/usr/include/x86_64-linux-gnu/bits/byteswap.h" 3 4 static __inline unsigned int __bswap_32 (unsigned int __bsx) { return __builtin_bswap32 (__bsx); } # 108 "/usr/include/x86_64-linux-gnu/bits/byteswap.h" 3 4 static __inline __uint64_t __bswap_64 (__uint64_t __bsx) { return __builtin_bswap64 (__bsx); } # 61 "/usr/include/endian.h" 2 3 4 # 217 "/usr/include/x86_64-linux-gnu/sys/types.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/sys/select.h" 1 3 4 # 30 "/usr/include/x86_64-linux-gnu/sys/select.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/select.h" 1 3 4 # 22 "/usr/include/x86_64-linux-gnu/bits/select.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/wordsize.h" 1 3 4 # 23 "/usr/include/x86_64-linux-gnu/bits/select.h" 2 3 4 # 31 "/usr/include/x86_64-linux-gnu/sys/select.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/sigset.h" 1 3 4 # 23 "/usr/include/x86_64-linux-gnu/bits/sigset.h" 3 4 typedef int __sig_atomic_t; typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; # 34 "/usr/include/x86_64-linux-gnu/sys/select.h" 2 3 4 typedef __sigset_t sigset_t; # 1 "/usr/include/time.h" 1 3 4 # 120 "/usr/include/time.h" 3 4 struct timespec { __time_t tv_sec; __syscall_slong_t tv_nsec; }; # 44 "/usr/include/x86_64-linux-gnu/sys/select.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/time.h" 1 3 4 # 30 "/usr/include/x86_64-linux-gnu/bits/time.h" 3 4 struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; # 46 "/usr/include/x86_64-linux-gnu/sys/select.h" 2 3 4 typedef __suseconds_t suseconds_t; typedef long int __fd_mask; # 64 "/usr/include/x86_64-linux-gnu/sys/select.h" 3 4 typedef struct { __fd_mask __fds_bits[1024 / (8 * (int) sizeof (__fd_mask))]; } fd_set; typedef __fd_mask fd_mask; # 96 "/usr/include/x86_64-linux-gnu/sys/select.h" 3 4 # 106 "/usr/include/x86_64-linux-gnu/sys/select.h" 3 4 extern int select (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, struct timeval *__restrict __timeout); # 118 "/usr/include/x86_64-linux-gnu/sys/select.h" 3 4 extern int pselect (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, const struct timespec *__restrict __timeout, const __sigset_t *__restrict __sigmask); # 131 "/usr/include/x86_64-linux-gnu/sys/select.h" 3 4 # 220 "/usr/include/x86_64-linux-gnu/sys/types.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/sys/sysmacros.h" 1 3 4 # 29 "/usr/include/x86_64-linux-gnu/sys/sysmacros.h" 3 4 __extension__ extern unsigned int gnu_dev_major (unsigned long long int __dev) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); __extension__ extern unsigned int gnu_dev_minor (unsigned long long int __dev) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); __extension__ extern unsigned long long int gnu_dev_makedev (unsigned int __major, unsigned int __minor) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); # 63 "/usr/include/x86_64-linux-gnu/sys/sysmacros.h" 3 4 # 223 "/usr/include/x86_64-linux-gnu/sys/types.h" 2 3 4 typedef __blksize_t blksize_t; typedef __blkcnt_t blkcnt_t; typedef __fsblkcnt_t fsblkcnt_t; typedef __fsfilcnt_t fsfilcnt_t; # 270 "/usr/include/x86_64-linux-gnu/sys/types.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/pthreadtypes.h" 1 3 4 # 21 "/usr/include/x86_64-linux-gnu/bits/pthreadtypes.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/wordsize.h" 1 3 4 # 22 "/usr/include/x86_64-linux-gnu/bits/pthreadtypes.h" 2 3 4 # 60 "/usr/include/x86_64-linux-gnu/bits/pthreadtypes.h" 3 4 typedef unsigned long int pthread_t; union pthread_attr_t { char __size[56]; long int __align; }; typedef union pthread_attr_t pthread_attr_t; typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; # 90 "/usr/include/x86_64-linux-gnu/bits/pthreadtypes.h" 3 4 typedef union { struct __pthread_mutex_s { int __lock; unsigned int __count; int __owner; unsigned int __nusers; int __kind; int __spins; __pthread_list_t __list; # 115 "/usr/include/x86_64-linux-gnu/bits/pthreadtypes.h" 3 4 } __data; char __size[40]; long int __align; } pthread_mutex_t; typedef union { char __size[4]; int __align; } pthread_mutexattr_t; typedef union { struct { int __lock; unsigned int __futex; __extension__ unsigned long long int __total_seq; __extension__ unsigned long long int __wakeup_seq; __extension__ unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; __extension__ long long int __align; } pthread_cond_t; typedef union { char __size[4]; int __align; } pthread_condattr_t; typedef unsigned int pthread_key_t; typedef int pthread_once_t; typedef union { struct { int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; unsigned int __flags; } __data; # 202 "/usr/include/x86_64-linux-gnu/bits/pthreadtypes.h" 3 4 char __size[56]; long int __align; } pthread_rwlock_t; typedef union { char __size[8]; long int __align; } pthread_rwlockattr_t; typedef volatile int pthread_spinlock_t; typedef union { char __size[32]; long int __align; } pthread_barrier_t; typedef union { char __size[4]; int __align; } pthread_barrierattr_t; # 271 "/usr/include/x86_64-linux-gnu/sys/types.h" 2 3 4 # 25 "/usr/include/x86_64-linux-gnu/sys/uio.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/uio.h" 1 3 4 # 43 "/usr/include/x86_64-linux-gnu/bits/uio.h" 3 4 struct iovec { void *iov_base; size_t iov_len; }; # 30 "/usr/include/x86_64-linux-gnu/sys/uio.h" 2 3 4 # 40 "/usr/include/x86_64-linux-gnu/sys/uio.h" 3 4 extern ssize_t readv (int __fd, const struct iovec *__iovec, int __count) ; # 51 "/usr/include/x86_64-linux-gnu/sys/uio.h" 3 4 extern ssize_t writev (int __fd, const struct iovec *__iovec, int __count) ; # 66 "/usr/include/x86_64-linux-gnu/sys/uio.h" 3 4 extern ssize_t preadv (int __fd, const struct iovec *__iovec, int __count, __off_t __offset) ; # 78 "/usr/include/x86_64-linux-gnu/sys/uio.h" 3 4 extern ssize_t pwritev (int __fd, const struct iovec *__iovec, int __count, __off_t __offset) ; # 121 "/usr/include/x86_64-linux-gnu/sys/uio.h" 3 4 # 28 "/usr/include/x86_64-linux-gnu/sys/socket.h" 2 3 4 # 1 "/usr/lib/gcc/x86_64-linux-gnu/4.7/include/stddef.h" 1 3 4 # 30 "/usr/include/x86_64-linux-gnu/sys/socket.h" 2 3 4 # 39 "/usr/include/x86_64-linux-gnu/sys/socket.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/socket.h" 1 3 4 # 27 "/usr/include/x86_64-linux-gnu/bits/socket.h" 3 4 # 1 "/usr/lib/gcc/x86_64-linux-gnu/4.7/include/stddef.h" 1 3 4 # 28 "/usr/include/x86_64-linux-gnu/bits/socket.h" 2 3 4 typedef __socklen_t socklen_t; # 1 "/usr/include/x86_64-linux-gnu/bits/socket_type.h" 1 3 4 # 24 "/usr/include/x86_64-linux-gnu/bits/socket_type.h" 3 4 enum __socket_type { SOCK_STREAM = 1, SOCK_DGRAM = 2, SOCK_RAW = 3, SOCK_RDM = 4, SOCK_SEQPACKET = 5, SOCK_DCCP = 6, SOCK_PACKET = 10, SOCK_CLOEXEC = 02000000, SOCK_NONBLOCK = 00004000 }; # 39 "/usr/include/x86_64-linux-gnu/bits/socket.h" 2 3 4 # 144 "/usr/include/x86_64-linux-gnu/bits/socket.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/sockaddr.h" 1 3 4 # 28 "/usr/include/x86_64-linux-gnu/bits/sockaddr.h" 3 4 typedef unsigned short int sa_family_t; # 145 "/usr/include/x86_64-linux-gnu/bits/socket.h" 2 3 4 struct sockaddr { sa_family_t sa_family; char sa_data[14]; }; # 160 "/usr/include/x86_64-linux-gnu/bits/socket.h" 3 4 struct sockaddr_storage { sa_family_t ss_family; unsigned long int __ss_align; char __ss_padding[(128 - (2 * sizeof (unsigned long int)))]; }; enum { MSG_OOB = 0x01, MSG_PEEK = 0x02, MSG_DONTROUTE = 0x04, MSG_CTRUNC = 0x08, MSG_PROXY = 0x10, MSG_TRUNC = 0x20, MSG_DONTWAIT = 0x40, MSG_EOR = 0x80, MSG_WAITALL = 0x100, MSG_FIN = 0x200, MSG_SYN = 0x400, MSG_CONFIRM = 0x800, MSG_RST = 0x1000, MSG_ERRQUEUE = 0x2000, MSG_NOSIGNAL = 0x4000, MSG_MORE = 0x8000, MSG_WAITFORONE = 0x10000, MSG_FASTOPEN = 0x20000000, MSG_CMSG_CLOEXEC = 0x40000000 }; struct msghdr { void *msg_name; socklen_t msg_namelen; struct iovec *msg_iov; size_t msg_iovlen; void *msg_control; size_t msg_controllen; int msg_flags; }; struct cmsghdr { size_t cmsg_len; int cmsg_level; int cmsg_type; __extension__ unsigned char __cmsg_data []; }; # 270 "/usr/include/x86_64-linux-gnu/bits/socket.h" 3 4 extern struct cmsghdr *__cmsg_nxthdr (struct msghdr *__mhdr, struct cmsghdr *__cmsg) __attribute__ ((__nothrow__ , __leaf__)); # 297 "/usr/include/x86_64-linux-gnu/bits/socket.h" 3 4 enum { SCM_RIGHTS = 0x01 }; # 343 "/usr/include/x86_64-linux-gnu/bits/socket.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/asm/socket.h" 1 3 4 # 1 "/usr/include/asm-generic/socket.h" 1 3 4 # 1 "/usr/include/x86_64-linux-gnu/asm/sockios.h" 1 3 4 # 1 "/usr/include/asm-generic/sockios.h" 1 3 4 # 1 "/usr/include/x86_64-linux-gnu/asm/sockios.h" 2 3 4 # 5 "/usr/include/asm-generic/socket.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/asm/socket.h" 2 3 4 # 344 "/usr/include/x86_64-linux-gnu/bits/socket.h" 2 3 4 # 377 "/usr/include/x86_64-linux-gnu/bits/socket.h" 3 4 struct linger { int l_onoff; int l_linger; }; # 40 "/usr/include/x86_64-linux-gnu/sys/socket.h" 2 3 4 struct osockaddr { unsigned short int sa_family; unsigned char sa_data[14]; }; enum { SHUT_RD = 0, SHUT_WR, SHUT_RDWR }; # 114 "/usr/include/x86_64-linux-gnu/sys/socket.h" 3 4 extern int socket (int __domain, int __type, int __protocol) __attribute__ ((__nothrow__ , __leaf__)); extern int socketpair (int __domain, int __type, int __protocol, int __fds[2]) __attribute__ ((__nothrow__ , __leaf__)); extern int bind (int __fd, const struct sockaddr * __addr, socklen_t __len) __attribute__ ((__nothrow__ , __leaf__)); extern int getsockname (int __fd, struct sockaddr *__restrict __addr, socklen_t *__restrict __len) __attribute__ ((__nothrow__ , __leaf__)); # 138 "/usr/include/x86_64-linux-gnu/sys/socket.h" 3 4 extern int connect (int __fd, const struct sockaddr * __addr, socklen_t __len); extern int getpeername (int __fd, struct sockaddr *__restrict __addr, socklen_t *__restrict __len) __attribute__ ((__nothrow__ , __leaf__)); extern ssize_t send (int __fd, const void *__buf, size_t __n, int __flags); extern ssize_t recv (int __fd, void *__buf, size_t __n, int __flags); extern ssize_t sendto (int __fd, const void *__buf, size_t __n, int __flags, const struct sockaddr * __addr, socklen_t __addr_len); # 175 "/usr/include/x86_64-linux-gnu/sys/socket.h" 3 4 extern ssize_t recvfrom (int __fd, void *__restrict __buf, size_t __n, int __flags, struct sockaddr *__restrict __addr, socklen_t *__restrict __addr_len); extern ssize_t sendmsg (int __fd, const struct msghdr *__message, int __flags); # 203 "/usr/include/x86_64-linux-gnu/sys/socket.h" 3 4 extern ssize_t recvmsg (int __fd, struct msghdr *__message, int __flags); # 220 "/usr/include/x86_64-linux-gnu/sys/socket.h" 3 4 extern int getsockopt (int __fd, int __level, int __optname, void *__restrict __optval, socklen_t *__restrict __optlen) __attribute__ ((__nothrow__ , __leaf__)); extern int setsockopt (int __fd, int __level, int __optname, const void *__optval, socklen_t __optlen) __attribute__ ((__nothrow__ , __leaf__)); extern int listen (int __fd, int __n) __attribute__ ((__nothrow__ , __leaf__)); # 244 "/usr/include/x86_64-linux-gnu/sys/socket.h" 3 4 extern int accept (int __fd, struct sockaddr *__restrict __addr, socklen_t *__restrict __addr_len); # 262 "/usr/include/x86_64-linux-gnu/sys/socket.h" 3 4 extern int shutdown (int __fd, int __how) __attribute__ ((__nothrow__ , __leaf__)); extern int sockatmark (int __fd) __attribute__ ((__nothrow__ , __leaf__)); extern int isfdtype (int __fd, int __fdtype) __attribute__ ((__nothrow__ , __leaf__)); # 284 "/usr/include/x86_64-linux-gnu/sys/socket.h" 3 4 # 3 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 Defined "HAVE_SYS_SOCKET_H" to "1" ================================================================================ TEST check from config.headers(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/types.h sh: tau_cc.sh -E -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.headers /tmp/petsc-U9YCMv/config.headers/conftest.c Executing: tau_cc.sh -E -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.headers /tmp/petsc-U9YCMv/config.headers/conftest.c sh: # 1 "/tmp/petsc-U9YCMv/config.headers/conftest.c" # 1 "" # 1 "/tmp/petsc-U9YCMv/config.headers/conftest.c" # 1 "/tmp/petsc-U9YCMv/config.headers/confdefs.h" 1 # 2 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 # 1 "/tmp/petsc-U9YCMv/config.headers/conffix.h" 1 # 3 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 # 1 "/usr/include/x86_64-linux-gnu/sys/types.h" 1 3 4 # 25 "/usr/include/x86_64-linux-gnu/sys/types.h" 3 4 # 1 "/usr/include/features.h" 1 3 4 # 341 "/usr/include/features.h" 3 4 # 1 "/usr/include/stdc-predef.h" 1 3 4 # 30 "/usr/include/stdc-predef.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/predefs.h" 1 3 4 # 31 "/usr/include/stdc-predef.h" 2 3 4 # 342 "/usr/include/features.h" 2 3 4 # 371 "/usr/include/features.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/sys/cdefs.h" 1 3 4 # 385 "/usr/include/x86_64-linux-gnu/sys/cdefs.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/wordsize.h" 1 3 4 # 386 "/usr/include/x86_64-linux-gnu/sys/cdefs.h" 2 3 4 # 372 "/usr/include/features.h" 2 3 4 # 395 "/usr/include/features.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/gnu/stubs.h" 1 3 4 # 10 "/usr/include/x86_64-linux-gnu/gnu/stubs.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/gnu/stubs-64.h" 1 3 4 # 11 "/usr/include/x86_64-linux-gnu/gnu/stubs.h" 2 3 4 # 396 "/usr/include/features.h" 2 3 4 # 26 "/usr/include/x86_64-linux-gnu/sys/types.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/types.h" 1 3 4 # 27 "/usr/include/x86_64-linux-gnu/bits/types.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/wordsize.h" 1 3 4 # 28 "/usr/include/x86_64-linux-gnu/bits/types.h" 2 3 4 typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; # 130 "/usr/include/x86_64-linux-gnu/bits/types.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/typesizes.h" 1 3 4 # 131 "/usr/include/x86_64-linux-gnu/bits/types.h" 2 3 4 typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned long int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef long int __suseconds_t; typedef int __daddr_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __fsword_t; typedef long int __ssize_t; typedef long int __syscall_slong_t; typedef unsigned long int __syscall_ulong_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; # 30 "/usr/include/x86_64-linux-gnu/sys/types.h" 2 3 4 typedef __u_char u_char; typedef __u_short u_short; typedef __u_int u_int; typedef __u_long u_long; typedef __quad_t quad_t; typedef __u_quad_t u_quad_t; typedef __fsid_t fsid_t; typedef __loff_t loff_t; typedef __ino_t ino_t; # 60 "/usr/include/x86_64-linux-gnu/sys/types.h" 3 4 typedef __dev_t dev_t; typedef __gid_t gid_t; typedef __mode_t mode_t; typedef __nlink_t nlink_t; typedef __uid_t uid_t; typedef __off_t off_t; # 98 "/usr/include/x86_64-linux-gnu/sys/types.h" 3 4 typedef __pid_t pid_t; typedef __id_t id_t; typedef __ssize_t ssize_t; typedef __daddr_t daddr_t; typedef __caddr_t caddr_t; typedef __key_t key_t; # 132 "/usr/include/x86_64-linux-gnu/sys/types.h" 3 4 # 1 "/usr/include/time.h" 1 3 4 # 57 "/usr/include/time.h" 3 4 typedef __clock_t clock_t; # 73 "/usr/include/time.h" 3 4 typedef __time_t time_t; # 91 "/usr/include/time.h" 3 4 typedef __clockid_t clockid_t; # 103 "/usr/include/time.h" 3 4 typedef __timer_t timer_t; # 133 "/usr/include/x86_64-linux-gnu/sys/types.h" 2 3 4 # 146 "/usr/include/x86_64-linux-gnu/sys/types.h" 3 4 # 1 "/usr/lib/gcc/x86_64-linux-gnu/4.7/include/stddef.h" 1 3 4 # 213 "/usr/lib/gcc/x86_64-linux-gnu/4.7/include/stddef.h" 3 4 typedef long unsigned int size_t; # 147 "/usr/include/x86_64-linux-gnu/sys/types.h" 2 3 4 typedef unsigned long int ulong; typedef unsigned short int ushort; typedef unsigned int uint; # 194 "/usr/include/x86_64-linux-gnu/sys/types.h" 3 4 typedef int int8_t __attribute__ ((__mode__ (__QI__))); typedef int int16_t __attribute__ ((__mode__ (__HI__))); typedef int int32_t __attribute__ ((__mode__ (__SI__))); typedef int int64_t __attribute__ ((__mode__ (__DI__))); typedef unsigned int u_int8_t __attribute__ ((__mode__ (__QI__))); typedef unsigned int u_int16_t __attribute__ ((__mode__ (__HI__))); typedef unsigned int u_int32_t __attribute__ ((__mode__ (__SI__))); typedef unsigned int u_int64_t __attribute__ ((__mode__ (__DI__))); typedef int register_t __attribute__ ((__mode__ (__word__))); # 216 "/usr/include/x86_64-linux-gnu/sys/types.h" 3 4 # 1 "/usr/include/endian.h" 1 3 4 # 36 "/usr/include/endian.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/endian.h" 1 3 4 # 37 "/usr/include/endian.h" 2 3 4 # 60 "/usr/include/endian.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/byteswap.h" 1 3 4 # 28 "/usr/include/x86_64-linux-gnu/bits/byteswap.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/wordsize.h" 1 3 4 # 29 "/usr/include/x86_64-linux-gnu/bits/byteswap.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/byteswap-16.h" 1 3 4 # 36 "/usr/include/x86_64-linux-gnu/bits/byteswap.h" 2 3 4 # 44 "/usr/include/x86_64-linux-gnu/bits/byteswap.h" 3 4 static __inline unsigned int __bswap_32 (unsigned int __bsx) { return __builtin_bswap32 (__bsx); } # 108 "/usr/include/x86_64-linux-gnu/bits/byteswap.h" 3 4 static __inline __uint64_t __bswap_64 (__uint64_t __bsx) { return __builtin_bswap64 (__bsx); } # 61 "/usr/include/endian.h" 2 3 4 # 217 "/usr/include/x86_64-linux-gnu/sys/types.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/sys/select.h" 1 3 4 # 30 "/usr/include/x86_64-linux-gnu/sys/select.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/select.h" 1 3 4 # 22 "/usr/include/x86_64-linux-gnu/bits/select.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/wordsize.h" 1 3 4 # 23 "/usr/include/x86_64-linux-gnu/bits/select.h" 2 3 4 # 31 "/usr/include/x86_64-linux-gnu/sys/select.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/sigset.h" 1 3 4 # 23 "/usr/include/x86_64-linux-gnu/bits/sigset.h" 3 4 typedef int __sig_atomic_t; typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; # 34 "/usr/include/x86_64-linux-gnu/sys/select.h" 2 3 4 typedef __sigset_t sigset_t; # 1 "/usr/include/time.h" 1 3 4 # 120 "/usr/include/time.h" 3 4 struct timespec { __time_t tv_sec; __syscall_slong_t tv_nsec; }; # 44 "/usr/include/x86_64-linux-gnu/sys/select.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/time.h" 1 3 4 # 30 "/usr/include/x86_64-linux-gnu/bits/time.h" 3 4 struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; # 46 "/usr/include/x86_64-linux-gnu/sys/select.h" 2 3 4 typedef __suseconds_t suseconds_t; typedef long int __fd_mask; # 64 "/usr/include/x86_64-linux-gnu/sys/select.h" 3 4 typedef struct { __fd_mask __fds_bits[1024 / (8 * (int) sizeof (__fd_mask))]; } fd_set; typedef __fd_mask fd_mask; # 96 "/usr/include/x86_64-linux-gnu/sys/select.h" 3 4 # 106 "/usr/include/x86_64-linux-gnu/sys/select.h" 3 4 extern int select (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, struct timeval *__restrict __timeout); # 118 "/usr/include/x86_64-linux-gnu/sys/select.h" 3 4 extern int pselect (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, const struct timespec *__restrict __timeout, const __sigset_t *__restrict __sigmask); # 131 "/usr/include/x86_64-linux-gnu/sys/select.h" 3 4 # 220 "/usr/include/x86_64-linux-gnu/sys/types.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/sys/sysmacros.h" 1 3 4 # 29 "/usr/include/x86_64-linux-gnu/sys/sysmacros.h" 3 4 __extension__ extern unsigned int gnu_dev_major (unsigned long long int __dev) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); __extension__ extern unsigned int gnu_dev_minor (unsigned long long int __dev) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); __extension__ extern unsigned long long int gnu_dev_makedev (unsigned int __major, unsigned int __minor) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); # 63 "/usr/include/x86_64-linux-gnu/sys/sysmacros.h" 3 4 # 223 "/usr/include/x86_64-linux-gnu/sys/types.h" 2 3 4 typedef __blksize_t blksize_t; typedef __blkcnt_t blkcnt_t; typedef __fsblkcnt_t fsblkcnt_t; typedef __fsfilcnt_t fsfilcnt_t; # 270 "/usr/include/x86_64-linux-gnu/sys/types.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/pthreadtypes.h" 1 3 4 # 21 "/usr/include/x86_64-linux-gnu/bits/pthreadtypes.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/wordsize.h" 1 3 4 # 22 "/usr/include/x86_64-linux-gnu/bits/pthreadtypes.h" 2 3 4 # 60 "/usr/include/x86_64-linux-gnu/bits/pthreadtypes.h" 3 4 typedef unsigned long int pthread_t; union pthread_attr_t { char __size[56]; long int __align; }; typedef union pthread_attr_t pthread_attr_t; typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; # 90 "/usr/include/x86_64-linux-gnu/bits/pthreadtypes.h" 3 4 typedef union { struct __pthread_mutex_s { int __lock; unsigned int __count; int __owner; unsigned int __nusers; int __kind; int __spins; __pthread_list_t __list; # 115 "/usr/include/x86_64-linux-gnu/bits/pthreadtypes.h" 3 4 } __data; char __size[40]; long int __align; } pthread_mutex_t; typedef union { char __size[4]; int __align; } pthread_mutexattr_t; typedef union { struct { int __lock; unsigned int __futex; __extension__ unsigned long long int __total_seq; __extension__ unsigned long long int __wakeup_seq; __extension__ unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; __extension__ long long int __align; } pthread_cond_t; typedef union { char __size[4]; int __align; } pthread_condattr_t; typedef unsigned int pthread_key_t; typedef int pthread_once_t; typedef union { struct { int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; unsigned int __flags; } __data; # 202 "/usr/include/x86_64-linux-gnu/bits/pthreadtypes.h" 3 4 char __size[56]; long int __align; } pthread_rwlock_t; typedef union { char __size[8]; long int __align; } pthread_rwlockattr_t; typedef volatile int pthread_spinlock_t; typedef union { char __size[32]; long int __align; } pthread_barrier_t; typedef union { char __size[4]; int __align; } pthread_barrierattr_t; # 271 "/usr/include/x86_64-linux-gnu/sys/types.h" 2 3 4 # 3 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 Defined "HAVE_SYS_TYPES_H" to "1" ================================================================================ TEST check from config.headers(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: malloc.h sh: tau_cc.sh -E -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.headers /tmp/petsc-U9YCMv/config.headers/conftest.c Executing: tau_cc.sh -E -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.headers /tmp/petsc-U9YCMv/config.headers/conftest.c sh: # 1 "/tmp/petsc-U9YCMv/config.headers/conftest.c" # 1 "" # 1 "/tmp/petsc-U9YCMv/config.headers/conftest.c" # 1 "/tmp/petsc-U9YCMv/config.headers/confdefs.h" 1 # 2 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 # 1 "/tmp/petsc-U9YCMv/config.headers/conffix.h" 1 # 3 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 # 1 "/usr/include/malloc.h" 1 3 4 # 23 "/usr/include/malloc.h" 3 4 # 1 "/usr/include/features.h" 1 3 4 # 341 "/usr/include/features.h" 3 4 # 1 "/usr/include/stdc-predef.h" 1 3 4 # 30 "/usr/include/stdc-predef.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/predefs.h" 1 3 4 # 31 "/usr/include/stdc-predef.h" 2 3 4 # 342 "/usr/include/features.h" 2 3 4 # 371 "/usr/include/features.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/sys/cdefs.h" 1 3 4 # 385 "/usr/include/x86_64-linux-gnu/sys/cdefs.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/wordsize.h" 1 3 4 # 386 "/usr/include/x86_64-linux-gnu/sys/cdefs.h" 2 3 4 # 372 "/usr/include/features.h" 2 3 4 # 395 "/usr/include/features.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/gnu/stubs.h" 1 3 4 # 10 "/usr/include/x86_64-linux-gnu/gnu/stubs.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/gnu/stubs-64.h" 1 3 4 # 11 "/usr/include/x86_64-linux-gnu/gnu/stubs.h" 2 3 4 # 396 "/usr/include/features.h" 2 3 4 # 24 "/usr/include/malloc.h" 2 3 4 # 1 "/usr/lib/gcc/x86_64-linux-gnu/4.7/include/stddef.h" 1 3 4 # 150 "/usr/lib/gcc/x86_64-linux-gnu/4.7/include/stddef.h" 3 4 typedef long int ptrdiff_t; # 213 "/usr/lib/gcc/x86_64-linux-gnu/4.7/include/stddef.h" 3 4 typedef long unsigned int size_t; # 325 "/usr/lib/gcc/x86_64-linux-gnu/4.7/include/stddef.h" 3 4 typedef int wchar_t; # 25 "/usr/include/malloc.h" 2 3 4 # 1 "/usr/include/stdio.h" 1 3 4 # 29 "/usr/include/stdio.h" 3 4 # 1 "/usr/lib/gcc/x86_64-linux-gnu/4.7/include/stddef.h" 1 3 4 # 34 "/usr/include/stdio.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/types.h" 1 3 4 # 27 "/usr/include/x86_64-linux-gnu/bits/types.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/wordsize.h" 1 3 4 # 28 "/usr/include/x86_64-linux-gnu/bits/types.h" 2 3 4 typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; # 130 "/usr/include/x86_64-linux-gnu/bits/types.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/typesizes.h" 1 3 4 # 131 "/usr/include/x86_64-linux-gnu/bits/types.h" 2 3 4 typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned long int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef long int __suseconds_t; typedef int __daddr_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __fsword_t; typedef long int __ssize_t; typedef long int __syscall_slong_t; typedef unsigned long int __syscall_ulong_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; # 36 "/usr/include/stdio.h" 2 3 4 # 44 "/usr/include/stdio.h" 3 4 struct _IO_FILE; typedef struct _IO_FILE FILE; # 64 "/usr/include/stdio.h" 3 4 typedef struct _IO_FILE __FILE; # 74 "/usr/include/stdio.h" 3 4 # 1 "/usr/include/libio.h" 1 3 4 # 32 "/usr/include/libio.h" 3 4 # 1 "/usr/include/_G_config.h" 1 3 4 # 15 "/usr/include/_G_config.h" 3 4 # 1 "/usr/lib/gcc/x86_64-linux-gnu/4.7/include/stddef.h" 1 3 4 # 16 "/usr/include/_G_config.h" 2 3 4 # 1 "/usr/include/wchar.h" 1 3 4 # 82 "/usr/include/wchar.h" 3 4 typedef struct { int __count; union { unsigned int __wch; char __wchb[4]; } __value; } __mbstate_t; # 21 "/usr/include/_G_config.h" 2 3 4 typedef struct { __off_t __pos; __mbstate_t __state; } _G_fpos_t; typedef struct { __off64_t __pos; __mbstate_t __state; } _G_fpos64_t; # 33 "/usr/include/libio.h" 2 3 4 # 50 "/usr/include/libio.h" 3 4 # 1 "/usr/lib/gcc/x86_64-linux-gnu/4.7/include/stdarg.h" 1 3 4 # 40 "/usr/lib/gcc/x86_64-linux-gnu/4.7/include/stdarg.h" 3 4 typedef __builtin_va_list __gnuc_va_list; # 51 "/usr/include/libio.h" 2 3 4 # 145 "/usr/include/libio.h" 3 4 struct _IO_jump_t; struct _IO_FILE; # 155 "/usr/include/libio.h" 3 4 typedef void _IO_lock_t; struct _IO_marker { struct _IO_marker *_next; struct _IO_FILE *_sbuf; int _pos; # 178 "/usr/include/libio.h" 3 4 }; enum __codecvt_result { __codecvt_ok, __codecvt_partial, __codecvt_error, __codecvt_noconv }; # 246 "/usr/include/libio.h" 3 4 struct _IO_FILE { int _flags; char* _IO_read_ptr; char* _IO_read_end; char* _IO_read_base; char* _IO_write_base; char* _IO_write_ptr; char* _IO_write_end; char* _IO_buf_base; char* _IO_buf_end; char *_IO_save_base; char *_IO_backup_base; char *_IO_save_end; struct _IO_marker *_markers; struct _IO_FILE *_chain; int _fileno; int _flags2; __off_t _old_offset; unsigned short _cur_column; signed char _vtable_offset; char _shortbuf[1]; _IO_lock_t *_lock; # 294 "/usr/include/libio.h" 3 4 __off64_t _offset; # 303 "/usr/include/libio.h" 3 4 void *__pad1; void *__pad2; void *__pad3; void *__pad4; size_t __pad5; int _mode; char _unused2[15 * sizeof (int) - 4 * sizeof (void *) - sizeof (size_t)]; }; typedef struct _IO_FILE _IO_FILE; struct _IO_FILE_plus; extern struct _IO_FILE_plus _IO_2_1_stdin_; extern struct _IO_FILE_plus _IO_2_1_stdout_; extern struct _IO_FILE_plus _IO_2_1_stderr_; # 339 "/usr/include/libio.h" 3 4 typedef __ssize_t __io_read_fn (void *__cookie, char *__buf, size_t __nbytes); typedef __ssize_t __io_write_fn (void *__cookie, const char *__buf, size_t __n); typedef int __io_seek_fn (void *__cookie, __off64_t *__pos, int __w); typedef int __io_close_fn (void *__cookie); # 391 "/usr/include/libio.h" 3 4 extern int __underflow (_IO_FILE *); extern int __uflow (_IO_FILE *); extern int __overflow (_IO_FILE *, int); # 435 "/usr/include/libio.h" 3 4 extern int _IO_getc (_IO_FILE *__fp); extern int _IO_putc (int __c, _IO_FILE *__fp); extern int _IO_feof (_IO_FILE *__fp) __attribute__ ((__nothrow__ , __leaf__)); extern int _IO_ferror (_IO_FILE *__fp) __attribute__ ((__nothrow__ , __leaf__)); extern int _IO_peekc_locked (_IO_FILE *__fp); extern void _IO_flockfile (_IO_FILE *) __attribute__ ((__nothrow__ , __leaf__)); extern void _IO_funlockfile (_IO_FILE *) __attribute__ ((__nothrow__ , __leaf__)); extern int _IO_ftrylockfile (_IO_FILE *) __attribute__ ((__nothrow__ , __leaf__)); # 465 "/usr/include/libio.h" 3 4 extern int _IO_vfscanf (_IO_FILE * __restrict, const char * __restrict, __gnuc_va_list, int *__restrict); extern int _IO_vfprintf (_IO_FILE *__restrict, const char *__restrict, __gnuc_va_list); extern __ssize_t _IO_padn (_IO_FILE *, int, __ssize_t); extern size_t _IO_sgetn (_IO_FILE *, void *, size_t); extern __off64_t _IO_seekoff (_IO_FILE *, __off64_t, int, int); extern __off64_t _IO_seekpos (_IO_FILE *, __off64_t, int); extern void _IO_free_backup_area (_IO_FILE *) __attribute__ ((__nothrow__ , __leaf__)); # 75 "/usr/include/stdio.h" 2 3 4 typedef __gnuc_va_list va_list; # 90 "/usr/include/stdio.h" 3 4 typedef __off_t off_t; # 102 "/usr/include/stdio.h" 3 4 typedef __ssize_t ssize_t; typedef _G_fpos_t fpos_t; # 164 "/usr/include/stdio.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/stdio_lim.h" 1 3 4 # 165 "/usr/include/stdio.h" 2 3 4 extern struct _IO_FILE *stdin; extern struct _IO_FILE *stdout; extern struct _IO_FILE *stderr; extern int remove (const char *__filename) __attribute__ ((__nothrow__ , __leaf__)); extern int rename (const char *__old, const char *__new) __attribute__ ((__nothrow__ , __leaf__)); extern int renameat (int __oldfd, const char *__old, int __newfd, const char *__new) __attribute__ ((__nothrow__ , __leaf__)); extern FILE *tmpfile (void) ; # 209 "/usr/include/stdio.h" 3 4 extern char *tmpnam (char *__s) __attribute__ ((__nothrow__ , __leaf__)) ; extern char *tmpnam_r (char *__s) __attribute__ ((__nothrow__ , __leaf__)) ; # 227 "/usr/include/stdio.h" 3 4 extern char *tempnam (const char *__dir, const char *__pfx) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__malloc__)) ; extern int fclose (FILE *__stream); extern int fflush (FILE *__stream); # 252 "/usr/include/stdio.h" 3 4 extern int fflush_unlocked (FILE *__stream); # 266 "/usr/include/stdio.h" 3 4 extern FILE *fopen (const char *__restrict __filename, const char *__restrict __modes) ; extern FILE *freopen (const char *__restrict __filename, const char *__restrict __modes, FILE *__restrict __stream) ; # 295 "/usr/include/stdio.h" 3 4 # 306 "/usr/include/stdio.h" 3 4 extern FILE *fdopen (int __fd, const char *__modes) __attribute__ ((__nothrow__ , __leaf__)) ; # 319 "/usr/include/stdio.h" 3 4 extern FILE *fmemopen (void *__s, size_t __len, const char *__modes) __attribute__ ((__nothrow__ , __leaf__)) ; extern FILE *open_memstream (char **__bufloc, size_t *__sizeloc) __attribute__ ((__nothrow__ , __leaf__)) ; extern void setbuf (FILE *__restrict __stream, char *__restrict __buf) __attribute__ ((__nothrow__ , __leaf__)); extern int setvbuf (FILE *__restrict __stream, char *__restrict __buf, int __modes, size_t __n) __attribute__ ((__nothrow__ , __leaf__)); extern void setbuffer (FILE *__restrict __stream, char *__restrict __buf, size_t __size) __attribute__ ((__nothrow__ , __leaf__)); extern void setlinebuf (FILE *__stream) __attribute__ ((__nothrow__ , __leaf__)); extern int fprintf (FILE *__restrict __stream, const char *__restrict __format, ...); extern int printf (const char *__restrict __format, ...); extern int sprintf (char *__restrict __s, const char *__restrict __format, ...) __attribute__ ((__nothrow__)); extern int vfprintf (FILE *__restrict __s, const char *__restrict __format, __gnuc_va_list __arg); extern int vprintf (const char *__restrict __format, __gnuc_va_list __arg); extern int vsprintf (char *__restrict __s, const char *__restrict __format, __gnuc_va_list __arg) __attribute__ ((__nothrow__)); extern int snprintf (char *__restrict __s, size_t __maxlen, const char *__restrict __format, ...) __attribute__ ((__nothrow__)) __attribute__ ((__format__ (__printf__, 3, 4))); extern int vsnprintf (char *__restrict __s, size_t __maxlen, const char *__restrict __format, __gnuc_va_list __arg) __attribute__ ((__nothrow__)) __attribute__ ((__format__ (__printf__, 3, 0))); # 412 "/usr/include/stdio.h" 3 4 extern int vdprintf (int __fd, const char *__restrict __fmt, __gnuc_va_list __arg) __attribute__ ((__format__ (__printf__, 2, 0))); extern int dprintf (int __fd, const char *__restrict __fmt, ...) __attribute__ ((__format__ (__printf__, 2, 3))); extern int fscanf (FILE *__restrict __stream, const char *__restrict __format, ...) ; extern int scanf (const char *__restrict __format, ...) ; extern int sscanf (const char *__restrict __s, const char *__restrict __format, ...) __attribute__ ((__nothrow__ , __leaf__)); # 443 "/usr/include/stdio.h" 3 4 extern int fscanf (FILE *__restrict __stream, const char *__restrict __format, ...) __asm__ ("" "__isoc99_fscanf") ; extern int scanf (const char *__restrict __format, ...) __asm__ ("" "__isoc99_scanf") ; extern int sscanf (const char *__restrict __s, const char *__restrict __format, ...) __asm__ ("" "__isoc99_sscanf") __attribute__ ((__nothrow__ , __leaf__)) ; # 463 "/usr/include/stdio.h" 3 4 extern int vfscanf (FILE *__restrict __s, const char *__restrict __format, __gnuc_va_list __arg) __attribute__ ((__format__ (__scanf__, 2, 0))) ; extern int vscanf (const char *__restrict __format, __gnuc_va_list __arg) __attribute__ ((__format__ (__scanf__, 1, 0))) ; extern int vsscanf (const char *__restrict __s, const char *__restrict __format, __gnuc_va_list __arg) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__format__ (__scanf__, 2, 0))); # 494 "/usr/include/stdio.h" 3 4 extern int vfscanf (FILE *__restrict __s, const char *__restrict __format, __gnuc_va_list __arg) __asm__ ("" "__isoc99_vfscanf") __attribute__ ((__format__ (__scanf__, 2, 0))) ; extern int vscanf (const char *__restrict __format, __gnuc_va_list __arg) __asm__ ("" "__isoc99_vscanf") __attribute__ ((__format__ (__scanf__, 1, 0))) ; extern int vsscanf (const char *__restrict __s, const char *__restrict __format, __gnuc_va_list __arg) __asm__ ("" "__isoc99_vsscanf") __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__format__ (__scanf__, 2, 0))); # 522 "/usr/include/stdio.h" 3 4 extern int fgetc (FILE *__stream); extern int getc (FILE *__stream); extern int getchar (void); # 550 "/usr/include/stdio.h" 3 4 extern int getc_unlocked (FILE *__stream); extern int getchar_unlocked (void); # 561 "/usr/include/stdio.h" 3 4 extern int fgetc_unlocked (FILE *__stream); extern int fputc (int __c, FILE *__stream); extern int putc (int __c, FILE *__stream); extern int putchar (int __c); # 594 "/usr/include/stdio.h" 3 4 extern int fputc_unlocked (int __c, FILE *__stream); extern int putc_unlocked (int __c, FILE *__stream); extern int putchar_unlocked (int __c); extern int getw (FILE *__stream); extern int putw (int __w, FILE *__stream); extern char *fgets (char *__restrict __s, int __n, FILE *__restrict __stream) ; # 638 "/usr/include/stdio.h" 3 4 extern char *gets (char *__s) __attribute__ ((__deprecated__)); # 665 "/usr/include/stdio.h" 3 4 extern __ssize_t __getdelim (char **__restrict __lineptr, size_t *__restrict __n, int __delimiter, FILE *__restrict __stream) ; extern __ssize_t getdelim (char **__restrict __lineptr, size_t *__restrict __n, int __delimiter, FILE *__restrict __stream) ; extern __ssize_t getline (char **__restrict __lineptr, size_t *__restrict __n, FILE *__restrict __stream) ; extern int fputs (const char *__restrict __s, FILE *__restrict __stream); extern int puts (const char *__s); extern int ungetc (int __c, FILE *__stream); extern size_t fread (void *__restrict __ptr, size_t __size, size_t __n, FILE *__restrict __stream) ; extern size_t fwrite (const void *__restrict __ptr, size_t __size, size_t __n, FILE *__restrict __s); # 737 "/usr/include/stdio.h" 3 4 extern size_t fread_unlocked (void *__restrict __ptr, size_t __size, size_t __n, FILE *__restrict __stream) ; extern size_t fwrite_unlocked (const void *__restrict __ptr, size_t __size, size_t __n, FILE *__restrict __stream); extern int fseek (FILE *__stream, long int __off, int __whence); extern long int ftell (FILE *__stream) ; extern void rewind (FILE *__stream); # 773 "/usr/include/stdio.h" 3 4 extern int fseeko (FILE *__stream, __off_t __off, int __whence); extern __off_t ftello (FILE *__stream) ; # 792 "/usr/include/stdio.h" 3 4 extern int fgetpos (FILE *__restrict __stream, fpos_t *__restrict __pos); extern int fsetpos (FILE *__stream, const fpos_t *__pos); # 815 "/usr/include/stdio.h" 3 4 # 824 "/usr/include/stdio.h" 3 4 extern void clearerr (FILE *__stream) __attribute__ ((__nothrow__ , __leaf__)); extern int feof (FILE *__stream) __attribute__ ((__nothrow__ , __leaf__)) ; extern int ferror (FILE *__stream) __attribute__ ((__nothrow__ , __leaf__)) ; extern void clearerr_unlocked (FILE *__stream) __attribute__ ((__nothrow__ , __leaf__)); extern int feof_unlocked (FILE *__stream) __attribute__ ((__nothrow__ , __leaf__)) ; extern int ferror_unlocked (FILE *__stream) __attribute__ ((__nothrow__ , __leaf__)) ; extern void perror (const char *__s); # 1 "/usr/include/x86_64-linux-gnu/bits/sys_errlist.h" 1 3 4 # 26 "/usr/include/x86_64-linux-gnu/bits/sys_errlist.h" 3 4 extern int sys_nerr; extern const char *const sys_errlist[]; # 854 "/usr/include/stdio.h" 2 3 4 extern int fileno (FILE *__stream) __attribute__ ((__nothrow__ , __leaf__)) ; extern int fileno_unlocked (FILE *__stream) __attribute__ ((__nothrow__ , __leaf__)) ; # 873 "/usr/include/stdio.h" 3 4 extern FILE *popen (const char *__command, const char *__modes) ; extern int pclose (FILE *__stream); extern char *ctermid (char *__s) __attribute__ ((__nothrow__ , __leaf__)); # 913 "/usr/include/stdio.h" 3 4 extern void flockfile (FILE *__stream) __attribute__ ((__nothrow__ , __leaf__)); extern int ftrylockfile (FILE *__stream) __attribute__ ((__nothrow__ , __leaf__)) ; extern void funlockfile (FILE *__stream) __attribute__ ((__nothrow__ , __leaf__)); # 943 "/usr/include/stdio.h" 3 4 # 26 "/usr/include/malloc.h" 2 3 4 # 57 "/usr/include/malloc.h" 3 4 extern void *malloc (size_t __size) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__malloc__)) ; extern void *calloc (size_t __nmemb, size_t __size) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__malloc__)) ; extern void *realloc (void *__ptr, size_t __size) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__warn_unused_result__)); extern void free (void *__ptr) __attribute__ ((__nothrow__ , __leaf__)); extern void cfree (void *__ptr) __attribute__ ((__nothrow__ , __leaf__)); extern void *memalign (size_t __alignment, size_t __size) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__malloc__)) ; extern void *valloc (size_t __size) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__malloc__)) ; extern void * pvalloc (size_t __size) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__malloc__)) ; extern void *(*__morecore) (ptrdiff_t __size); extern void *__default_morecore (ptrdiff_t __size) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__malloc__)); struct mallinfo { int arena; int ordblks; int smblks; int hblks; int hblkhd; int usmblks; int fsmblks; int uordblks; int fordblks; int keepcost; }; extern struct mallinfo mallinfo (void) __attribute__ ((__nothrow__ , __leaf__)); # 143 "/usr/include/malloc.h" 3 4 extern int mallopt (int __param, int __val) __attribute__ ((__nothrow__ , __leaf__)); extern int malloc_trim (size_t __pad) __attribute__ ((__nothrow__ , __leaf__)); extern size_t malloc_usable_size (void *__ptr) __attribute__ ((__nothrow__ , __leaf__)); extern void malloc_stats (void) __attribute__ ((__nothrow__ , __leaf__)); extern int malloc_info (int __options, FILE *__fp) __attribute__ ((__nothrow__ , __leaf__)); extern void *malloc_get_state (void) __attribute__ ((__nothrow__ , __leaf__)); extern int malloc_set_state (void *__ptr) __attribute__ ((__nothrow__ , __leaf__)); extern void (*volatile __malloc_initialize_hook) (void) __attribute__ ((__deprecated__)); extern void (*volatile __free_hook) (void *__ptr, const void *) __attribute__ ((__deprecated__)); extern void *(*volatile __malloc_hook) (size_t __size, const void *) __attribute__ ((__deprecated__)); extern void *(*volatile __realloc_hook) (void *__ptr, size_t __size, const void *) __attribute__ ((__deprecated__)); extern void *(*volatile __memalign_hook) (size_t __alignment, size_t __size, const void *) __attribute__ ((__deprecated__)); extern void (*volatile __after_morecore_hook) (void); extern void __malloc_check_init (void) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__deprecated__)); # 3 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 Defined "HAVE_MALLOC_H" to "1" ================================================================================ TEST check from config.headers(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: time.h sh: tau_cc.sh -E -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.headers /tmp/petsc-U9YCMv/config.headers/conftest.c Executing: tau_cc.sh -E -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.headers /tmp/petsc-U9YCMv/config.headers/conftest.c sh: # 1 "/tmp/petsc-U9YCMv/config.headers/conftest.c" # 1 "" # 1 "/tmp/petsc-U9YCMv/config.headers/conftest.c" # 1 "/tmp/petsc-U9YCMv/config.headers/confdefs.h" 1 # 2 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 # 1 "/tmp/petsc-U9YCMv/config.headers/conffix.h" 1 # 3 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 # 1 "/usr/include/time.h" 1 3 4 # 27 "/usr/include/time.h" 3 4 # 1 "/usr/include/features.h" 1 3 4 # 341 "/usr/include/features.h" 3 4 # 1 "/usr/include/stdc-predef.h" 1 3 4 # 30 "/usr/include/stdc-predef.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/predefs.h" 1 3 4 # 31 "/usr/include/stdc-predef.h" 2 3 4 # 342 "/usr/include/features.h" 2 3 4 # 371 "/usr/include/features.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/sys/cdefs.h" 1 3 4 # 385 "/usr/include/x86_64-linux-gnu/sys/cdefs.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/wordsize.h" 1 3 4 # 386 "/usr/include/x86_64-linux-gnu/sys/cdefs.h" 2 3 4 # 372 "/usr/include/features.h" 2 3 4 # 395 "/usr/include/features.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/gnu/stubs.h" 1 3 4 # 10 "/usr/include/x86_64-linux-gnu/gnu/stubs.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/gnu/stubs-64.h" 1 3 4 # 11 "/usr/include/x86_64-linux-gnu/gnu/stubs.h" 2 3 4 # 396 "/usr/include/features.h" 2 3 4 # 28 "/usr/include/time.h" 2 3 4 # 1 "/usr/lib/gcc/x86_64-linux-gnu/4.7/include/stddef.h" 1 3 4 # 213 "/usr/lib/gcc/x86_64-linux-gnu/4.7/include/stddef.h" 3 4 typedef long unsigned int size_t; # 38 "/usr/include/time.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/time.h" 1 3 4 # 42 "/usr/include/time.h" 2 3 4 # 55 "/usr/include/time.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/types.h" 1 3 4 # 27 "/usr/include/x86_64-linux-gnu/bits/types.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/wordsize.h" 1 3 4 # 28 "/usr/include/x86_64-linux-gnu/bits/types.h" 2 3 4 typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; # 130 "/usr/include/x86_64-linux-gnu/bits/types.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/typesizes.h" 1 3 4 # 131 "/usr/include/x86_64-linux-gnu/bits/types.h" 2 3 4 typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned long int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef long int __suseconds_t; typedef int __daddr_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __fsword_t; typedef long int __ssize_t; typedef long int __syscall_slong_t; typedef unsigned long int __syscall_ulong_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; # 56 "/usr/include/time.h" 2 3 4 typedef __clock_t clock_t; # 73 "/usr/include/time.h" 3 4 typedef __time_t time_t; # 91 "/usr/include/time.h" 3 4 typedef __clockid_t clockid_t; # 103 "/usr/include/time.h" 3 4 typedef __timer_t timer_t; # 120 "/usr/include/time.h" 3 4 struct timespec { __time_t tv_sec; __syscall_slong_t tv_nsec; }; struct tm { int tm_sec; int tm_min; int tm_hour; int tm_mday; int tm_mon; int tm_year; int tm_wday; int tm_yday; int tm_isdst; long int tm_gmtoff; const char *tm_zone; }; struct itimerspec { struct timespec it_interval; struct timespec it_value; }; struct sigevent; typedef __pid_t pid_t; # 186 "/usr/include/time.h" 3 4 extern clock_t clock (void) __attribute__ ((__nothrow__ , __leaf__)); extern time_t time (time_t *__timer) __attribute__ ((__nothrow__ , __leaf__)); extern double difftime (time_t __time1, time_t __time0) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); extern time_t mktime (struct tm *__tp) __attribute__ ((__nothrow__ , __leaf__)); extern size_t strftime (char *__restrict __s, size_t __maxsize, const char *__restrict __format, const struct tm *__restrict __tp) __attribute__ ((__nothrow__ , __leaf__)); # 221 "/usr/include/time.h" 3 4 # 1 "/usr/include/xlocale.h" 1 3 4 # 27 "/usr/include/xlocale.h" 3 4 typedef struct __locale_struct { struct __locale_data *__locales[13]; const unsigned short int *__ctype_b; const int *__ctype_tolower; const int *__ctype_toupper; const char *__names[13]; } *__locale_t; typedef __locale_t locale_t; # 222 "/usr/include/time.h" 2 3 4 extern size_t strftime_l (char *__restrict __s, size_t __maxsize, const char *__restrict __format, const struct tm *__restrict __tp, __locale_t __loc) __attribute__ ((__nothrow__ , __leaf__)); # 236 "/usr/include/time.h" 3 4 extern struct tm *gmtime (const time_t *__timer) __attribute__ ((__nothrow__ , __leaf__)); extern struct tm *localtime (const time_t *__timer) __attribute__ ((__nothrow__ , __leaf__)); extern struct tm *gmtime_r (const time_t *__restrict __timer, struct tm *__restrict __tp) __attribute__ ((__nothrow__ , __leaf__)); extern struct tm *localtime_r (const time_t *__restrict __timer, struct tm *__restrict __tp) __attribute__ ((__nothrow__ , __leaf__)); extern char *asctime (const struct tm *__tp) __attribute__ ((__nothrow__ , __leaf__)); extern char *ctime (const time_t *__timer) __attribute__ ((__nothrow__ , __leaf__)); extern char *asctime_r (const struct tm *__restrict __tp, char *__restrict __buf) __attribute__ ((__nothrow__ , __leaf__)); extern char *ctime_r (const time_t *__restrict __timer, char *__restrict __buf) __attribute__ ((__nothrow__ , __leaf__)); extern char *__tzname[2]; extern int __daylight; extern long int __timezone; extern char *tzname[2]; extern void tzset (void) __attribute__ ((__nothrow__ , __leaf__)); extern int daylight; extern long int timezone; extern int stime (const time_t *__when) __attribute__ ((__nothrow__ , __leaf__)); # 319 "/usr/include/time.h" 3 4 extern time_t timegm (struct tm *__tp) __attribute__ ((__nothrow__ , __leaf__)); extern time_t timelocal (struct tm *__tp) __attribute__ ((__nothrow__ , __leaf__)); extern int dysize (int __year) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); # 334 "/usr/include/time.h" 3 4 extern int nanosleep (const struct timespec *__requested_time, struct timespec *__remaining); extern int clock_getres (clockid_t __clock_id, struct timespec *__res) __attribute__ ((__nothrow__ , __leaf__)); extern int clock_gettime (clockid_t __clock_id, struct timespec *__tp) __attribute__ ((__nothrow__ , __leaf__)); extern int clock_settime (clockid_t __clock_id, const struct timespec *__tp) __attribute__ ((__nothrow__ , __leaf__)); extern int clock_nanosleep (clockid_t __clock_id, int __flags, const struct timespec *__req, struct timespec *__rem); extern int clock_getcpuclockid (pid_t __pid, clockid_t *__clock_id) __attribute__ ((__nothrow__ , __leaf__)); extern int timer_create (clockid_t __clock_id, struct sigevent *__restrict __evp, timer_t *__restrict __timerid) __attribute__ ((__nothrow__ , __leaf__)); extern int timer_delete (timer_t __timerid) __attribute__ ((__nothrow__ , __leaf__)); extern int timer_settime (timer_t __timerid, int __flags, const struct itimerspec *__restrict __value, struct itimerspec *__restrict __ovalue) __attribute__ ((__nothrow__ , __leaf__)); extern int timer_gettime (timer_t __timerid, struct itimerspec *__value) __attribute__ ((__nothrow__ , __leaf__)); extern int timer_getoverrun (timer_t __timerid) __attribute__ ((__nothrow__ , __leaf__)); # 430 "/usr/include/time.h" 3 4 # 3 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 Defined "HAVE_TIME_H" to "1" ================================================================================ TEST check from config.headers(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: Direct.h sh: tau_cc.sh -E -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.headers /tmp/petsc-U9YCMv/config.headers/conftest.c Executing: tau_cc.sh -E -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.headers /tmp/petsc-U9YCMv/config.headers/conftest.c sh: # 1 "/tmp/petsc-U9YCMv/config.headers/conftest.c" # 1 "" # 1 "/tmp/petsc-U9YCMv/config.headers/conftest.c" # 1 "/tmp/petsc-U9YCMv/config.headers/confdefs.h" 1 # 2 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 # 1 "/tmp/petsc-U9YCMv/config.headers/conffix.h" 1 # 3 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 Possible ERROR while running preprocessor: /tmp/petsc-U9YCMv/config.headers/conftest.c:3:20: fatal error: Direct.h: No such file or directory compilation terminated. make: *** [all] Error 1 ret = 256 error message = {/tmp/petsc-U9YCMv/config.headers/conftest.c:3:20: fatal error: Direct.h: No such file or directory compilation terminated. make: *** [all] Error 1 } Source: #include "confdefs.h" #include "conffix.h" #include ================================================================================ TEST check from config.headers(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: Ws2tcpip.h sh: tau_cc.sh -E -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.headers /tmp/petsc-U9YCMv/config.headers/conftest.c Executing: tau_cc.sh -E -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.headers /tmp/petsc-U9YCMv/config.headers/conftest.c sh: # 1 "/tmp/petsc-U9YCMv/config.headers/conftest.c" # 1 "" # 1 "/tmp/petsc-U9YCMv/config.headers/conftest.c" # 1 "/tmp/petsc-U9YCMv/config.headers/confdefs.h" 1 # 2 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 # 1 "/tmp/petsc-U9YCMv/config.headers/conffix.h" 1 # 3 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 Possible ERROR while running preprocessor: /tmp/petsc-U9YCMv/config.headers/conftest.c:3:22: fatal error: Ws2tcpip.h: No such file or directory compilation terminated. make: *** [all] Error 1 ret = 256 error message = {/tmp/petsc-U9YCMv/config.headers/conftest.c:3:22: fatal error: Ws2tcpip.h: No such file or directory compilation terminated. make: *** [all] Error 1 } Source: #include "confdefs.h" #include "conffix.h" #include ================================================================================ TEST check from config.headers(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: endian.h sh: tau_cc.sh -E -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.headers /tmp/petsc-U9YCMv/config.headers/conftest.c Executing: tau_cc.sh -E -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.headers /tmp/petsc-U9YCMv/config.headers/conftest.c sh: # 1 "/tmp/petsc-U9YCMv/config.headers/conftest.c" # 1 "" # 1 "/tmp/petsc-U9YCMv/config.headers/conftest.c" # 1 "/tmp/petsc-U9YCMv/config.headers/confdefs.h" 1 # 2 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 # 1 "/tmp/petsc-U9YCMv/config.headers/conffix.h" 1 # 3 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 # 1 "/usr/include/endian.h" 1 3 4 # 21 "/usr/include/endian.h" 3 4 # 1 "/usr/include/features.h" 1 3 4 # 341 "/usr/include/features.h" 3 4 # 1 "/usr/include/stdc-predef.h" 1 3 4 # 30 "/usr/include/stdc-predef.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/predefs.h" 1 3 4 # 31 "/usr/include/stdc-predef.h" 2 3 4 # 342 "/usr/include/features.h" 2 3 4 # 371 "/usr/include/features.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/sys/cdefs.h" 1 3 4 # 385 "/usr/include/x86_64-linux-gnu/sys/cdefs.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/wordsize.h" 1 3 4 # 386 "/usr/include/x86_64-linux-gnu/sys/cdefs.h" 2 3 4 # 372 "/usr/include/features.h" 2 3 4 # 395 "/usr/include/features.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/gnu/stubs.h" 1 3 4 # 10 "/usr/include/x86_64-linux-gnu/gnu/stubs.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/gnu/stubs-64.h" 1 3 4 # 11 "/usr/include/x86_64-linux-gnu/gnu/stubs.h" 2 3 4 # 396 "/usr/include/features.h" 2 3 4 # 22 "/usr/include/endian.h" 2 3 4 # 36 "/usr/include/endian.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/endian.h" 1 3 4 # 37 "/usr/include/endian.h" 2 3 4 # 60 "/usr/include/endian.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/byteswap.h" 1 3 4 # 27 "/usr/include/x86_64-linux-gnu/bits/byteswap.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/types.h" 1 3 4 # 27 "/usr/include/x86_64-linux-gnu/bits/types.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/wordsize.h" 1 3 4 # 28 "/usr/include/x86_64-linux-gnu/bits/types.h" 2 3 4 typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; # 130 "/usr/include/x86_64-linux-gnu/bits/types.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/typesizes.h" 1 3 4 # 131 "/usr/include/x86_64-linux-gnu/bits/types.h" 2 3 4 typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned long int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef long int __suseconds_t; typedef int __daddr_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __fsword_t; typedef long int __ssize_t; typedef long int __syscall_slong_t; typedef unsigned long int __syscall_ulong_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; # 28 "/usr/include/x86_64-linux-gnu/bits/byteswap.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/wordsize.h" 1 3 4 # 29 "/usr/include/x86_64-linux-gnu/bits/byteswap.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/byteswap-16.h" 1 3 4 # 36 "/usr/include/x86_64-linux-gnu/bits/byteswap.h" 2 3 4 # 44 "/usr/include/x86_64-linux-gnu/bits/byteswap.h" 3 4 static __inline unsigned int __bswap_32 (unsigned int __bsx) { return __builtin_bswap32 (__bsx); } # 108 "/usr/include/x86_64-linux-gnu/bits/byteswap.h" 3 4 static __inline __uint64_t __bswap_64 (__uint64_t __bsx) { return __builtin_bswap64 (__bsx); } # 61 "/usr/include/endian.h" 2 3 4 # 3 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 Defined "HAVE_ENDIAN_H" to "1" ================================================================================ TEST check from config.headers(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: ieeefp.h sh: tau_cc.sh -E -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.headers /tmp/petsc-U9YCMv/config.headers/conftest.c Executing: tau_cc.sh -E -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.headers /tmp/petsc-U9YCMv/config.headers/conftest.c sh: # 1 "/tmp/petsc-U9YCMv/config.headers/conftest.c" # 1 "" # 1 "/tmp/petsc-U9YCMv/config.headers/conftest.c" # 1 "/tmp/petsc-U9YCMv/config.headers/confdefs.h" 1 # 2 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 # 1 "/tmp/petsc-U9YCMv/config.headers/conffix.h" 1 # 3 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 Possible ERROR while running preprocessor: /tmp/petsc-U9YCMv/config.headers/conftest.c:3:20: fatal error: ieeefp.h: No such file or directory compilation terminated. make: *** [all] Error 1 ret = 256 error message = {/tmp/petsc-U9YCMv/config.headers/conftest.c:3:20: fatal error: ieeefp.h: No such file or directory compilation terminated. make: *** [all] Error 1 } Source: #include "confdefs.h" #include "conffix.h" #include ================================================================================ TEST check from config.headers(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: strings.h sh: tau_cc.sh -E -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.headers /tmp/petsc-U9YCMv/config.headers/conftest.c Executing: tau_cc.sh -E -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.headers /tmp/petsc-U9YCMv/config.headers/conftest.c sh: # 1 "/tmp/petsc-U9YCMv/config.headers/conftest.c" # 1 "" # 1 "/tmp/petsc-U9YCMv/config.headers/conftest.c" # 1 "/tmp/petsc-U9YCMv/config.headers/confdefs.h" 1 # 2 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 # 1 "/tmp/petsc-U9YCMv/config.headers/conffix.h" 1 # 3 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 # 1 "/usr/include/strings.h" 1 3 4 # 27 "/usr/include/strings.h" 3 4 # 1 "/usr/include/features.h" 1 3 4 # 341 "/usr/include/features.h" 3 4 # 1 "/usr/include/stdc-predef.h" 1 3 4 # 30 "/usr/include/stdc-predef.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/predefs.h" 1 3 4 # 31 "/usr/include/stdc-predef.h" 2 3 4 # 342 "/usr/include/features.h" 2 3 4 # 371 "/usr/include/features.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/sys/cdefs.h" 1 3 4 # 385 "/usr/include/x86_64-linux-gnu/sys/cdefs.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/wordsize.h" 1 3 4 # 386 "/usr/include/x86_64-linux-gnu/sys/cdefs.h" 2 3 4 # 372 "/usr/include/features.h" 2 3 4 # 395 "/usr/include/features.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/gnu/stubs.h" 1 3 4 # 10 "/usr/include/x86_64-linux-gnu/gnu/stubs.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/gnu/stubs-64.h" 1 3 4 # 11 "/usr/include/x86_64-linux-gnu/gnu/stubs.h" 2 3 4 # 396 "/usr/include/features.h" 2 3 4 # 28 "/usr/include/strings.h" 2 3 4 # 1 "/usr/lib/gcc/x86_64-linux-gnu/4.7/include/stddef.h" 1 3 4 # 213 "/usr/lib/gcc/x86_64-linux-gnu/4.7/include/stddef.h" 3 4 typedef long unsigned int size_t; # 30 "/usr/include/strings.h" 2 3 4 extern int bcmp (const void *__s1, const void *__s2, size_t __n) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__pure__)); extern void bcopy (const void *__src, void *__dest, size_t __n) __attribute__ ((__nothrow__ , __leaf__)); extern void bzero (void *__s, size_t __n) __attribute__ ((__nothrow__ , __leaf__)); # 73 "/usr/include/strings.h" 3 4 extern char *index (const char *__s, int __c) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1))); # 101 "/usr/include/strings.h" 3 4 extern char *rindex (const char *__s, int __c) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1))); extern int ffs (int __i) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((const)); extern int strcasecmp (const char *__s1, const char *__s2) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__pure__)); extern int strncasecmp (const char *__s1, const char *__s2, size_t __n) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__pure__)); # 1 "/usr/include/xlocale.h" 1 3 4 # 27 "/usr/include/xlocale.h" 3 4 typedef struct __locale_struct { struct __locale_data *__locales[13]; const unsigned short int *__ctype_b; const int *__ctype_tolower; const int *__ctype_toupper; const char *__names[13]; } *__locale_t; typedef __locale_t locale_t; # 125 "/usr/include/strings.h" 2 3 4 extern int strcasecmp_l (const char *__s1, const char *__s2, __locale_t __loc) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1, 2, 3))); extern int strncasecmp_l (const char *__s1, const char *__s2, size_t __n, __locale_t __loc) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1, 2, 4))); # 3 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 Defined "HAVE_STRINGS_H" to "1" ================================================================================ TEST check from config.headers(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sched.h sh: tau_cc.sh -E -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.headers /tmp/petsc-U9YCMv/config.headers/conftest.c Executing: tau_cc.sh -E -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.headers /tmp/petsc-U9YCMv/config.headers/conftest.c sh: # 1 "/tmp/petsc-U9YCMv/config.headers/conftest.c" # 1 "" # 1 "/tmp/petsc-U9YCMv/config.headers/conftest.c" # 1 "/tmp/petsc-U9YCMv/config.headers/confdefs.h" 1 # 2 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 # 1 "/tmp/petsc-U9YCMv/config.headers/conffix.h" 1 # 3 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 # 1 "/usr/include/sched.h" 1 3 4 # 23 "/usr/include/sched.h" 3 4 # 1 "/usr/include/features.h" 1 3 4 # 341 "/usr/include/features.h" 3 4 # 1 "/usr/include/stdc-predef.h" 1 3 4 # 30 "/usr/include/stdc-predef.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/predefs.h" 1 3 4 # 31 "/usr/include/stdc-predef.h" 2 3 4 # 342 "/usr/include/features.h" 2 3 4 # 371 "/usr/include/features.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/sys/cdefs.h" 1 3 4 # 385 "/usr/include/x86_64-linux-gnu/sys/cdefs.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/wordsize.h" 1 3 4 # 386 "/usr/include/x86_64-linux-gnu/sys/cdefs.h" 2 3 4 # 372 "/usr/include/features.h" 2 3 4 # 395 "/usr/include/features.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/gnu/stubs.h" 1 3 4 # 10 "/usr/include/x86_64-linux-gnu/gnu/stubs.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/gnu/stubs-64.h" 1 3 4 # 11 "/usr/include/x86_64-linux-gnu/gnu/stubs.h" 2 3 4 # 396 "/usr/include/features.h" 2 3 4 # 24 "/usr/include/sched.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/types.h" 1 3 4 # 27 "/usr/include/x86_64-linux-gnu/bits/types.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/wordsize.h" 1 3 4 # 28 "/usr/include/x86_64-linux-gnu/bits/types.h" 2 3 4 typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; # 130 "/usr/include/x86_64-linux-gnu/bits/types.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/typesizes.h" 1 3 4 # 131 "/usr/include/x86_64-linux-gnu/bits/types.h" 2 3 4 typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned long int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef long int __suseconds_t; typedef int __daddr_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __fsword_t; typedef long int __ssize_t; typedef long int __syscall_slong_t; typedef unsigned long int __syscall_ulong_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; # 27 "/usr/include/sched.h" 2 3 4 # 1 "/usr/lib/gcc/x86_64-linux-gnu/4.7/include/stddef.h" 1 3 4 # 213 "/usr/lib/gcc/x86_64-linux-gnu/4.7/include/stddef.h" 3 4 typedef long unsigned int size_t; # 30 "/usr/include/sched.h" 2 3 4 # 1 "/usr/include/time.h" 1 3 4 # 73 "/usr/include/time.h" 3 4 typedef __time_t time_t; # 120 "/usr/include/time.h" 3 4 struct timespec { __time_t tv_sec; __syscall_slong_t tv_nsec; }; # 34 "/usr/include/sched.h" 2 3 4 typedef __pid_t pid_t; # 1 "/usr/include/x86_64-linux-gnu/bits/sched.h" 1 3 4 # 73 "/usr/include/x86_64-linux-gnu/bits/sched.h" 3 4 struct sched_param { int __sched_priority; }; # 96 "/usr/include/x86_64-linux-gnu/bits/sched.h" 3 4 struct __sched_param { int __sched_priority; }; # 119 "/usr/include/x86_64-linux-gnu/bits/sched.h" 3 4 typedef unsigned long int __cpu_mask; typedef struct { __cpu_mask __bits[1024 / (8 * sizeof (__cpu_mask))]; } cpu_set_t; # 202 "/usr/include/x86_64-linux-gnu/bits/sched.h" 3 4 extern int __sched_cpucount (size_t __setsize, const cpu_set_t *__setp) __attribute__ ((__nothrow__ , __leaf__)); extern cpu_set_t *__sched_cpualloc (size_t __count) __attribute__ ((__nothrow__ , __leaf__)) ; extern void __sched_cpufree (cpu_set_t *__set) __attribute__ ((__nothrow__ , __leaf__)); # 43 "/usr/include/sched.h" 2 3 4 extern int sched_setparam (__pid_t __pid, const struct sched_param *__param) __attribute__ ((__nothrow__ , __leaf__)); extern int sched_getparam (__pid_t __pid, struct sched_param *__param) __attribute__ ((__nothrow__ , __leaf__)); extern int sched_setscheduler (__pid_t __pid, int __policy, const struct sched_param *__param) __attribute__ ((__nothrow__ , __leaf__)); extern int sched_getscheduler (__pid_t __pid) __attribute__ ((__nothrow__ , __leaf__)); extern int sched_yield (void) __attribute__ ((__nothrow__ , __leaf__)); extern int sched_get_priority_max (int __algorithm) __attribute__ ((__nothrow__ , __leaf__)); extern int sched_get_priority_min (int __algorithm) __attribute__ ((__nothrow__ , __leaf__)); extern int sched_rr_get_interval (__pid_t __pid, struct timespec *__t) __attribute__ ((__nothrow__ , __leaf__)); # 125 "/usr/include/sched.h" 3 4 # 3 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 Defined "HAVE_SCHED_H" to "1" ================================================================================ TEST check from config.headers(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: cxxabi.h sh: tau_cc.sh -E -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.headers /tmp/petsc-U9YCMv/config.headers/conftest.c Executing: tau_cc.sh -E -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.headers /tmp/petsc-U9YCMv/config.headers/conftest.c sh: # 1 "/tmp/petsc-U9YCMv/config.headers/conftest.c" # 1 "" # 1 "/tmp/petsc-U9YCMv/config.headers/conftest.c" # 1 "/tmp/petsc-U9YCMv/config.headers/confdefs.h" 1 # 2 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 # 1 "/tmp/petsc-U9YCMv/config.headers/conffix.h" 1 # 3 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 Possible ERROR while running preprocessor: /tmp/petsc-U9YCMv/config.headers/conftest.c:3:20: fatal error: cxxabi.h: No such file or directory compilation terminated. make: *** [all] Error 1 ret = 256 error message = {/tmp/petsc-U9YCMv/config.headers/conftest.c:3:20: fatal error: cxxabi.h: No such file or directory compilation terminated. make: *** [all] Error 1 } Source: #include "confdefs.h" #include "conffix.h" #include ================================================================================ TEST check from config.headers(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/systeminfo.h sh: tau_cc.sh -E -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.headers /tmp/petsc-U9YCMv/config.headers/conftest.c Executing: tau_cc.sh -E -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.headers /tmp/petsc-U9YCMv/config.headers/conftest.c sh: # 1 "/tmp/petsc-U9YCMv/config.headers/conftest.c" # 1 "" # 1 "/tmp/petsc-U9YCMv/config.headers/conftest.c" # 1 "/tmp/petsc-U9YCMv/config.headers/confdefs.h" 1 # 2 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 # 1 "/tmp/petsc-U9YCMv/config.headers/conffix.h" 1 # 3 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 Possible ERROR while running preprocessor: /tmp/petsc-U9YCMv/config.headers/conftest.c:3:28: fatal error: sys/systeminfo.h: No such file or directory compilation terminated. make: *** [all] Error 1 ret = 256 error message = {/tmp/petsc-U9YCMv/config.headers/conftest.c:3:28: fatal error: sys/systeminfo.h: No such file or directory compilation terminated. make: *** [all] Error 1 } Source: #include "confdefs.h" #include "conffix.h" #include ================================================================================ TEST check from config.headers(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: dos.h sh: tau_cc.sh -E -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.headers /tmp/petsc-U9YCMv/config.headers/conftest.c Executing: tau_cc.sh -E -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.headers /tmp/petsc-U9YCMv/config.headers/conftest.c sh: # 1 "/tmp/petsc-U9YCMv/config.headers/conftest.c" # 1 "" # 1 "/tmp/petsc-U9YCMv/config.headers/conftest.c" # 1 "/tmp/petsc-U9YCMv/config.headers/confdefs.h" 1 # 2 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 # 1 "/tmp/petsc-U9YCMv/config.headers/conffix.h" 1 # 3 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 Possible ERROR while running preprocessor: /tmp/petsc-U9YCMv/config.headers/conftest.c:3:17: fatal error: dos.h: No such file or directory compilation terminated. make: *** [all] Error 1 ret = 256 error message = {/tmp/petsc-U9YCMv/config.headers/conftest.c:3:17: fatal error: dos.h: No such file or directory compilation terminated. make: *** [all] Error 1 } Source: #include "confdefs.h" #include "conffix.h" #include ================================================================================ TEST check from config.headers(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: WindowsX.h sh: tau_cc.sh -E -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.headers /tmp/petsc-U9YCMv/config.headers/conftest.c Executing: tau_cc.sh -E -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.headers /tmp/petsc-U9YCMv/config.headers/conftest.c sh: # 1 "/tmp/petsc-U9YCMv/config.headers/conftest.c" # 1 "" # 1 "/tmp/petsc-U9YCMv/config.headers/conftest.c" # 1 "/tmp/petsc-U9YCMv/config.headers/confdefs.h" 1 # 2 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 # 1 "/tmp/petsc-U9YCMv/config.headers/conffix.h" 1 # 3 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 Possible ERROR while running preprocessor: /tmp/petsc-U9YCMv/config.headers/conftest.c:3:22: fatal error: WindowsX.h: No such file or directory compilation terminated. make: *** [all] Error 1 ret = 256 error message = {/tmp/petsc-U9YCMv/config.headers/conftest.c:3:22: fatal error: WindowsX.h: No such file or directory compilation terminated. make: *** [all] Error 1 } Source: #include "confdefs.h" #include "conffix.h" #include ================================================================================ TEST check from config.headers(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/sysinfo.h sh: tau_cc.sh -E -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.headers /tmp/petsc-U9YCMv/config.headers/conftest.c Executing: tau_cc.sh -E -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.headers /tmp/petsc-U9YCMv/config.headers/conftest.c sh: # 1 "/tmp/petsc-U9YCMv/config.headers/conftest.c" # 1 "" # 1 "/tmp/petsc-U9YCMv/config.headers/conftest.c" # 1 "/tmp/petsc-U9YCMv/config.headers/confdefs.h" 1 # 2 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 # 1 "/tmp/petsc-U9YCMv/config.headers/conffix.h" 1 # 3 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 # 1 "/usr/include/x86_64-linux-gnu/sys/sysinfo.h" 1 3 4 # 21 "/usr/include/x86_64-linux-gnu/sys/sysinfo.h" 3 4 # 1 "/usr/include/features.h" 1 3 4 # 341 "/usr/include/features.h" 3 4 # 1 "/usr/include/stdc-predef.h" 1 3 4 # 30 "/usr/include/stdc-predef.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/predefs.h" 1 3 4 # 31 "/usr/include/stdc-predef.h" 2 3 4 # 342 "/usr/include/features.h" 2 3 4 # 371 "/usr/include/features.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/sys/cdefs.h" 1 3 4 # 385 "/usr/include/x86_64-linux-gnu/sys/cdefs.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/wordsize.h" 1 3 4 # 386 "/usr/include/x86_64-linux-gnu/sys/cdefs.h" 2 3 4 # 372 "/usr/include/features.h" 2 3 4 # 395 "/usr/include/features.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/gnu/stubs.h" 1 3 4 # 10 "/usr/include/x86_64-linux-gnu/gnu/stubs.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/gnu/stubs-64.h" 1 3 4 # 11 "/usr/include/x86_64-linux-gnu/gnu/stubs.h" 2 3 4 # 396 "/usr/include/features.h" 2 3 4 # 22 "/usr/include/x86_64-linux-gnu/sys/sysinfo.h" 2 3 4 # 1 "/usr/include/linux/kernel.h" 1 3 4 # 1 "/usr/include/linux/sysinfo.h" 1 3 4 # 1 "/usr/include/linux/types.h" 1 3 4 # 1 "/usr/include/x86_64-linux-gnu/asm/types.h" 1 3 4 # 1 "/usr/include/asm-generic/types.h" 1 3 4 # 1 "/usr/include/asm-generic/int-ll64.h" 1 3 4 # 11 "/usr/include/asm-generic/int-ll64.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/asm/bitsperlong.h" 1 3 4 # 10 "/usr/include/x86_64-linux-gnu/asm/bitsperlong.h" 3 4 # 1 "/usr/include/asm-generic/bitsperlong.h" 1 3 4 # 11 "/usr/include/x86_64-linux-gnu/asm/bitsperlong.h" 2 3 4 # 12 "/usr/include/asm-generic/int-ll64.h" 2 3 4 typedef __signed__ char __s8; typedef unsigned char __u8; typedef __signed__ short __s16; typedef unsigned short __u16; typedef __signed__ int __s32; typedef unsigned int __u32; __extension__ typedef __signed__ long long __s64; __extension__ typedef unsigned long long __u64; # 8 "/usr/include/asm-generic/types.h" 2 3 4 # 5 "/usr/include/x86_64-linux-gnu/asm/types.h" 2 3 4 # 5 "/usr/include/linux/types.h" 2 3 4 # 1 "/usr/include/linux/posix_types.h" 1 3 4 # 1 "/usr/include/linux/stddef.h" 1 3 4 # 5 "/usr/include/linux/posix_types.h" 2 3 4 # 24 "/usr/include/linux/posix_types.h" 3 4 typedef struct { unsigned long fds_bits[1024 / (8 * sizeof(long))]; } __kernel_fd_set; typedef void (*__kernel_sighandler_t)(int); typedef int __kernel_key_t; typedef int __kernel_mqd_t; # 1 "/usr/include/x86_64-linux-gnu/asm/posix_types.h" 1 3 4 # 1 "/usr/include/x86_64-linux-gnu/asm/posix_types_64.h" 1 3 4 # 10 "/usr/include/x86_64-linux-gnu/asm/posix_types_64.h" 3 4 typedef unsigned short __kernel_old_uid_t; typedef unsigned short __kernel_old_gid_t; typedef unsigned long __kernel_old_dev_t; # 1 "/usr/include/asm-generic/posix_types.h" 1 3 4 # 14 "/usr/include/asm-generic/posix_types.h" 3 4 typedef long __kernel_long_t; typedef unsigned long __kernel_ulong_t; typedef __kernel_ulong_t __kernel_ino_t; typedef unsigned int __kernel_mode_t; typedef int __kernel_pid_t; typedef int __kernel_ipc_pid_t; typedef unsigned int __kernel_uid_t; typedef unsigned int __kernel_gid_t; typedef __kernel_long_t __kernel_suseconds_t; typedef int __kernel_daddr_t; typedef unsigned int __kernel_uid32_t; typedef unsigned int __kernel_gid32_t; # 71 "/usr/include/asm-generic/posix_types.h" 3 4 typedef __kernel_ulong_t __kernel_size_t; typedef __kernel_long_t __kernel_ssize_t; typedef __kernel_long_t __kernel_ptrdiff_t; typedef struct { int val[2]; } __kernel_fsid_t; typedef __kernel_long_t __kernel_off_t; typedef long long __kernel_loff_t; typedef __kernel_long_t __kernel_time_t; typedef __kernel_long_t __kernel_clock_t; typedef int __kernel_timer_t; typedef int __kernel_clockid_t; typedef char * __kernel_caddr_t; typedef unsigned short __kernel_uid16_t; typedef unsigned short __kernel_gid16_t; # 18 "/usr/include/x86_64-linux-gnu/asm/posix_types_64.h" 2 3 4 # 7 "/usr/include/x86_64-linux-gnu/asm/posix_types.h" 2 3 4 # 36 "/usr/include/linux/posix_types.h" 2 3 4 # 9 "/usr/include/linux/types.h" 2 3 4 # 27 "/usr/include/linux/types.h" 3 4 typedef __u16 __le16; typedef __u16 __be16; typedef __u32 __le32; typedef __u32 __be32; typedef __u64 __le64; typedef __u64 __be64; typedef __u16 __sum16; typedef __u32 __wsum; # 5 "/usr/include/linux/sysinfo.h" 2 3 4 struct sysinfo { __kernel_long_t uptime; __kernel_ulong_t loads[3]; __kernel_ulong_t totalram; __kernel_ulong_t freeram; __kernel_ulong_t sharedram; __kernel_ulong_t bufferram; __kernel_ulong_t totalswap; __kernel_ulong_t freeswap; __u16 procs; __u16 pad; __kernel_ulong_t totalhigh; __kernel_ulong_t freehigh; __u32 mem_unit; char _f[20-2*sizeof(__kernel_ulong_t)-sizeof(__u32)]; }; # 5 "/usr/include/linux/kernel.h" 2 3 4 # 25 "/usr/include/x86_64-linux-gnu/sys/sysinfo.h" 2 3 4 extern int sysinfo (struct sysinfo *__info) __attribute__ ((__nothrow__ , __leaf__)); extern int get_nprocs_conf (void) __attribute__ ((__nothrow__ , __leaf__)); extern int get_nprocs (void) __attribute__ ((__nothrow__ , __leaf__)); extern long int get_phys_pages (void) __attribute__ ((__nothrow__ , __leaf__)); extern long int get_avphys_pages (void) __attribute__ ((__nothrow__ , __leaf__)); # 3 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 Defined "HAVE_SYS_SYSINFO_H" to "1" ================================================================================ TEST check from config.headers(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/wait.h sh: tau_cc.sh -E -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.headers /tmp/petsc-U9YCMv/config.headers/conftest.c Executing: tau_cc.sh -E -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.headers /tmp/petsc-U9YCMv/config.headers/conftest.c sh: # 1 "/tmp/petsc-U9YCMv/config.headers/conftest.c" # 1 "" # 1 "/tmp/petsc-U9YCMv/config.headers/conftest.c" # 1 "/tmp/petsc-U9YCMv/config.headers/confdefs.h" 1 # 2 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 # 1 "/tmp/petsc-U9YCMv/config.headers/conffix.h" 1 # 3 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 # 1 "/usr/include/x86_64-linux-gnu/sys/wait.h" 1 3 4 # 26 "/usr/include/x86_64-linux-gnu/sys/wait.h" 3 4 # 1 "/usr/include/features.h" 1 3 4 # 341 "/usr/include/features.h" 3 4 # 1 "/usr/include/stdc-predef.h" 1 3 4 # 30 "/usr/include/stdc-predef.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/predefs.h" 1 3 4 # 31 "/usr/include/stdc-predef.h" 2 3 4 # 342 "/usr/include/features.h" 2 3 4 # 371 "/usr/include/features.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/sys/cdefs.h" 1 3 4 # 385 "/usr/include/x86_64-linux-gnu/sys/cdefs.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/wordsize.h" 1 3 4 # 386 "/usr/include/x86_64-linux-gnu/sys/cdefs.h" 2 3 4 # 372 "/usr/include/features.h" 2 3 4 # 395 "/usr/include/features.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/gnu/stubs.h" 1 3 4 # 10 "/usr/include/x86_64-linux-gnu/gnu/stubs.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/gnu/stubs-64.h" 1 3 4 # 11 "/usr/include/x86_64-linux-gnu/gnu/stubs.h" 2 3 4 # 396 "/usr/include/features.h" 2 3 4 # 27 "/usr/include/x86_64-linux-gnu/sys/wait.h" 2 3 4 # 1 "/usr/include/signal.h" 1 3 4 # 30 "/usr/include/signal.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/sigset.h" 1 3 4 # 23 "/usr/include/x86_64-linux-gnu/bits/sigset.h" 3 4 typedef int __sig_atomic_t; typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; # 103 "/usr/include/x86_64-linux-gnu/bits/sigset.h" 3 4 extern int __sigismember (const __sigset_t *, int); extern int __sigaddset (__sigset_t *, int); extern int __sigdelset (__sigset_t *, int); # 33 "/usr/include/signal.h" 2 3 4 typedef __sig_atomic_t sig_atomic_t; typedef __sigset_t sigset_t; # 1 "/usr/include/x86_64-linux-gnu/bits/types.h" 1 3 4 # 27 "/usr/include/x86_64-linux-gnu/bits/types.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/wordsize.h" 1 3 4 # 28 "/usr/include/x86_64-linux-gnu/bits/types.h" 2 3 4 typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; # 130 "/usr/include/x86_64-linux-gnu/bits/types.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/typesizes.h" 1 3 4 # 131 "/usr/include/x86_64-linux-gnu/bits/types.h" 2 3 4 typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned long int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef long int __suseconds_t; typedef int __daddr_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __fsword_t; typedef long int __ssize_t; typedef long int __syscall_slong_t; typedef unsigned long int __syscall_ulong_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; # 57 "/usr/include/signal.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/signum.h" 1 3 4 # 58 "/usr/include/signal.h" 2 3 4 typedef __pid_t pid_t; typedef __uid_t uid_t; # 1 "/usr/include/time.h" 1 3 4 # 120 "/usr/include/time.h" 3 4 struct timespec { __time_t tv_sec; __syscall_slong_t tv_nsec; }; # 76 "/usr/include/signal.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/siginfo.h" 1 3 4 # 24 "/usr/include/x86_64-linux-gnu/bits/siginfo.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/wordsize.h" 1 3 4 # 25 "/usr/include/x86_64-linux-gnu/bits/siginfo.h" 2 3 4 typedef union sigval { int sival_int; void *sival_ptr; } sigval_t; # 58 "/usr/include/x86_64-linux-gnu/bits/siginfo.h" 3 4 typedef __clock_t __sigchld_clock_t; typedef struct { int si_signo; int si_errno; int si_code; union { int _pad[((128 / sizeof (int)) - 4)]; struct { __pid_t si_pid; __uid_t si_uid; } _kill; struct { int si_tid; int si_overrun; sigval_t si_sigval; } _timer; struct { __pid_t si_pid; __uid_t si_uid; sigval_t si_sigval; } _rt; struct { __pid_t si_pid; __uid_t si_uid; int si_status; __sigchld_clock_t si_utime; __sigchld_clock_t si_stime; } _sigchld; struct { void *si_addr; } _sigfault; struct { long int si_band; int si_fd; } _sigpoll; struct { void *_call_addr; int _syscall; unsigned int _arch; } _sigsys; } _sifields; } siginfo_t ; # 151 "/usr/include/x86_64-linux-gnu/bits/siginfo.h" 3 4 enum { SI_ASYNCNL = -60, SI_TKILL = -6, SI_SIGIO, SI_ASYNCIO, SI_MESGQ, SI_TIMER, SI_QUEUE, SI_USER, SI_KERNEL = 0x80 }; enum { ILL_ILLOPC = 1, ILL_ILLOPN, ILL_ILLADR, ILL_ILLTRP, ILL_PRVOPC, ILL_PRVREG, ILL_COPROC, ILL_BADSTK }; enum { FPE_INTDIV = 1, FPE_INTOVF, FPE_FLTDIV, FPE_FLTOVF, FPE_FLTUND, FPE_FLTRES, FPE_FLTINV, FPE_FLTSUB }; enum { SEGV_MAPERR = 1, SEGV_ACCERR }; enum { BUS_ADRALN = 1, BUS_ADRERR, BUS_OBJERR }; enum { TRAP_BRKPT = 1, TRAP_TRACE }; enum { CLD_EXITED = 1, CLD_KILLED, CLD_DUMPED, CLD_TRAPPED, CLD_STOPPED, CLD_CONTINUED }; enum { POLL_IN = 1, POLL_OUT, POLL_MSG, POLL_ERR, POLL_PRI, POLL_HUP }; # 297 "/usr/include/x86_64-linux-gnu/bits/siginfo.h" 3 4 typedef union pthread_attr_t pthread_attr_t; typedef struct sigevent { sigval_t sigev_value; int sigev_signo; int sigev_notify; union { int _pad[((64 / sizeof (int)) - 4)]; __pid_t _tid; struct { void (*_function) (sigval_t); pthread_attr_t *_attribute; } _sigev_thread; } _sigev_un; } sigevent_t; enum { SIGEV_SIGNAL = 0, SIGEV_NONE, SIGEV_THREAD, SIGEV_THREAD_ID = 4 }; # 81 "/usr/include/signal.h" 2 3 4 typedef void (*__sighandler_t) (int); extern __sighandler_t __sysv_signal (int __sig, __sighandler_t __handler) __attribute__ ((__nothrow__ , __leaf__)); # 100 "/usr/include/signal.h" 3 4 extern __sighandler_t signal (int __sig, __sighandler_t __handler) __attribute__ ((__nothrow__ , __leaf__)); # 114 "/usr/include/signal.h" 3 4 # 127 "/usr/include/signal.h" 3 4 extern int kill (__pid_t __pid, int __sig) __attribute__ ((__nothrow__ , __leaf__)); extern int killpg (__pid_t __pgrp, int __sig) __attribute__ ((__nothrow__ , __leaf__)); extern int raise (int __sig) __attribute__ ((__nothrow__ , __leaf__)); extern __sighandler_t ssignal (int __sig, __sighandler_t __handler) __attribute__ ((__nothrow__ , __leaf__)); extern int gsignal (int __sig) __attribute__ ((__nothrow__ , __leaf__)); extern void psignal (int __sig, const char *__s); extern void psiginfo (const siginfo_t *__pinfo, const char *__s); # 169 "/usr/include/signal.h" 3 4 extern int __sigpause (int __sig_or_mask, int __is_sig); # 197 "/usr/include/signal.h" 3 4 extern int sigblock (int __mask) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__deprecated__)); extern int sigsetmask (int __mask) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__deprecated__)); extern int siggetmask (void) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__deprecated__)); # 217 "/usr/include/signal.h" 3 4 typedef __sighandler_t sig_t; extern int sigemptyset (sigset_t *__set) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern int sigfillset (sigset_t *__set) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern int sigaddset (sigset_t *__set, int __signo) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern int sigdelset (sigset_t *__set, int __signo) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern int sigismember (const sigset_t *__set, int __signo) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); # 253 "/usr/include/signal.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/sigaction.h" 1 3 4 # 24 "/usr/include/x86_64-linux-gnu/bits/sigaction.h" 3 4 struct sigaction { union { __sighandler_t sa_handler; void (*sa_sigaction) (int, siginfo_t *, void *); } __sigaction_handler; __sigset_t sa_mask; int sa_flags; void (*sa_restorer) (void); }; # 254 "/usr/include/signal.h" 2 3 4 extern int sigprocmask (int __how, const sigset_t *__restrict __set, sigset_t *__restrict __oset) __attribute__ ((__nothrow__ , __leaf__)); extern int sigsuspend (const sigset_t *__set) __attribute__ ((__nonnull__ (1))); extern int sigaction (int __sig, const struct sigaction *__restrict __act, struct sigaction *__restrict __oact) __attribute__ ((__nothrow__ , __leaf__)); extern int sigpending (sigset_t *__set) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern int sigwait (const sigset_t *__restrict __set, int *__restrict __sig) __attribute__ ((__nonnull__ (1, 2))); extern int sigwaitinfo (const sigset_t *__restrict __set, siginfo_t *__restrict __info) __attribute__ ((__nonnull__ (1))); extern int sigtimedwait (const sigset_t *__restrict __set, siginfo_t *__restrict __info, const struct timespec *__restrict __timeout) __attribute__ ((__nonnull__ (1))); extern int sigqueue (__pid_t __pid, int __sig, const union sigval __val) __attribute__ ((__nothrow__ , __leaf__)); # 311 "/usr/include/signal.h" 3 4 extern const char *const _sys_siglist[65]; extern const char *const sys_siglist[65]; struct sigvec { __sighandler_t sv_handler; int sv_mask; int sv_flags; }; # 335 "/usr/include/signal.h" 3 4 extern int sigvec (int __sig, const struct sigvec *__vec, struct sigvec *__ovec) __attribute__ ((__nothrow__ , __leaf__)); # 1 "/usr/include/x86_64-linux-gnu/bits/sigcontext.h" 1 3 4 # 29 "/usr/include/x86_64-linux-gnu/bits/sigcontext.h" 3 4 struct _fpx_sw_bytes { __uint32_t magic1; __uint32_t extended_size; __uint64_t xstate_bv; __uint32_t xstate_size; __uint32_t padding[7]; }; struct _fpreg { unsigned short significand[4]; unsigned short exponent; }; struct _fpxreg { unsigned short significand[4]; unsigned short exponent; unsigned short padding[3]; }; struct _xmmreg { __uint32_t element[4]; }; # 121 "/usr/include/x86_64-linux-gnu/bits/sigcontext.h" 3 4 struct _fpstate { __uint16_t cwd; __uint16_t swd; __uint16_t ftw; __uint16_t fop; __uint64_t rip; __uint64_t rdp; __uint32_t mxcsr; __uint32_t mxcr_mask; struct _fpxreg _st[8]; struct _xmmreg _xmm[16]; __uint32_t padding[24]; }; struct sigcontext { __uint64_t r8; __uint64_t r9; __uint64_t r10; __uint64_t r11; __uint64_t r12; __uint64_t r13; __uint64_t r14; __uint64_t r15; __uint64_t rdi; __uint64_t rsi; __uint64_t rbp; __uint64_t rbx; __uint64_t rdx; __uint64_t rax; __uint64_t rcx; __uint64_t rsp; __uint64_t rip; __uint64_t eflags; unsigned short cs; unsigned short gs; unsigned short fs; unsigned short __pad0; __uint64_t err; __uint64_t trapno; __uint64_t oldmask; __uint64_t cr2; __extension__ union { struct _fpstate * fpstate; __uint64_t __fpstate_word; }; __uint64_t __reserved1 [8]; }; struct _xsave_hdr { __uint64_t xstate_bv; __uint64_t reserved1[2]; __uint64_t reserved2[5]; }; struct _ymmh_state { __uint32_t ymmh_space[64]; }; struct _xstate { struct _fpstate fpstate; struct _xsave_hdr xstate_hdr; struct _ymmh_state ymmh; }; # 341 "/usr/include/signal.h" 2 3 4 extern int sigreturn (struct sigcontext *__scp) __attribute__ ((__nothrow__ , __leaf__)); # 1 "/usr/lib/gcc/x86_64-linux-gnu/4.7/include/stddef.h" 1 3 4 # 213 "/usr/lib/gcc/x86_64-linux-gnu/4.7/include/stddef.h" 3 4 typedef long unsigned int size_t; # 351 "/usr/include/signal.h" 2 3 4 extern int siginterrupt (int __sig, int __interrupt) __attribute__ ((__nothrow__ , __leaf__)); # 1 "/usr/include/x86_64-linux-gnu/bits/sigstack.h" 1 3 4 # 25 "/usr/include/x86_64-linux-gnu/bits/sigstack.h" 3 4 struct sigstack { void *ss_sp; int ss_onstack; }; enum { SS_ONSTACK = 1, SS_DISABLE }; # 49 "/usr/include/x86_64-linux-gnu/bits/sigstack.h" 3 4 typedef struct sigaltstack { void *ss_sp; int ss_flags; size_t ss_size; } stack_t; # 358 "/usr/include/signal.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/sys/ucontext.h" 1 3 4 # 22 "/usr/include/x86_64-linux-gnu/sys/ucontext.h" 3 4 # 1 "/usr/include/signal.h" 1 3 4 # 23 "/usr/include/x86_64-linux-gnu/sys/ucontext.h" 2 3 4 # 31 "/usr/include/x86_64-linux-gnu/sys/ucontext.h" 3 4 __extension__ typedef long long int greg_t; typedef greg_t gregset_t[23]; # 92 "/usr/include/x86_64-linux-gnu/sys/ucontext.h" 3 4 struct _libc_fpxreg { unsigned short int significand[4]; unsigned short int exponent; unsigned short int padding[3]; }; struct _libc_xmmreg { __uint32_t element[4]; }; struct _libc_fpstate { __uint16_t cwd; __uint16_t swd; __uint16_t ftw; __uint16_t fop; __uint64_t rip; __uint64_t rdp; __uint32_t mxcsr; __uint32_t mxcr_mask; struct _libc_fpxreg _st[8]; struct _libc_xmmreg _xmm[16]; __uint32_t padding[24]; }; typedef struct _libc_fpstate *fpregset_t; typedef struct { gregset_t gregs; fpregset_t fpregs; __extension__ unsigned long long __reserved1 [8]; } mcontext_t; typedef struct ucontext { unsigned long int uc_flags; struct ucontext *uc_link; stack_t uc_stack; mcontext_t uc_mcontext; __sigset_t uc_sigmask; struct _libc_fpstate __fpregs_mem; } ucontext_t; # 361 "/usr/include/signal.h" 2 3 4 extern int sigstack (struct sigstack *__ss, struct sigstack *__oss) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__deprecated__)); extern int sigaltstack (const struct sigaltstack *__restrict __ss, struct sigaltstack *__restrict __oss) __attribute__ ((__nothrow__ , __leaf__)); # 395 "/usr/include/signal.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/pthreadtypes.h" 1 3 4 # 21 "/usr/include/x86_64-linux-gnu/bits/pthreadtypes.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/wordsize.h" 1 3 4 # 22 "/usr/include/x86_64-linux-gnu/bits/pthreadtypes.h" 2 3 4 # 60 "/usr/include/x86_64-linux-gnu/bits/pthreadtypes.h" 3 4 typedef unsigned long int pthread_t; union pthread_attr_t { char __size[56]; long int __align; }; typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; # 90 "/usr/include/x86_64-linux-gnu/bits/pthreadtypes.h" 3 4 typedef union { struct __pthread_mutex_s { int __lock; unsigned int __count; int __owner; unsigned int __nusers; int __kind; int __spins; __pthread_list_t __list; # 115 "/usr/include/x86_64-linux-gnu/bits/pthreadtypes.h" 3 4 } __data; char __size[40]; long int __align; } pthread_mutex_t; typedef union { char __size[4]; int __align; } pthread_mutexattr_t; typedef union { struct { int __lock; unsigned int __futex; __extension__ unsigned long long int __total_seq; __extension__ unsigned long long int __wakeup_seq; __extension__ unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; __extension__ long long int __align; } pthread_cond_t; typedef union { char __size[4]; int __align; } pthread_condattr_t; typedef unsigned int pthread_key_t; typedef int pthread_once_t; typedef union { struct { int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; unsigned int __flags; } __data; # 202 "/usr/include/x86_64-linux-gnu/bits/pthreadtypes.h" 3 4 char __size[56]; long int __align; } pthread_rwlock_t; typedef union { char __size[8]; long int __align; } pthread_rwlockattr_t; typedef volatile int pthread_spinlock_t; typedef union { char __size[32]; long int __align; } pthread_barrier_t; typedef union { char __size[4]; int __align; } pthread_barrierattr_t; # 396 "/usr/include/signal.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/sigthread.h" 1 3 4 # 30 "/usr/include/x86_64-linux-gnu/bits/sigthread.h" 3 4 extern int pthread_sigmask (int __how, const __sigset_t *__restrict __newmask, __sigset_t *__restrict __oldmask)__attribute__ ((__nothrow__ , __leaf__)); extern int pthread_kill (pthread_t __threadid, int __signo) __attribute__ ((__nothrow__ , __leaf__)); # 397 "/usr/include/signal.h" 2 3 4 extern int __libc_current_sigrtmin (void) __attribute__ ((__nothrow__ , __leaf__)); extern int __libc_current_sigrtmax (void) __attribute__ ((__nothrow__ , __leaf__)); # 31 "/usr/include/x86_64-linux-gnu/sys/wait.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/waitflags.h" 1 3 4 # 37 "/usr/include/x86_64-linux-gnu/sys/wait.h" 2 3 4 # 61 "/usr/include/x86_64-linux-gnu/sys/wait.h" 3 4 typedef union { union wait *__uptr; int *__iptr; } __WAIT_STATUS __attribute__ ((__transparent_union__)); # 78 "/usr/include/x86_64-linux-gnu/sys/wait.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/waitstatus.h" 1 3 4 # 64 "/usr/include/x86_64-linux-gnu/bits/waitstatus.h" 3 4 # 1 "/usr/include/endian.h" 1 3 4 # 36 "/usr/include/endian.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/endian.h" 1 3 4 # 37 "/usr/include/endian.h" 2 3 4 # 60 "/usr/include/endian.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/byteswap.h" 1 3 4 # 28 "/usr/include/x86_64-linux-gnu/bits/byteswap.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/wordsize.h" 1 3 4 # 29 "/usr/include/x86_64-linux-gnu/bits/byteswap.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/byteswap-16.h" 1 3 4 # 36 "/usr/include/x86_64-linux-gnu/bits/byteswap.h" 2 3 4 # 44 "/usr/include/x86_64-linux-gnu/bits/byteswap.h" 3 4 static __inline unsigned int __bswap_32 (unsigned int __bsx) { return __builtin_bswap32 (__bsx); } # 108 "/usr/include/x86_64-linux-gnu/bits/byteswap.h" 3 4 static __inline __uint64_t __bswap_64 (__uint64_t __bsx) { return __builtin_bswap64 (__bsx); } # 61 "/usr/include/endian.h" 2 3 4 # 65 "/usr/include/x86_64-linux-gnu/bits/waitstatus.h" 2 3 4 union wait { int w_status; struct { unsigned int __w_termsig:7; unsigned int __w_coredump:1; unsigned int __w_retcode:8; unsigned int:16; } __wait_terminated; struct { unsigned int __w_stopval:8; unsigned int __w_stopsig:8; unsigned int:16; } __wait_stopped; }; # 79 "/usr/include/x86_64-linux-gnu/sys/wait.h" 2 3 4 # 100 "/usr/include/x86_64-linux-gnu/sys/wait.h" 3 4 typedef enum { P_ALL, P_PID, P_PGID } idtype_t; # 114 "/usr/include/x86_64-linux-gnu/sys/wait.h" 3 4 extern __pid_t wait (__WAIT_STATUS __stat_loc); # 137 "/usr/include/x86_64-linux-gnu/sys/wait.h" 3 4 extern __pid_t waitpid (__pid_t __pid, int *__stat_loc, int __options); typedef __id_t id_t; # 1 "/usr/include/x86_64-linux-gnu/bits/siginfo.h" 1 3 4 # 24 "/usr/include/x86_64-linux-gnu/bits/siginfo.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/wordsize.h" 1 3 4 # 25 "/usr/include/x86_64-linux-gnu/bits/siginfo.h" 2 3 4 # 148 "/usr/include/x86_64-linux-gnu/sys/wait.h" 2 3 4 # 160 "/usr/include/x86_64-linux-gnu/sys/wait.h" 3 4 extern int waitid (idtype_t __idtype, __id_t __id, siginfo_t *__infop, int __options); struct rusage; extern __pid_t wait3 (__WAIT_STATUS __stat_loc, int __options, struct rusage * __usage) __attribute__ ((__nothrow__)); extern __pid_t wait4 (__pid_t __pid, __WAIT_STATUS __stat_loc, int __options, struct rusage *__usage) __attribute__ ((__nothrow__)); # 3 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 Defined "HAVE_SYS_WAIT_H" to "1" ================================================================================ TEST check from config.headers(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: stdlib.h sh: tau_cc.sh -E -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.headers /tmp/petsc-U9YCMv/config.headers/conftest.c Executing: tau_cc.sh -E -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.headers /tmp/petsc-U9YCMv/config.headers/conftest.c sh: # 1 "/tmp/petsc-U9YCMv/config.headers/conftest.c" # 1 "" # 1 "/tmp/petsc-U9YCMv/config.headers/conftest.c" # 1 "/tmp/petsc-U9YCMv/config.headers/confdefs.h" 1 # 2 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 # 1 "/tmp/petsc-U9YCMv/config.headers/conffix.h" 1 # 3 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 # 1 "/usr/include/stdlib.h" 1 3 4 # 24 "/usr/include/stdlib.h" 3 4 # 1 "/usr/include/features.h" 1 3 4 # 341 "/usr/include/features.h" 3 4 # 1 "/usr/include/stdc-predef.h" 1 3 4 # 30 "/usr/include/stdc-predef.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/predefs.h" 1 3 4 # 31 "/usr/include/stdc-predef.h" 2 3 4 # 342 "/usr/include/features.h" 2 3 4 # 371 "/usr/include/features.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/sys/cdefs.h" 1 3 4 # 385 "/usr/include/x86_64-linux-gnu/sys/cdefs.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/wordsize.h" 1 3 4 # 386 "/usr/include/x86_64-linux-gnu/sys/cdefs.h" 2 3 4 # 372 "/usr/include/features.h" 2 3 4 # 395 "/usr/include/features.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/gnu/stubs.h" 1 3 4 # 10 "/usr/include/x86_64-linux-gnu/gnu/stubs.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/gnu/stubs-64.h" 1 3 4 # 11 "/usr/include/x86_64-linux-gnu/gnu/stubs.h" 2 3 4 # 396 "/usr/include/features.h" 2 3 4 # 25 "/usr/include/stdlib.h" 2 3 4 # 1 "/usr/lib/gcc/x86_64-linux-gnu/4.7/include/stddef.h" 1 3 4 # 213 "/usr/lib/gcc/x86_64-linux-gnu/4.7/include/stddef.h" 3 4 typedef long unsigned int size_t; # 325 "/usr/lib/gcc/x86_64-linux-gnu/4.7/include/stddef.h" 3 4 typedef int wchar_t; # 33 "/usr/include/stdlib.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/waitflags.h" 1 3 4 # 42 "/usr/include/stdlib.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/waitstatus.h" 1 3 4 # 64 "/usr/include/x86_64-linux-gnu/bits/waitstatus.h" 3 4 # 1 "/usr/include/endian.h" 1 3 4 # 36 "/usr/include/endian.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/endian.h" 1 3 4 # 37 "/usr/include/endian.h" 2 3 4 # 60 "/usr/include/endian.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/byteswap.h" 1 3 4 # 27 "/usr/include/x86_64-linux-gnu/bits/byteswap.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/types.h" 1 3 4 # 27 "/usr/include/x86_64-linux-gnu/bits/types.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/wordsize.h" 1 3 4 # 28 "/usr/include/x86_64-linux-gnu/bits/types.h" 2 3 4 typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; # 130 "/usr/include/x86_64-linux-gnu/bits/types.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/typesizes.h" 1 3 4 # 131 "/usr/include/x86_64-linux-gnu/bits/types.h" 2 3 4 typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned long int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef long int __suseconds_t; typedef int __daddr_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __fsword_t; typedef long int __ssize_t; typedef long int __syscall_slong_t; typedef unsigned long int __syscall_ulong_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; # 28 "/usr/include/x86_64-linux-gnu/bits/byteswap.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/wordsize.h" 1 3 4 # 29 "/usr/include/x86_64-linux-gnu/bits/byteswap.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/byteswap-16.h" 1 3 4 # 36 "/usr/include/x86_64-linux-gnu/bits/byteswap.h" 2 3 4 # 44 "/usr/include/x86_64-linux-gnu/bits/byteswap.h" 3 4 static __inline unsigned int __bswap_32 (unsigned int __bsx) { return __builtin_bswap32 (__bsx); } # 108 "/usr/include/x86_64-linux-gnu/bits/byteswap.h" 3 4 static __inline __uint64_t __bswap_64 (__uint64_t __bsx) { return __builtin_bswap64 (__bsx); } # 61 "/usr/include/endian.h" 2 3 4 # 65 "/usr/include/x86_64-linux-gnu/bits/waitstatus.h" 2 3 4 union wait { int w_status; struct { unsigned int __w_termsig:7; unsigned int __w_coredump:1; unsigned int __w_retcode:8; unsigned int:16; } __wait_terminated; struct { unsigned int __w_stopval:8; unsigned int __w_stopsig:8; unsigned int:16; } __wait_stopped; }; # 43 "/usr/include/stdlib.h" 2 3 4 # 67 "/usr/include/stdlib.h" 3 4 typedef union { union wait *__uptr; int *__iptr; } __WAIT_STATUS __attribute__ ((__transparent_union__)); # 95 "/usr/include/stdlib.h" 3 4 typedef struct { int quot; int rem; } div_t; typedef struct { long int quot; long int rem; } ldiv_t; __extension__ typedef struct { long long int quot; long long int rem; } lldiv_t; # 139 "/usr/include/stdlib.h" 3 4 extern size_t __ctype_get_mb_cur_max (void) __attribute__ ((__nothrow__ , __leaf__)) ; extern double atof (const char *__nptr) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1))) ; extern int atoi (const char *__nptr) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1))) ; extern long int atol (const char *__nptr) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1))) ; __extension__ extern long long int atoll (const char *__nptr) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1))) ; extern double strtod (const char *__restrict __nptr, char **__restrict __endptr) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern float strtof (const char *__restrict __nptr, char **__restrict __endptr) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern long double strtold (const char *__restrict __nptr, char **__restrict __endptr) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern long int strtol (const char *__restrict __nptr, char **__restrict __endptr, int __base) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern unsigned long int strtoul (const char *__restrict __nptr, char **__restrict __endptr, int __base) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); __extension__ extern long long int strtoq (const char *__restrict __nptr, char **__restrict __endptr, int __base) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); __extension__ extern unsigned long long int strtouq (const char *__restrict __nptr, char **__restrict __endptr, int __base) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); __extension__ extern long long int strtoll (const char *__restrict __nptr, char **__restrict __endptr, int __base) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); __extension__ extern unsigned long long int strtoull (const char *__restrict __nptr, char **__restrict __endptr, int __base) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); # 305 "/usr/include/stdlib.h" 3 4 extern char *l64a (long int __n) __attribute__ ((__nothrow__ , __leaf__)) ; extern long int a64l (const char *__s) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1))) ; # 1 "/usr/include/x86_64-linux-gnu/sys/types.h" 1 3 4 # 27 "/usr/include/x86_64-linux-gnu/sys/types.h" 3 4 typedef __u_char u_char; typedef __u_short u_short; typedef __u_int u_int; typedef __u_long u_long; typedef __quad_t quad_t; typedef __u_quad_t u_quad_t; typedef __fsid_t fsid_t; typedef __loff_t loff_t; typedef __ino_t ino_t; # 60 "/usr/include/x86_64-linux-gnu/sys/types.h" 3 4 typedef __dev_t dev_t; typedef __gid_t gid_t; typedef __mode_t mode_t; typedef __nlink_t nlink_t; typedef __uid_t uid_t; typedef __off_t off_t; # 98 "/usr/include/x86_64-linux-gnu/sys/types.h" 3 4 typedef __pid_t pid_t; typedef __id_t id_t; typedef __ssize_t ssize_t; typedef __daddr_t daddr_t; typedef __caddr_t caddr_t; typedef __key_t key_t; # 132 "/usr/include/x86_64-linux-gnu/sys/types.h" 3 4 # 1 "/usr/include/time.h" 1 3 4 # 57 "/usr/include/time.h" 3 4 typedef __clock_t clock_t; # 73 "/usr/include/time.h" 3 4 typedef __time_t time_t; # 91 "/usr/include/time.h" 3 4 typedef __clockid_t clockid_t; # 103 "/usr/include/time.h" 3 4 typedef __timer_t timer_t; # 133 "/usr/include/x86_64-linux-gnu/sys/types.h" 2 3 4 # 146 "/usr/include/x86_64-linux-gnu/sys/types.h" 3 4 # 1 "/usr/lib/gcc/x86_64-linux-gnu/4.7/include/stddef.h" 1 3 4 # 147 "/usr/include/x86_64-linux-gnu/sys/types.h" 2 3 4 typedef unsigned long int ulong; typedef unsigned short int ushort; typedef unsigned int uint; # 194 "/usr/include/x86_64-linux-gnu/sys/types.h" 3 4 typedef int int8_t __attribute__ ((__mode__ (__QI__))); typedef int int16_t __attribute__ ((__mode__ (__HI__))); typedef int int32_t __attribute__ ((__mode__ (__SI__))); typedef int int64_t __attribute__ ((__mode__ (__DI__))); typedef unsigned int u_int8_t __attribute__ ((__mode__ (__QI__))); typedef unsigned int u_int16_t __attribute__ ((__mode__ (__HI__))); typedef unsigned int u_int32_t __attribute__ ((__mode__ (__SI__))); typedef unsigned int u_int64_t __attribute__ ((__mode__ (__DI__))); typedef int register_t __attribute__ ((__mode__ (__word__))); # 219 "/usr/include/x86_64-linux-gnu/sys/types.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/sys/select.h" 1 3 4 # 30 "/usr/include/x86_64-linux-gnu/sys/select.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/select.h" 1 3 4 # 22 "/usr/include/x86_64-linux-gnu/bits/select.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/wordsize.h" 1 3 4 # 23 "/usr/include/x86_64-linux-gnu/bits/select.h" 2 3 4 # 31 "/usr/include/x86_64-linux-gnu/sys/select.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/sigset.h" 1 3 4 # 23 "/usr/include/x86_64-linux-gnu/bits/sigset.h" 3 4 typedef int __sig_atomic_t; typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; # 34 "/usr/include/x86_64-linux-gnu/sys/select.h" 2 3 4 typedef __sigset_t sigset_t; # 1 "/usr/include/time.h" 1 3 4 # 120 "/usr/include/time.h" 3 4 struct timespec { __time_t tv_sec; __syscall_slong_t tv_nsec; }; # 44 "/usr/include/x86_64-linux-gnu/sys/select.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/time.h" 1 3 4 # 30 "/usr/include/x86_64-linux-gnu/bits/time.h" 3 4 struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; # 46 "/usr/include/x86_64-linux-gnu/sys/select.h" 2 3 4 typedef __suseconds_t suseconds_t; typedef long int __fd_mask; # 64 "/usr/include/x86_64-linux-gnu/sys/select.h" 3 4 typedef struct { __fd_mask __fds_bits[1024 / (8 * (int) sizeof (__fd_mask))]; } fd_set; typedef __fd_mask fd_mask; # 96 "/usr/include/x86_64-linux-gnu/sys/select.h" 3 4 # 106 "/usr/include/x86_64-linux-gnu/sys/select.h" 3 4 extern int select (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, struct timeval *__restrict __timeout); # 118 "/usr/include/x86_64-linux-gnu/sys/select.h" 3 4 extern int pselect (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, const struct timespec *__restrict __timeout, const __sigset_t *__restrict __sigmask); # 131 "/usr/include/x86_64-linux-gnu/sys/select.h" 3 4 # 220 "/usr/include/x86_64-linux-gnu/sys/types.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/sys/sysmacros.h" 1 3 4 # 29 "/usr/include/x86_64-linux-gnu/sys/sysmacros.h" 3 4 __extension__ extern unsigned int gnu_dev_major (unsigned long long int __dev) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); __extension__ extern unsigned int gnu_dev_minor (unsigned long long int __dev) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); __extension__ extern unsigned long long int gnu_dev_makedev (unsigned int __major, unsigned int __minor) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); # 63 "/usr/include/x86_64-linux-gnu/sys/sysmacros.h" 3 4 # 223 "/usr/include/x86_64-linux-gnu/sys/types.h" 2 3 4 typedef __blksize_t blksize_t; typedef __blkcnt_t blkcnt_t; typedef __fsblkcnt_t fsblkcnt_t; typedef __fsfilcnt_t fsfilcnt_t; # 270 "/usr/include/x86_64-linux-gnu/sys/types.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/pthreadtypes.h" 1 3 4 # 21 "/usr/include/x86_64-linux-gnu/bits/pthreadtypes.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/wordsize.h" 1 3 4 # 22 "/usr/include/x86_64-linux-gnu/bits/pthreadtypes.h" 2 3 4 # 60 "/usr/include/x86_64-linux-gnu/bits/pthreadtypes.h" 3 4 typedef unsigned long int pthread_t; union pthread_attr_t { char __size[56]; long int __align; }; typedef union pthread_attr_t pthread_attr_t; typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; # 90 "/usr/include/x86_64-linux-gnu/bits/pthreadtypes.h" 3 4 typedef union { struct __pthread_mutex_s { int __lock; unsigned int __count; int __owner; unsigned int __nusers; int __kind; int __spins; __pthread_list_t __list; # 115 "/usr/include/x86_64-linux-gnu/bits/pthreadtypes.h" 3 4 } __data; char __size[40]; long int __align; } pthread_mutex_t; typedef union { char __size[4]; int __align; } pthread_mutexattr_t; typedef union { struct { int __lock; unsigned int __futex; __extension__ unsigned long long int __total_seq; __extension__ unsigned long long int __wakeup_seq; __extension__ unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; __extension__ long long int __align; } pthread_cond_t; typedef union { char __size[4]; int __align; } pthread_condattr_t; typedef unsigned int pthread_key_t; typedef int pthread_once_t; typedef union { struct { int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; unsigned int __flags; } __data; # 202 "/usr/include/x86_64-linux-gnu/bits/pthreadtypes.h" 3 4 char __size[56]; long int __align; } pthread_rwlock_t; typedef union { char __size[8]; long int __align; } pthread_rwlockattr_t; typedef volatile int pthread_spinlock_t; typedef union { char __size[32]; long int __align; } pthread_barrier_t; typedef union { char __size[4]; int __align; } pthread_barrierattr_t; # 271 "/usr/include/x86_64-linux-gnu/sys/types.h" 2 3 4 # 315 "/usr/include/stdlib.h" 2 3 4 extern long int random (void) __attribute__ ((__nothrow__ , __leaf__)); extern void srandom (unsigned int __seed) __attribute__ ((__nothrow__ , __leaf__)); extern char *initstate (unsigned int __seed, char *__statebuf, size_t __statelen) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (2))); extern char *setstate (char *__statebuf) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); struct random_data { int32_t *fptr; int32_t *rptr; int32_t *state; int rand_type; int rand_deg; int rand_sep; int32_t *end_ptr; }; extern int random_r (struct random_data *__restrict __buf, int32_t *__restrict __result) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))); extern int srandom_r (unsigned int __seed, struct random_data *__buf) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (2))); extern int initstate_r (unsigned int __seed, char *__restrict __statebuf, size_t __statelen, struct random_data *__restrict __buf) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (2, 4))); extern int setstate_r (char *__restrict __statebuf, struct random_data *__restrict __buf) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))); extern int rand (void) __attribute__ ((__nothrow__ , __leaf__)); extern void srand (unsigned int __seed) __attribute__ ((__nothrow__ , __leaf__)); extern int rand_r (unsigned int *__seed) __attribute__ ((__nothrow__ , __leaf__)); extern double drand48 (void) __attribute__ ((__nothrow__ , __leaf__)); extern double erand48 (unsigned short int __xsubi[3]) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern long int lrand48 (void) __attribute__ ((__nothrow__ , __leaf__)); extern long int nrand48 (unsigned short int __xsubi[3]) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern long int mrand48 (void) __attribute__ ((__nothrow__ , __leaf__)); extern long int jrand48 (unsigned short int __xsubi[3]) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern void srand48 (long int __seedval) __attribute__ ((__nothrow__ , __leaf__)); extern unsigned short int *seed48 (unsigned short int __seed16v[3]) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern void lcong48 (unsigned short int __param[7]) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); struct drand48_data { unsigned short int __x[3]; unsigned short int __old_x[3]; unsigned short int __c; unsigned short int __init; unsigned long long int __a; }; extern int drand48_r (struct drand48_data *__restrict __buffer, double *__restrict __result) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))); extern int erand48_r (unsigned short int __xsubi[3], struct drand48_data *__restrict __buffer, double *__restrict __result) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))); extern int lrand48_r (struct drand48_data *__restrict __buffer, long int *__restrict __result) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))); extern int nrand48_r (unsigned short int __xsubi[3], struct drand48_data *__restrict __buffer, long int *__restrict __result) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))); extern int mrand48_r (struct drand48_data *__restrict __buffer, long int *__restrict __result) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))); extern int jrand48_r (unsigned short int __xsubi[3], struct drand48_data *__restrict __buffer, long int *__restrict __result) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))); extern int srand48_r (long int __seedval, struct drand48_data *__buffer) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (2))); extern int seed48_r (unsigned short int __seed16v[3], struct drand48_data *__buffer) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))); extern int lcong48_r (unsigned short int __param[7], struct drand48_data *__buffer) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))); extern void *malloc (size_t __size) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__malloc__)) ; extern void *calloc (size_t __nmemb, size_t __size) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__malloc__)) ; extern void *realloc (void *__ptr, size_t __size) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__warn_unused_result__)); extern void free (void *__ptr) __attribute__ ((__nothrow__ , __leaf__)); extern void cfree (void *__ptr) __attribute__ ((__nothrow__ , __leaf__)); # 1 "/usr/include/alloca.h" 1 3 4 # 24 "/usr/include/alloca.h" 3 4 # 1 "/usr/lib/gcc/x86_64-linux-gnu/4.7/include/stddef.h" 1 3 4 # 25 "/usr/include/alloca.h" 2 3 4 extern void *alloca (size_t __size) __attribute__ ((__nothrow__ , __leaf__)); # 492 "/usr/include/stdlib.h" 2 3 4 extern void *valloc (size_t __size) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__malloc__)) ; extern int posix_memalign (void **__memptr, size_t __alignment, size_t __size) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))) ; # 512 "/usr/include/stdlib.h" 3 4 extern void abort (void) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__noreturn__)); extern int atexit (void (*__func) (void)) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); # 529 "/usr/include/stdlib.h" 3 4 extern int on_exit (void (*__func) (int __status, void *__arg), void *__arg) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern void exit (int __status) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__noreturn__)); extern void _Exit (int __status) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__noreturn__)); extern char *getenv (const char *__name) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))) ; # 577 "/usr/include/stdlib.h" 3 4 extern int putenv (char *__string) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern int setenv (const char *__name, const char *__value, int __replace) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (2))); extern int unsetenv (const char *__name) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern int clearenv (void) __attribute__ ((__nothrow__ , __leaf__)); # 605 "/usr/include/stdlib.h" 3 4 extern char *mktemp (char *__template) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); # 619 "/usr/include/stdlib.h" 3 4 extern int mkstemp (char *__template) __attribute__ ((__nonnull__ (1))) ; # 641 "/usr/include/stdlib.h" 3 4 extern int mkstemps (char *__template, int __suffixlen) __attribute__ ((__nonnull__ (1))) ; # 662 "/usr/include/stdlib.h" 3 4 extern char *mkdtemp (char *__template) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))) ; # 711 "/usr/include/stdlib.h" 3 4 extern int system (const char *__command) ; # 733 "/usr/include/stdlib.h" 3 4 extern char *realpath (const char *__restrict __name, char *__restrict __resolved) __attribute__ ((__nothrow__ , __leaf__)) ; typedef int (*__compar_fn_t) (const void *, const void *); # 751 "/usr/include/stdlib.h" 3 4 extern void *bsearch (const void *__key, const void *__base, size_t __nmemb, size_t __size, __compar_fn_t __compar) __attribute__ ((__nonnull__ (1, 2, 5))) ; extern void qsort (void *__base, size_t __nmemb, size_t __size, __compar_fn_t __compar) __attribute__ ((__nonnull__ (1, 4))); # 770 "/usr/include/stdlib.h" 3 4 extern int abs (int __x) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)) ; extern long int labs (long int __x) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)) ; __extension__ extern long long int llabs (long long int __x) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)) ; extern div_t div (int __numer, int __denom) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)) ; extern ldiv_t ldiv (long int __numer, long int __denom) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)) ; __extension__ extern lldiv_t lldiv (long long int __numer, long long int __denom) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)) ; # 807 "/usr/include/stdlib.h" 3 4 extern char *ecvt (double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (3, 4))) ; extern char *fcvt (double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (3, 4))) ; extern char *gcvt (double __value, int __ndigit, char *__buf) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (3))) ; extern char *qecvt (long double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (3, 4))) ; extern char *qfcvt (long double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (3, 4))) ; extern char *qgcvt (long double __value, int __ndigit, char *__buf) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (3))) ; extern int ecvt_r (double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign, char *__restrict __buf, size_t __len) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (3, 4, 5))); extern int fcvt_r (double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign, char *__restrict __buf, size_t __len) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (3, 4, 5))); extern int qecvt_r (long double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign, char *__restrict __buf, size_t __len) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (3, 4, 5))); extern int qfcvt_r (long double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign, char *__restrict __buf, size_t __len) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (3, 4, 5))); extern int mblen (const char *__s, size_t __n) __attribute__ ((__nothrow__ , __leaf__)) ; extern int mbtowc (wchar_t *__restrict __pwc, const char *__restrict __s, size_t __n) __attribute__ ((__nothrow__ , __leaf__)) ; extern int wctomb (char *__s, wchar_t __wchar) __attribute__ ((__nothrow__ , __leaf__)) ; extern size_t mbstowcs (wchar_t *__restrict __pwcs, const char *__restrict __s, size_t __n) __attribute__ ((__nothrow__ , __leaf__)); extern size_t wcstombs (char *__restrict __s, const wchar_t *__restrict __pwcs, size_t __n) __attribute__ ((__nothrow__ , __leaf__)); extern int rpmatch (const char *__response) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))) ; # 895 "/usr/include/stdlib.h" 3 4 extern int getsubopt (char **__restrict __optionp, char *const *__restrict __tokens, char **__restrict __valuep) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2, 3))) ; # 947 "/usr/include/stdlib.h" 3 4 extern int getloadavg (double __loadavg[], int __nelem) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); # 1 "/usr/include/x86_64-linux-gnu/bits/stdlib-float.h" 1 3 4 # 952 "/usr/include/stdlib.h" 2 3 4 # 964 "/usr/include/stdlib.h" 3 4 # 3 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 Defined "HAVE_STDLIB_H" to "1" ================================================================================ TEST check from config.headers(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: pthread.h sh: tau_cc.sh -E -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.headers /tmp/petsc-U9YCMv/config.headers/conftest.c Executing: tau_cc.sh -E -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.headers /tmp/petsc-U9YCMv/config.headers/conftest.c sh: # 1 "/tmp/petsc-U9YCMv/config.headers/conftest.c" # 1 "" # 1 "/tmp/petsc-U9YCMv/config.headers/conftest.c" # 1 "/tmp/petsc-U9YCMv/config.headers/confdefs.h" 1 # 2 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 # 1 "/tmp/petsc-U9YCMv/config.headers/conffix.h" 1 # 3 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 # 1 "/usr/include/pthread.h" 1 3 4 # 21 "/usr/include/pthread.h" 3 4 # 1 "/usr/include/features.h" 1 3 4 # 341 "/usr/include/features.h" 3 4 # 1 "/usr/include/stdc-predef.h" 1 3 4 # 30 "/usr/include/stdc-predef.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/predefs.h" 1 3 4 # 31 "/usr/include/stdc-predef.h" 2 3 4 # 342 "/usr/include/features.h" 2 3 4 # 371 "/usr/include/features.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/sys/cdefs.h" 1 3 4 # 385 "/usr/include/x86_64-linux-gnu/sys/cdefs.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/wordsize.h" 1 3 4 # 386 "/usr/include/x86_64-linux-gnu/sys/cdefs.h" 2 3 4 # 372 "/usr/include/features.h" 2 3 4 # 395 "/usr/include/features.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/gnu/stubs.h" 1 3 4 # 10 "/usr/include/x86_64-linux-gnu/gnu/stubs.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/gnu/stubs-64.h" 1 3 4 # 11 "/usr/include/x86_64-linux-gnu/gnu/stubs.h" 2 3 4 # 396 "/usr/include/features.h" 2 3 4 # 22 "/usr/include/pthread.h" 2 3 4 # 1 "/usr/include/endian.h" 1 3 4 # 36 "/usr/include/endian.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/endian.h" 1 3 4 # 37 "/usr/include/endian.h" 2 3 4 # 60 "/usr/include/endian.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/byteswap.h" 1 3 4 # 27 "/usr/include/x86_64-linux-gnu/bits/byteswap.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/types.h" 1 3 4 # 27 "/usr/include/x86_64-linux-gnu/bits/types.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/wordsize.h" 1 3 4 # 28 "/usr/include/x86_64-linux-gnu/bits/types.h" 2 3 4 typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; # 130 "/usr/include/x86_64-linux-gnu/bits/types.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/typesizes.h" 1 3 4 # 131 "/usr/include/x86_64-linux-gnu/bits/types.h" 2 3 4 typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned long int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef long int __suseconds_t; typedef int __daddr_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __fsword_t; typedef long int __ssize_t; typedef long int __syscall_slong_t; typedef unsigned long int __syscall_ulong_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; # 28 "/usr/include/x86_64-linux-gnu/bits/byteswap.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/wordsize.h" 1 3 4 # 29 "/usr/include/x86_64-linux-gnu/bits/byteswap.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/byteswap-16.h" 1 3 4 # 36 "/usr/include/x86_64-linux-gnu/bits/byteswap.h" 2 3 4 # 44 "/usr/include/x86_64-linux-gnu/bits/byteswap.h" 3 4 static __inline unsigned int __bswap_32 (unsigned int __bsx) { return __builtin_bswap32 (__bsx); } # 108 "/usr/include/x86_64-linux-gnu/bits/byteswap.h" 3 4 static __inline __uint64_t __bswap_64 (__uint64_t __bsx) { return __builtin_bswap64 (__bsx); } # 61 "/usr/include/endian.h" 2 3 4 # 23 "/usr/include/pthread.h" 2 3 4 # 1 "/usr/include/sched.h" 1 3 4 # 29 "/usr/include/sched.h" 3 4 # 1 "/usr/lib/gcc/x86_64-linux-gnu/4.7/include/stddef.h" 1 3 4 # 213 "/usr/lib/gcc/x86_64-linux-gnu/4.7/include/stddef.h" 3 4 typedef long unsigned int size_t; # 30 "/usr/include/sched.h" 2 3 4 # 1 "/usr/include/time.h" 1 3 4 # 73 "/usr/include/time.h" 3 4 typedef __time_t time_t; # 120 "/usr/include/time.h" 3 4 struct timespec { __time_t tv_sec; __syscall_slong_t tv_nsec; }; # 34 "/usr/include/sched.h" 2 3 4 typedef __pid_t pid_t; # 1 "/usr/include/x86_64-linux-gnu/bits/sched.h" 1 3 4 # 73 "/usr/include/x86_64-linux-gnu/bits/sched.h" 3 4 struct sched_param { int __sched_priority; }; # 96 "/usr/include/x86_64-linux-gnu/bits/sched.h" 3 4 struct __sched_param { int __sched_priority; }; # 119 "/usr/include/x86_64-linux-gnu/bits/sched.h" 3 4 typedef unsigned long int __cpu_mask; typedef struct { __cpu_mask __bits[1024 / (8 * sizeof (__cpu_mask))]; } cpu_set_t; # 202 "/usr/include/x86_64-linux-gnu/bits/sched.h" 3 4 extern int __sched_cpucount (size_t __setsize, const cpu_set_t *__setp) __attribute__ ((__nothrow__ , __leaf__)); extern cpu_set_t *__sched_cpualloc (size_t __count) __attribute__ ((__nothrow__ , __leaf__)) ; extern void __sched_cpufree (cpu_set_t *__set) __attribute__ ((__nothrow__ , __leaf__)); # 43 "/usr/include/sched.h" 2 3 4 extern int sched_setparam (__pid_t __pid, const struct sched_param *__param) __attribute__ ((__nothrow__ , __leaf__)); extern int sched_getparam (__pid_t __pid, struct sched_param *__param) __attribute__ ((__nothrow__ , __leaf__)); extern int sched_setscheduler (__pid_t __pid, int __policy, const struct sched_param *__param) __attribute__ ((__nothrow__ , __leaf__)); extern int sched_getscheduler (__pid_t __pid) __attribute__ ((__nothrow__ , __leaf__)); extern int sched_yield (void) __attribute__ ((__nothrow__ , __leaf__)); extern int sched_get_priority_max (int __algorithm) __attribute__ ((__nothrow__ , __leaf__)); extern int sched_get_priority_min (int __algorithm) __attribute__ ((__nothrow__ , __leaf__)); extern int sched_rr_get_interval (__pid_t __pid, struct timespec *__t) __attribute__ ((__nothrow__ , __leaf__)); # 125 "/usr/include/sched.h" 3 4 # 24 "/usr/include/pthread.h" 2 3 4 # 1 "/usr/include/time.h" 1 3 4 # 29 "/usr/include/time.h" 3 4 # 1 "/usr/lib/gcc/x86_64-linux-gnu/4.7/include/stddef.h" 1 3 4 # 38 "/usr/include/time.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/time.h" 1 3 4 # 42 "/usr/include/time.h" 2 3 4 # 57 "/usr/include/time.h" 3 4 typedef __clock_t clock_t; # 91 "/usr/include/time.h" 3 4 typedef __clockid_t clockid_t; # 103 "/usr/include/time.h" 3 4 typedef __timer_t timer_t; # 131 "/usr/include/time.h" 3 4 struct tm { int tm_sec; int tm_min; int tm_hour; int tm_mday; int tm_mon; int tm_year; int tm_wday; int tm_yday; int tm_isdst; long int tm_gmtoff; const char *tm_zone; }; struct itimerspec { struct timespec it_interval; struct timespec it_value; }; struct sigevent; # 186 "/usr/include/time.h" 3 4 extern clock_t clock (void) __attribute__ ((__nothrow__ , __leaf__)); extern time_t time (time_t *__timer) __attribute__ ((__nothrow__ , __leaf__)); extern double difftime (time_t __time1, time_t __time0) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); extern time_t mktime (struct tm *__tp) __attribute__ ((__nothrow__ , __leaf__)); extern size_t strftime (char *__restrict __s, size_t __maxsize, const char *__restrict __format, const struct tm *__restrict __tp) __attribute__ ((__nothrow__ , __leaf__)); # 221 "/usr/include/time.h" 3 4 # 1 "/usr/include/xlocale.h" 1 3 4 # 27 "/usr/include/xlocale.h" 3 4 typedef struct __locale_struct { struct __locale_data *__locales[13]; const unsigned short int *__ctype_b; const int *__ctype_tolower; const int *__ctype_toupper; const char *__names[13]; } *__locale_t; typedef __locale_t locale_t; # 222 "/usr/include/time.h" 2 3 4 extern size_t strftime_l (char *__restrict __s, size_t __maxsize, const char *__restrict __format, const struct tm *__restrict __tp, __locale_t __loc) __attribute__ ((__nothrow__ , __leaf__)); # 236 "/usr/include/time.h" 3 4 extern struct tm *gmtime (const time_t *__timer) __attribute__ ((__nothrow__ , __leaf__)); extern struct tm *localtime (const time_t *__timer) __attribute__ ((__nothrow__ , __leaf__)); extern struct tm *gmtime_r (const time_t *__restrict __timer, struct tm *__restrict __tp) __attribute__ ((__nothrow__ , __leaf__)); extern struct tm *localtime_r (const time_t *__restrict __timer, struct tm *__restrict __tp) __attribute__ ((__nothrow__ , __leaf__)); extern char *asctime (const struct tm *__tp) __attribute__ ((__nothrow__ , __leaf__)); extern char *ctime (const time_t *__timer) __attribute__ ((__nothrow__ , __leaf__)); extern char *asctime_r (const struct tm *__restrict __tp, char *__restrict __buf) __attribute__ ((__nothrow__ , __leaf__)); extern char *ctime_r (const time_t *__restrict __timer, char *__restrict __buf) __attribute__ ((__nothrow__ , __leaf__)); extern char *__tzname[2]; extern int __daylight; extern long int __timezone; extern char *tzname[2]; extern void tzset (void) __attribute__ ((__nothrow__ , __leaf__)); extern int daylight; extern long int timezone; extern int stime (const time_t *__when) __attribute__ ((__nothrow__ , __leaf__)); # 319 "/usr/include/time.h" 3 4 extern time_t timegm (struct tm *__tp) __attribute__ ((__nothrow__ , __leaf__)); extern time_t timelocal (struct tm *__tp) __attribute__ ((__nothrow__ , __leaf__)); extern int dysize (int __year) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); # 334 "/usr/include/time.h" 3 4 extern int nanosleep (const struct timespec *__requested_time, struct timespec *__remaining); extern int clock_getres (clockid_t __clock_id, struct timespec *__res) __attribute__ ((__nothrow__ , __leaf__)); extern int clock_gettime (clockid_t __clock_id, struct timespec *__tp) __attribute__ ((__nothrow__ , __leaf__)); extern int clock_settime (clockid_t __clock_id, const struct timespec *__tp) __attribute__ ((__nothrow__ , __leaf__)); extern int clock_nanosleep (clockid_t __clock_id, int __flags, const struct timespec *__req, struct timespec *__rem); extern int clock_getcpuclockid (pid_t __pid, clockid_t *__clock_id) __attribute__ ((__nothrow__ , __leaf__)); extern int timer_create (clockid_t __clock_id, struct sigevent *__restrict __evp, timer_t *__restrict __timerid) __attribute__ ((__nothrow__ , __leaf__)); extern int timer_delete (timer_t __timerid) __attribute__ ((__nothrow__ , __leaf__)); extern int timer_settime (timer_t __timerid, int __flags, const struct itimerspec *__restrict __value, struct itimerspec *__restrict __ovalue) __attribute__ ((__nothrow__ , __leaf__)); extern int timer_gettime (timer_t __timerid, struct itimerspec *__value) __attribute__ ((__nothrow__ , __leaf__)); extern int timer_getoverrun (timer_t __timerid) __attribute__ ((__nothrow__ , __leaf__)); # 430 "/usr/include/time.h" 3 4 # 25 "/usr/include/pthread.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/pthreadtypes.h" 1 3 4 # 21 "/usr/include/x86_64-linux-gnu/bits/pthreadtypes.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/wordsize.h" 1 3 4 # 22 "/usr/include/x86_64-linux-gnu/bits/pthreadtypes.h" 2 3 4 # 60 "/usr/include/x86_64-linux-gnu/bits/pthreadtypes.h" 3 4 typedef unsigned long int pthread_t; union pthread_attr_t { char __size[56]; long int __align; }; typedef union pthread_attr_t pthread_attr_t; typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; # 90 "/usr/include/x86_64-linux-gnu/bits/pthreadtypes.h" 3 4 typedef union { struct __pthread_mutex_s { int __lock; unsigned int __count; int __owner; unsigned int __nusers; int __kind; int __spins; __pthread_list_t __list; # 115 "/usr/include/x86_64-linux-gnu/bits/pthreadtypes.h" 3 4 } __data; char __size[40]; long int __align; } pthread_mutex_t; typedef union { char __size[4]; int __align; } pthread_mutexattr_t; typedef union { struct { int __lock; unsigned int __futex; __extension__ unsigned long long int __total_seq; __extension__ unsigned long long int __wakeup_seq; __extension__ unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; __extension__ long long int __align; } pthread_cond_t; typedef union { char __size[4]; int __align; } pthread_condattr_t; typedef unsigned int pthread_key_t; typedef int pthread_once_t; typedef union { struct { int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; unsigned int __flags; } __data; # 202 "/usr/include/x86_64-linux-gnu/bits/pthreadtypes.h" 3 4 char __size[56]; long int __align; } pthread_rwlock_t; typedef union { char __size[8]; long int __align; } pthread_rwlockattr_t; typedef volatile int pthread_spinlock_t; typedef union { char __size[32]; long int __align; } pthread_barrier_t; typedef union { char __size[4]; int __align; } pthread_barrierattr_t; # 27 "/usr/include/pthread.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/setjmp.h" 1 3 4 # 26 "/usr/include/x86_64-linux-gnu/bits/setjmp.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/wordsize.h" 1 3 4 # 27 "/usr/include/x86_64-linux-gnu/bits/setjmp.h" 2 3 4 typedef long int __jmp_buf[8]; # 28 "/usr/include/pthread.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/wordsize.h" 1 3 4 # 29 "/usr/include/pthread.h" 2 3 4 enum { PTHREAD_CREATE_JOINABLE, PTHREAD_CREATE_DETACHED }; enum { PTHREAD_MUTEX_TIMED_NP, PTHREAD_MUTEX_RECURSIVE_NP, PTHREAD_MUTEX_ERRORCHECK_NP, PTHREAD_MUTEX_ADAPTIVE_NP , PTHREAD_MUTEX_NORMAL = PTHREAD_MUTEX_TIMED_NP, PTHREAD_MUTEX_RECURSIVE = PTHREAD_MUTEX_RECURSIVE_NP, PTHREAD_MUTEX_ERRORCHECK = PTHREAD_MUTEX_ERRORCHECK_NP, PTHREAD_MUTEX_DEFAULT = PTHREAD_MUTEX_NORMAL }; enum { PTHREAD_MUTEX_STALLED, PTHREAD_MUTEX_STALLED_NP = PTHREAD_MUTEX_STALLED, PTHREAD_MUTEX_ROBUST, PTHREAD_MUTEX_ROBUST_NP = PTHREAD_MUTEX_ROBUST }; enum { PTHREAD_PRIO_NONE, PTHREAD_PRIO_INHERIT, PTHREAD_PRIO_PROTECT }; # 113 "/usr/include/pthread.h" 3 4 enum { PTHREAD_RWLOCK_PREFER_READER_NP, PTHREAD_RWLOCK_PREFER_WRITER_NP, PTHREAD_RWLOCK_PREFER_WRITER_NONRECURSIVE_NP, PTHREAD_RWLOCK_DEFAULT_NP = PTHREAD_RWLOCK_PREFER_READER_NP }; # 154 "/usr/include/pthread.h" 3 4 enum { PTHREAD_INHERIT_SCHED, PTHREAD_EXPLICIT_SCHED }; enum { PTHREAD_SCOPE_SYSTEM, PTHREAD_SCOPE_PROCESS }; enum { PTHREAD_PROCESS_PRIVATE, PTHREAD_PROCESS_SHARED }; # 189 "/usr/include/pthread.h" 3 4 struct _pthread_cleanup_buffer { void (*__routine) (void *); void *__arg; int __canceltype; struct _pthread_cleanup_buffer *__prev; }; enum { PTHREAD_CANCEL_ENABLE, PTHREAD_CANCEL_DISABLE }; enum { PTHREAD_CANCEL_DEFERRED, PTHREAD_CANCEL_ASYNCHRONOUS }; # 227 "/usr/include/pthread.h" 3 4 extern int pthread_create (pthread_t *__restrict __newthread, const pthread_attr_t *__restrict __attr, void *(*__start_routine) (void *), void *__restrict __arg) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 3))); extern void pthread_exit (void *__retval) __attribute__ ((__noreturn__)); extern int pthread_join (pthread_t __th, void **__thread_return); # 270 "/usr/include/pthread.h" 3 4 extern int pthread_detach (pthread_t __th) __attribute__ ((__nothrow__ , __leaf__)); extern pthread_t pthread_self (void) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); extern int pthread_equal (pthread_t __thread1, pthread_t __thread2) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); extern int pthread_attr_init (pthread_attr_t *__attr) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern int pthread_attr_destroy (pthread_attr_t *__attr) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern int pthread_attr_getdetachstate (const pthread_attr_t *__attr, int *__detachstate) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))); extern int pthread_attr_setdetachstate (pthread_attr_t *__attr, int __detachstate) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern int pthread_attr_getguardsize (const pthread_attr_t *__attr, size_t *__guardsize) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))); extern int pthread_attr_setguardsize (pthread_attr_t *__attr, size_t __guardsize) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern int pthread_attr_getschedparam (const pthread_attr_t *__restrict __attr, struct sched_param *__restrict __param) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))); extern int pthread_attr_setschedparam (pthread_attr_t *__restrict __attr, const struct sched_param *__restrict __param) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))); extern int pthread_attr_getschedpolicy (const pthread_attr_t *__restrict __attr, int *__restrict __policy) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))); extern int pthread_attr_setschedpolicy (pthread_attr_t *__attr, int __policy) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern int pthread_attr_getinheritsched (const pthread_attr_t *__restrict __attr, int *__restrict __inherit) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))); extern int pthread_attr_setinheritsched (pthread_attr_t *__attr, int __inherit) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern int pthread_attr_getscope (const pthread_attr_t *__restrict __attr, int *__restrict __scope) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))); extern int pthread_attr_setscope (pthread_attr_t *__attr, int __scope) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern int pthread_attr_getstackaddr (const pthread_attr_t *__restrict __attr, void **__restrict __stackaddr) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))) __attribute__ ((__deprecated__)); extern int pthread_attr_setstackaddr (pthread_attr_t *__attr, void *__stackaddr) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))) __attribute__ ((__deprecated__)); extern int pthread_attr_getstacksize (const pthread_attr_t *__restrict __attr, size_t *__restrict __stacksize) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))); extern int pthread_attr_setstacksize (pthread_attr_t *__attr, size_t __stacksize) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern int pthread_attr_getstack (const pthread_attr_t *__restrict __attr, void **__restrict __stackaddr, size_t *__restrict __stacksize) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2, 3))); extern int pthread_attr_setstack (pthread_attr_t *__attr, void *__stackaddr, size_t __stacksize) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); # 420 "/usr/include/pthread.h" 3 4 extern int pthread_setschedparam (pthread_t __target_thread, int __policy, const struct sched_param *__param) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (3))); extern int pthread_getschedparam (pthread_t __target_thread, int *__restrict __policy, struct sched_param *__restrict __param) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (2, 3))); extern int pthread_setschedprio (pthread_t __target_thread, int __prio) __attribute__ ((__nothrow__ , __leaf__)); # 485 "/usr/include/pthread.h" 3 4 extern int pthread_once (pthread_once_t *__once_control, void (*__init_routine) (void)) __attribute__ ((__nonnull__ (1, 2))); # 497 "/usr/include/pthread.h" 3 4 extern int pthread_setcancelstate (int __state, int *__oldstate); extern int pthread_setcanceltype (int __type, int *__oldtype); extern int pthread_cancel (pthread_t __th); extern void pthread_testcancel (void); typedef struct { struct { __jmp_buf __cancel_jmp_buf; int __mask_was_saved; } __cancel_jmp_buf[1]; void *__pad[4]; } __pthread_unwind_buf_t __attribute__ ((__aligned__)); # 531 "/usr/include/pthread.h" 3 4 struct __pthread_cleanup_frame { void (*__cancel_routine) (void *); void *__cancel_arg; int __do_it; int __cancel_type; }; # 671 "/usr/include/pthread.h" 3 4 extern void __pthread_register_cancel (__pthread_unwind_buf_t *__buf) ; # 683 "/usr/include/pthread.h" 3 4 extern void __pthread_unregister_cancel (__pthread_unwind_buf_t *__buf) ; # 724 "/usr/include/pthread.h" 3 4 extern void __pthread_unwind_next (__pthread_unwind_buf_t *__buf) __attribute__ ((__noreturn__)) __attribute__ ((__weak__)) ; struct __jmp_buf_tag; extern int __sigsetjmp (struct __jmp_buf_tag *__env, int __savemask) __attribute__ ((__nothrow__)); extern int pthread_mutex_init (pthread_mutex_t *__mutex, const pthread_mutexattr_t *__mutexattr) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern int pthread_mutex_destroy (pthread_mutex_t *__mutex) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern int pthread_mutex_trylock (pthread_mutex_t *__mutex) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_mutex_lock (pthread_mutex_t *__mutex) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_mutex_timedlock (pthread_mutex_t *__restrict __mutex, const struct timespec *__restrict __abstime) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int pthread_mutex_unlock (pthread_mutex_t *__mutex) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_mutex_getprioceiling (const pthread_mutex_t * __restrict __mutex, int *__restrict __prioceiling) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))); extern int pthread_mutex_setprioceiling (pthread_mutex_t *__restrict __mutex, int __prioceiling, int *__restrict __old_ceiling) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 3))); extern int pthread_mutex_consistent (pthread_mutex_t *__mutex) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); # 797 "/usr/include/pthread.h" 3 4 extern int pthread_mutexattr_init (pthread_mutexattr_t *__attr) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern int pthread_mutexattr_destroy (pthread_mutexattr_t *__attr) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern int pthread_mutexattr_getpshared (const pthread_mutexattr_t * __restrict __attr, int *__restrict __pshared) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))); extern int pthread_mutexattr_setpshared (pthread_mutexattr_t *__attr, int __pshared) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern int pthread_mutexattr_gettype (const pthread_mutexattr_t *__restrict __attr, int *__restrict __kind) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))); extern int pthread_mutexattr_settype (pthread_mutexattr_t *__attr, int __kind) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern int pthread_mutexattr_getprotocol (const pthread_mutexattr_t * __restrict __attr, int *__restrict __protocol) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))); extern int pthread_mutexattr_setprotocol (pthread_mutexattr_t *__attr, int __protocol) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern int pthread_mutexattr_getprioceiling (const pthread_mutexattr_t * __restrict __attr, int *__restrict __prioceiling) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))); extern int pthread_mutexattr_setprioceiling (pthread_mutexattr_t *__attr, int __prioceiling) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern int pthread_mutexattr_getrobust (const pthread_mutexattr_t *__attr, int *__robustness) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))); extern int pthread_mutexattr_setrobust (pthread_mutexattr_t *__attr, int __robustness) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); # 879 "/usr/include/pthread.h" 3 4 extern int pthread_rwlock_init (pthread_rwlock_t *__restrict __rwlock, const pthread_rwlockattr_t *__restrict __attr) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern int pthread_rwlock_destroy (pthread_rwlock_t *__rwlock) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern int pthread_rwlock_rdlock (pthread_rwlock_t *__rwlock) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_rwlock_tryrdlock (pthread_rwlock_t *__rwlock) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_rwlock_timedrdlock (pthread_rwlock_t *__restrict __rwlock, const struct timespec *__restrict __abstime) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int pthread_rwlock_wrlock (pthread_rwlock_t *__rwlock) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_rwlock_trywrlock (pthread_rwlock_t *__rwlock) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_rwlock_timedwrlock (pthread_rwlock_t *__restrict __rwlock, const struct timespec *__restrict __abstime) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int pthread_rwlock_unlock (pthread_rwlock_t *__rwlock) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_rwlockattr_init (pthread_rwlockattr_t *__attr) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern int pthread_rwlockattr_destroy (pthread_rwlockattr_t *__attr) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern int pthread_rwlockattr_getpshared (const pthread_rwlockattr_t * __restrict __attr, int *__restrict __pshared) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))); extern int pthread_rwlockattr_setpshared (pthread_rwlockattr_t *__attr, int __pshared) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern int pthread_rwlockattr_getkind_np (const pthread_rwlockattr_t * __restrict __attr, int *__restrict __pref) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))); extern int pthread_rwlockattr_setkind_np (pthread_rwlockattr_t *__attr, int __pref) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern int pthread_cond_init (pthread_cond_t *__restrict __cond, const pthread_condattr_t *__restrict __cond_attr) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern int pthread_cond_destroy (pthread_cond_t *__cond) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern int pthread_cond_signal (pthread_cond_t *__cond) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_cond_broadcast (pthread_cond_t *__cond) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_cond_wait (pthread_cond_t *__restrict __cond, pthread_mutex_t *__restrict __mutex) __attribute__ ((__nonnull__ (1, 2))); # 991 "/usr/include/pthread.h" 3 4 extern int pthread_cond_timedwait (pthread_cond_t *__restrict __cond, pthread_mutex_t *__restrict __mutex, const struct timespec *__restrict __abstime) __attribute__ ((__nonnull__ (1, 2, 3))); extern int pthread_condattr_init (pthread_condattr_t *__attr) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern int pthread_condattr_destroy (pthread_condattr_t *__attr) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern int pthread_condattr_getpshared (const pthread_condattr_t * __restrict __attr, int *__restrict __pshared) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))); extern int pthread_condattr_setpshared (pthread_condattr_t *__attr, int __pshared) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern int pthread_condattr_getclock (const pthread_condattr_t * __restrict __attr, __clockid_t *__restrict __clock_id) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))); extern int pthread_condattr_setclock (pthread_condattr_t *__attr, __clockid_t __clock_id) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); # 1035 "/usr/include/pthread.h" 3 4 extern int pthread_spin_init (pthread_spinlock_t *__lock, int __pshared) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern int pthread_spin_destroy (pthread_spinlock_t *__lock) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern int pthread_spin_lock (pthread_spinlock_t *__lock) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_spin_trylock (pthread_spinlock_t *__lock) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_spin_unlock (pthread_spinlock_t *__lock) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_barrier_init (pthread_barrier_t *__restrict __barrier, const pthread_barrierattr_t *__restrict __attr, unsigned int __count) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern int pthread_barrier_destroy (pthread_barrier_t *__barrier) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern int pthread_barrier_wait (pthread_barrier_t *__barrier) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_barrierattr_init (pthread_barrierattr_t *__attr) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern int pthread_barrierattr_destroy (pthread_barrierattr_t *__attr) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern int pthread_barrierattr_getpshared (const pthread_barrierattr_t * __restrict __attr, int *__restrict __pshared) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))); extern int pthread_barrierattr_setpshared (pthread_barrierattr_t *__attr, int __pshared) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); # 1102 "/usr/include/pthread.h" 3 4 extern int pthread_key_create (pthread_key_t *__key, void (*__destr_function) (void *)) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern int pthread_key_delete (pthread_key_t __key) __attribute__ ((__nothrow__ , __leaf__)); extern void *pthread_getspecific (pthread_key_t __key) __attribute__ ((__nothrow__ , __leaf__)); extern int pthread_setspecific (pthread_key_t __key, const void *__pointer) __attribute__ ((__nothrow__ , __leaf__)) ; extern int pthread_getcpuclockid (pthread_t __thread_id, __clockid_t *__clock_id) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (2))); # 1136 "/usr/include/pthread.h" 3 4 extern int pthread_atfork (void (*__prepare) (void), void (*__parent) (void), void (*__child) (void)) __attribute__ ((__nothrow__ , __leaf__)); # 1150 "/usr/include/pthread.h" 3 4 # 3 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 Defined "HAVE_PTHREAD_H" to "1" ================================================================================ TEST check from config.headers(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: setjmp.h sh: tau_cc.sh -E -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.headers /tmp/petsc-U9YCMv/config.headers/conftest.c Executing: tau_cc.sh -E -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.headers /tmp/petsc-U9YCMv/config.headers/conftest.c sh: # 1 "/tmp/petsc-U9YCMv/config.headers/conftest.c" # 1 "" # 1 "/tmp/petsc-U9YCMv/config.headers/conftest.c" # 1 "/tmp/petsc-U9YCMv/config.headers/confdefs.h" 1 # 2 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 # 1 "/tmp/petsc-U9YCMv/config.headers/conffix.h" 1 # 3 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 # 1 "/usr/include/setjmp.h" 1 3 4 # 25 "/usr/include/setjmp.h" 3 4 # 1 "/usr/include/features.h" 1 3 4 # 341 "/usr/include/features.h" 3 4 # 1 "/usr/include/stdc-predef.h" 1 3 4 # 30 "/usr/include/stdc-predef.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/predefs.h" 1 3 4 # 31 "/usr/include/stdc-predef.h" 2 3 4 # 342 "/usr/include/features.h" 2 3 4 # 371 "/usr/include/features.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/sys/cdefs.h" 1 3 4 # 385 "/usr/include/x86_64-linux-gnu/sys/cdefs.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/wordsize.h" 1 3 4 # 386 "/usr/include/x86_64-linux-gnu/sys/cdefs.h" 2 3 4 # 372 "/usr/include/features.h" 2 3 4 # 395 "/usr/include/features.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/gnu/stubs.h" 1 3 4 # 10 "/usr/include/x86_64-linux-gnu/gnu/stubs.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/gnu/stubs-64.h" 1 3 4 # 11 "/usr/include/x86_64-linux-gnu/gnu/stubs.h" 2 3 4 # 396 "/usr/include/features.h" 2 3 4 # 26 "/usr/include/setjmp.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/setjmp.h" 1 3 4 # 26 "/usr/include/x86_64-linux-gnu/bits/setjmp.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/wordsize.h" 1 3 4 # 27 "/usr/include/x86_64-linux-gnu/bits/setjmp.h" 2 3 4 typedef long int __jmp_buf[8]; # 30 "/usr/include/setjmp.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/sigset.h" 1 3 4 # 23 "/usr/include/x86_64-linux-gnu/bits/sigset.h" 3 4 typedef int __sig_atomic_t; typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; # 31 "/usr/include/setjmp.h" 2 3 4 struct __jmp_buf_tag { __jmp_buf __jmpbuf; int __mask_was_saved; __sigset_t __saved_mask; }; typedef struct __jmp_buf_tag jmp_buf[1]; extern int setjmp (jmp_buf __env) __attribute__ ((__nothrow__)); extern int __sigsetjmp (struct __jmp_buf_tag __env[1], int __savemask) __attribute__ ((__nothrow__)); extern int _setjmp (struct __jmp_buf_tag __env[1]) __attribute__ ((__nothrow__)); # 77 "/usr/include/setjmp.h" 3 4 extern void longjmp (struct __jmp_buf_tag __env[1], int __val) __attribute__ ((__nothrow__)) __attribute__ ((__noreturn__)); extern void _longjmp (struct __jmp_buf_tag __env[1], int __val) __attribute__ ((__nothrow__)) __attribute__ ((__noreturn__)); typedef struct __jmp_buf_tag sigjmp_buf[1]; # 109 "/usr/include/setjmp.h" 3 4 extern void siglongjmp (sigjmp_buf __env, int __val) __attribute__ ((__nothrow__)) __attribute__ ((__noreturn__)); # 119 "/usr/include/setjmp.h" 3 4 # 3 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 Defined "HAVE_SETJMP_H" to "1" ================================================================================ TEST check from config.headers(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/utsname.h sh: tau_cc.sh -E -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.headers /tmp/petsc-U9YCMv/config.headers/conftest.c Executing: tau_cc.sh -E -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.headers /tmp/petsc-U9YCMv/config.headers/conftest.c sh: # 1 "/tmp/petsc-U9YCMv/config.headers/conftest.c" # 1 "" # 1 "/tmp/petsc-U9YCMv/config.headers/conftest.c" # 1 "/tmp/petsc-U9YCMv/config.headers/confdefs.h" 1 # 2 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 # 1 "/tmp/petsc-U9YCMv/config.headers/conffix.h" 1 # 3 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 # 1 "/usr/include/x86_64-linux-gnu/sys/utsname.h" 1 3 4 # 25 "/usr/include/x86_64-linux-gnu/sys/utsname.h" 3 4 # 1 "/usr/include/features.h" 1 3 4 # 341 "/usr/include/features.h" 3 4 # 1 "/usr/include/stdc-predef.h" 1 3 4 # 30 "/usr/include/stdc-predef.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/predefs.h" 1 3 4 # 31 "/usr/include/stdc-predef.h" 2 3 4 # 342 "/usr/include/features.h" 2 3 4 # 371 "/usr/include/features.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/sys/cdefs.h" 1 3 4 # 385 "/usr/include/x86_64-linux-gnu/sys/cdefs.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/wordsize.h" 1 3 4 # 386 "/usr/include/x86_64-linux-gnu/sys/cdefs.h" 2 3 4 # 372 "/usr/include/features.h" 2 3 4 # 395 "/usr/include/features.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/gnu/stubs.h" 1 3 4 # 10 "/usr/include/x86_64-linux-gnu/gnu/stubs.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/gnu/stubs-64.h" 1 3 4 # 11 "/usr/include/x86_64-linux-gnu/gnu/stubs.h" 2 3 4 # 396 "/usr/include/features.h" 2 3 4 # 26 "/usr/include/x86_64-linux-gnu/sys/utsname.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/utsname.h" 1 3 4 # 30 "/usr/include/x86_64-linux-gnu/sys/utsname.h" 2 3 4 # 48 "/usr/include/x86_64-linux-gnu/sys/utsname.h" 3 4 struct utsname { char sysname[65]; char nodename[65]; char release[65]; char version[65]; char machine[65]; char __domainname[65]; }; # 81 "/usr/include/x86_64-linux-gnu/sys/utsname.h" 3 4 extern int uname (struct utsname *__name) __attribute__ ((__nothrow__ , __leaf__)); # 3 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 Defined "HAVE_SYS_UTSNAME_H" to "1" ================================================================================ TEST check from config.headers(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: machine/endian.h sh: tau_cc.sh -E -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.headers /tmp/petsc-U9YCMv/config.headers/conftest.c Executing: tau_cc.sh -E -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.headers /tmp/petsc-U9YCMv/config.headers/conftest.c sh: # 1 "/tmp/petsc-U9YCMv/config.headers/conftest.c" # 1 "" # 1 "/tmp/petsc-U9YCMv/config.headers/conftest.c" # 1 "/tmp/petsc-U9YCMv/config.headers/confdefs.h" 1 # 2 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 # 1 "/tmp/petsc-U9YCMv/config.headers/conffix.h" 1 # 3 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 Possible ERROR while running preprocessor: /tmp/petsc-U9YCMv/config.headers/conftest.c:3:28: fatal error: machine/endian.h: No such file or directory compilation terminated. make: *** [all] Error 1 ret = 256 error message = {/tmp/petsc-U9YCMv/config.headers/conftest.c:3:28: fatal error: machine/endian.h: No such file or directory compilation terminated. make: *** [all] Error 1 } Source: #include "confdefs.h" #include "conffix.h" #include ================================================================================ TEST check from config.headers(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: limits.h sh: tau_cc.sh -E -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.headers /tmp/petsc-U9YCMv/config.headers/conftest.c Executing: tau_cc.sh -E -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.headers /tmp/petsc-U9YCMv/config.headers/conftest.c sh: # 1 "/tmp/petsc-U9YCMv/config.headers/conftest.c" # 1 "" # 1 "/tmp/petsc-U9YCMv/config.headers/conftest.c" # 1 "/tmp/petsc-U9YCMv/config.headers/confdefs.h" 1 # 2 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 # 1 "/tmp/petsc-U9YCMv/config.headers/conffix.h" 1 # 3 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 # 1 "/usr/lib/gcc/x86_64-linux-gnu/4.7/include-fixed/limits.h" 1 3 4 # 34 "/usr/lib/gcc/x86_64-linux-gnu/4.7/include-fixed/limits.h" 3 4 # 1 "/usr/lib/gcc/x86_64-linux-gnu/4.7/include-fixed/syslimits.h" 1 3 4 # 1 "/usr/lib/gcc/x86_64-linux-gnu/4.7/include-fixed/limits.h" 1 3 4 # 169 "/usr/lib/gcc/x86_64-linux-gnu/4.7/include-fixed/limits.h" 3 4 # 1 "/usr/include/limits.h" 1 3 4 # 26 "/usr/include/limits.h" 3 4 # 1 "/usr/include/features.h" 1 3 4 # 341 "/usr/include/features.h" 3 4 # 1 "/usr/include/stdc-predef.h" 1 3 4 # 30 "/usr/include/stdc-predef.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/predefs.h" 1 3 4 # 31 "/usr/include/stdc-predef.h" 2 3 4 # 342 "/usr/include/features.h" 2 3 4 # 371 "/usr/include/features.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/sys/cdefs.h" 1 3 4 # 385 "/usr/include/x86_64-linux-gnu/sys/cdefs.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/wordsize.h" 1 3 4 # 386 "/usr/include/x86_64-linux-gnu/sys/cdefs.h" 2 3 4 # 372 "/usr/include/features.h" 2 3 4 # 395 "/usr/include/features.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/gnu/stubs.h" 1 3 4 # 10 "/usr/include/x86_64-linux-gnu/gnu/stubs.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/gnu/stubs-64.h" 1 3 4 # 11 "/usr/include/x86_64-linux-gnu/gnu/stubs.h" 2 3 4 # 396 "/usr/include/features.h" 2 3 4 # 27 "/usr/include/limits.h" 2 3 4 # 144 "/usr/include/limits.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/posix1_lim.h" 1 3 4 # 160 "/usr/include/x86_64-linux-gnu/bits/posix1_lim.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/local_lim.h" 1 3 4 # 38 "/usr/include/x86_64-linux-gnu/bits/local_lim.h" 3 4 # 1 "/usr/include/linux/limits.h" 1 3 4 # 39 "/usr/include/x86_64-linux-gnu/bits/local_lim.h" 2 3 4 # 161 "/usr/include/x86_64-linux-gnu/bits/posix1_lim.h" 2 3 4 # 145 "/usr/include/limits.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/posix2_lim.h" 1 3 4 # 149 "/usr/include/limits.h" 2 3 4 # 170 "/usr/lib/gcc/x86_64-linux-gnu/4.7/include-fixed/limits.h" 2 3 4 # 8 "/usr/lib/gcc/x86_64-linux-gnu/4.7/include-fixed/syslimits.h" 2 3 4 # 35 "/usr/lib/gcc/x86_64-linux-gnu/4.7/include-fixed/limits.h" 2 3 4 # 3 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 Defined "HAVE_LIMITS_H" to "1" ================================================================================ TEST check from config.headers(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: fcntl.h sh: tau_cc.sh -E -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.headers /tmp/petsc-U9YCMv/config.headers/conftest.c Executing: tau_cc.sh -E -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.headers /tmp/petsc-U9YCMv/config.headers/conftest.c sh: # 1 "/tmp/petsc-U9YCMv/config.headers/conftest.c" # 1 "" # 1 "/tmp/petsc-U9YCMv/config.headers/conftest.c" # 1 "/tmp/petsc-U9YCMv/config.headers/confdefs.h" 1 # 2 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 # 1 "/tmp/petsc-U9YCMv/config.headers/conffix.h" 1 # 3 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 # 1 "/usr/include/fcntl.h" 1 3 4 # 25 "/usr/include/fcntl.h" 3 4 # 1 "/usr/include/features.h" 1 3 4 # 341 "/usr/include/features.h" 3 4 # 1 "/usr/include/stdc-predef.h" 1 3 4 # 30 "/usr/include/stdc-predef.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/predefs.h" 1 3 4 # 31 "/usr/include/stdc-predef.h" 2 3 4 # 342 "/usr/include/features.h" 2 3 4 # 371 "/usr/include/features.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/sys/cdefs.h" 1 3 4 # 385 "/usr/include/x86_64-linux-gnu/sys/cdefs.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/wordsize.h" 1 3 4 # 386 "/usr/include/x86_64-linux-gnu/sys/cdefs.h" 2 3 4 # 372 "/usr/include/features.h" 2 3 4 # 395 "/usr/include/features.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/gnu/stubs.h" 1 3 4 # 10 "/usr/include/x86_64-linux-gnu/gnu/stubs.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/gnu/stubs-64.h" 1 3 4 # 11 "/usr/include/x86_64-linux-gnu/gnu/stubs.h" 2 3 4 # 396 "/usr/include/features.h" 2 3 4 # 26 "/usr/include/fcntl.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/types.h" 1 3 4 # 27 "/usr/include/x86_64-linux-gnu/bits/types.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/wordsize.h" 1 3 4 # 28 "/usr/include/x86_64-linux-gnu/bits/types.h" 2 3 4 typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; # 130 "/usr/include/x86_64-linux-gnu/bits/types.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/typesizes.h" 1 3 4 # 131 "/usr/include/x86_64-linux-gnu/bits/types.h" 2 3 4 typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned long int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef long int __suseconds_t; typedef int __daddr_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __fsword_t; typedef long int __ssize_t; typedef long int __syscall_slong_t; typedef unsigned long int __syscall_ulong_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; # 32 "/usr/include/fcntl.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/fcntl.h" 1 3 4 # 35 "/usr/include/x86_64-linux-gnu/bits/fcntl.h" 3 4 struct flock { short int l_type; short int l_whence; __off_t l_start; __off_t l_len; __pid_t l_pid; }; # 61 "/usr/include/x86_64-linux-gnu/bits/fcntl.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/fcntl-linux.h" 1 3 4 # 330 "/usr/include/x86_64-linux-gnu/bits/fcntl-linux.h" 3 4 # 404 "/usr/include/x86_64-linux-gnu/bits/fcntl-linux.h" 3 4 # 61 "/usr/include/x86_64-linux-gnu/bits/fcntl.h" 2 3 4 # 36 "/usr/include/fcntl.h" 2 3 4 typedef __mode_t mode_t; typedef __off_t off_t; # 60 "/usr/include/fcntl.h" 3 4 typedef __pid_t pid_t; # 1 "/usr/include/time.h" 1 3 4 # 120 "/usr/include/time.h" 3 4 struct timespec { __time_t tv_sec; __syscall_slong_t tv_nsec; }; # 68 "/usr/include/fcntl.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/stat.h" 1 3 4 # 46 "/usr/include/x86_64-linux-gnu/bits/stat.h" 3 4 struct stat { __dev_t st_dev; __ino_t st_ino; __nlink_t st_nlink; __mode_t st_mode; __uid_t st_uid; __gid_t st_gid; int __pad0; __dev_t st_rdev; __off_t st_size; __blksize_t st_blksize; __blkcnt_t st_blocks; # 91 "/usr/include/x86_64-linux-gnu/bits/stat.h" 3 4 struct timespec st_atim; struct timespec st_mtim; struct timespec st_ctim; # 106 "/usr/include/x86_64-linux-gnu/bits/stat.h" 3 4 __syscall_slong_t __unused[3]; # 115 "/usr/include/x86_64-linux-gnu/bits/stat.h" 3 4 }; # 69 "/usr/include/fcntl.h" 2 3 4 # 137 "/usr/include/fcntl.h" 3 4 extern int fcntl (int __fd, int __cmd, ...); # 146 "/usr/include/fcntl.h" 3 4 extern int open (const char *__file, int __oflag, ...) __attribute__ ((__nonnull__ (1))); # 170 "/usr/include/fcntl.h" 3 4 extern int openat (int __fd, const char *__file, int __oflag, ...) __attribute__ ((__nonnull__ (2))); # 192 "/usr/include/fcntl.h" 3 4 extern int creat (const char *__file, mode_t __mode) __attribute__ ((__nonnull__ (1))); # 221 "/usr/include/fcntl.h" 3 4 extern int lockf (int __fd, int __cmd, off_t __len); # 238 "/usr/include/fcntl.h" 3 4 extern int posix_fadvise (int __fd, off_t __offset, off_t __len, int __advise) __attribute__ ((__nothrow__ , __leaf__)); # 260 "/usr/include/fcntl.h" 3 4 extern int posix_fallocate (int __fd, off_t __offset, off_t __len); # 282 "/usr/include/fcntl.h" 3 4 # 3 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 Defined "HAVE_FCNTL_H" to "1" ================================================================================ TEST check from config.headers(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: fenv.h sh: tau_cc.sh -E -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.headers /tmp/petsc-U9YCMv/config.headers/conftest.c Executing: tau_cc.sh -E -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.headers /tmp/petsc-U9YCMv/config.headers/conftest.c sh: # 1 "/tmp/petsc-U9YCMv/config.headers/conftest.c" # 1 "" # 1 "/tmp/petsc-U9YCMv/config.headers/conftest.c" # 1 "/tmp/petsc-U9YCMv/config.headers/confdefs.h" 1 # 2 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 # 1 "/tmp/petsc-U9YCMv/config.headers/conffix.h" 1 # 3 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 # 1 "/usr/include/fenv.h" 1 3 4 # 25 "/usr/include/fenv.h" 3 4 # 1 "/usr/include/features.h" 1 3 4 # 341 "/usr/include/features.h" 3 4 # 1 "/usr/include/stdc-predef.h" 1 3 4 # 30 "/usr/include/stdc-predef.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/predefs.h" 1 3 4 # 31 "/usr/include/stdc-predef.h" 2 3 4 # 342 "/usr/include/features.h" 2 3 4 # 371 "/usr/include/features.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/sys/cdefs.h" 1 3 4 # 385 "/usr/include/x86_64-linux-gnu/sys/cdefs.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/wordsize.h" 1 3 4 # 386 "/usr/include/x86_64-linux-gnu/sys/cdefs.h" 2 3 4 # 372 "/usr/include/features.h" 2 3 4 # 395 "/usr/include/features.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/gnu/stubs.h" 1 3 4 # 10 "/usr/include/x86_64-linux-gnu/gnu/stubs.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/gnu/stubs-64.h" 1 3 4 # 11 "/usr/include/x86_64-linux-gnu/gnu/stubs.h" 2 3 4 # 396 "/usr/include/features.h" 2 3 4 # 26 "/usr/include/fenv.h" 2 3 4 # 57 "/usr/include/fenv.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/fenv.h" 1 3 4 # 24 "/usr/include/x86_64-linux-gnu/bits/fenv.h" 3 4 enum { FE_INVALID = 0x01, __FE_DENORM = 0x02, FE_DIVBYZERO = 0x04, FE_OVERFLOW = 0x08, FE_UNDERFLOW = 0x10, FE_INEXACT = 0x20 }; enum { FE_TONEAREST = 0, FE_DOWNWARD = 0x400, FE_UPWARD = 0x800, FE_TOWARDZERO = 0xc00 }; typedef unsigned short int fexcept_t; typedef struct { unsigned short int __control_word; unsigned short int __unused1; unsigned short int __status_word; unsigned short int __unused2; unsigned short int __tags; unsigned short int __unused3; unsigned int __eip; unsigned short int __cs_selector; unsigned int __opcode:11; unsigned int __unused4:5; unsigned int __data_offset; unsigned short int __data_selector; unsigned short int __unused5; unsigned int __mxcsr; } fenv_t; # 58 "/usr/include/fenv.h" 2 3 4 extern int feclearexcept (int __excepts) __attribute__ ((__nothrow__ , __leaf__)); extern int fegetexceptflag (fexcept_t *__flagp, int __excepts) __attribute__ ((__nothrow__ , __leaf__)); extern int feraiseexcept (int __excepts) __attribute__ ((__nothrow__ , __leaf__)); extern int fesetexceptflag (const fexcept_t *__flagp, int __excepts) __attribute__ ((__nothrow__ , __leaf__)); extern int fetestexcept (int __excepts) __attribute__ ((__nothrow__ , __leaf__)); extern int fegetround (void) __attribute__ ((__nothrow__ , __leaf__)); extern int fesetround (int __rounding_direction) __attribute__ ((__nothrow__ , __leaf__)); extern int fegetenv (fenv_t *__envp) __attribute__ ((__nothrow__ , __leaf__)); extern int feholdexcept (fenv_t *__envp) __attribute__ ((__nothrow__ , __leaf__)); extern int fesetenv (const fenv_t *__envp) __attribute__ ((__nothrow__ , __leaf__)); extern int feupdateenv (const fenv_t *__envp) __attribute__ ((__nothrow__ , __leaf__)); # 133 "/usr/include/fenv.h" 3 4 # 3 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 Defined "HAVE_FENV_H" to "1" ================================================================================ TEST check from config.headers(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: string.h sh: tau_cc.sh -E -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.headers /tmp/petsc-U9YCMv/config.headers/conftest.c Executing: tau_cc.sh -E -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.headers /tmp/petsc-U9YCMv/config.headers/conftest.c sh: # 1 "/tmp/petsc-U9YCMv/config.headers/conftest.c" # 1 "" # 1 "/tmp/petsc-U9YCMv/config.headers/conftest.c" # 1 "/tmp/petsc-U9YCMv/config.headers/confdefs.h" 1 # 2 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 # 1 "/tmp/petsc-U9YCMv/config.headers/conffix.h" 1 # 3 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 # 1 "/usr/include/string.h" 1 3 4 # 25 "/usr/include/string.h" 3 4 # 1 "/usr/include/features.h" 1 3 4 # 341 "/usr/include/features.h" 3 4 # 1 "/usr/include/stdc-predef.h" 1 3 4 # 30 "/usr/include/stdc-predef.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/predefs.h" 1 3 4 # 31 "/usr/include/stdc-predef.h" 2 3 4 # 342 "/usr/include/features.h" 2 3 4 # 371 "/usr/include/features.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/sys/cdefs.h" 1 3 4 # 385 "/usr/include/x86_64-linux-gnu/sys/cdefs.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/wordsize.h" 1 3 4 # 386 "/usr/include/x86_64-linux-gnu/sys/cdefs.h" 2 3 4 # 372 "/usr/include/features.h" 2 3 4 # 395 "/usr/include/features.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/gnu/stubs.h" 1 3 4 # 10 "/usr/include/x86_64-linux-gnu/gnu/stubs.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/gnu/stubs-64.h" 1 3 4 # 11 "/usr/include/x86_64-linux-gnu/gnu/stubs.h" 2 3 4 # 396 "/usr/include/features.h" 2 3 4 # 26 "/usr/include/string.h" 2 3 4 # 1 "/usr/lib/gcc/x86_64-linux-gnu/4.7/include/stddef.h" 1 3 4 # 213 "/usr/lib/gcc/x86_64-linux-gnu/4.7/include/stddef.h" 3 4 typedef long unsigned int size_t; # 33 "/usr/include/string.h" 2 3 4 extern void *memcpy (void *__restrict __dest, const void *__restrict __src, size_t __n) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))); extern void *memmove (void *__dest, const void *__src, size_t __n) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))); extern void *memccpy (void *__restrict __dest, const void *__restrict __src, int __c, size_t __n) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))); extern void *memset (void *__s, int __c, size_t __n) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern int memcmp (const void *__s1, const void *__s2, size_t __n) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1, 2))); # 92 "/usr/include/string.h" 3 4 extern void *memchr (const void *__s, int __c, size_t __n) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1))); # 123 "/usr/include/string.h" 3 4 extern char *strcpy (char *__restrict __dest, const char *__restrict __src) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))); extern char *strncpy (char *__restrict __dest, const char *__restrict __src, size_t __n) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))); extern char *strcat (char *__restrict __dest, const char *__restrict __src) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))); extern char *strncat (char *__restrict __dest, const char *__restrict __src, size_t __n) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))); extern int strcmp (const char *__s1, const char *__s2) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1, 2))); extern int strncmp (const char *__s1, const char *__s2, size_t __n) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1, 2))); extern int strcoll (const char *__s1, const char *__s2) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1, 2))); extern size_t strxfrm (char *__restrict __dest, const char *__restrict __src, size_t __n) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (2))); # 1 "/usr/include/xlocale.h" 1 3 4 # 27 "/usr/include/xlocale.h" 3 4 typedef struct __locale_struct { struct __locale_data *__locales[13]; const unsigned short int *__ctype_b; const int *__ctype_tolower; const int *__ctype_toupper; const char *__names[13]; } *__locale_t; typedef __locale_t locale_t; # 160 "/usr/include/string.h" 2 3 4 extern int strcoll_l (const char *__s1, const char *__s2, __locale_t __l) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1, 2, 3))); extern size_t strxfrm_l (char *__dest, const char *__src, size_t __n, __locale_t __l) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (2, 4))); extern char *strdup (const char *__s) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__malloc__)) __attribute__ ((__nonnull__ (1))); extern char *strndup (const char *__string, size_t __n) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__malloc__)) __attribute__ ((__nonnull__ (1))); # 207 "/usr/include/string.h" 3 4 # 232 "/usr/include/string.h" 3 4 extern char *strchr (const char *__s, int __c) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1))); # 259 "/usr/include/string.h" 3 4 extern char *strrchr (const char *__s, int __c) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1))); # 278 "/usr/include/string.h" 3 4 extern size_t strcspn (const char *__s, const char *__reject) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1, 2))); extern size_t strspn (const char *__s, const char *__accept) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1, 2))); # 311 "/usr/include/string.h" 3 4 extern char *strpbrk (const char *__s, const char *__accept) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1, 2))); # 338 "/usr/include/string.h" 3 4 extern char *strstr (const char *__haystack, const char *__needle) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1, 2))); extern char *strtok (char *__restrict __s, const char *__restrict __delim) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (2))); extern char *__strtok_r (char *__restrict __s, const char *__restrict __delim, char **__restrict __save_ptr) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (2, 3))); extern char *strtok_r (char *__restrict __s, const char *__restrict __delim, char **__restrict __save_ptr) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (2, 3))); # 393 "/usr/include/string.h" 3 4 extern size_t strlen (const char *__s) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1))); extern size_t strnlen (const char *__string, size_t __maxlen) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1))); extern char *strerror (int __errnum) __attribute__ ((__nothrow__ , __leaf__)); # 423 "/usr/include/string.h" 3 4 extern int strerror_r (int __errnum, char *__buf, size_t __buflen) __asm__ ("" "__xpg_strerror_r") __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (2))); # 441 "/usr/include/string.h" 3 4 extern char *strerror_l (int __errnum, __locale_t __l) __attribute__ ((__nothrow__ , __leaf__)); extern void __bzero (void *__s, size_t __n) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern void bcopy (const void *__src, void *__dest, size_t __n) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))); extern void bzero (void *__s, size_t __n) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern int bcmp (const void *__s1, const void *__s2, size_t __n) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1, 2))); # 485 "/usr/include/string.h" 3 4 extern char *index (const char *__s, int __c) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1))); # 513 "/usr/include/string.h" 3 4 extern char *rindex (const char *__s, int __c) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1))); extern int ffs (int __i) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); # 532 "/usr/include/string.h" 3 4 extern int strcasecmp (const char *__s1, const char *__s2) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1, 2))); extern int strncasecmp (const char *__s1, const char *__s2, size_t __n) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1, 2))); # 555 "/usr/include/string.h" 3 4 extern char *strsep (char **__restrict __stringp, const char *__restrict __delim) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))); extern char *strsignal (int __sig) __attribute__ ((__nothrow__ , __leaf__)); extern char *__stpcpy (char *__restrict __dest, const char *__restrict __src) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))); extern char *stpcpy (char *__restrict __dest, const char *__restrict __src) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))); extern char *__stpncpy (char *__restrict __dest, const char *__restrict __src, size_t __n) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))); extern char *stpncpy (char *__restrict __dest, const char *__restrict __src, size_t __n) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))); # 642 "/usr/include/string.h" 3 4 # 3 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 Defined "HAVE_STRING_H" to "1" ================================================================================ TEST check from config.headers(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: memory.h sh: tau_cc.sh -E -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.headers /tmp/petsc-U9YCMv/config.headers/conftest.c Executing: tau_cc.sh -E -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.headers /tmp/petsc-U9YCMv/config.headers/conftest.c sh: # 1 "/tmp/petsc-U9YCMv/config.headers/conftest.c" # 1 "" # 1 "/tmp/petsc-U9YCMv/config.headers/conftest.c" # 1 "/tmp/petsc-U9YCMv/config.headers/confdefs.h" 1 # 2 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 # 1 "/tmp/petsc-U9YCMv/config.headers/conffix.h" 1 # 3 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 # 1 "/usr/include/memory.h" 1 3 4 # 25 "/usr/include/memory.h" 3 4 # 1 "/usr/include/features.h" 1 3 4 # 341 "/usr/include/features.h" 3 4 # 1 "/usr/include/stdc-predef.h" 1 3 4 # 30 "/usr/include/stdc-predef.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/predefs.h" 1 3 4 # 31 "/usr/include/stdc-predef.h" 2 3 4 # 342 "/usr/include/features.h" 2 3 4 # 371 "/usr/include/features.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/sys/cdefs.h" 1 3 4 # 385 "/usr/include/x86_64-linux-gnu/sys/cdefs.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/wordsize.h" 1 3 4 # 386 "/usr/include/x86_64-linux-gnu/sys/cdefs.h" 2 3 4 # 372 "/usr/include/features.h" 2 3 4 # 395 "/usr/include/features.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/gnu/stubs.h" 1 3 4 # 10 "/usr/include/x86_64-linux-gnu/gnu/stubs.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/gnu/stubs-64.h" 1 3 4 # 11 "/usr/include/x86_64-linux-gnu/gnu/stubs.h" 2 3 4 # 396 "/usr/include/features.h" 2 3 4 # 26 "/usr/include/memory.h" 2 3 4 # 1 "/usr/include/string.h" 1 3 4 # 27 "/usr/include/string.h" 3 4 # 1 "/usr/lib/gcc/x86_64-linux-gnu/4.7/include/stddef.h" 1 3 4 # 213 "/usr/lib/gcc/x86_64-linux-gnu/4.7/include/stddef.h" 3 4 typedef long unsigned int size_t; # 33 "/usr/include/string.h" 2 3 4 extern void *memcpy (void *__restrict __dest, const void *__restrict __src, size_t __n) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))); extern void *memmove (void *__dest, const void *__src, size_t __n) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))); extern void *memccpy (void *__restrict __dest, const void *__restrict __src, int __c, size_t __n) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))); extern void *memset (void *__s, int __c, size_t __n) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern int memcmp (const void *__s1, const void *__s2, size_t __n) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1, 2))); # 92 "/usr/include/string.h" 3 4 extern void *memchr (const void *__s, int __c, size_t __n) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1))); # 123 "/usr/include/string.h" 3 4 extern char *strcpy (char *__restrict __dest, const char *__restrict __src) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))); extern char *strncpy (char *__restrict __dest, const char *__restrict __src, size_t __n) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))); extern char *strcat (char *__restrict __dest, const char *__restrict __src) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))); extern char *strncat (char *__restrict __dest, const char *__restrict __src, size_t __n) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))); extern int strcmp (const char *__s1, const char *__s2) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1, 2))); extern int strncmp (const char *__s1, const char *__s2, size_t __n) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1, 2))); extern int strcoll (const char *__s1, const char *__s2) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1, 2))); extern size_t strxfrm (char *__restrict __dest, const char *__restrict __src, size_t __n) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (2))); # 1 "/usr/include/xlocale.h" 1 3 4 # 27 "/usr/include/xlocale.h" 3 4 typedef struct __locale_struct { struct __locale_data *__locales[13]; const unsigned short int *__ctype_b; const int *__ctype_tolower; const int *__ctype_toupper; const char *__names[13]; } *__locale_t; typedef __locale_t locale_t; # 160 "/usr/include/string.h" 2 3 4 extern int strcoll_l (const char *__s1, const char *__s2, __locale_t __l) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1, 2, 3))); extern size_t strxfrm_l (char *__dest, const char *__src, size_t __n, __locale_t __l) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (2, 4))); extern char *strdup (const char *__s) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__malloc__)) __attribute__ ((__nonnull__ (1))); extern char *strndup (const char *__string, size_t __n) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__malloc__)) __attribute__ ((__nonnull__ (1))); # 207 "/usr/include/string.h" 3 4 # 232 "/usr/include/string.h" 3 4 extern char *strchr (const char *__s, int __c) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1))); # 259 "/usr/include/string.h" 3 4 extern char *strrchr (const char *__s, int __c) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1))); # 278 "/usr/include/string.h" 3 4 extern size_t strcspn (const char *__s, const char *__reject) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1, 2))); extern size_t strspn (const char *__s, const char *__accept) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1, 2))); # 311 "/usr/include/string.h" 3 4 extern char *strpbrk (const char *__s, const char *__accept) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1, 2))); # 338 "/usr/include/string.h" 3 4 extern char *strstr (const char *__haystack, const char *__needle) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1, 2))); extern char *strtok (char *__restrict __s, const char *__restrict __delim) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (2))); extern char *__strtok_r (char *__restrict __s, const char *__restrict __delim, char **__restrict __save_ptr) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (2, 3))); extern char *strtok_r (char *__restrict __s, const char *__restrict __delim, char **__restrict __save_ptr) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (2, 3))); # 393 "/usr/include/string.h" 3 4 extern size_t strlen (const char *__s) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1))); extern size_t strnlen (const char *__string, size_t __maxlen) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1))); extern char *strerror (int __errnum) __attribute__ ((__nothrow__ , __leaf__)); # 423 "/usr/include/string.h" 3 4 extern int strerror_r (int __errnum, char *__buf, size_t __buflen) __asm__ ("" "__xpg_strerror_r") __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (2))); # 441 "/usr/include/string.h" 3 4 extern char *strerror_l (int __errnum, __locale_t __l) __attribute__ ((__nothrow__ , __leaf__)); extern void __bzero (void *__s, size_t __n) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern void bcopy (const void *__src, void *__dest, size_t __n) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))); extern void bzero (void *__s, size_t __n) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern int bcmp (const void *__s1, const void *__s2, size_t __n) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1, 2))); # 485 "/usr/include/string.h" 3 4 extern char *index (const char *__s, int __c) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1))); # 513 "/usr/include/string.h" 3 4 extern char *rindex (const char *__s, int __c) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1))); extern int ffs (int __i) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); # 532 "/usr/include/string.h" 3 4 extern int strcasecmp (const char *__s1, const char *__s2) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1, 2))); extern int strncasecmp (const char *__s1, const char *__s2, size_t __n) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1, 2))); # 555 "/usr/include/string.h" 3 4 extern char *strsep (char **__restrict __stringp, const char *__restrict __delim) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))); extern char *strsignal (int __sig) __attribute__ ((__nothrow__ , __leaf__)); extern char *__stpcpy (char *__restrict __dest, const char *__restrict __src) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))); extern char *stpcpy (char *__restrict __dest, const char *__restrict __src) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))); extern char *__stpncpy (char *__restrict __dest, const char *__restrict __src, size_t __n) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))); extern char *stpncpy (char *__restrict __dest, const char *__restrict __src, size_t __n) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))); # 642 "/usr/include/string.h" 3 4 # 30 "/usr/include/memory.h" 2 3 4 # 3 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 Defined "HAVE_MEMORY_H" to "1" ================================================================================ TEST check from config.headers(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/times.h sh: tau_cc.sh -E -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.headers /tmp/petsc-U9YCMv/config.headers/conftest.c Executing: tau_cc.sh -E -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.headers /tmp/petsc-U9YCMv/config.headers/conftest.c sh: # 1 "/tmp/petsc-U9YCMv/config.headers/conftest.c" # 1 "" # 1 "/tmp/petsc-U9YCMv/config.headers/conftest.c" # 1 "/tmp/petsc-U9YCMv/config.headers/confdefs.h" 1 # 2 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 # 1 "/tmp/petsc-U9YCMv/config.headers/conffix.h" 1 # 3 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 # 1 "/usr/include/x86_64-linux-gnu/sys/times.h" 1 3 4 # 25 "/usr/include/x86_64-linux-gnu/sys/times.h" 3 4 # 1 "/usr/include/features.h" 1 3 4 # 341 "/usr/include/features.h" 3 4 # 1 "/usr/include/stdc-predef.h" 1 3 4 # 30 "/usr/include/stdc-predef.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/predefs.h" 1 3 4 # 31 "/usr/include/stdc-predef.h" 2 3 4 # 342 "/usr/include/features.h" 2 3 4 # 371 "/usr/include/features.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/sys/cdefs.h" 1 3 4 # 385 "/usr/include/x86_64-linux-gnu/sys/cdefs.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/wordsize.h" 1 3 4 # 386 "/usr/include/x86_64-linux-gnu/sys/cdefs.h" 2 3 4 # 372 "/usr/include/features.h" 2 3 4 # 395 "/usr/include/features.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/gnu/stubs.h" 1 3 4 # 10 "/usr/include/x86_64-linux-gnu/gnu/stubs.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/gnu/stubs-64.h" 1 3 4 # 11 "/usr/include/x86_64-linux-gnu/gnu/stubs.h" 2 3 4 # 396 "/usr/include/features.h" 2 3 4 # 26 "/usr/include/x86_64-linux-gnu/sys/times.h" 2 3 4 # 1 "/usr/include/time.h" 1 3 4 # 55 "/usr/include/time.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/types.h" 1 3 4 # 27 "/usr/include/x86_64-linux-gnu/bits/types.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/wordsize.h" 1 3 4 # 28 "/usr/include/x86_64-linux-gnu/bits/types.h" 2 3 4 typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; # 130 "/usr/include/x86_64-linux-gnu/bits/types.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/typesizes.h" 1 3 4 # 131 "/usr/include/x86_64-linux-gnu/bits/types.h" 2 3 4 typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned long int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef long int __suseconds_t; typedef int __daddr_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __fsword_t; typedef long int __ssize_t; typedef long int __syscall_slong_t; typedef unsigned long int __syscall_ulong_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; # 56 "/usr/include/time.h" 2 3 4 typedef __clock_t clock_t; # 29 "/usr/include/x86_64-linux-gnu/sys/times.h" 2 3 4 struct tms { clock_t tms_utime; clock_t tms_stime; clock_t tms_cutime; clock_t tms_cstime; }; extern clock_t times (struct tms *__buffer) __attribute__ ((__nothrow__ , __leaf__)); # 3 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 Defined "HAVE_SYS_TIMES_H" to "1" ================================================================================ TEST check from config.headers(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: io.h sh: tau_cc.sh -E -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.headers /tmp/petsc-U9YCMv/config.headers/conftest.c Executing: tau_cc.sh -E -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.headers /tmp/petsc-U9YCMv/config.headers/conftest.c sh: # 1 "/tmp/petsc-U9YCMv/config.headers/conftest.c" # 1 "" # 1 "/tmp/petsc-U9YCMv/config.headers/conftest.c" # 1 "/tmp/petsc-U9YCMv/config.headers/confdefs.h" 1 # 2 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 # 1 "/tmp/petsc-U9YCMv/config.headers/conffix.h" 1 # 3 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 Possible ERROR while running preprocessor: /tmp/petsc-U9YCMv/config.headers/conftest.c:3:16: fatal error: io.h: No such file or directory compilation terminated. make: *** [all] Error 1 ret = 256 error message = {/tmp/petsc-U9YCMv/config.headers/conftest.c:3:16: fatal error: io.h: No such file or directory compilation terminated. make: *** [all] Error 1 } Source: #include "confdefs.h" #include "conffix.h" #include ================================================================================ TEST check from config.headers(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: stdint.h sh: tau_cc.sh -E -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.headers /tmp/petsc-U9YCMv/config.headers/conftest.c Executing: tau_cc.sh -E -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.headers /tmp/petsc-U9YCMv/config.headers/conftest.c sh: # 1 "/tmp/petsc-U9YCMv/config.headers/conftest.c" # 1 "" # 1 "/tmp/petsc-U9YCMv/config.headers/conftest.c" # 1 "/tmp/petsc-U9YCMv/config.headers/confdefs.h" 1 # 2 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 # 1 "/tmp/petsc-U9YCMv/config.headers/conffix.h" 1 # 3 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 # 1 "/usr/lib/gcc/x86_64-linux-gnu/4.7/include/stdint.h" 1 3 4 # 1 "/usr/include/stdint.h" 1 3 4 # 25 "/usr/include/stdint.h" 3 4 # 1 "/usr/include/features.h" 1 3 4 # 341 "/usr/include/features.h" 3 4 # 1 "/usr/include/stdc-predef.h" 1 3 4 # 30 "/usr/include/stdc-predef.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/predefs.h" 1 3 4 # 31 "/usr/include/stdc-predef.h" 2 3 4 # 342 "/usr/include/features.h" 2 3 4 # 371 "/usr/include/features.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/sys/cdefs.h" 1 3 4 # 385 "/usr/include/x86_64-linux-gnu/sys/cdefs.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/wordsize.h" 1 3 4 # 386 "/usr/include/x86_64-linux-gnu/sys/cdefs.h" 2 3 4 # 372 "/usr/include/features.h" 2 3 4 # 395 "/usr/include/features.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/gnu/stubs.h" 1 3 4 # 10 "/usr/include/x86_64-linux-gnu/gnu/stubs.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/gnu/stubs-64.h" 1 3 4 # 11 "/usr/include/x86_64-linux-gnu/gnu/stubs.h" 2 3 4 # 396 "/usr/include/features.h" 2 3 4 # 26 "/usr/include/stdint.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/wchar.h" 1 3 4 # 27 "/usr/include/stdint.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/wordsize.h" 1 3 4 # 28 "/usr/include/stdint.h" 2 3 4 # 36 "/usr/include/stdint.h" 3 4 typedef signed char int8_t; typedef short int int16_t; typedef int int32_t; typedef long int int64_t; typedef unsigned char uint8_t; typedef unsigned short int uint16_t; typedef unsigned int uint32_t; typedef unsigned long int uint64_t; # 65 "/usr/include/stdint.h" 3 4 typedef signed char int_least8_t; typedef short int int_least16_t; typedef int int_least32_t; typedef long int int_least64_t; typedef unsigned char uint_least8_t; typedef unsigned short int uint_least16_t; typedef unsigned int uint_least32_t; typedef unsigned long int uint_least64_t; # 90 "/usr/include/stdint.h" 3 4 typedef signed char int_fast8_t; typedef long int int_fast16_t; typedef long int int_fast32_t; typedef long int int_fast64_t; # 103 "/usr/include/stdint.h" 3 4 typedef unsigned char uint_fast8_t; typedef unsigned long int uint_fast16_t; typedef unsigned long int uint_fast32_t; typedef unsigned long int uint_fast64_t; # 119 "/usr/include/stdint.h" 3 4 typedef long int intptr_t; typedef unsigned long int uintptr_t; # 134 "/usr/include/stdint.h" 3 4 typedef long int intmax_t; typedef unsigned long int uintmax_t; # 4 "/usr/lib/gcc/x86_64-linux-gnu/4.7/include/stdint.h" 2 3 4 # 3 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 Defined "HAVE_STDINT_H" to "1" ================================================================================ TEST check from config.headers(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: pwd.h sh: tau_cc.sh -E -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.headers /tmp/petsc-U9YCMv/config.headers/conftest.c Executing: tau_cc.sh -E -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.headers /tmp/petsc-U9YCMv/config.headers/conftest.c sh: # 1 "/tmp/petsc-U9YCMv/config.headers/conftest.c" # 1 "" # 1 "/tmp/petsc-U9YCMv/config.headers/conftest.c" # 1 "/tmp/petsc-U9YCMv/config.headers/confdefs.h" 1 # 2 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 # 1 "/tmp/petsc-U9YCMv/config.headers/conffix.h" 1 # 3 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 # 1 "/usr/include/pwd.h" 1 3 4 # 26 "/usr/include/pwd.h" 3 4 # 1 "/usr/include/features.h" 1 3 4 # 341 "/usr/include/features.h" 3 4 # 1 "/usr/include/stdc-predef.h" 1 3 4 # 30 "/usr/include/stdc-predef.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/predefs.h" 1 3 4 # 31 "/usr/include/stdc-predef.h" 2 3 4 # 342 "/usr/include/features.h" 2 3 4 # 371 "/usr/include/features.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/sys/cdefs.h" 1 3 4 # 385 "/usr/include/x86_64-linux-gnu/sys/cdefs.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/wordsize.h" 1 3 4 # 386 "/usr/include/x86_64-linux-gnu/sys/cdefs.h" 2 3 4 # 372 "/usr/include/features.h" 2 3 4 # 395 "/usr/include/features.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/gnu/stubs.h" 1 3 4 # 10 "/usr/include/x86_64-linux-gnu/gnu/stubs.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/gnu/stubs-64.h" 1 3 4 # 11 "/usr/include/x86_64-linux-gnu/gnu/stubs.h" 2 3 4 # 396 "/usr/include/features.h" 2 3 4 # 27 "/usr/include/pwd.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/types.h" 1 3 4 # 27 "/usr/include/x86_64-linux-gnu/bits/types.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/wordsize.h" 1 3 4 # 28 "/usr/include/x86_64-linux-gnu/bits/types.h" 2 3 4 typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; # 130 "/usr/include/x86_64-linux-gnu/bits/types.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/typesizes.h" 1 3 4 # 131 "/usr/include/x86_64-linux-gnu/bits/types.h" 2 3 4 typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned long int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef long int __suseconds_t; typedef int __daddr_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __fsword_t; typedef long int __ssize_t; typedef long int __syscall_slong_t; typedef unsigned long int __syscall_ulong_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; # 31 "/usr/include/pwd.h" 2 3 4 # 1 "/usr/lib/gcc/x86_64-linux-gnu/4.7/include/stddef.h" 1 3 4 # 213 "/usr/lib/gcc/x86_64-linux-gnu/4.7/include/stddef.h" 3 4 typedef long unsigned int size_t; # 34 "/usr/include/pwd.h" 2 3 4 typedef __gid_t gid_t; typedef __uid_t uid_t; struct passwd { char *pw_name; char *pw_passwd; __uid_t pw_uid; __gid_t pw_gid; char *pw_gecos; char *pw_dir; char *pw_shell; }; # 1 "/usr/include/stdio.h" 1 3 4 # 44 "/usr/include/stdio.h" 3 4 struct _IO_FILE; typedef struct _IO_FILE FILE; # 65 "/usr/include/pwd.h" 2 3 4 # 73 "/usr/include/pwd.h" 3 4 extern void setpwent (void); extern void endpwent (void); extern struct passwd *getpwent (void); # 95 "/usr/include/pwd.h" 3 4 extern struct passwd *fgetpwent (FILE *__stream); extern int putpwent (const struct passwd *__restrict __p, FILE *__restrict __f); extern struct passwd *getpwuid (__uid_t __uid); extern struct passwd *getpwnam (const char *__name); # 140 "/usr/include/pwd.h" 3 4 extern int getpwent_r (struct passwd *__restrict __resultbuf, char *__restrict __buffer, size_t __buflen, struct passwd **__restrict __result); extern int getpwuid_r (__uid_t __uid, struct passwd *__restrict __resultbuf, char *__restrict __buffer, size_t __buflen, struct passwd **__restrict __result); extern int getpwnam_r (const char *__restrict __name, struct passwd *__restrict __resultbuf, char *__restrict __buffer, size_t __buflen, struct passwd **__restrict __result); # 164 "/usr/include/pwd.h" 3 4 extern int fgetpwent_r (FILE *__restrict __stream, struct passwd *__restrict __resultbuf, char *__restrict __buffer, size_t __buflen, struct passwd **__restrict __result); # 184 "/usr/include/pwd.h" 3 4 # 3 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 Defined "HAVE_PWD_H" to "1" ================================================================================ TEST check from config.headers(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: float.h sh: tau_cc.sh -E -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.headers /tmp/petsc-U9YCMv/config.headers/conftest.c Executing: tau_cc.sh -E -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.headers /tmp/petsc-U9YCMv/config.headers/conftest.c sh: # 1 "/tmp/petsc-U9YCMv/config.headers/conftest.c" # 1 "" # 1 "/tmp/petsc-U9YCMv/config.headers/conftest.c" # 1 "/tmp/petsc-U9YCMv/config.headers/confdefs.h" 1 # 2 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 # 1 "/tmp/petsc-U9YCMv/config.headers/conffix.h" 1 # 3 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 # 1 "/usr/lib/gcc/x86_64-linux-gnu/4.7/include/float.h" 1 3 4 # 3 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 Defined "HAVE_FLOAT_H" to "1" ================================================================================ TEST check from config.headers(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/param.h sh: tau_cc.sh -E -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.headers /tmp/petsc-U9YCMv/config.headers/conftest.c Executing: tau_cc.sh -E -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.headers /tmp/petsc-U9YCMv/config.headers/conftest.c sh: # 1 "/tmp/petsc-U9YCMv/config.headers/conftest.c" # 1 "" # 1 "/tmp/petsc-U9YCMv/config.headers/conftest.c" # 1 "/tmp/petsc-U9YCMv/config.headers/confdefs.h" 1 # 2 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 # 1 "/tmp/petsc-U9YCMv/config.headers/conffix.h" 1 # 3 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 # 1 "/usr/include/x86_64-linux-gnu/sys/param.h" 1 3 4 # 23 "/usr/include/x86_64-linux-gnu/sys/param.h" 3 4 # 1 "/usr/lib/gcc/x86_64-linux-gnu/4.7/include/stddef.h" 1 3 4 # 24 "/usr/include/x86_64-linux-gnu/sys/param.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/sys/types.h" 1 3 4 # 25 "/usr/include/x86_64-linux-gnu/sys/types.h" 3 4 # 1 "/usr/include/features.h" 1 3 4 # 341 "/usr/include/features.h" 3 4 # 1 "/usr/include/stdc-predef.h" 1 3 4 # 30 "/usr/include/stdc-predef.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/predefs.h" 1 3 4 # 31 "/usr/include/stdc-predef.h" 2 3 4 # 342 "/usr/include/features.h" 2 3 4 # 371 "/usr/include/features.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/sys/cdefs.h" 1 3 4 # 385 "/usr/include/x86_64-linux-gnu/sys/cdefs.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/wordsize.h" 1 3 4 # 386 "/usr/include/x86_64-linux-gnu/sys/cdefs.h" 2 3 4 # 372 "/usr/include/features.h" 2 3 4 # 395 "/usr/include/features.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/gnu/stubs.h" 1 3 4 # 10 "/usr/include/x86_64-linux-gnu/gnu/stubs.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/gnu/stubs-64.h" 1 3 4 # 11 "/usr/include/x86_64-linux-gnu/gnu/stubs.h" 2 3 4 # 396 "/usr/include/features.h" 2 3 4 # 26 "/usr/include/x86_64-linux-gnu/sys/types.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/types.h" 1 3 4 # 27 "/usr/include/x86_64-linux-gnu/bits/types.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/wordsize.h" 1 3 4 # 28 "/usr/include/x86_64-linux-gnu/bits/types.h" 2 3 4 typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; # 130 "/usr/include/x86_64-linux-gnu/bits/types.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/typesizes.h" 1 3 4 # 131 "/usr/include/x86_64-linux-gnu/bits/types.h" 2 3 4 typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned long int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef long int __suseconds_t; typedef int __daddr_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __fsword_t; typedef long int __ssize_t; typedef long int __syscall_slong_t; typedef unsigned long int __syscall_ulong_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; # 30 "/usr/include/x86_64-linux-gnu/sys/types.h" 2 3 4 typedef __u_char u_char; typedef __u_short u_short; typedef __u_int u_int; typedef __u_long u_long; typedef __quad_t quad_t; typedef __u_quad_t u_quad_t; typedef __fsid_t fsid_t; typedef __loff_t loff_t; typedef __ino_t ino_t; # 60 "/usr/include/x86_64-linux-gnu/sys/types.h" 3 4 typedef __dev_t dev_t; typedef __gid_t gid_t; typedef __mode_t mode_t; typedef __nlink_t nlink_t; typedef __uid_t uid_t; typedef __off_t off_t; # 98 "/usr/include/x86_64-linux-gnu/sys/types.h" 3 4 typedef __pid_t pid_t; typedef __id_t id_t; typedef __ssize_t ssize_t; typedef __daddr_t daddr_t; typedef __caddr_t caddr_t; typedef __key_t key_t; # 132 "/usr/include/x86_64-linux-gnu/sys/types.h" 3 4 # 1 "/usr/include/time.h" 1 3 4 # 57 "/usr/include/time.h" 3 4 typedef __clock_t clock_t; # 73 "/usr/include/time.h" 3 4 typedef __time_t time_t; # 91 "/usr/include/time.h" 3 4 typedef __clockid_t clockid_t; # 103 "/usr/include/time.h" 3 4 typedef __timer_t timer_t; # 133 "/usr/include/x86_64-linux-gnu/sys/types.h" 2 3 4 # 146 "/usr/include/x86_64-linux-gnu/sys/types.h" 3 4 # 1 "/usr/lib/gcc/x86_64-linux-gnu/4.7/include/stddef.h" 1 3 4 # 213 "/usr/lib/gcc/x86_64-linux-gnu/4.7/include/stddef.h" 3 4 typedef long unsigned int size_t; # 147 "/usr/include/x86_64-linux-gnu/sys/types.h" 2 3 4 typedef unsigned long int ulong; typedef unsigned short int ushort; typedef unsigned int uint; # 194 "/usr/include/x86_64-linux-gnu/sys/types.h" 3 4 typedef int int8_t __attribute__ ((__mode__ (__QI__))); typedef int int16_t __attribute__ ((__mode__ (__HI__))); typedef int int32_t __attribute__ ((__mode__ (__SI__))); typedef int int64_t __attribute__ ((__mode__ (__DI__))); typedef unsigned int u_int8_t __attribute__ ((__mode__ (__QI__))); typedef unsigned int u_int16_t __attribute__ ((__mode__ (__HI__))); typedef unsigned int u_int32_t __attribute__ ((__mode__ (__SI__))); typedef unsigned int u_int64_t __attribute__ ((__mode__ (__DI__))); typedef int register_t __attribute__ ((__mode__ (__word__))); # 216 "/usr/include/x86_64-linux-gnu/sys/types.h" 3 4 # 1 "/usr/include/endian.h" 1 3 4 # 36 "/usr/include/endian.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/endian.h" 1 3 4 # 37 "/usr/include/endian.h" 2 3 4 # 60 "/usr/include/endian.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/byteswap.h" 1 3 4 # 28 "/usr/include/x86_64-linux-gnu/bits/byteswap.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/wordsize.h" 1 3 4 # 29 "/usr/include/x86_64-linux-gnu/bits/byteswap.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/byteswap-16.h" 1 3 4 # 36 "/usr/include/x86_64-linux-gnu/bits/byteswap.h" 2 3 4 # 44 "/usr/include/x86_64-linux-gnu/bits/byteswap.h" 3 4 static __inline unsigned int __bswap_32 (unsigned int __bsx) { return __builtin_bswap32 (__bsx); } # 108 "/usr/include/x86_64-linux-gnu/bits/byteswap.h" 3 4 static __inline __uint64_t __bswap_64 (__uint64_t __bsx) { return __builtin_bswap64 (__bsx); } # 61 "/usr/include/endian.h" 2 3 4 # 217 "/usr/include/x86_64-linux-gnu/sys/types.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/sys/select.h" 1 3 4 # 30 "/usr/include/x86_64-linux-gnu/sys/select.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/select.h" 1 3 4 # 22 "/usr/include/x86_64-linux-gnu/bits/select.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/wordsize.h" 1 3 4 # 23 "/usr/include/x86_64-linux-gnu/bits/select.h" 2 3 4 # 31 "/usr/include/x86_64-linux-gnu/sys/select.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/sigset.h" 1 3 4 # 23 "/usr/include/x86_64-linux-gnu/bits/sigset.h" 3 4 typedef int __sig_atomic_t; typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; # 34 "/usr/include/x86_64-linux-gnu/sys/select.h" 2 3 4 typedef __sigset_t sigset_t; # 1 "/usr/include/time.h" 1 3 4 # 120 "/usr/include/time.h" 3 4 struct timespec { __time_t tv_sec; __syscall_slong_t tv_nsec; }; # 44 "/usr/include/x86_64-linux-gnu/sys/select.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/time.h" 1 3 4 # 30 "/usr/include/x86_64-linux-gnu/bits/time.h" 3 4 struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; # 46 "/usr/include/x86_64-linux-gnu/sys/select.h" 2 3 4 typedef __suseconds_t suseconds_t; typedef long int __fd_mask; # 64 "/usr/include/x86_64-linux-gnu/sys/select.h" 3 4 typedef struct { __fd_mask __fds_bits[1024 / (8 * (int) sizeof (__fd_mask))]; } fd_set; typedef __fd_mask fd_mask; # 96 "/usr/include/x86_64-linux-gnu/sys/select.h" 3 4 # 106 "/usr/include/x86_64-linux-gnu/sys/select.h" 3 4 extern int select (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, struct timeval *__restrict __timeout); # 118 "/usr/include/x86_64-linux-gnu/sys/select.h" 3 4 extern int pselect (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, const struct timespec *__restrict __timeout, const __sigset_t *__restrict __sigmask); # 131 "/usr/include/x86_64-linux-gnu/sys/select.h" 3 4 # 220 "/usr/include/x86_64-linux-gnu/sys/types.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/sys/sysmacros.h" 1 3 4 # 29 "/usr/include/x86_64-linux-gnu/sys/sysmacros.h" 3 4 __extension__ extern unsigned int gnu_dev_major (unsigned long long int __dev) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); __extension__ extern unsigned int gnu_dev_minor (unsigned long long int __dev) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); __extension__ extern unsigned long long int gnu_dev_makedev (unsigned int __major, unsigned int __minor) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); # 63 "/usr/include/x86_64-linux-gnu/sys/sysmacros.h" 3 4 # 223 "/usr/include/x86_64-linux-gnu/sys/types.h" 2 3 4 typedef __blksize_t blksize_t; typedef __blkcnt_t blkcnt_t; typedef __fsblkcnt_t fsblkcnt_t; typedef __fsfilcnt_t fsfilcnt_t; # 270 "/usr/include/x86_64-linux-gnu/sys/types.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/pthreadtypes.h" 1 3 4 # 21 "/usr/include/x86_64-linux-gnu/bits/pthreadtypes.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/wordsize.h" 1 3 4 # 22 "/usr/include/x86_64-linux-gnu/bits/pthreadtypes.h" 2 3 4 # 60 "/usr/include/x86_64-linux-gnu/bits/pthreadtypes.h" 3 4 typedef unsigned long int pthread_t; union pthread_attr_t { char __size[56]; long int __align; }; typedef union pthread_attr_t pthread_attr_t; typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; # 90 "/usr/include/x86_64-linux-gnu/bits/pthreadtypes.h" 3 4 typedef union { struct __pthread_mutex_s { int __lock; unsigned int __count; int __owner; unsigned int __nusers; int __kind; int __spins; __pthread_list_t __list; # 115 "/usr/include/x86_64-linux-gnu/bits/pthreadtypes.h" 3 4 } __data; char __size[40]; long int __align; } pthread_mutex_t; typedef union { char __size[4]; int __align; } pthread_mutexattr_t; typedef union { struct { int __lock; unsigned int __futex; __extension__ unsigned long long int __total_seq; __extension__ unsigned long long int __wakeup_seq; __extension__ unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; __extension__ long long int __align; } pthread_cond_t; typedef union { char __size[4]; int __align; } pthread_condattr_t; typedef unsigned int pthread_key_t; typedef int pthread_once_t; typedef union { struct { int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; unsigned int __flags; } __data; # 202 "/usr/include/x86_64-linux-gnu/bits/pthreadtypes.h" 3 4 char __size[56]; long int __align; } pthread_rwlock_t; typedef union { char __size[8]; long int __align; } pthread_rwlockattr_t; typedef volatile int pthread_spinlock_t; typedef union { char __size[32]; long int __align; } pthread_barrier_t; typedef union { char __size[4]; int __align; } pthread_barrierattr_t; # 271 "/usr/include/x86_64-linux-gnu/sys/types.h" 2 3 4 # 26 "/usr/include/x86_64-linux-gnu/sys/param.h" 2 3 4 # 1 "/usr/lib/gcc/x86_64-linux-gnu/4.7/include-fixed/limits.h" 1 3 4 # 34 "/usr/lib/gcc/x86_64-linux-gnu/4.7/include-fixed/limits.h" 3 4 # 1 "/usr/lib/gcc/x86_64-linux-gnu/4.7/include-fixed/syslimits.h" 1 3 4 # 1 "/usr/lib/gcc/x86_64-linux-gnu/4.7/include-fixed/limits.h" 1 3 4 # 169 "/usr/lib/gcc/x86_64-linux-gnu/4.7/include-fixed/limits.h" 3 4 # 1 "/usr/include/limits.h" 1 3 4 # 144 "/usr/include/limits.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/posix1_lim.h" 1 3 4 # 160 "/usr/include/x86_64-linux-gnu/bits/posix1_lim.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/local_lim.h" 1 3 4 # 38 "/usr/include/x86_64-linux-gnu/bits/local_lim.h" 3 4 # 1 "/usr/include/linux/limits.h" 1 3 4 # 39 "/usr/include/x86_64-linux-gnu/bits/local_lim.h" 2 3 4 # 161 "/usr/include/x86_64-linux-gnu/bits/posix1_lim.h" 2 3 4 # 145 "/usr/include/limits.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/posix2_lim.h" 1 3 4 # 149 "/usr/include/limits.h" 2 3 4 # 170 "/usr/lib/gcc/x86_64-linux-gnu/4.7/include-fixed/limits.h" 2 3 4 # 8 "/usr/lib/gcc/x86_64-linux-gnu/4.7/include-fixed/syslimits.h" 2 3 4 # 35 "/usr/lib/gcc/x86_64-linux-gnu/4.7/include-fixed/limits.h" 2 3 4 # 27 "/usr/include/x86_64-linux-gnu/sys/param.h" 2 3 4 # 1 "/usr/include/signal.h" 1 3 4 # 30 "/usr/include/signal.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/sigset.h" 1 3 4 # 103 "/usr/include/x86_64-linux-gnu/bits/sigset.h" 3 4 extern int __sigismember (const __sigset_t *, int); extern int __sigaddset (__sigset_t *, int); extern int __sigdelset (__sigset_t *, int); # 33 "/usr/include/signal.h" 2 3 4 typedef __sig_atomic_t sig_atomic_t; # 57 "/usr/include/signal.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/signum.h" 1 3 4 # 58 "/usr/include/signal.h" 2 3 4 # 75 "/usr/include/signal.h" 3 4 # 1 "/usr/include/time.h" 1 3 4 # 76 "/usr/include/signal.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/siginfo.h" 1 3 4 # 24 "/usr/include/x86_64-linux-gnu/bits/siginfo.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/wordsize.h" 1 3 4 # 25 "/usr/include/x86_64-linux-gnu/bits/siginfo.h" 2 3 4 typedef union sigval { int sival_int; void *sival_ptr; } sigval_t; # 58 "/usr/include/x86_64-linux-gnu/bits/siginfo.h" 3 4 typedef __clock_t __sigchld_clock_t; typedef struct { int si_signo; int si_errno; int si_code; union { int _pad[((128 / sizeof (int)) - 4)]; struct { __pid_t si_pid; __uid_t si_uid; } _kill; struct { int si_tid; int si_overrun; sigval_t si_sigval; } _timer; struct { __pid_t si_pid; __uid_t si_uid; sigval_t si_sigval; } _rt; struct { __pid_t si_pid; __uid_t si_uid; int si_status; __sigchld_clock_t si_utime; __sigchld_clock_t si_stime; } _sigchld; struct { void *si_addr; } _sigfault; struct { long int si_band; int si_fd; } _sigpoll; struct { void *_call_addr; int _syscall; unsigned int _arch; } _sigsys; } _sifields; } siginfo_t ; # 151 "/usr/include/x86_64-linux-gnu/bits/siginfo.h" 3 4 enum { SI_ASYNCNL = -60, SI_TKILL = -6, SI_SIGIO, SI_ASYNCIO, SI_MESGQ, SI_TIMER, SI_QUEUE, SI_USER, SI_KERNEL = 0x80 }; enum { ILL_ILLOPC = 1, ILL_ILLOPN, ILL_ILLADR, ILL_ILLTRP, ILL_PRVOPC, ILL_PRVREG, ILL_COPROC, ILL_BADSTK }; enum { FPE_INTDIV = 1, FPE_INTOVF, FPE_FLTDIV, FPE_FLTOVF, FPE_FLTUND, FPE_FLTRES, FPE_FLTINV, FPE_FLTSUB }; enum { SEGV_MAPERR = 1, SEGV_ACCERR }; enum { BUS_ADRALN = 1, BUS_ADRERR, BUS_OBJERR }; enum { TRAP_BRKPT = 1, TRAP_TRACE }; enum { CLD_EXITED = 1, CLD_KILLED, CLD_DUMPED, CLD_TRAPPED, CLD_STOPPED, CLD_CONTINUED }; enum { POLL_IN = 1, POLL_OUT, POLL_MSG, POLL_ERR, POLL_PRI, POLL_HUP }; # 301 "/usr/include/x86_64-linux-gnu/bits/siginfo.h" 3 4 typedef struct sigevent { sigval_t sigev_value; int sigev_signo; int sigev_notify; union { int _pad[((64 / sizeof (int)) - 4)]; __pid_t _tid; struct { void (*_function) (sigval_t); pthread_attr_t *_attribute; } _sigev_thread; } _sigev_un; } sigevent_t; enum { SIGEV_SIGNAL = 0, SIGEV_NONE, SIGEV_THREAD, SIGEV_THREAD_ID = 4 }; # 81 "/usr/include/signal.h" 2 3 4 typedef void (*__sighandler_t) (int); extern __sighandler_t __sysv_signal (int __sig, __sighandler_t __handler) __attribute__ ((__nothrow__ , __leaf__)); # 100 "/usr/include/signal.h" 3 4 extern __sighandler_t signal (int __sig, __sighandler_t __handler) __attribute__ ((__nothrow__ , __leaf__)); # 114 "/usr/include/signal.h" 3 4 # 127 "/usr/include/signal.h" 3 4 extern int kill (__pid_t __pid, int __sig) __attribute__ ((__nothrow__ , __leaf__)); extern int killpg (__pid_t __pgrp, int __sig) __attribute__ ((__nothrow__ , __leaf__)); extern int raise (int __sig) __attribute__ ((__nothrow__ , __leaf__)); extern __sighandler_t ssignal (int __sig, __sighandler_t __handler) __attribute__ ((__nothrow__ , __leaf__)); extern int gsignal (int __sig) __attribute__ ((__nothrow__ , __leaf__)); extern void psignal (int __sig, const char *__s); extern void psiginfo (const siginfo_t *__pinfo, const char *__s); # 169 "/usr/include/signal.h" 3 4 extern int __sigpause (int __sig_or_mask, int __is_sig); # 197 "/usr/include/signal.h" 3 4 extern int sigblock (int __mask) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__deprecated__)); extern int sigsetmask (int __mask) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__deprecated__)); extern int siggetmask (void) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__deprecated__)); # 217 "/usr/include/signal.h" 3 4 typedef __sighandler_t sig_t; extern int sigemptyset (sigset_t *__set) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern int sigfillset (sigset_t *__set) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern int sigaddset (sigset_t *__set, int __signo) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern int sigdelset (sigset_t *__set, int __signo) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern int sigismember (const sigset_t *__set, int __signo) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); # 253 "/usr/include/signal.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/sigaction.h" 1 3 4 # 24 "/usr/include/x86_64-linux-gnu/bits/sigaction.h" 3 4 struct sigaction { union { __sighandler_t sa_handler; void (*sa_sigaction) (int, siginfo_t *, void *); } __sigaction_handler; __sigset_t sa_mask; int sa_flags; void (*sa_restorer) (void); }; # 254 "/usr/include/signal.h" 2 3 4 extern int sigprocmask (int __how, const sigset_t *__restrict __set, sigset_t *__restrict __oset) __attribute__ ((__nothrow__ , __leaf__)); extern int sigsuspend (const sigset_t *__set) __attribute__ ((__nonnull__ (1))); extern int sigaction (int __sig, const struct sigaction *__restrict __act, struct sigaction *__restrict __oact) __attribute__ ((__nothrow__ , __leaf__)); extern int sigpending (sigset_t *__set) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern int sigwait (const sigset_t *__restrict __set, int *__restrict __sig) __attribute__ ((__nonnull__ (1, 2))); extern int sigwaitinfo (const sigset_t *__restrict __set, siginfo_t *__restrict __info) __attribute__ ((__nonnull__ (1))); extern int sigtimedwait (const sigset_t *__restrict __set, siginfo_t *__restrict __info, const struct timespec *__restrict __timeout) __attribute__ ((__nonnull__ (1))); extern int sigqueue (__pid_t __pid, int __sig, const union sigval __val) __attribute__ ((__nothrow__ , __leaf__)); # 311 "/usr/include/signal.h" 3 4 extern const char *const _sys_siglist[65]; extern const char *const sys_siglist[65]; struct sigvec { __sighandler_t sv_handler; int sv_mask; int sv_flags; }; # 335 "/usr/include/signal.h" 3 4 extern int sigvec (int __sig, const struct sigvec *__vec, struct sigvec *__ovec) __attribute__ ((__nothrow__ , __leaf__)); # 1 "/usr/include/x86_64-linux-gnu/bits/sigcontext.h" 1 3 4 # 29 "/usr/include/x86_64-linux-gnu/bits/sigcontext.h" 3 4 struct _fpx_sw_bytes { __uint32_t magic1; __uint32_t extended_size; __uint64_t xstate_bv; __uint32_t xstate_size; __uint32_t padding[7]; }; struct _fpreg { unsigned short significand[4]; unsigned short exponent; }; struct _fpxreg { unsigned short significand[4]; unsigned short exponent; unsigned short padding[3]; }; struct _xmmreg { __uint32_t element[4]; }; # 121 "/usr/include/x86_64-linux-gnu/bits/sigcontext.h" 3 4 struct _fpstate { __uint16_t cwd; __uint16_t swd; __uint16_t ftw; __uint16_t fop; __uint64_t rip; __uint64_t rdp; __uint32_t mxcsr; __uint32_t mxcr_mask; struct _fpxreg _st[8]; struct _xmmreg _xmm[16]; __uint32_t padding[24]; }; struct sigcontext { __uint64_t r8; __uint64_t r9; __uint64_t r10; __uint64_t r11; __uint64_t r12; __uint64_t r13; __uint64_t r14; __uint64_t r15; __uint64_t rdi; __uint64_t rsi; __uint64_t rbp; __uint64_t rbx; __uint64_t rdx; __uint64_t rax; __uint64_t rcx; __uint64_t rsp; __uint64_t rip; __uint64_t eflags; unsigned short cs; unsigned short gs; unsigned short fs; unsigned short __pad0; __uint64_t err; __uint64_t trapno; __uint64_t oldmask; __uint64_t cr2; __extension__ union { struct _fpstate * fpstate; __uint64_t __fpstate_word; }; __uint64_t __reserved1 [8]; }; struct _xsave_hdr { __uint64_t xstate_bv; __uint64_t reserved1[2]; __uint64_t reserved2[5]; }; struct _ymmh_state { __uint32_t ymmh_space[64]; }; struct _xstate { struct _fpstate fpstate; struct _xsave_hdr xstate_hdr; struct _ymmh_state ymmh; }; # 341 "/usr/include/signal.h" 2 3 4 extern int sigreturn (struct sigcontext *__scp) __attribute__ ((__nothrow__ , __leaf__)); # 1 "/usr/lib/gcc/x86_64-linux-gnu/4.7/include/stddef.h" 1 3 4 # 351 "/usr/include/signal.h" 2 3 4 extern int siginterrupt (int __sig, int __interrupt) __attribute__ ((__nothrow__ , __leaf__)); # 1 "/usr/include/x86_64-linux-gnu/bits/sigstack.h" 1 3 4 # 25 "/usr/include/x86_64-linux-gnu/bits/sigstack.h" 3 4 struct sigstack { void *ss_sp; int ss_onstack; }; enum { SS_ONSTACK = 1, SS_DISABLE }; # 49 "/usr/include/x86_64-linux-gnu/bits/sigstack.h" 3 4 typedef struct sigaltstack { void *ss_sp; int ss_flags; size_t ss_size; } stack_t; # 358 "/usr/include/signal.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/sys/ucontext.h" 1 3 4 # 22 "/usr/include/x86_64-linux-gnu/sys/ucontext.h" 3 4 # 1 "/usr/include/signal.h" 1 3 4 # 23 "/usr/include/x86_64-linux-gnu/sys/ucontext.h" 2 3 4 # 31 "/usr/include/x86_64-linux-gnu/sys/ucontext.h" 3 4 __extension__ typedef long long int greg_t; typedef greg_t gregset_t[23]; # 92 "/usr/include/x86_64-linux-gnu/sys/ucontext.h" 3 4 struct _libc_fpxreg { unsigned short int significand[4]; unsigned short int exponent; unsigned short int padding[3]; }; struct _libc_xmmreg { __uint32_t element[4]; }; struct _libc_fpstate { __uint16_t cwd; __uint16_t swd; __uint16_t ftw; __uint16_t fop; __uint64_t rip; __uint64_t rdp; __uint32_t mxcsr; __uint32_t mxcr_mask; struct _libc_fpxreg _st[8]; struct _libc_xmmreg _xmm[16]; __uint32_t padding[24]; }; typedef struct _libc_fpstate *fpregset_t; typedef struct { gregset_t gregs; fpregset_t fpregs; __extension__ unsigned long long __reserved1 [8]; } mcontext_t; typedef struct ucontext { unsigned long int uc_flags; struct ucontext *uc_link; stack_t uc_stack; mcontext_t uc_mcontext; __sigset_t uc_sigmask; struct _libc_fpstate __fpregs_mem; } ucontext_t; # 361 "/usr/include/signal.h" 2 3 4 extern int sigstack (struct sigstack *__ss, struct sigstack *__oss) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__deprecated__)); extern int sigaltstack (const struct sigaltstack *__restrict __ss, struct sigaltstack *__restrict __oss) __attribute__ ((__nothrow__ , __leaf__)); # 396 "/usr/include/signal.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/sigthread.h" 1 3 4 # 30 "/usr/include/x86_64-linux-gnu/bits/sigthread.h" 3 4 extern int pthread_sigmask (int __how, const __sigset_t *__restrict __newmask, __sigset_t *__restrict __oldmask)__attribute__ ((__nothrow__ , __leaf__)); extern int pthread_kill (pthread_t __threadid, int __signo) __attribute__ ((__nothrow__ , __leaf__)); # 397 "/usr/include/signal.h" 2 3 4 extern int __libc_current_sigrtmin (void) __attribute__ ((__nothrow__ , __leaf__)); extern int __libc_current_sigrtmax (void) __attribute__ ((__nothrow__ , __leaf__)); # 29 "/usr/include/x86_64-linux-gnu/sys/param.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/param.h" 1 3 4 # 28 "/usr/include/x86_64-linux-gnu/bits/param.h" 3 4 # 1 "/usr/include/linux/param.h" 1 3 4 # 1 "/usr/include/x86_64-linux-gnu/asm/param.h" 1 3 4 # 1 "/usr/include/asm-generic/param.h" 1 3 4 # 1 "/usr/include/x86_64-linux-gnu/asm/param.h" 2 3 4 # 5 "/usr/include/linux/param.h" 2 3 4 # 29 "/usr/include/x86_64-linux-gnu/bits/param.h" 2 3 4 # 32 "/usr/include/x86_64-linux-gnu/sys/param.h" 2 3 4 # 3 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 Defined "HAVE_SYS_PARAM_H" to "1" ================================================================================ TEST check from config.headers(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: netdb.h sh: tau_cc.sh -E -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.headers /tmp/petsc-U9YCMv/config.headers/conftest.c Executing: tau_cc.sh -E -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.headers /tmp/petsc-U9YCMv/config.headers/conftest.c sh: # 1 "/tmp/petsc-U9YCMv/config.headers/conftest.c" # 1 "" # 1 "/tmp/petsc-U9YCMv/config.headers/conftest.c" # 1 "/tmp/petsc-U9YCMv/config.headers/confdefs.h" 1 # 2 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 # 1 "/tmp/petsc-U9YCMv/config.headers/conffix.h" 1 # 3 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 # 1 "/usr/include/netdb.h" 1 3 4 # 25 "/usr/include/netdb.h" 3 4 # 1 "/usr/include/features.h" 1 3 4 # 341 "/usr/include/features.h" 3 4 # 1 "/usr/include/stdc-predef.h" 1 3 4 # 30 "/usr/include/stdc-predef.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/predefs.h" 1 3 4 # 31 "/usr/include/stdc-predef.h" 2 3 4 # 342 "/usr/include/features.h" 2 3 4 # 371 "/usr/include/features.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/sys/cdefs.h" 1 3 4 # 385 "/usr/include/x86_64-linux-gnu/sys/cdefs.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/wordsize.h" 1 3 4 # 386 "/usr/include/x86_64-linux-gnu/sys/cdefs.h" 2 3 4 # 372 "/usr/include/features.h" 2 3 4 # 395 "/usr/include/features.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/gnu/stubs.h" 1 3 4 # 10 "/usr/include/x86_64-linux-gnu/gnu/stubs.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/gnu/stubs-64.h" 1 3 4 # 11 "/usr/include/x86_64-linux-gnu/gnu/stubs.h" 2 3 4 # 396 "/usr/include/features.h" 2 3 4 # 26 "/usr/include/netdb.h" 2 3 4 # 1 "/usr/include/netinet/in.h" 1 3 4 # 23 "/usr/include/netinet/in.h" 3 4 # 1 "/usr/lib/gcc/x86_64-linux-gnu/4.7/include/stdint.h" 1 3 4 # 1 "/usr/include/stdint.h" 1 3 4 # 26 "/usr/include/stdint.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/wchar.h" 1 3 4 # 27 "/usr/include/stdint.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/wordsize.h" 1 3 4 # 28 "/usr/include/stdint.h" 2 3 4 # 36 "/usr/include/stdint.h" 3 4 typedef signed char int8_t; typedef short int int16_t; typedef int int32_t; typedef long int int64_t; typedef unsigned char uint8_t; typedef unsigned short int uint16_t; typedef unsigned int uint32_t; typedef unsigned long int uint64_t; # 65 "/usr/include/stdint.h" 3 4 typedef signed char int_least8_t; typedef short int int_least16_t; typedef int int_least32_t; typedef long int int_least64_t; typedef unsigned char uint_least8_t; typedef unsigned short int uint_least16_t; typedef unsigned int uint_least32_t; typedef unsigned long int uint_least64_t; # 90 "/usr/include/stdint.h" 3 4 typedef signed char int_fast8_t; typedef long int int_fast16_t; typedef long int int_fast32_t; typedef long int int_fast64_t; # 103 "/usr/include/stdint.h" 3 4 typedef unsigned char uint_fast8_t; typedef unsigned long int uint_fast16_t; typedef unsigned long int uint_fast32_t; typedef unsigned long int uint_fast64_t; # 119 "/usr/include/stdint.h" 3 4 typedef long int intptr_t; typedef unsigned long int uintptr_t; # 134 "/usr/include/stdint.h" 3 4 typedef long int intmax_t; typedef unsigned long int uintmax_t; # 4 "/usr/lib/gcc/x86_64-linux-gnu/4.7/include/stdint.h" 2 3 4 # 24 "/usr/include/netinet/in.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/sys/socket.h" 1 3 4 # 25 "/usr/include/x86_64-linux-gnu/sys/socket.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/sys/uio.h" 1 3 4 # 24 "/usr/include/x86_64-linux-gnu/sys/uio.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/sys/types.h" 1 3 4 # 27 "/usr/include/x86_64-linux-gnu/sys/types.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/types.h" 1 3 4 # 27 "/usr/include/x86_64-linux-gnu/bits/types.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/wordsize.h" 1 3 4 # 28 "/usr/include/x86_64-linux-gnu/bits/types.h" 2 3 4 typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; # 130 "/usr/include/x86_64-linux-gnu/bits/types.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/typesizes.h" 1 3 4 # 131 "/usr/include/x86_64-linux-gnu/bits/types.h" 2 3 4 typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned long int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef long int __suseconds_t; typedef int __daddr_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __fsword_t; typedef long int __ssize_t; typedef long int __syscall_slong_t; typedef unsigned long int __syscall_ulong_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; # 30 "/usr/include/x86_64-linux-gnu/sys/types.h" 2 3 4 typedef __u_char u_char; typedef __u_short u_short; typedef __u_int u_int; typedef __u_long u_long; typedef __quad_t quad_t; typedef __u_quad_t u_quad_t; typedef __fsid_t fsid_t; typedef __loff_t loff_t; typedef __ino_t ino_t; # 60 "/usr/include/x86_64-linux-gnu/sys/types.h" 3 4 typedef __dev_t dev_t; typedef __gid_t gid_t; typedef __mode_t mode_t; typedef __nlink_t nlink_t; typedef __uid_t uid_t; typedef __off_t off_t; # 98 "/usr/include/x86_64-linux-gnu/sys/types.h" 3 4 typedef __pid_t pid_t; typedef __id_t id_t; typedef __ssize_t ssize_t; typedef __daddr_t daddr_t; typedef __caddr_t caddr_t; typedef __key_t key_t; # 132 "/usr/include/x86_64-linux-gnu/sys/types.h" 3 4 # 1 "/usr/include/time.h" 1 3 4 # 57 "/usr/include/time.h" 3 4 typedef __clock_t clock_t; # 73 "/usr/include/time.h" 3 4 typedef __time_t time_t; # 91 "/usr/include/time.h" 3 4 typedef __clockid_t clockid_t; # 103 "/usr/include/time.h" 3 4 typedef __timer_t timer_t; # 133 "/usr/include/x86_64-linux-gnu/sys/types.h" 2 3 4 # 146 "/usr/include/x86_64-linux-gnu/sys/types.h" 3 4 # 1 "/usr/lib/gcc/x86_64-linux-gnu/4.7/include/stddef.h" 1 3 4 # 213 "/usr/lib/gcc/x86_64-linux-gnu/4.7/include/stddef.h" 3 4 typedef long unsigned int size_t; # 147 "/usr/include/x86_64-linux-gnu/sys/types.h" 2 3 4 typedef unsigned long int ulong; typedef unsigned short int ushort; typedef unsigned int uint; # 200 "/usr/include/x86_64-linux-gnu/sys/types.h" 3 4 typedef unsigned int u_int8_t __attribute__ ((__mode__ (__QI__))); typedef unsigned int u_int16_t __attribute__ ((__mode__ (__HI__))); typedef unsigned int u_int32_t __attribute__ ((__mode__ (__SI__))); typedef unsigned int u_int64_t __attribute__ ((__mode__ (__DI__))); typedef int register_t __attribute__ ((__mode__ (__word__))); # 216 "/usr/include/x86_64-linux-gnu/sys/types.h" 3 4 # 1 "/usr/include/endian.h" 1 3 4 # 36 "/usr/include/endian.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/endian.h" 1 3 4 # 37 "/usr/include/endian.h" 2 3 4 # 60 "/usr/include/endian.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/byteswap.h" 1 3 4 # 28 "/usr/include/x86_64-linux-gnu/bits/byteswap.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/wordsize.h" 1 3 4 # 29 "/usr/include/x86_64-linux-gnu/bits/byteswap.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/byteswap-16.h" 1 3 4 # 36 "/usr/include/x86_64-linux-gnu/bits/byteswap.h" 2 3 4 # 44 "/usr/include/x86_64-linux-gnu/bits/byteswap.h" 3 4 static __inline unsigned int __bswap_32 (unsigned int __bsx) { return __builtin_bswap32 (__bsx); } # 108 "/usr/include/x86_64-linux-gnu/bits/byteswap.h" 3 4 static __inline __uint64_t __bswap_64 (__uint64_t __bsx) { return __builtin_bswap64 (__bsx); } # 61 "/usr/include/endian.h" 2 3 4 # 217 "/usr/include/x86_64-linux-gnu/sys/types.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/sys/select.h" 1 3 4 # 30 "/usr/include/x86_64-linux-gnu/sys/select.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/select.h" 1 3 4 # 22 "/usr/include/x86_64-linux-gnu/bits/select.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/wordsize.h" 1 3 4 # 23 "/usr/include/x86_64-linux-gnu/bits/select.h" 2 3 4 # 31 "/usr/include/x86_64-linux-gnu/sys/select.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/sigset.h" 1 3 4 # 23 "/usr/include/x86_64-linux-gnu/bits/sigset.h" 3 4 typedef int __sig_atomic_t; typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; # 34 "/usr/include/x86_64-linux-gnu/sys/select.h" 2 3 4 typedef __sigset_t sigset_t; # 1 "/usr/include/time.h" 1 3 4 # 120 "/usr/include/time.h" 3 4 struct timespec { __time_t tv_sec; __syscall_slong_t tv_nsec; }; # 44 "/usr/include/x86_64-linux-gnu/sys/select.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/time.h" 1 3 4 # 30 "/usr/include/x86_64-linux-gnu/bits/time.h" 3 4 struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; # 46 "/usr/include/x86_64-linux-gnu/sys/select.h" 2 3 4 typedef __suseconds_t suseconds_t; typedef long int __fd_mask; # 64 "/usr/include/x86_64-linux-gnu/sys/select.h" 3 4 typedef struct { __fd_mask __fds_bits[1024 / (8 * (int) sizeof (__fd_mask))]; } fd_set; typedef __fd_mask fd_mask; # 96 "/usr/include/x86_64-linux-gnu/sys/select.h" 3 4 # 106 "/usr/include/x86_64-linux-gnu/sys/select.h" 3 4 extern int select (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, struct timeval *__restrict __timeout); # 118 "/usr/include/x86_64-linux-gnu/sys/select.h" 3 4 extern int pselect (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, const struct timespec *__restrict __timeout, const __sigset_t *__restrict __sigmask); # 131 "/usr/include/x86_64-linux-gnu/sys/select.h" 3 4 # 220 "/usr/include/x86_64-linux-gnu/sys/types.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/sys/sysmacros.h" 1 3 4 # 29 "/usr/include/x86_64-linux-gnu/sys/sysmacros.h" 3 4 __extension__ extern unsigned int gnu_dev_major (unsigned long long int __dev) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); __extension__ extern unsigned int gnu_dev_minor (unsigned long long int __dev) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); __extension__ extern unsigned long long int gnu_dev_makedev (unsigned int __major, unsigned int __minor) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); # 63 "/usr/include/x86_64-linux-gnu/sys/sysmacros.h" 3 4 # 223 "/usr/include/x86_64-linux-gnu/sys/types.h" 2 3 4 typedef __blksize_t blksize_t; typedef __blkcnt_t blkcnt_t; typedef __fsblkcnt_t fsblkcnt_t; typedef __fsfilcnt_t fsfilcnt_t; # 270 "/usr/include/x86_64-linux-gnu/sys/types.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/pthreadtypes.h" 1 3 4 # 21 "/usr/include/x86_64-linux-gnu/bits/pthreadtypes.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/wordsize.h" 1 3 4 # 22 "/usr/include/x86_64-linux-gnu/bits/pthreadtypes.h" 2 3 4 # 60 "/usr/include/x86_64-linux-gnu/bits/pthreadtypes.h" 3 4 typedef unsigned long int pthread_t; union pthread_attr_t { char __size[56]; long int __align; }; typedef union pthread_attr_t pthread_attr_t; typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; # 90 "/usr/include/x86_64-linux-gnu/bits/pthreadtypes.h" 3 4 typedef union { struct __pthread_mutex_s { int __lock; unsigned int __count; int __owner; unsigned int __nusers; int __kind; int __spins; __pthread_list_t __list; # 115 "/usr/include/x86_64-linux-gnu/bits/pthreadtypes.h" 3 4 } __data; char __size[40]; long int __align; } pthread_mutex_t; typedef union { char __size[4]; int __align; } pthread_mutexattr_t; typedef union { struct { int __lock; unsigned int __futex; __extension__ unsigned long long int __total_seq; __extension__ unsigned long long int __wakeup_seq; __extension__ unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; __extension__ long long int __align; } pthread_cond_t; typedef union { char __size[4]; int __align; } pthread_condattr_t; typedef unsigned int pthread_key_t; typedef int pthread_once_t; typedef union { struct { int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; unsigned int __flags; } __data; # 202 "/usr/include/x86_64-linux-gnu/bits/pthreadtypes.h" 3 4 char __size[56]; long int __align; } pthread_rwlock_t; typedef union { char __size[8]; long int __align; } pthread_rwlockattr_t; typedef volatile int pthread_spinlock_t; typedef union { char __size[32]; long int __align; } pthread_barrier_t; typedef union { char __size[4]; int __align; } pthread_barrierattr_t; # 271 "/usr/include/x86_64-linux-gnu/sys/types.h" 2 3 4 # 25 "/usr/include/x86_64-linux-gnu/sys/uio.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/uio.h" 1 3 4 # 43 "/usr/include/x86_64-linux-gnu/bits/uio.h" 3 4 struct iovec { void *iov_base; size_t iov_len; }; # 30 "/usr/include/x86_64-linux-gnu/sys/uio.h" 2 3 4 # 40 "/usr/include/x86_64-linux-gnu/sys/uio.h" 3 4 extern ssize_t readv (int __fd, const struct iovec *__iovec, int __count) ; # 51 "/usr/include/x86_64-linux-gnu/sys/uio.h" 3 4 extern ssize_t writev (int __fd, const struct iovec *__iovec, int __count) ; # 66 "/usr/include/x86_64-linux-gnu/sys/uio.h" 3 4 extern ssize_t preadv (int __fd, const struct iovec *__iovec, int __count, __off_t __offset) ; # 78 "/usr/include/x86_64-linux-gnu/sys/uio.h" 3 4 extern ssize_t pwritev (int __fd, const struct iovec *__iovec, int __count, __off_t __offset) ; # 121 "/usr/include/x86_64-linux-gnu/sys/uio.h" 3 4 # 28 "/usr/include/x86_64-linux-gnu/sys/socket.h" 2 3 4 # 1 "/usr/lib/gcc/x86_64-linux-gnu/4.7/include/stddef.h" 1 3 4 # 30 "/usr/include/x86_64-linux-gnu/sys/socket.h" 2 3 4 # 39 "/usr/include/x86_64-linux-gnu/sys/socket.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/socket.h" 1 3 4 # 27 "/usr/include/x86_64-linux-gnu/bits/socket.h" 3 4 # 1 "/usr/lib/gcc/x86_64-linux-gnu/4.7/include/stddef.h" 1 3 4 # 28 "/usr/include/x86_64-linux-gnu/bits/socket.h" 2 3 4 typedef __socklen_t socklen_t; # 1 "/usr/include/x86_64-linux-gnu/bits/socket_type.h" 1 3 4 # 24 "/usr/include/x86_64-linux-gnu/bits/socket_type.h" 3 4 enum __socket_type { SOCK_STREAM = 1, SOCK_DGRAM = 2, SOCK_RAW = 3, SOCK_RDM = 4, SOCK_SEQPACKET = 5, SOCK_DCCP = 6, SOCK_PACKET = 10, SOCK_CLOEXEC = 02000000, SOCK_NONBLOCK = 00004000 }; # 39 "/usr/include/x86_64-linux-gnu/bits/socket.h" 2 3 4 # 144 "/usr/include/x86_64-linux-gnu/bits/socket.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/sockaddr.h" 1 3 4 # 28 "/usr/include/x86_64-linux-gnu/bits/sockaddr.h" 3 4 typedef unsigned short int sa_family_t; # 145 "/usr/include/x86_64-linux-gnu/bits/socket.h" 2 3 4 struct sockaddr { sa_family_t sa_family; char sa_data[14]; }; # 160 "/usr/include/x86_64-linux-gnu/bits/socket.h" 3 4 struct sockaddr_storage { sa_family_t ss_family; unsigned long int __ss_align; char __ss_padding[(128 - (2 * sizeof (unsigned long int)))]; }; enum { MSG_OOB = 0x01, MSG_PEEK = 0x02, MSG_DONTROUTE = 0x04, MSG_CTRUNC = 0x08, MSG_PROXY = 0x10, MSG_TRUNC = 0x20, MSG_DONTWAIT = 0x40, MSG_EOR = 0x80, MSG_WAITALL = 0x100, MSG_FIN = 0x200, MSG_SYN = 0x400, MSG_CONFIRM = 0x800, MSG_RST = 0x1000, MSG_ERRQUEUE = 0x2000, MSG_NOSIGNAL = 0x4000, MSG_MORE = 0x8000, MSG_WAITFORONE = 0x10000, MSG_FASTOPEN = 0x20000000, MSG_CMSG_CLOEXEC = 0x40000000 }; struct msghdr { void *msg_name; socklen_t msg_namelen; struct iovec *msg_iov; size_t msg_iovlen; void *msg_control; size_t msg_controllen; int msg_flags; }; struct cmsghdr { size_t cmsg_len; int cmsg_level; int cmsg_type; __extension__ unsigned char __cmsg_data []; }; # 270 "/usr/include/x86_64-linux-gnu/bits/socket.h" 3 4 extern struct cmsghdr *__cmsg_nxthdr (struct msghdr *__mhdr, struct cmsghdr *__cmsg) __attribute__ ((__nothrow__ , __leaf__)); # 297 "/usr/include/x86_64-linux-gnu/bits/socket.h" 3 4 enum { SCM_RIGHTS = 0x01 }; # 343 "/usr/include/x86_64-linux-gnu/bits/socket.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/asm/socket.h" 1 3 4 # 1 "/usr/include/asm-generic/socket.h" 1 3 4 # 1 "/usr/include/x86_64-linux-gnu/asm/sockios.h" 1 3 4 # 1 "/usr/include/asm-generic/sockios.h" 1 3 4 # 1 "/usr/include/x86_64-linux-gnu/asm/sockios.h" 2 3 4 # 5 "/usr/include/asm-generic/socket.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/asm/socket.h" 2 3 4 # 344 "/usr/include/x86_64-linux-gnu/bits/socket.h" 2 3 4 # 377 "/usr/include/x86_64-linux-gnu/bits/socket.h" 3 4 struct linger { int l_onoff; int l_linger; }; # 40 "/usr/include/x86_64-linux-gnu/sys/socket.h" 2 3 4 struct osockaddr { unsigned short int sa_family; unsigned char sa_data[14]; }; enum { SHUT_RD = 0, SHUT_WR, SHUT_RDWR }; # 114 "/usr/include/x86_64-linux-gnu/sys/socket.h" 3 4 extern int socket (int __domain, int __type, int __protocol) __attribute__ ((__nothrow__ , __leaf__)); extern int socketpair (int __domain, int __type, int __protocol, int __fds[2]) __attribute__ ((__nothrow__ , __leaf__)); extern int bind (int __fd, const struct sockaddr * __addr, socklen_t __len) __attribute__ ((__nothrow__ , __leaf__)); extern int getsockname (int __fd, struct sockaddr *__restrict __addr, socklen_t *__restrict __len) __attribute__ ((__nothrow__ , __leaf__)); # 138 "/usr/include/x86_64-linux-gnu/sys/socket.h" 3 4 extern int connect (int __fd, const struct sockaddr * __addr, socklen_t __len); extern int getpeername (int __fd, struct sockaddr *__restrict __addr, socklen_t *__restrict __len) __attribute__ ((__nothrow__ , __leaf__)); extern ssize_t send (int __fd, const void *__buf, size_t __n, int __flags); extern ssize_t recv (int __fd, void *__buf, size_t __n, int __flags); extern ssize_t sendto (int __fd, const void *__buf, size_t __n, int __flags, const struct sockaddr * __addr, socklen_t __addr_len); # 175 "/usr/include/x86_64-linux-gnu/sys/socket.h" 3 4 extern ssize_t recvfrom (int __fd, void *__restrict __buf, size_t __n, int __flags, struct sockaddr *__restrict __addr, socklen_t *__restrict __addr_len); extern ssize_t sendmsg (int __fd, const struct msghdr *__message, int __flags); # 203 "/usr/include/x86_64-linux-gnu/sys/socket.h" 3 4 extern ssize_t recvmsg (int __fd, struct msghdr *__message, int __flags); # 220 "/usr/include/x86_64-linux-gnu/sys/socket.h" 3 4 extern int getsockopt (int __fd, int __level, int __optname, void *__restrict __optval, socklen_t *__restrict __optlen) __attribute__ ((__nothrow__ , __leaf__)); extern int setsockopt (int __fd, int __level, int __optname, const void *__optval, socklen_t __optlen) __attribute__ ((__nothrow__ , __leaf__)); extern int listen (int __fd, int __n) __attribute__ ((__nothrow__ , __leaf__)); # 244 "/usr/include/x86_64-linux-gnu/sys/socket.h" 3 4 extern int accept (int __fd, struct sockaddr *__restrict __addr, socklen_t *__restrict __addr_len); # 262 "/usr/include/x86_64-linux-gnu/sys/socket.h" 3 4 extern int shutdown (int __fd, int __how) __attribute__ ((__nothrow__ , __leaf__)); extern int sockatmark (int __fd) __attribute__ ((__nothrow__ , __leaf__)); extern int isfdtype (int __fd, int __fdtype) __attribute__ ((__nothrow__ , __leaf__)); # 284 "/usr/include/x86_64-linux-gnu/sys/socket.h" 3 4 # 25 "/usr/include/netinet/in.h" 2 3 4 enum { IPPROTO_IP = 0, IPPROTO_HOPOPTS = 0, IPPROTO_ICMP = 1, IPPROTO_IGMP = 2, IPPROTO_IPIP = 4, IPPROTO_TCP = 6, IPPROTO_EGP = 8, IPPROTO_PUP = 12, IPPROTO_UDP = 17, IPPROTO_IDP = 22, IPPROTO_TP = 29, IPPROTO_DCCP = 33, IPPROTO_IPV6 = 41, IPPROTO_ROUTING = 43, IPPROTO_FRAGMENT = 44, IPPROTO_RSVP = 46, IPPROTO_GRE = 47, IPPROTO_ESP = 50, IPPROTO_AH = 51, IPPROTO_ICMPV6 = 58, IPPROTO_NONE = 59, IPPROTO_DSTOPTS = 60, IPPROTO_MTP = 92, IPPROTO_ENCAP = 98, IPPROTO_PIM = 103, IPPROTO_COMP = 108, IPPROTO_SCTP = 132, IPPROTO_UDPLITE = 136, IPPROTO_RAW = 255, IPPROTO_MAX }; typedef uint16_t in_port_t; enum { IPPORT_ECHO = 7, IPPORT_DISCARD = 9, IPPORT_SYSTAT = 11, IPPORT_DAYTIME = 13, IPPORT_NETSTAT = 15, IPPORT_FTP = 21, IPPORT_TELNET = 23, IPPORT_SMTP = 25, IPPORT_TIMESERVER = 37, IPPORT_NAMESERVER = 42, IPPORT_WHOIS = 43, IPPORT_MTP = 57, IPPORT_TFTP = 69, IPPORT_RJE = 77, IPPORT_FINGER = 79, IPPORT_TTYLINK = 87, IPPORT_SUPDUP = 95, IPPORT_EXECSERVER = 512, IPPORT_LOGINSERVER = 513, IPPORT_CMDSERVER = 514, IPPORT_EFSSERVER = 520, IPPORT_BIFFUDP = 512, IPPORT_WHOSERVER = 513, IPPORT_ROUTESERVER = 520, IPPORT_RESERVED = 1024, IPPORT_USERRESERVED = 5000 }; typedef uint32_t in_addr_t; struct in_addr { in_addr_t s_addr; }; # 197 "/usr/include/netinet/in.h" 3 4 struct in6_addr { union { uint8_t __u6_addr8[16]; uint16_t __u6_addr16[8]; uint32_t __u6_addr32[4]; } __in6_u; }; extern const struct in6_addr in6addr_any; extern const struct in6_addr in6addr_loopback; # 224 "/usr/include/netinet/in.h" 3 4 struct sockaddr_in { sa_family_t sin_family; in_port_t sin_port; struct in_addr sin_addr; unsigned char sin_zero[sizeof (struct sockaddr) - (sizeof (unsigned short int)) - sizeof (in_port_t) - sizeof (struct in_addr)]; }; struct sockaddr_in6 { sa_family_t sin6_family; in_port_t sin6_port; uint32_t sin6_flowinfo; struct in6_addr sin6_addr; uint32_t sin6_scope_id; }; struct ip_mreq { struct in_addr imr_multiaddr; struct in_addr imr_interface; }; struct ip_mreq_source { struct in_addr imr_multiaddr; struct in_addr imr_interface; struct in_addr imr_sourceaddr; }; struct ipv6_mreq { struct in6_addr ipv6mr_multiaddr; unsigned int ipv6mr_interface; }; struct group_req { uint32_t gr_interface; struct sockaddr_storage gr_group; }; struct group_source_req { uint32_t gsr_interface; struct sockaddr_storage gsr_group; struct sockaddr_storage gsr_source; }; struct ip_msfilter { struct in_addr imsf_multiaddr; struct in_addr imsf_interface; uint32_t imsf_fmode; uint32_t imsf_numsrc; struct in_addr imsf_slist[1]; }; struct group_filter { uint32_t gf_interface; struct sockaddr_storage gf_group; uint32_t gf_fmode; uint32_t gf_numsrc; struct sockaddr_storage gf_slist[1]; }; # 355 "/usr/include/netinet/in.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/in.h" 1 3 4 # 100 "/usr/include/x86_64-linux-gnu/bits/in.h" 3 4 struct ip_opts { struct in_addr ip_dst; char ip_opts[40]; }; struct ip_mreqn { struct in_addr imr_multiaddr; struct in_addr imr_address; int imr_ifindex; }; struct in_pktinfo { int ipi_ifindex; struct in_addr ipi_spec_dst; struct in_addr ipi_addr; }; # 356 "/usr/include/netinet/in.h" 2 3 4 # 364 "/usr/include/netinet/in.h" 3 4 extern uint32_t ntohl (uint32_t __netlong) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); extern uint16_t ntohs (uint16_t __netshort) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); extern uint32_t htonl (uint32_t __hostlong) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); extern uint16_t htons (uint16_t __hostshort) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); # 1 "/usr/include/x86_64-linux-gnu/bits/byteswap.h" 1 3 4 # 376 "/usr/include/netinet/in.h" 2 3 4 # 491 "/usr/include/netinet/in.h" 3 4 extern int bindresvport (int __sockfd, struct sockaddr_in *__sock_in) __attribute__ ((__nothrow__ , __leaf__)); extern int bindresvport6 (int __sockfd, struct sockaddr_in6 *__sock_in) __attribute__ ((__nothrow__ , __leaf__)); # 618 "/usr/include/netinet/in.h" 3 4 # 28 "/usr/include/netdb.h" 2 3 4 # 1 "/usr/include/rpc/netdb.h" 1 3 4 # 42 "/usr/include/rpc/netdb.h" 3 4 # 1 "/usr/lib/gcc/x86_64-linux-gnu/4.7/include/stddef.h" 1 3 4 # 43 "/usr/include/rpc/netdb.h" 2 3 4 struct rpcent { char *r_name; char **r_aliases; int r_number; }; extern void setrpcent (int __stayopen) __attribute__ ((__nothrow__ , __leaf__)); extern void endrpcent (void) __attribute__ ((__nothrow__ , __leaf__)); extern struct rpcent *getrpcbyname (const char *__name) __attribute__ ((__nothrow__ , __leaf__)); extern struct rpcent *getrpcbynumber (int __number) __attribute__ ((__nothrow__ , __leaf__)); extern struct rpcent *getrpcent (void) __attribute__ ((__nothrow__ , __leaf__)); extern int getrpcbyname_r (const char *__name, struct rpcent *__result_buf, char *__buffer, size_t __buflen, struct rpcent **__result) __attribute__ ((__nothrow__ , __leaf__)); extern int getrpcbynumber_r (int __number, struct rpcent *__result_buf, char *__buffer, size_t __buflen, struct rpcent **__result) __attribute__ ((__nothrow__ , __leaf__)); extern int getrpcent_r (struct rpcent *__result_buf, char *__buffer, size_t __buflen, struct rpcent **__result) __attribute__ ((__nothrow__ , __leaf__)); # 33 "/usr/include/netdb.h" 2 3 4 # 42 "/usr/include/netdb.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/netdb.h" 1 3 4 # 26 "/usr/include/x86_64-linux-gnu/bits/netdb.h" 3 4 struct netent { char *n_name; char **n_aliases; int n_addrtype; uint32_t n_net; }; # 43 "/usr/include/netdb.h" 2 3 4 # 53 "/usr/include/netdb.h" 3 4 extern int *__h_errno_location (void) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); # 92 "/usr/include/netdb.h" 3 4 extern void herror (const char *__str) __attribute__ ((__nothrow__ , __leaf__)); extern const char *hstrerror (int __err_num) __attribute__ ((__nothrow__ , __leaf__)); struct hostent { char *h_name; char **h_aliases; int h_addrtype; int h_length; char **h_addr_list; }; extern void sethostent (int __stay_open); extern void endhostent (void); extern struct hostent *gethostent (void); extern struct hostent *gethostbyaddr (const void *__addr, __socklen_t __len, int __type); extern struct hostent *gethostbyname (const char *__name); # 155 "/usr/include/netdb.h" 3 4 extern struct hostent *gethostbyname2 (const char *__name, int __af); # 167 "/usr/include/netdb.h" 3 4 extern int gethostent_r (struct hostent *__restrict __result_buf, char *__restrict __buf, size_t __buflen, struct hostent **__restrict __result, int *__restrict __h_errnop); extern int gethostbyaddr_r (const void *__restrict __addr, __socklen_t __len, int __type, struct hostent *__restrict __result_buf, char *__restrict __buf, size_t __buflen, struct hostent **__restrict __result, int *__restrict __h_errnop); extern int gethostbyname_r (const char *__restrict __name, struct hostent *__restrict __result_buf, char *__restrict __buf, size_t __buflen, struct hostent **__restrict __result, int *__restrict __h_errnop); extern int gethostbyname2_r (const char *__restrict __name, int __af, struct hostent *__restrict __result_buf, char *__restrict __buf, size_t __buflen, struct hostent **__restrict __result, int *__restrict __h_errnop); # 198 "/usr/include/netdb.h" 3 4 extern void setnetent (int __stay_open); extern void endnetent (void); extern struct netent *getnetent (void); extern struct netent *getnetbyaddr (uint32_t __net, int __type); extern struct netent *getnetbyname (const char *__name); # 237 "/usr/include/netdb.h" 3 4 extern int getnetent_r (struct netent *__restrict __result_buf, char *__restrict __buf, size_t __buflen, struct netent **__restrict __result, int *__restrict __h_errnop); extern int getnetbyaddr_r (uint32_t __net, int __type, struct netent *__restrict __result_buf, char *__restrict __buf, size_t __buflen, struct netent **__restrict __result, int *__restrict __h_errnop); extern int getnetbyname_r (const char *__restrict __name, struct netent *__restrict __result_buf, char *__restrict __buf, size_t __buflen, struct netent **__restrict __result, int *__restrict __h_errnop); struct servent { char *s_name; char **s_aliases; int s_port; char *s_proto; }; extern void setservent (int __stay_open); extern void endservent (void); extern struct servent *getservent (void); extern struct servent *getservbyname (const char *__name, const char *__proto); extern struct servent *getservbyport (int __port, const char *__proto); # 308 "/usr/include/netdb.h" 3 4 extern int getservent_r (struct servent *__restrict __result_buf, char *__restrict __buf, size_t __buflen, struct servent **__restrict __result); extern int getservbyname_r (const char *__restrict __name, const char *__restrict __proto, struct servent *__restrict __result_buf, char *__restrict __buf, size_t __buflen, struct servent **__restrict __result); extern int getservbyport_r (int __port, const char *__restrict __proto, struct servent *__restrict __result_buf, char *__restrict __buf, size_t __buflen, struct servent **__restrict __result); struct protoent { char *p_name; char **p_aliases; int p_proto; }; extern void setprotoent (int __stay_open); extern void endprotoent (void); extern struct protoent *getprotoent (void); extern struct protoent *getprotobyname (const char *__name); extern struct protoent *getprotobynumber (int __proto); # 374 "/usr/include/netdb.h" 3 4 extern int getprotoent_r (struct protoent *__restrict __result_buf, char *__restrict __buf, size_t __buflen, struct protoent **__restrict __result); extern int getprotobyname_r (const char *__restrict __name, struct protoent *__restrict __result_buf, char *__restrict __buf, size_t __buflen, struct protoent **__restrict __result); extern int getprotobynumber_r (int __proto, struct protoent *__restrict __result_buf, char *__restrict __buf, size_t __buflen, struct protoent **__restrict __result); # 395 "/usr/include/netdb.h" 3 4 extern int setnetgrent (const char *__netgroup); extern void endnetgrent (void); # 412 "/usr/include/netdb.h" 3 4 extern int getnetgrent (char **__restrict __hostp, char **__restrict __userp, char **__restrict __domainp); # 423 "/usr/include/netdb.h" 3 4 extern int innetgr (const char *__netgroup, const char *__host, const char *__user, const char *__domain); extern int getnetgrent_r (char **__restrict __hostp, char **__restrict __userp, char **__restrict __domainp, char *__restrict __buffer, size_t __buflen); # 451 "/usr/include/netdb.h" 3 4 extern int rcmd (char **__restrict __ahost, unsigned short int __rport, const char *__restrict __locuser, const char *__restrict __remuser, const char *__restrict __cmd, int *__restrict __fd2p); # 463 "/usr/include/netdb.h" 3 4 extern int rcmd_af (char **__restrict __ahost, unsigned short int __rport, const char *__restrict __locuser, const char *__restrict __remuser, const char *__restrict __cmd, int *__restrict __fd2p, sa_family_t __af); # 479 "/usr/include/netdb.h" 3 4 extern int rexec (char **__restrict __ahost, int __rport, const char *__restrict __name, const char *__restrict __pass, const char *__restrict __cmd, int *__restrict __fd2p); # 491 "/usr/include/netdb.h" 3 4 extern int rexec_af (char **__restrict __ahost, int __rport, const char *__restrict __name, const char *__restrict __pass, const char *__restrict __cmd, int *__restrict __fd2p, sa_family_t __af); # 505 "/usr/include/netdb.h" 3 4 extern int ruserok (const char *__rhost, int __suser, const char *__remuser, const char *__locuser); # 515 "/usr/include/netdb.h" 3 4 extern int ruserok_af (const char *__rhost, int __suser, const char *__remuser, const char *__locuser, sa_family_t __af); # 528 "/usr/include/netdb.h" 3 4 extern int iruserok (uint32_t __raddr, int __suser, const char *__remuser, const char *__locuser); # 539 "/usr/include/netdb.h" 3 4 extern int iruserok_af (const void *__raddr, int __suser, const char *__remuser, const char *__locuser, sa_family_t __af); # 551 "/usr/include/netdb.h" 3 4 extern int rresvport (int *__alport); # 560 "/usr/include/netdb.h" 3 4 extern int rresvport_af (int *__alport, sa_family_t __af); struct addrinfo { int ai_flags; int ai_family; int ai_socktype; int ai_protocol; socklen_t ai_addrlen; struct sockaddr *ai_addr; char *ai_canonname; struct addrinfo *ai_next; }; # 662 "/usr/include/netdb.h" 3 4 extern int getaddrinfo (const char *__restrict __name, const char *__restrict __service, const struct addrinfo *__restrict __req, struct addrinfo **__restrict __pai); extern void freeaddrinfo (struct addrinfo *__ai) __attribute__ ((__nothrow__ , __leaf__)); extern const char *gai_strerror (int __ecode) __attribute__ ((__nothrow__ , __leaf__)); extern int getnameinfo (const struct sockaddr *__restrict __sa, socklen_t __salen, char *__restrict __host, socklen_t __hostlen, char *__restrict __serv, socklen_t __servlen, int __flags); # 713 "/usr/include/netdb.h" 3 4 # 3 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 Defined "HAVE_NETDB_H" to "1" ================================================================================ TEST check from config.headers(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: search.h sh: tau_cc.sh -E -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.headers /tmp/petsc-U9YCMv/config.headers/conftest.c Executing: tau_cc.sh -E -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.headers /tmp/petsc-U9YCMv/config.headers/conftest.c sh: # 1 "/tmp/petsc-U9YCMv/config.headers/conftest.c" # 1 "" # 1 "/tmp/petsc-U9YCMv/config.headers/conftest.c" # 1 "/tmp/petsc-U9YCMv/config.headers/confdefs.h" 1 # 2 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 # 1 "/tmp/petsc-U9YCMv/config.headers/conffix.h" 1 # 3 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 # 1 "/usr/include/search.h" 1 3 4 # 22 "/usr/include/search.h" 3 4 # 1 "/usr/include/features.h" 1 3 4 # 341 "/usr/include/features.h" 3 4 # 1 "/usr/include/stdc-predef.h" 1 3 4 # 30 "/usr/include/stdc-predef.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/predefs.h" 1 3 4 # 31 "/usr/include/stdc-predef.h" 2 3 4 # 342 "/usr/include/features.h" 2 3 4 # 371 "/usr/include/features.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/sys/cdefs.h" 1 3 4 # 385 "/usr/include/x86_64-linux-gnu/sys/cdefs.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/wordsize.h" 1 3 4 # 386 "/usr/include/x86_64-linux-gnu/sys/cdefs.h" 2 3 4 # 372 "/usr/include/features.h" 2 3 4 # 395 "/usr/include/features.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/gnu/stubs.h" 1 3 4 # 10 "/usr/include/x86_64-linux-gnu/gnu/stubs.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/gnu/stubs-64.h" 1 3 4 # 11 "/usr/include/x86_64-linux-gnu/gnu/stubs.h" 2 3 4 # 396 "/usr/include/features.h" 2 3 4 # 23 "/usr/include/search.h" 2 3 4 # 1 "/usr/lib/gcc/x86_64-linux-gnu/4.7/include/stddef.h" 1 3 4 # 213 "/usr/lib/gcc/x86_64-linux-gnu/4.7/include/stddef.h" 3 4 typedef long unsigned int size_t; # 26 "/usr/include/search.h" 2 3 4 # 44 "/usr/include/search.h" 3 4 extern void insque (void *__elem, void *__prev) __attribute__ ((__nothrow__ , __leaf__)); extern void remque (void *__elem) __attribute__ ((__nothrow__ , __leaf__)); typedef int (*__compar_fn_t) (const void *, const void *); typedef enum { FIND, ENTER } ACTION; typedef struct entry { char *key; void *data; } ENTRY; struct _ENTRY; # 87 "/usr/include/search.h" 3 4 extern ENTRY *hsearch (ENTRY __item, ACTION __action) __attribute__ ((__nothrow__ , __leaf__)); extern int hcreate (size_t __nel) __attribute__ ((__nothrow__ , __leaf__)); extern void hdestroy (void) __attribute__ ((__nothrow__ , __leaf__)); # 118 "/usr/include/search.h" 3 4 typedef enum { preorder, postorder, endorder, leaf } VISIT; extern void *tsearch (const void *__key, void **__rootp, __compar_fn_t __compar); extern void *tfind (const void *__key, void *const *__rootp, __compar_fn_t __compar); extern void *tdelete (const void *__restrict __key, void **__restrict __rootp, __compar_fn_t __compar); typedef void (*__action_fn_t) (const void *__nodep, VISIT __value, int __level); extern void twalk (const void *__root, __action_fn_t __action); # 164 "/usr/include/search.h" 3 4 extern void *lfind (const void *__key, const void *__base, size_t *__nmemb, size_t __size, __compar_fn_t __compar); extern void *lsearch (const void *__key, void *__base, size_t *__nmemb, size_t __size, __compar_fn_t __compar); # 3 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 Defined "HAVE_SEARCH_H" to "1" ================================================================================ TEST check from config.headers(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: mathimf.h sh: tau_cc.sh -E -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.headers /tmp/petsc-U9YCMv/config.headers/conftest.c Executing: tau_cc.sh -E -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.headers /tmp/petsc-U9YCMv/config.headers/conftest.c sh: # 1 "/tmp/petsc-U9YCMv/config.headers/conftest.c" # 1 "" # 1 "/tmp/petsc-U9YCMv/config.headers/conftest.c" # 1 "/tmp/petsc-U9YCMv/config.headers/confdefs.h" 1 # 2 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 # 1 "/tmp/petsc-U9YCMv/config.headers/conffix.h" 1 # 3 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 Possible ERROR while running preprocessor: /tmp/petsc-U9YCMv/config.headers/conftest.c:3:21: fatal error: mathimf.h: No such file or directory compilation terminated. make: *** [all] Error 1 ret = 256 error message = {/tmp/petsc-U9YCMv/config.headers/conftest.c:3:21: fatal error: mathimf.h: No such file or directory compilation terminated. make: *** [all] Error 1 } Source: #include "confdefs.h" #include "conffix.h" #include ================================================================================ TEST check from config.headers(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/procfs.h sh: tau_cc.sh -E -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.headers /tmp/petsc-U9YCMv/config.headers/conftest.c Executing: tau_cc.sh -E -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.headers /tmp/petsc-U9YCMv/config.headers/conftest.c sh: # 1 "/tmp/petsc-U9YCMv/config.headers/conftest.c" # 1 "" # 1 "/tmp/petsc-U9YCMv/config.headers/conftest.c" # 1 "/tmp/petsc-U9YCMv/config.headers/confdefs.h" 1 # 2 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 # 1 "/tmp/petsc-U9YCMv/config.headers/conffix.h" 1 # 3 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 # 1 "/usr/include/x86_64-linux-gnu/sys/procfs.h" 1 3 4 # 30 "/usr/include/x86_64-linux-gnu/sys/procfs.h" 3 4 # 1 "/usr/include/features.h" 1 3 4 # 341 "/usr/include/features.h" 3 4 # 1 "/usr/include/stdc-predef.h" 1 3 4 # 30 "/usr/include/stdc-predef.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/predefs.h" 1 3 4 # 31 "/usr/include/stdc-predef.h" 2 3 4 # 342 "/usr/include/features.h" 2 3 4 # 371 "/usr/include/features.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/sys/cdefs.h" 1 3 4 # 385 "/usr/include/x86_64-linux-gnu/sys/cdefs.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/wordsize.h" 1 3 4 # 386 "/usr/include/x86_64-linux-gnu/sys/cdefs.h" 2 3 4 # 372 "/usr/include/features.h" 2 3 4 # 395 "/usr/include/features.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/gnu/stubs.h" 1 3 4 # 10 "/usr/include/x86_64-linux-gnu/gnu/stubs.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/gnu/stubs-64.h" 1 3 4 # 11 "/usr/include/x86_64-linux-gnu/gnu/stubs.h" 2 3 4 # 396 "/usr/include/features.h" 2 3 4 # 31 "/usr/include/x86_64-linux-gnu/sys/procfs.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/sys/time.h" 1 3 4 # 24 "/usr/include/x86_64-linux-gnu/sys/time.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/types.h" 1 3 4 # 27 "/usr/include/x86_64-linux-gnu/bits/types.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/wordsize.h" 1 3 4 # 28 "/usr/include/x86_64-linux-gnu/bits/types.h" 2 3 4 typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; # 130 "/usr/include/x86_64-linux-gnu/bits/types.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/typesizes.h" 1 3 4 # 131 "/usr/include/x86_64-linux-gnu/bits/types.h" 2 3 4 typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned long int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef long int __suseconds_t; typedef int __daddr_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __fsword_t; typedef long int __ssize_t; typedef long int __syscall_slong_t; typedef unsigned long int __syscall_ulong_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; # 25 "/usr/include/x86_64-linux-gnu/sys/time.h" 2 3 4 # 1 "/usr/include/time.h" 1 3 4 # 73 "/usr/include/time.h" 3 4 typedef __time_t time_t; # 27 "/usr/include/x86_64-linux-gnu/sys/time.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/time.h" 1 3 4 # 30 "/usr/include/x86_64-linux-gnu/bits/time.h" 3 4 struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; # 29 "/usr/include/x86_64-linux-gnu/sys/time.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/sys/select.h" 1 3 4 # 30 "/usr/include/x86_64-linux-gnu/sys/select.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/select.h" 1 3 4 # 22 "/usr/include/x86_64-linux-gnu/bits/select.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/wordsize.h" 1 3 4 # 23 "/usr/include/x86_64-linux-gnu/bits/select.h" 2 3 4 # 31 "/usr/include/x86_64-linux-gnu/sys/select.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/sigset.h" 1 3 4 # 23 "/usr/include/x86_64-linux-gnu/bits/sigset.h" 3 4 typedef int __sig_atomic_t; typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; # 34 "/usr/include/x86_64-linux-gnu/sys/select.h" 2 3 4 typedef __sigset_t sigset_t; # 1 "/usr/include/time.h" 1 3 4 # 120 "/usr/include/time.h" 3 4 struct timespec { __time_t tv_sec; __syscall_slong_t tv_nsec; }; # 44 "/usr/include/x86_64-linux-gnu/sys/select.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/time.h" 1 3 4 # 46 "/usr/include/x86_64-linux-gnu/sys/select.h" 2 3 4 typedef __suseconds_t suseconds_t; typedef long int __fd_mask; # 64 "/usr/include/x86_64-linux-gnu/sys/select.h" 3 4 typedef struct { __fd_mask __fds_bits[1024 / (8 * (int) sizeof (__fd_mask))]; } fd_set; typedef __fd_mask fd_mask; # 96 "/usr/include/x86_64-linux-gnu/sys/select.h" 3 4 # 106 "/usr/include/x86_64-linux-gnu/sys/select.h" 3 4 extern int select (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, struct timeval *__restrict __timeout); # 118 "/usr/include/x86_64-linux-gnu/sys/select.h" 3 4 extern int pselect (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, const struct timespec *__restrict __timeout, const __sigset_t *__restrict __sigmask); # 131 "/usr/include/x86_64-linux-gnu/sys/select.h" 3 4 # 31 "/usr/include/x86_64-linux-gnu/sys/time.h" 2 3 4 # 56 "/usr/include/x86_64-linux-gnu/sys/time.h" 3 4 struct timezone { int tz_minuteswest; int tz_dsttime; }; typedef struct timezone *__restrict __timezone_ptr_t; # 72 "/usr/include/x86_64-linux-gnu/sys/time.h" 3 4 extern int gettimeofday (struct timeval *__restrict __tv, __timezone_ptr_t __tz) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern int settimeofday (const struct timeval *__tv, const struct timezone *__tz) __attribute__ ((__nothrow__ , __leaf__)); extern int adjtime (const struct timeval *__delta, struct timeval *__olddelta) __attribute__ ((__nothrow__ , __leaf__)); enum __itimer_which { ITIMER_REAL = 0, ITIMER_VIRTUAL = 1, ITIMER_PROF = 2 }; struct itimerval { struct timeval it_interval; struct timeval it_value; }; typedef int __itimer_which_t; extern int getitimer (__itimer_which_t __which, struct itimerval *__value) __attribute__ ((__nothrow__ , __leaf__)); extern int setitimer (__itimer_which_t __which, const struct itimerval *__restrict __new, struct itimerval *__restrict __old) __attribute__ ((__nothrow__ , __leaf__)); extern int utimes (const char *__file, const struct timeval __tvp[2]) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern int lutimes (const char *__file, const struct timeval __tvp[2]) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern int futimes (int __fd, const struct timeval __tvp[2]) __attribute__ ((__nothrow__ , __leaf__)); # 190 "/usr/include/x86_64-linux-gnu/sys/time.h" 3 4 # 32 "/usr/include/x86_64-linux-gnu/sys/procfs.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/sys/types.h" 1 3 4 # 27 "/usr/include/x86_64-linux-gnu/sys/types.h" 3 4 typedef __u_char u_char; typedef __u_short u_short; typedef __u_int u_int; typedef __u_long u_long; typedef __quad_t quad_t; typedef __u_quad_t u_quad_t; typedef __fsid_t fsid_t; typedef __loff_t loff_t; typedef __ino_t ino_t; # 60 "/usr/include/x86_64-linux-gnu/sys/types.h" 3 4 typedef __dev_t dev_t; typedef __gid_t gid_t; typedef __mode_t mode_t; typedef __nlink_t nlink_t; typedef __uid_t uid_t; typedef __off_t off_t; # 98 "/usr/include/x86_64-linux-gnu/sys/types.h" 3 4 typedef __pid_t pid_t; typedef __id_t id_t; typedef __ssize_t ssize_t; typedef __daddr_t daddr_t; typedef __caddr_t caddr_t; typedef __key_t key_t; # 132 "/usr/include/x86_64-linux-gnu/sys/types.h" 3 4 # 1 "/usr/include/time.h" 1 3 4 # 57 "/usr/include/time.h" 3 4 typedef __clock_t clock_t; # 91 "/usr/include/time.h" 3 4 typedef __clockid_t clockid_t; # 103 "/usr/include/time.h" 3 4 typedef __timer_t timer_t; # 133 "/usr/include/x86_64-linux-gnu/sys/types.h" 2 3 4 # 146 "/usr/include/x86_64-linux-gnu/sys/types.h" 3 4 # 1 "/usr/lib/gcc/x86_64-linux-gnu/4.7/include/stddef.h" 1 3 4 # 213 "/usr/lib/gcc/x86_64-linux-gnu/4.7/include/stddef.h" 3 4 typedef long unsigned int size_t; # 147 "/usr/include/x86_64-linux-gnu/sys/types.h" 2 3 4 typedef unsigned long int ulong; typedef unsigned short int ushort; typedef unsigned int uint; # 194 "/usr/include/x86_64-linux-gnu/sys/types.h" 3 4 typedef int int8_t __attribute__ ((__mode__ (__QI__))); typedef int int16_t __attribute__ ((__mode__ (__HI__))); typedef int int32_t __attribute__ ((__mode__ (__SI__))); typedef int int64_t __attribute__ ((__mode__ (__DI__))); typedef unsigned int u_int8_t __attribute__ ((__mode__ (__QI__))); typedef unsigned int u_int16_t __attribute__ ((__mode__ (__HI__))); typedef unsigned int u_int32_t __attribute__ ((__mode__ (__SI__))); typedef unsigned int u_int64_t __attribute__ ((__mode__ (__DI__))); typedef int register_t __attribute__ ((__mode__ (__word__))); # 216 "/usr/include/x86_64-linux-gnu/sys/types.h" 3 4 # 1 "/usr/include/endian.h" 1 3 4 # 36 "/usr/include/endian.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/endian.h" 1 3 4 # 37 "/usr/include/endian.h" 2 3 4 # 60 "/usr/include/endian.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/byteswap.h" 1 3 4 # 28 "/usr/include/x86_64-linux-gnu/bits/byteswap.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/wordsize.h" 1 3 4 # 29 "/usr/include/x86_64-linux-gnu/bits/byteswap.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/byteswap-16.h" 1 3 4 # 36 "/usr/include/x86_64-linux-gnu/bits/byteswap.h" 2 3 4 # 44 "/usr/include/x86_64-linux-gnu/bits/byteswap.h" 3 4 static __inline unsigned int __bswap_32 (unsigned int __bsx) { return __builtin_bswap32 (__bsx); } # 108 "/usr/include/x86_64-linux-gnu/bits/byteswap.h" 3 4 static __inline __uint64_t __bswap_64 (__uint64_t __bsx) { return __builtin_bswap64 (__bsx); } # 61 "/usr/include/endian.h" 2 3 4 # 217 "/usr/include/x86_64-linux-gnu/sys/types.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/sys/sysmacros.h" 1 3 4 # 29 "/usr/include/x86_64-linux-gnu/sys/sysmacros.h" 3 4 __extension__ extern unsigned int gnu_dev_major (unsigned long long int __dev) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); __extension__ extern unsigned int gnu_dev_minor (unsigned long long int __dev) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); __extension__ extern unsigned long long int gnu_dev_makedev (unsigned int __major, unsigned int __minor) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); # 63 "/usr/include/x86_64-linux-gnu/sys/sysmacros.h" 3 4 # 223 "/usr/include/x86_64-linux-gnu/sys/types.h" 2 3 4 typedef __blksize_t blksize_t; typedef __blkcnt_t blkcnt_t; typedef __fsblkcnt_t fsblkcnt_t; typedef __fsfilcnt_t fsfilcnt_t; # 270 "/usr/include/x86_64-linux-gnu/sys/types.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/pthreadtypes.h" 1 3 4 # 21 "/usr/include/x86_64-linux-gnu/bits/pthreadtypes.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/wordsize.h" 1 3 4 # 22 "/usr/include/x86_64-linux-gnu/bits/pthreadtypes.h" 2 3 4 # 60 "/usr/include/x86_64-linux-gnu/bits/pthreadtypes.h" 3 4 typedef unsigned long int pthread_t; union pthread_attr_t { char __size[56]; long int __align; }; typedef union pthread_attr_t pthread_attr_t; typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; # 90 "/usr/include/x86_64-linux-gnu/bits/pthreadtypes.h" 3 4 typedef union { struct __pthread_mutex_s { int __lock; unsigned int __count; int __owner; unsigned int __nusers; int __kind; int __spins; __pthread_list_t __list; # 115 "/usr/include/x86_64-linux-gnu/bits/pthreadtypes.h" 3 4 } __data; char __size[40]; long int __align; } pthread_mutex_t; typedef union { char __size[4]; int __align; } pthread_mutexattr_t; typedef union { struct { int __lock; unsigned int __futex; __extension__ unsigned long long int __total_seq; __extension__ unsigned long long int __wakeup_seq; __extension__ unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; __extension__ long long int __align; } pthread_cond_t; typedef union { char __size[4]; int __align; } pthread_condattr_t; typedef unsigned int pthread_key_t; typedef int pthread_once_t; typedef union { struct { int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; unsigned int __flags; } __data; # 202 "/usr/include/x86_64-linux-gnu/bits/pthreadtypes.h" 3 4 char __size[56]; long int __align; } pthread_rwlock_t; typedef union { char __size[8]; long int __align; } pthread_rwlockattr_t; typedef volatile int pthread_spinlock_t; typedef union { char __size[32]; long int __align; } pthread_barrier_t; typedef union { char __size[4]; int __align; } pthread_barrierattr_t; # 271 "/usr/include/x86_64-linux-gnu/sys/types.h" 2 3 4 # 33 "/usr/include/x86_64-linux-gnu/sys/procfs.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/sys/user.h" 1 3 4 # 25 "/usr/include/x86_64-linux-gnu/sys/user.h" 3 4 # 1 "/usr/include/unistd.h" 1 3 4 # 27 "/usr/include/unistd.h" 3 4 # 202 "/usr/include/unistd.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/posix_opt.h" 1 3 4 # 203 "/usr/include/unistd.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/environments.h" 1 3 4 # 22 "/usr/include/x86_64-linux-gnu/bits/environments.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/wordsize.h" 1 3 4 # 23 "/usr/include/x86_64-linux-gnu/bits/environments.h" 2 3 4 # 207 "/usr/include/unistd.h" 2 3 4 # 226 "/usr/include/unistd.h" 3 4 # 1 "/usr/lib/gcc/x86_64-linux-gnu/4.7/include/stddef.h" 1 3 4 # 227 "/usr/include/unistd.h" 2 3 4 # 255 "/usr/include/unistd.h" 3 4 typedef __useconds_t useconds_t; # 267 "/usr/include/unistd.h" 3 4 typedef __intptr_t intptr_t; typedef __socklen_t socklen_t; # 287 "/usr/include/unistd.h" 3 4 extern int access (const char *__name, int __type) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); # 304 "/usr/include/unistd.h" 3 4 extern int faccessat (int __fd, const char *__file, int __type, int __flag) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (2))) ; # 334 "/usr/include/unistd.h" 3 4 extern __off_t lseek (int __fd, __off_t __offset, int __whence) __attribute__ ((__nothrow__ , __leaf__)); # 353 "/usr/include/unistd.h" 3 4 extern int close (int __fd); extern ssize_t read (int __fd, void *__buf, size_t __nbytes) ; extern ssize_t write (int __fd, const void *__buf, size_t __n) ; # 376 "/usr/include/unistd.h" 3 4 extern ssize_t pread (int __fd, void *__buf, size_t __nbytes, __off_t __offset) ; extern ssize_t pwrite (int __fd, const void *__buf, size_t __n, __off_t __offset) ; # 417 "/usr/include/unistd.h" 3 4 extern int pipe (int __pipedes[2]) __attribute__ ((__nothrow__ , __leaf__)) ; # 432 "/usr/include/unistd.h" 3 4 extern unsigned int alarm (unsigned int __seconds) __attribute__ ((__nothrow__ , __leaf__)); # 444 "/usr/include/unistd.h" 3 4 extern unsigned int sleep (unsigned int __seconds); extern __useconds_t ualarm (__useconds_t __value, __useconds_t __interval) __attribute__ ((__nothrow__ , __leaf__)); extern int usleep (__useconds_t __useconds); # 469 "/usr/include/unistd.h" 3 4 extern int pause (void); extern int chown (const char *__file, __uid_t __owner, __gid_t __group) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))) ; extern int fchown (int __fd, __uid_t __owner, __gid_t __group) __attribute__ ((__nothrow__ , __leaf__)) ; extern int lchown (const char *__file, __uid_t __owner, __gid_t __group) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))) ; extern int fchownat (int __fd, const char *__file, __uid_t __owner, __gid_t __group, int __flag) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (2))) ; extern int chdir (const char *__path) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))) ; extern int fchdir (int __fd) __attribute__ ((__nothrow__ , __leaf__)) ; # 511 "/usr/include/unistd.h" 3 4 extern char *getcwd (char *__buf, size_t __size) __attribute__ ((__nothrow__ , __leaf__)) ; # 525 "/usr/include/unistd.h" 3 4 extern char *getwd (char *__buf) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))) __attribute__ ((__deprecated__)) ; extern int dup (int __fd) __attribute__ ((__nothrow__ , __leaf__)) ; extern int dup2 (int __fd, int __fd2) __attribute__ ((__nothrow__ , __leaf__)); # 543 "/usr/include/unistd.h" 3 4 extern char **__environ; extern int execve (const char *__path, char *const __argv[], char *const __envp[]) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))); extern int fexecve (int __fd, char *const __argv[], char *const __envp[]) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (2))); extern int execv (const char *__path, char *const __argv[]) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))); extern int execle (const char *__path, const char *__arg, ...) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))); extern int execl (const char *__path, const char *__arg, ...) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))); extern int execvp (const char *__file, char *const __argv[]) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))); extern int execlp (const char *__file, const char *__arg, ...) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))); # 598 "/usr/include/unistd.h" 3 4 extern int nice (int __inc) __attribute__ ((__nothrow__ , __leaf__)) ; extern void _exit (int __status) __attribute__ ((__noreturn__)); # 1 "/usr/include/x86_64-linux-gnu/bits/confname.h" 1 3 4 # 25 "/usr/include/x86_64-linux-gnu/bits/confname.h" 3 4 enum { _PC_LINK_MAX, _PC_MAX_CANON, _PC_MAX_INPUT, _PC_NAME_MAX, _PC_PATH_MAX, _PC_PIPE_BUF, _PC_CHOWN_RESTRICTED, _PC_NO_TRUNC, _PC_VDISABLE, _PC_SYNC_IO, _PC_ASYNC_IO, _PC_PRIO_IO, _PC_SOCK_MAXBUF, _PC_FILESIZEBITS, _PC_REC_INCR_XFER_SIZE, _PC_REC_MAX_XFER_SIZE, _PC_REC_MIN_XFER_SIZE, _PC_REC_XFER_ALIGN, _PC_ALLOC_SIZE_MIN, _PC_SYMLINK_MAX, _PC_2_SYMLINKS }; enum { _SC_ARG_MAX, _SC_CHILD_MAX, _SC_CLK_TCK, _SC_NGROUPS_MAX, _SC_OPEN_MAX, _SC_STREAM_MAX, _SC_TZNAME_MAX, _SC_JOB_CONTROL, _SC_SAVED_IDS, _SC_REALTIME_SIGNALS, _SC_PRIORITY_SCHEDULING, _SC_TIMERS, _SC_ASYNCHRONOUS_IO, _SC_PRIORITIZED_IO, _SC_SYNCHRONIZED_IO, _SC_FSYNC, _SC_MAPPED_FILES, _SC_MEMLOCK, _SC_MEMLOCK_RANGE, _SC_MEMORY_PROTECTION, _SC_MESSAGE_PASSING, _SC_SEMAPHORES, _SC_SHARED_MEMORY_OBJECTS, _SC_AIO_LISTIO_MAX, _SC_AIO_MAX, _SC_AIO_PRIO_DELTA_MAX, _SC_DELAYTIMER_MAX, _SC_MQ_OPEN_MAX, _SC_MQ_PRIO_MAX, _SC_VERSION, _SC_PAGESIZE, _SC_RTSIG_MAX, _SC_SEM_NSEMS_MAX, _SC_SEM_VALUE_MAX, _SC_SIGQUEUE_MAX, _SC_TIMER_MAX, _SC_BC_BASE_MAX, _SC_BC_DIM_MAX, _SC_BC_SCALE_MAX, _SC_BC_STRING_MAX, _SC_COLL_WEIGHTS_MAX, _SC_EQUIV_CLASS_MAX, _SC_EXPR_NEST_MAX, _SC_LINE_MAX, _SC_RE_DUP_MAX, _SC_CHARCLASS_NAME_MAX, _SC_2_VERSION, _SC_2_C_BIND, _SC_2_C_DEV, _SC_2_FORT_DEV, _SC_2_FORT_RUN, _SC_2_SW_DEV, _SC_2_LOCALEDEF, _SC_PII, _SC_PII_XTI, _SC_PII_SOCKET, _SC_PII_INTERNET, _SC_PII_OSI, _SC_POLL, _SC_SELECT, _SC_UIO_MAXIOV, _SC_IOV_MAX = _SC_UIO_MAXIOV, _SC_PII_INTERNET_STREAM, _SC_PII_INTERNET_DGRAM, _SC_PII_OSI_COTS, _SC_PII_OSI_CLTS, _SC_PII_OSI_M, _SC_T_IOV_MAX, _SC_THREADS, _SC_THREAD_SAFE_FUNCTIONS, _SC_GETGR_R_SIZE_MAX, _SC_GETPW_R_SIZE_MAX, _SC_LOGIN_NAME_MAX, _SC_TTY_NAME_MAX, _SC_THREAD_DESTRUCTOR_ITERATIONS, _SC_THREAD_KEYS_MAX, _SC_THREAD_STACK_MIN, _SC_THREAD_THREADS_MAX, _SC_THREAD_ATTR_STACKADDR, _SC_THREAD_ATTR_STACKSIZE, _SC_THREAD_PRIORITY_SCHEDULING, _SC_THREAD_PRIO_INHERIT, _SC_THREAD_PRIO_PROTECT, _SC_THREAD_PROCESS_SHARED, _SC_NPROCESSORS_CONF, _SC_NPROCESSORS_ONLN, _SC_PHYS_PAGES, _SC_AVPHYS_PAGES, _SC_ATEXIT_MAX, _SC_PASS_MAX, _SC_XOPEN_VERSION, _SC_XOPEN_XCU_VERSION, _SC_XOPEN_UNIX, _SC_XOPEN_CRYPT, _SC_XOPEN_ENH_I18N, _SC_XOPEN_SHM, _SC_2_CHAR_TERM, _SC_2_C_VERSION, _SC_2_UPE, _SC_XOPEN_XPG2, _SC_XOPEN_XPG3, _SC_XOPEN_XPG4, _SC_CHAR_BIT, _SC_CHAR_MAX, _SC_CHAR_MIN, _SC_INT_MAX, _SC_INT_MIN, _SC_LONG_BIT, _SC_WORD_BIT, _SC_MB_LEN_MAX, _SC_NZERO, _SC_SSIZE_MAX, _SC_SCHAR_MAX, _SC_SCHAR_MIN, _SC_SHRT_MAX, _SC_SHRT_MIN, _SC_UCHAR_MAX, _SC_UINT_MAX, _SC_ULONG_MAX, _SC_USHRT_MAX, _SC_NL_ARGMAX, _SC_NL_LANGMAX, _SC_NL_MSGMAX, _SC_NL_NMAX, _SC_NL_SETMAX, _SC_NL_TEXTMAX, _SC_XBS5_ILP32_OFF32, _SC_XBS5_ILP32_OFFBIG, _SC_XBS5_LP64_OFF64, _SC_XBS5_LPBIG_OFFBIG, _SC_XOPEN_LEGACY, _SC_XOPEN_REALTIME, _SC_XOPEN_REALTIME_THREADS, _SC_ADVISORY_INFO, _SC_BARRIERS, _SC_BASE, _SC_C_LANG_SUPPORT, _SC_C_LANG_SUPPORT_R, _SC_CLOCK_SELECTION, _SC_CPUTIME, _SC_THREAD_CPUTIME, _SC_DEVICE_IO, _SC_DEVICE_SPECIFIC, _SC_DEVICE_SPECIFIC_R, _SC_FD_MGMT, _SC_FIFO, _SC_PIPE, _SC_FILE_ATTRIBUTES, _SC_FILE_LOCKING, _SC_FILE_SYSTEM, _SC_MONOTONIC_CLOCK, _SC_MULTI_PROCESS, _SC_SINGLE_PROCESS, _SC_NETWORKING, _SC_READER_WRITER_LOCKS, _SC_SPIN_LOCKS, _SC_REGEXP, _SC_REGEX_VERSION, _SC_SHELL, _SC_SIGNALS, _SC_SPAWN, _SC_SPORADIC_SERVER, _SC_THREAD_SPORADIC_SERVER, _SC_SYSTEM_DATABASE, _SC_SYSTEM_DATABASE_R, _SC_TIMEOUTS, _SC_TYPED_MEMORY_OBJECTS, _SC_USER_GROUPS, _SC_USER_GROUPS_R, _SC_2_PBS, _SC_2_PBS_ACCOUNTING, _SC_2_PBS_LOCATE, _SC_2_PBS_MESSAGE, _SC_2_PBS_TRACK, _SC_SYMLOOP_MAX, _SC_STREAMS, _SC_2_PBS_CHECKPOINT, _SC_V6_ILP32_OFF32, _SC_V6_ILP32_OFFBIG, _SC_V6_LP64_OFF64, _SC_V6_LPBIG_OFFBIG, _SC_HOST_NAME_MAX, _SC_TRACE, _SC_TRACE_EVENT_FILTER, _SC_TRACE_INHERIT, _SC_TRACE_LOG, _SC_LEVEL1_ICACHE_SIZE, _SC_LEVEL1_ICACHE_ASSOC, _SC_LEVEL1_ICACHE_LINESIZE, _SC_LEVEL1_DCACHE_SIZE, _SC_LEVEL1_DCACHE_ASSOC, _SC_LEVEL1_DCACHE_LINESIZE, _SC_LEVEL2_CACHE_SIZE, _SC_LEVEL2_CACHE_ASSOC, _SC_LEVEL2_CACHE_LINESIZE, _SC_LEVEL3_CACHE_SIZE, _SC_LEVEL3_CACHE_ASSOC, _SC_LEVEL3_CACHE_LINESIZE, _SC_LEVEL4_CACHE_SIZE, _SC_LEVEL4_CACHE_ASSOC, _SC_LEVEL4_CACHE_LINESIZE, _SC_IPV6 = _SC_LEVEL1_ICACHE_SIZE + 50, _SC_RAW_SOCKETS, _SC_V7_ILP32_OFF32, _SC_V7_ILP32_OFFBIG, _SC_V7_LP64_OFF64, _SC_V7_LPBIG_OFFBIG, _SC_SS_REPL_MAX, _SC_TRACE_EVENT_NAME_MAX, _SC_TRACE_NAME_MAX, _SC_TRACE_SYS_MAX, _SC_TRACE_USER_EVENT_MAX, _SC_XOPEN_STREAMS, _SC_THREAD_ROBUST_PRIO_INHERIT, _SC_THREAD_ROBUST_PRIO_PROTECT }; enum { _CS_PATH, _CS_V6_WIDTH_RESTRICTED_ENVS, _CS_GNU_LIBC_VERSION, _CS_GNU_LIBPTHREAD_VERSION, _CS_V5_WIDTH_RESTRICTED_ENVS, _CS_V7_WIDTH_RESTRICTED_ENVS, _CS_LFS_CFLAGS = 1000, _CS_LFS_LDFLAGS, _CS_LFS_LIBS, _CS_LFS_LINTFLAGS, _CS_LFS64_CFLAGS, _CS_LFS64_LDFLAGS, _CS_LFS64_LIBS, _CS_LFS64_LINTFLAGS, _CS_XBS5_ILP32_OFF32_CFLAGS = 1100, _CS_XBS5_ILP32_OFF32_LDFLAGS, _CS_XBS5_ILP32_OFF32_LIBS, _CS_XBS5_ILP32_OFF32_LINTFLAGS, _CS_XBS5_ILP32_OFFBIG_CFLAGS, _CS_XBS5_ILP32_OFFBIG_LDFLAGS, _CS_XBS5_ILP32_OFFBIG_LIBS, _CS_XBS5_ILP32_OFFBIG_LINTFLAGS, _CS_XBS5_LP64_OFF64_CFLAGS, _CS_XBS5_LP64_OFF64_LDFLAGS, _CS_XBS5_LP64_OFF64_LIBS, _CS_XBS5_LP64_OFF64_LINTFLAGS, _CS_XBS5_LPBIG_OFFBIG_CFLAGS, _CS_XBS5_LPBIG_OFFBIG_LDFLAGS, _CS_XBS5_LPBIG_OFFBIG_LIBS, _CS_XBS5_LPBIG_OFFBIG_LINTFLAGS, _CS_POSIX_V6_ILP32_OFF32_CFLAGS, _CS_POSIX_V6_ILP32_OFF32_LDFLAGS, _CS_POSIX_V6_ILP32_OFF32_LIBS, _CS_POSIX_V6_ILP32_OFF32_LINTFLAGS, _CS_POSIX_V6_ILP32_OFFBIG_CFLAGS, _CS_POSIX_V6_ILP32_OFFBIG_LDFLAGS, _CS_POSIX_V6_ILP32_OFFBIG_LIBS, _CS_POSIX_V6_ILP32_OFFBIG_LINTFLAGS, _CS_POSIX_V6_LP64_OFF64_CFLAGS, _CS_POSIX_V6_LP64_OFF64_LDFLAGS, _CS_POSIX_V6_LP64_OFF64_LIBS, _CS_POSIX_V6_LP64_OFF64_LINTFLAGS, _CS_POSIX_V6_LPBIG_OFFBIG_CFLAGS, _CS_POSIX_V6_LPBIG_OFFBIG_LDFLAGS, _CS_POSIX_V6_LPBIG_OFFBIG_LIBS, _CS_POSIX_V6_LPBIG_OFFBIG_LINTFLAGS, _CS_POSIX_V7_ILP32_OFF32_CFLAGS, _CS_POSIX_V7_ILP32_OFF32_LDFLAGS, _CS_POSIX_V7_ILP32_OFF32_LIBS, _CS_POSIX_V7_ILP32_OFF32_LINTFLAGS, _CS_POSIX_V7_ILP32_OFFBIG_CFLAGS, _CS_POSIX_V7_ILP32_OFFBIG_LDFLAGS, _CS_POSIX_V7_ILP32_OFFBIG_LIBS, _CS_POSIX_V7_ILP32_OFFBIG_LINTFLAGS, _CS_POSIX_V7_LP64_OFF64_CFLAGS, _CS_POSIX_V7_LP64_OFF64_LDFLAGS, _CS_POSIX_V7_LP64_OFF64_LIBS, _CS_POSIX_V7_LP64_OFF64_LINTFLAGS, _CS_POSIX_V7_LPBIG_OFFBIG_CFLAGS, _CS_POSIX_V7_LPBIG_OFFBIG_LDFLAGS, _CS_POSIX_V7_LPBIG_OFFBIG_LIBS, _CS_POSIX_V7_LPBIG_OFFBIG_LINTFLAGS, _CS_V6_ENV, _CS_V7_ENV }; # 610 "/usr/include/unistd.h" 2 3 4 extern long int pathconf (const char *__path, int __name) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern long int fpathconf (int __fd, int __name) __attribute__ ((__nothrow__ , __leaf__)); extern long int sysconf (int __name) __attribute__ ((__nothrow__ , __leaf__)); extern size_t confstr (int __name, char *__buf, size_t __len) __attribute__ ((__nothrow__ , __leaf__)); extern __pid_t getpid (void) __attribute__ ((__nothrow__ , __leaf__)); extern __pid_t getppid (void) __attribute__ ((__nothrow__ , __leaf__)); extern __pid_t getpgrp (void) __attribute__ ((__nothrow__ , __leaf__)); # 646 "/usr/include/unistd.h" 3 4 extern __pid_t __getpgid (__pid_t __pid) __attribute__ ((__nothrow__ , __leaf__)); extern __pid_t getpgid (__pid_t __pid) __attribute__ ((__nothrow__ , __leaf__)); extern int setpgid (__pid_t __pid, __pid_t __pgid) __attribute__ ((__nothrow__ , __leaf__)); # 672 "/usr/include/unistd.h" 3 4 extern int setpgrp (void) __attribute__ ((__nothrow__ , __leaf__)); # 689 "/usr/include/unistd.h" 3 4 extern __pid_t setsid (void) __attribute__ ((__nothrow__ , __leaf__)); extern __pid_t getsid (__pid_t __pid) __attribute__ ((__nothrow__ , __leaf__)); extern __uid_t getuid (void) __attribute__ ((__nothrow__ , __leaf__)); extern __uid_t geteuid (void) __attribute__ ((__nothrow__ , __leaf__)); extern __gid_t getgid (void) __attribute__ ((__nothrow__ , __leaf__)); extern __gid_t getegid (void) __attribute__ ((__nothrow__ , __leaf__)); extern int getgroups (int __size, __gid_t __list[]) __attribute__ ((__nothrow__ , __leaf__)) ; # 722 "/usr/include/unistd.h" 3 4 extern int setuid (__uid_t __uid) __attribute__ ((__nothrow__ , __leaf__)) ; extern int setreuid (__uid_t __ruid, __uid_t __euid) __attribute__ ((__nothrow__ , __leaf__)) ; extern int seteuid (__uid_t __uid) __attribute__ ((__nothrow__ , __leaf__)) ; extern int setgid (__gid_t __gid) __attribute__ ((__nothrow__ , __leaf__)) ; extern int setregid (__gid_t __rgid, __gid_t __egid) __attribute__ ((__nothrow__ , __leaf__)) ; extern int setegid (__gid_t __gid) __attribute__ ((__nothrow__ , __leaf__)) ; # 778 "/usr/include/unistd.h" 3 4 extern __pid_t fork (void) __attribute__ ((__nothrow__)); extern __pid_t vfork (void) __attribute__ ((__nothrow__ , __leaf__)); extern char *ttyname (int __fd) __attribute__ ((__nothrow__ , __leaf__)); extern int ttyname_r (int __fd, char *__buf, size_t __buflen) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (2))) ; extern int isatty (int __fd) __attribute__ ((__nothrow__ , __leaf__)); extern int ttyslot (void) __attribute__ ((__nothrow__ , __leaf__)); extern int link (const char *__from, const char *__to) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))) ; extern int linkat (int __fromfd, const char *__from, int __tofd, const char *__to, int __flags) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (2, 4))) ; extern int symlink (const char *__from, const char *__to) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))) ; extern ssize_t readlink (const char *__restrict __path, char *__restrict __buf, size_t __len) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))) ; extern int symlinkat (const char *__from, int __tofd, const char *__to) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 3))) ; extern ssize_t readlinkat (int __fd, const char *__restrict __path, char *__restrict __buf, size_t __len) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (2, 3))) ; extern int unlink (const char *__name) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern int unlinkat (int __fd, const char *__name, int __flag) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (2))); extern int rmdir (const char *__path) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern __pid_t tcgetpgrp (int __fd) __attribute__ ((__nothrow__ , __leaf__)); extern int tcsetpgrp (int __fd, __pid_t __pgrp_id) __attribute__ ((__nothrow__ , __leaf__)); extern char *getlogin (void); extern int getlogin_r (char *__name, size_t __name_len) __attribute__ ((__nonnull__ (1))); extern int setlogin (const char *__name) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); # 893 "/usr/include/unistd.h" 3 4 # 1 "/usr/include/getopt.h" 1 3 4 # 58 "/usr/include/getopt.h" 3 4 extern char *optarg; # 72 "/usr/include/getopt.h" 3 4 extern int optind; extern int opterr; extern int optopt; # 151 "/usr/include/getopt.h" 3 4 extern int getopt (int ___argc, char *const *___argv, const char *__shortopts) __attribute__ ((__nothrow__ , __leaf__)); # 894 "/usr/include/unistd.h" 2 3 4 extern int gethostname (char *__name, size_t __len) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern int sethostname (const char *__name, size_t __len) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))) ; extern int sethostid (long int __id) __attribute__ ((__nothrow__ , __leaf__)) ; extern int getdomainname (char *__name, size_t __len) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))) ; extern int setdomainname (const char *__name, size_t __len) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))) ; extern int vhangup (void) __attribute__ ((__nothrow__ , __leaf__)); extern int revoke (const char *__file) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))) ; extern int profil (unsigned short int *__sample_buffer, size_t __size, size_t __offset, unsigned int __scale) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern int acct (const char *__name) __attribute__ ((__nothrow__ , __leaf__)); extern char *getusershell (void) __attribute__ ((__nothrow__ , __leaf__)); extern void endusershell (void) __attribute__ ((__nothrow__ , __leaf__)); extern void setusershell (void) __attribute__ ((__nothrow__ , __leaf__)); extern int daemon (int __nochdir, int __noclose) __attribute__ ((__nothrow__ , __leaf__)) ; extern int chroot (const char *__path) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))) ; extern char *getpass (const char *__prompt) __attribute__ ((__nonnull__ (1))); extern int fsync (int __fd); # 991 "/usr/include/unistd.h" 3 4 extern long int gethostid (void); extern void sync (void) __attribute__ ((__nothrow__ , __leaf__)); extern int getpagesize (void) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); extern int getdtablesize (void) __attribute__ ((__nothrow__ , __leaf__)); # 1015 "/usr/include/unistd.h" 3 4 extern int truncate (const char *__file, __off_t __length) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))) ; # 1038 "/usr/include/unistd.h" 3 4 extern int ftruncate (int __fd, __off_t __length) __attribute__ ((__nothrow__ , __leaf__)) ; # 1059 "/usr/include/unistd.h" 3 4 extern int brk (void *__addr) __attribute__ ((__nothrow__ , __leaf__)) ; extern void *sbrk (intptr_t __delta) __attribute__ ((__nothrow__ , __leaf__)); # 1080 "/usr/include/unistd.h" 3 4 extern long int syscall (long int __sysno, ...) __attribute__ ((__nothrow__ , __leaf__)); # 1103 "/usr/include/unistd.h" 3 4 extern int lockf (int __fd, int __cmd, __off_t __len) ; # 1134 "/usr/include/unistd.h" 3 4 extern int fdatasync (int __fildes); # 1172 "/usr/include/unistd.h" 3 4 # 26 "/usr/include/x86_64-linux-gnu/sys/user.h" 2 3 4 struct user_fpregs_struct { unsigned short int cwd; unsigned short int swd; unsigned short int ftw; unsigned short int fop; __extension__ unsigned long long int rip; __extension__ unsigned long long int rdp; unsigned int mxcsr; unsigned int mxcr_mask; unsigned int st_space[32]; unsigned int xmm_space[64]; unsigned int padding[24]; }; struct user_regs_struct { __extension__ unsigned long long int r15; __extension__ unsigned long long int r14; __extension__ unsigned long long int r13; __extension__ unsigned long long int r12; __extension__ unsigned long long int rbp; __extension__ unsigned long long int rbx; __extension__ unsigned long long int r11; __extension__ unsigned long long int r10; __extension__ unsigned long long int r9; __extension__ unsigned long long int r8; __extension__ unsigned long long int rax; __extension__ unsigned long long int rcx; __extension__ unsigned long long int rdx; __extension__ unsigned long long int rsi; __extension__ unsigned long long int rdi; __extension__ unsigned long long int orig_rax; __extension__ unsigned long long int rip; __extension__ unsigned long long int cs; __extension__ unsigned long long int eflags; __extension__ unsigned long long int rsp; __extension__ unsigned long long int ss; __extension__ unsigned long long int fs_base; __extension__ unsigned long long int gs_base; __extension__ unsigned long long int ds; __extension__ unsigned long long int es; __extension__ unsigned long long int fs; __extension__ unsigned long long int gs; }; struct user { struct user_regs_struct regs; int u_fpvalid; struct user_fpregs_struct i387; __extension__ unsigned long long int u_tsize; __extension__ unsigned long long int u_dsize; __extension__ unsigned long long int u_ssize; __extension__ unsigned long long int start_code; __extension__ unsigned long long int start_stack; __extension__ long long int signal; int reserved; __extension__ union { struct user_regs_struct* u_ar0; __extension__ unsigned long long int __u_ar0_word; }; __extension__ union { struct user_fpregs_struct* u_fpstate; __extension__ unsigned long long int __u_fpstate_word; }; __extension__ unsigned long long int magic; char u_comm [32]; __extension__ unsigned long long int u_debugreg [8]; }; # 34 "/usr/include/x86_64-linux-gnu/sys/procfs.h" 2 3 4 typedef unsigned long long elf_greg_t; # 49 "/usr/include/x86_64-linux-gnu/sys/procfs.h" 3 4 typedef elf_greg_t elf_gregset_t[(sizeof (struct user_regs_struct) / sizeof(elf_greg_t))]; # 63 "/usr/include/x86_64-linux-gnu/sys/procfs.h" 3 4 typedef struct user_fpregs_struct elf_fpregset_t; struct elf_siginfo { int si_signo; int si_code; int si_errno; }; # 82 "/usr/include/x86_64-linux-gnu/sys/procfs.h" 3 4 struct elf_prstatus { struct elf_siginfo pr_info; short int pr_cursig; unsigned long int pr_sigpend; unsigned long int pr_sighold; __pid_t pr_pid; __pid_t pr_ppid; __pid_t pr_pgrp; __pid_t pr_sid; struct timeval pr_utime; struct timeval pr_stime; struct timeval pr_cutime; struct timeval pr_cstime; elf_gregset_t pr_reg; int pr_fpvalid; }; struct elf_prpsinfo { char pr_state; Defined "HAVE_SYS_PROCFS_H" to "1" ================================================================================ TEST check from config.headers(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/resource.h sh: tau_cc.sh -E -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.headers /tmp/petsc-U9YCMv/config.headers/conftest.c Executing: tau_cc.sh -E -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.headers /tmp/petsc-U9YCMv/config.headers/conftest.c sh: # 1 "/tmp/petsc-U9YCMv/config.headers/conftest.c" # 1 "" # 1 "/tmp/petsc-U9YCMv/config.headers/conftest.c" # 1 "/tmp/petsc-U9YCMv/config.headers/confdefs.h" 1 # 2 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 # 1 "/tmp/petsc-U9YCMv/config.headers/conffix.h" 1 # 3 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 # 1 "/usr/include/x86_64-linux-gnu/sys/resource.h" 1 3 4 # 22 "/usr/include/x86_64-linux-gnu/sys/resource.h" 3 4 # 1 "/usr/include/features.h" 1 3 4 # 341 "/usr/include/features.h" 3 4 # 1 "/usr/include/stdc-predef.h" 1 3 4 # 30 "/usr/include/stdc-predef.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/predefs.h" 1 3 4 # 31 "/usr/include/stdc-predef.h" 2 3 4 # 342 "/usr/include/features.h" 2 3 4 # 371 "/usr/include/features.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/sys/cdefs.h" 1 3 4 # 385 "/usr/include/x86_64-linux-gnu/sys/cdefs.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/wordsize.h" 1 3 4 # 386 "/usr/include/x86_64-linux-gnu/sys/cdefs.h" 2 3 4 # 372 "/usr/include/features.h" 2 3 4 # 395 "/usr/include/features.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/gnu/stubs.h" 1 3 4 # 10 "/usr/include/x86_64-linux-gnu/gnu/stubs.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/gnu/stubs-64.h" 1 3 4 # 11 "/usr/include/x86_64-linux-gnu/gnu/stubs.h" 2 3 4 # 396 "/usr/include/features.h" 2 3 4 # 23 "/usr/include/x86_64-linux-gnu/sys/resource.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/resource.h" 1 3 4 # 23 "/usr/include/x86_64-linux-gnu/bits/resource.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/types.h" 1 3 4 # 27 "/usr/include/x86_64-linux-gnu/bits/types.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/wordsize.h" 1 3 4 # 28 "/usr/include/x86_64-linux-gnu/bits/types.h" 2 3 4 typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; # 130 "/usr/include/x86_64-linux-gnu/bits/types.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/typesizes.h" 1 3 4 # 131 "/usr/include/x86_64-linux-gnu/bits/types.h" 2 3 4 typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned long int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef long int __suseconds_t; typedef int __daddr_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __fsword_t; typedef long int __ssize_t; typedef long int __syscall_slong_t; typedef unsigned long int __syscall_ulong_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; # 24 "/usr/include/x86_64-linux-gnu/bits/resource.h" 2 3 4 enum __rlimit_resource { RLIMIT_CPU = 0, RLIMIT_FSIZE = 1, RLIMIT_DATA = 2, RLIMIT_STACK = 3, RLIMIT_CORE = 4, __RLIMIT_RSS = 5, RLIMIT_NOFILE = 7, __RLIMIT_OFILE = RLIMIT_NOFILE, RLIMIT_AS = 9, __RLIMIT_NPROC = 6, __RLIMIT_MEMLOCK = 8, __RLIMIT_LOCKS = 10, __RLIMIT_SIGPENDING = 11, __RLIMIT_MSGQUEUE = 12, __RLIMIT_NICE = 13, __RLIMIT_RTPRIO = 14, __RLIMIT_RTTIME = 15, __RLIMIT_NLIMITS = 16, __RLIM_NLIMITS = __RLIMIT_NLIMITS }; # 131 "/usr/include/x86_64-linux-gnu/bits/resource.h" 3 4 typedef __rlim_t rlim_t; struct rlimit { rlim_t rlim_cur; rlim_t rlim_max; }; # 158 "/usr/include/x86_64-linux-gnu/bits/resource.h" 3 4 enum __rusage_who { RUSAGE_SELF = 0, RUSAGE_CHILDREN = -1 # 176 "/usr/include/x86_64-linux-gnu/bits/resource.h" 3 4 }; # 1 "/usr/include/x86_64-linux-gnu/bits/time.h" 1 3 4 # 30 "/usr/include/x86_64-linux-gnu/bits/time.h" 3 4 struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; # 180 "/usr/include/x86_64-linux-gnu/bits/resource.h" 2 3 4 struct rusage { struct timeval ru_utime; struct timeval ru_stime; __extension__ union { long int ru_maxrss; __syscall_slong_t __ru_maxrss_word; }; __extension__ union { long int ru_ixrss; __syscall_slong_t __ru_ixrss_word; }; __extension__ union { long int ru_idrss; __syscall_slong_t __ru_idrss_word; }; __extension__ union { long int ru_isrss; __syscall_slong_t __ru_isrss_word; }; __extension__ union { long int ru_minflt; __syscall_slong_t __ru_minflt_word; }; __extension__ union { long int ru_majflt; __syscall_slong_t __ru_majflt_word; }; __extension__ union { long int ru_nswap; __syscall_slong_t __ru_nswap_word; }; __extension__ union { long int ru_inblock; __syscall_slong_t __ru_inblock_word; }; __extension__ union { long int ru_oublock; __syscall_slong_t __ru_oublock_word; }; __extension__ union { long int ru_msgsnd; __syscall_slong_t __ru_msgsnd_word; }; __extension__ union { long int ru_msgrcv; __syscall_slong_t __ru_msgrcv_word; }; __extension__ union { long int ru_nsignals; __syscall_slong_t __ru_nsignals_word; }; __extension__ union { long int ru_nvcsw; __syscall_slong_t __ru_nvcsw_word; }; __extension__ union { long int ru_nivcsw; __syscall_slong_t __ru_nivcsw_word; }; }; enum __priority_which { PRIO_PROCESS = 0, PRIO_PGRP = 1, PRIO_USER = 2 }; # 328 "/usr/include/x86_64-linux-gnu/bits/resource.h" 3 4 # 26 "/usr/include/x86_64-linux-gnu/sys/resource.h" 2 3 4 typedef __id_t id_t; # 43 "/usr/include/x86_64-linux-gnu/sys/resource.h" 3 4 typedef int __rlimit_resource_t; typedef int __rusage_who_t; typedef int __priority_which_t; extern int getrlimit (__rlimit_resource_t __resource, struct rlimit *__rlimits) __attribute__ ((__nothrow__ , __leaf__)); # 70 "/usr/include/x86_64-linux-gnu/sys/resource.h" 3 4 extern int setrlimit (__rlimit_resource_t __resource, const struct rlimit *__rlimits) __attribute__ ((__nothrow__ , __leaf__)); # 88 "/usr/include/x86_64-linux-gnu/sys/resource.h" 3 4 extern int getrusage (__rusage_who_t __who, struct rusage *__usage) __attribute__ ((__nothrow__ , __leaf__)); extern int getpriority (__priority_which_t __which, id_t __who) __attribute__ ((__nothrow__ , __leaf__)); extern int setpriority (__priority_which_t __which, id_t __who, int __prio) __attribute__ ((__nothrow__ , __leaf__)); # 3 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 Defined "HAVE_SYS_RESOURCE_H" to "1" ================================================================================ TEST check from config.headers(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: unistd.h sh: tau_cc.sh -E -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.headers /tmp/petsc-U9YCMv/config.headers/conftest.c Executing: tau_cc.sh -E -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.headers /tmp/petsc-U9YCMv/config.headers/conftest.c sh: # 1 "/tmp/petsc-U9YCMv/config.headers/conftest.c" # 1 "" # 1 "/tmp/petsc-U9YCMv/config.headers/conftest.c" # 1 "/tmp/petsc-U9YCMv/config.headers/confdefs.h" 1 # 2 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 # 1 "/tmp/petsc-U9YCMv/config.headers/conffix.h" 1 # 3 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 # 1 "/usr/include/unistd.h" 1 3 4 # 25 "/usr/include/unistd.h" 3 4 # 1 "/usr/include/features.h" 1 3 4 # 341 "/usr/include/features.h" 3 4 # 1 "/usr/include/stdc-predef.h" 1 3 4 # 30 "/usr/include/stdc-predef.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/predefs.h" 1 3 4 # 31 "/usr/include/stdc-predef.h" 2 3 4 # 342 "/usr/include/features.h" 2 3 4 # 371 "/usr/include/features.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/sys/cdefs.h" 1 3 4 # 385 "/usr/include/x86_64-linux-gnu/sys/cdefs.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/wordsize.h" 1 3 4 # 386 "/usr/include/x86_64-linux-gnu/sys/cdefs.h" 2 3 4 # 372 "/usr/include/features.h" 2 3 4 # 395 "/usr/include/features.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/gnu/stubs.h" 1 3 4 # 10 "/usr/include/x86_64-linux-gnu/gnu/stubs.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/gnu/stubs-64.h" 1 3 4 # 11 "/usr/include/x86_64-linux-gnu/gnu/stubs.h" 2 3 4 # 396 "/usr/include/features.h" 2 3 4 # 26 "/usr/include/unistd.h" 2 3 4 # 202 "/usr/include/unistd.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/posix_opt.h" 1 3 4 # 203 "/usr/include/unistd.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/environments.h" 1 3 4 # 22 "/usr/include/x86_64-linux-gnu/bits/environments.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/wordsize.h" 1 3 4 # 23 "/usr/include/x86_64-linux-gnu/bits/environments.h" 2 3 4 # 207 "/usr/include/unistd.h" 2 3 4 # 217 "/usr/include/unistd.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/types.h" 1 3 4 # 27 "/usr/include/x86_64-linux-gnu/bits/types.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/wordsize.h" 1 3 4 # 28 "/usr/include/x86_64-linux-gnu/bits/types.h" 2 3 4 typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; # 130 "/usr/include/x86_64-linux-gnu/bits/types.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/typesizes.h" 1 3 4 # 131 "/usr/include/x86_64-linux-gnu/bits/types.h" 2 3 4 typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned long int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef long int __suseconds_t; typedef int __daddr_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __fsword_t; typedef long int __ssize_t; typedef long int __syscall_slong_t; typedef unsigned long int __syscall_ulong_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; # 218 "/usr/include/unistd.h" 2 3 4 typedef __ssize_t ssize_t; # 1 "/usr/lib/gcc/x86_64-linux-gnu/4.7/include/stddef.h" 1 3 4 # 213 "/usr/lib/gcc/x86_64-linux-gnu/4.7/include/stddef.h" 3 4 typedef long unsigned int size_t; # 227 "/usr/include/unistd.h" 2 3 4 typedef __gid_t gid_t; typedef __uid_t uid_t; typedef __off_t off_t; # 255 "/usr/include/unistd.h" 3 4 typedef __useconds_t useconds_t; typedef __pid_t pid_t; typedef __intptr_t intptr_t; typedef __socklen_t socklen_t; # 287 "/usr/include/unistd.h" 3 4 extern int access (const char *__name, int __type) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); # 304 "/usr/include/unistd.h" 3 4 extern int faccessat (int __fd, const char *__file, int __type, int __flag) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (2))) ; # 334 "/usr/include/unistd.h" 3 4 extern __off_t lseek (int __fd, __off_t __offset, int __whence) __attribute__ ((__nothrow__ , __leaf__)); # 353 "/usr/include/unistd.h" 3 4 extern int close (int __fd); extern ssize_t read (int __fd, void *__buf, size_t __nbytes) ; extern ssize_t write (int __fd, const void *__buf, size_t __n) ; # 376 "/usr/include/unistd.h" 3 4 extern ssize_t pread (int __fd, void *__buf, size_t __nbytes, __off_t __offset) ; extern ssize_t pwrite (int __fd, const void *__buf, size_t __n, __off_t __offset) ; # 417 "/usr/include/unistd.h" 3 4 extern int pipe (int __pipedes[2]) __attribute__ ((__nothrow__ , __leaf__)) ; # 432 "/usr/include/unistd.h" 3 4 extern unsigned int alarm (unsigned int __seconds) __attribute__ ((__nothrow__ , __leaf__)); # 444 "/usr/include/unistd.h" 3 4 extern unsigned int sleep (unsigned int __seconds); extern __useconds_t ualarm (__useconds_t __value, __useconds_t __interval) __attribute__ ((__nothrow__ , __leaf__)); extern int usleep (__useconds_t __useconds); # 469 "/usr/include/unistd.h" 3 4 extern int pause (void); extern int chown (const char *__file, __uid_t __owner, __gid_t __group) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))) ; extern int fchown (int __fd, __uid_t __owner, __gid_t __group) __attribute__ ((__nothrow__ , __leaf__)) ; extern int lchown (const char *__file, __uid_t __owner, __gid_t __group) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))) ; extern int fchownat (int __fd, const char *__file, __uid_t __owner, __gid_t __group, int __flag) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (2))) ; extern int chdir (const char *__path) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))) ; extern int fchdir (int __fd) __attribute__ ((__nothrow__ , __leaf__)) ; # 511 "/usr/include/unistd.h" 3 4 extern char *getcwd (char *__buf, size_t __size) __attribute__ ((__nothrow__ , __leaf__)) ; # 525 "/usr/include/unistd.h" 3 4 extern char *getwd (char *__buf) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))) __attribute__ ((__deprecated__)) ; extern int dup (int __fd) __attribute__ ((__nothrow__ , __leaf__)) ; extern int dup2 (int __fd, int __fd2) __attribute__ ((__nothrow__ , __leaf__)); # 543 "/usr/include/unistd.h" 3 4 extern char **__environ; extern int execve (const char *__path, char *const __argv[], char *const __envp[]) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))); extern int fexecve (int __fd, char *const __argv[], char *const __envp[]) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (2))); extern int execv (const char *__path, char *const __argv[]) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))); extern int execle (const char *__path, const char *__arg, ...) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))); extern int execl (const char *__path, const char *__arg, ...) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))); extern int execvp (const char *__file, char *const __argv[]) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))); extern int execlp (const char *__file, const char *__arg, ...) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))); # 598 "/usr/include/unistd.h" 3 4 extern int nice (int __inc) __attribute__ ((__nothrow__ , __leaf__)) ; extern void _exit (int __status) __attribute__ ((__noreturn__)); # 1 "/usr/include/x86_64-linux-gnu/bits/confname.h" 1 3 4 # 25 "/usr/include/x86_64-linux-gnu/bits/confname.h" 3 4 enum { _PC_LINK_MAX, _PC_MAX_CANON, _PC_MAX_INPUT, _PC_NAME_MAX, _PC_PATH_MAX, _PC_PIPE_BUF, _PC_CHOWN_RESTRICTED, _PC_NO_TRUNC, _PC_VDISABLE, _PC_SYNC_IO, _PC_ASYNC_IO, _PC_PRIO_IO, _PC_SOCK_MAXBUF, _PC_FILESIZEBITS, _PC_REC_INCR_XFER_SIZE, _PC_REC_MAX_XFER_SIZE, _PC_REC_MIN_XFER_SIZE, _PC_REC_XFER_ALIGN, _PC_ALLOC_SIZE_MIN, _PC_SYMLINK_MAX, _PC_2_SYMLINKS }; enum { _SC_ARG_MAX, _SC_CHILD_MAX, _SC_CLK_TCK, _SC_NGROUPS_MAX, _SC_OPEN_MAX, _SC_STREAM_MAX, _SC_TZNAME_MAX, _SC_JOB_CONTROL, _SC_SAVED_IDS, _SC_REALTIME_SIGNALS, _SC_PRIORITY_SCHEDULING, _SC_TIMERS, _SC_ASYNCHRONOUS_IO, _SC_PRIORITIZED_IO, _SC_SYNCHRONIZED_IO, _SC_FSYNC, _SC_MAPPED_FILES, _SC_MEMLOCK, _SC_MEMLOCK_RANGE, _SC_MEMORY_PROTECTION, _SC_MESSAGE_PASSING, _SC_SEMAPHORES, _SC_SHARED_MEMORY_OBJECTS, _SC_AIO_LISTIO_MAX, _SC_AIO_MAX, _SC_AIO_PRIO_DELTA_MAX, _SC_DELAYTIMER_MAX, _SC_MQ_OPEN_MAX, _SC_MQ_PRIO_MAX, _SC_VERSION, _SC_PAGESIZE, _SC_RTSIG_MAX, _SC_SEM_NSEMS_MAX, _SC_SEM_VALUE_MAX, _SC_SIGQUEUE_MAX, _SC_TIMER_MAX, _SC_BC_BASE_MAX, _SC_BC_DIM_MAX, _SC_BC_SCALE_MAX, _SC_BC_STRING_MAX, _SC_COLL_WEIGHTS_MAX, _SC_EQUIV_CLASS_MAX, _SC_EXPR_NEST_MAX, _SC_LINE_MAX, _SC_RE_DUP_MAX, _SC_CHARCLASS_NAME_MAX, _SC_2_VERSION, _SC_2_C_BIND, _SC_2_C_DEV, _SC_2_FORT_DEV, _SC_2_FORT_RUN, _SC_2_SW_DEV, _SC_2_LOCALEDEF, _SC_PII, _SC_PII_XTI, _SC_PII_SOCKET, _SC_PII_INTERNET, _SC_PII_OSI, _SC_POLL, _SC_SELECT, _SC_UIO_MAXIOV, _SC_IOV_MAX = _SC_UIO_MAXIOV, _SC_PII_INTERNET_STREAM, _SC_PII_INTERNET_DGRAM, _SC_PII_OSI_COTS, _SC_PII_OSI_CLTS, _SC_PII_OSI_M, _SC_T_IOV_MAX, _SC_THREADS, _SC_THREAD_SAFE_FUNCTIONS, _SC_GETGR_R_SIZE_MAX, _SC_GETPW_R_SIZE_MAX, _SC_LOGIN_NAME_MAX, _SC_TTY_NAME_MAX, _SC_THREAD_DESTRUCTOR_ITERATIONS, _SC_THREAD_KEYS_MAX, _SC_THREAD_STACK_MIN, _SC_THREAD_THREADS_MAX, _SC_THREAD_ATTR_STACKADDR, _SC_THREAD_ATTR_STACKSIZE, _SC_THREAD_PRIORITY_SCHEDULING, _SC_THREAD_PRIO_INHERIT, _SC_THREAD_PRIO_PROTECT, _SC_THREAD_PROCESS_SHARED, _SC_NPROCESSORS_CONF, _SC_NPROCESSORS_ONLN, _SC_PHYS_PAGES, _SC_AVPHYS_PAGES, _SC_ATEXIT_MAX, _SC_PASS_MAX, _SC_XOPEN_VERSION, _SC_XOPEN_XCU_VERSION, _SC_XOPEN_UNIX, _SC_XOPEN_CRYPT, _SC_XOPEN_ENH_I18N, _SC_XOPEN_SHM, _SC_2_CHAR_TERM, _SC_2_C_VERSION, _SC_2_UPE, _SC_XOPEN_XPG2, _SC_XOPEN_XPG3, _SC_XOPEN_XPG4, _SC_CHAR_BIT, _SC_CHAR_MAX, _SC_CHAR_MIN, _SC_INT_MAX, _SC_INT_MIN, _SC_LONG_BIT, _SC_WORD_BIT, _SC_MB_LEN_MAX, _SC_NZERO, _SC_SSIZE_MAX, _SC_SCHAR_MAX, _SC_SCHAR_MIN, _SC_SHRT_MAX, _SC_SHRT_MIN, _SC_UCHAR_MAX, _SC_UINT_MAX, _SC_ULONG_MAX, _SC_USHRT_MAX, _SC_NL_ARGMAX, _SC_NL_LANGMAX, _SC_NL_MSGMAX, _SC_NL_NMAX, _SC_NL_SETMAX, _SC_NL_TEXTMAX, _SC_XBS5_ILP32_OFF32, _SC_XBS5_ILP32_OFFBIG, _SC_XBS5_LP64_OFF64, _SC_XBS5_LPBIG_OFFBIG, _SC_XOPEN_LEGACY, _SC_XOPEN_REALTIME, _SC_XOPEN_REALTIME_THREADS, _SC_ADVISORY_INFO, _SC_BARRIERS, _SC_BASE, _SC_C_LANG_SUPPORT, _SC_C_LANG_SUPPORT_R, _SC_CLOCK_SELECTION, _SC_CPUTIME, _SC_THREAD_CPUTIME, _SC_DEVICE_IO, _SC_DEVICE_SPECIFIC, _SC_DEVICE_SPECIFIC_R, _SC_FD_MGMT, _SC_FIFO, _SC_PIPE, _SC_FILE_ATTRIBUTES, _SC_FILE_LOCKING, _SC_FILE_SYSTEM, _SC_MONOTONIC_CLOCK, _SC_MULTI_PROCESS, _SC_SINGLE_PROCESS, _SC_NETWORKING, _SC_READER_WRITER_LOCKS, _SC_SPIN_LOCKS, _SC_REGEXP, _SC_REGEX_VERSION, _SC_SHELL, _SC_SIGNALS, _SC_SPAWN, _SC_SPORADIC_SERVER, _SC_THREAD_SPORADIC_SERVER, _SC_SYSTEM_DATABASE, _SC_SYSTEM_DATABASE_R, _SC_TIMEOUTS, _SC_TYPED_MEMORY_OBJECTS, _SC_USER_GROUPS, _SC_USER_GROUPS_R, _SC_2_PBS, _SC_2_PBS_ACCOUNTING, _SC_2_PBS_LOCATE, _SC_2_PBS_MESSAGE, _SC_2_PBS_TRACK, _SC_SYMLOOP_MAX, _SC_STREAMS, _SC_2_PBS_CHECKPOINT, _SC_V6_ILP32_OFF32, _SC_V6_ILP32_OFFBIG, _SC_V6_LP64_OFF64, _SC_V6_LPBIG_OFFBIG, _SC_HOST_NAME_MAX, _SC_TRACE, _SC_TRACE_EVENT_FILTER, _SC_TRACE_INHERIT, _SC_TRACE_LOG, _SC_LEVEL1_ICACHE_SIZE, _SC_LEVEL1_ICACHE_ASSOC, _SC_LEVEL1_ICACHE_LINESIZE, _SC_LEVEL1_DCACHE_SIZE, _SC_LEVEL1_DCACHE_ASSOC, _SC_LEVEL1_DCACHE_LINESIZE, _SC_LEVEL2_CACHE_SIZE, _SC_LEVEL2_CACHE_ASSOC, _SC_LEVEL2_CACHE_LINESIZE, _SC_LEVEL3_CACHE_SIZE, _SC_LEVEL3_CACHE_ASSOC, _SC_LEVEL3_CACHE_LINESIZE, _SC_LEVEL4_CACHE_SIZE, _SC_LEVEL4_CACHE_ASSOC, _SC_LEVEL4_CACHE_LINESIZE, _SC_IPV6 = _SC_LEVEL1_ICACHE_SIZE + 50, _SC_RAW_SOCKETS, _SC_V7_ILP32_OFF32, _SC_V7_ILP32_OFFBIG, _SC_V7_LP64_OFF64, _SC_V7_LPBIG_OFFBIG, _SC_SS_REPL_MAX, _SC_TRACE_EVENT_NAME_MAX, _SC_TRACE_NAME_MAX, _SC_TRACE_SYS_MAX, _SC_TRACE_USER_EVENT_MAX, _SC_XOPEN_STREAMS, _SC_THREAD_ROBUST_PRIO_INHERIT, _SC_THREAD_ROBUST_PRIO_PROTECT }; enum { _CS_PATH, _CS_V6_WIDTH_RESTRICTED_ENVS, _CS_GNU_LIBC_VERSION, _CS_GNU_LIBPTHREAD_VERSION, _CS_V5_WIDTH_RESTRICTED_ENVS, _CS_V7_WIDTH_RESTRICTED_ENVS, _CS_LFS_CFLAGS = 1000, _CS_LFS_LDFLAGS, _CS_LFS_LIBS, _CS_LFS_LINTFLAGS, _CS_LFS64_CFLAGS, _CS_LFS64_LDFLAGS, _CS_LFS64_LIBS, _CS_LFS64_LINTFLAGS, _CS_XBS5_ILP32_OFF32_CFLAGS = 1100, _CS_XBS5_ILP32_OFF32_LDFLAGS, _CS_XBS5_ILP32_OFF32_LIBS, _CS_XBS5_ILP32_OFF32_LINTFLAGS, _CS_XBS5_ILP32_OFFBIG_CFLAGS, _CS_XBS5_ILP32_OFFBIG_LDFLAGS, _CS_XBS5_ILP32_OFFBIG_LIBS, _CS_XBS5_ILP32_OFFBIG_LINTFLAGS, _CS_XBS5_LP64_OFF64_CFLAGS, _CS_XBS5_LP64_OFF64_LDFLAGS, _CS_XBS5_LP64_OFF64_LIBS, _CS_XBS5_LP64_OFF64_LINTFLAGS, _CS_XBS5_LPBIG_OFFBIG_CFLAGS, _CS_XBS5_LPBIG_OFFBIG_LDFLAGS, _CS_XBS5_LPBIG_OFFBIG_LIBS, _CS_XBS5_LPBIG_OFFBIG_LINTFLAGS, _CS_POSIX_V6_ILP32_OFF32_CFLAGS, _CS_POSIX_V6_ILP32_OFF32_LDFLAGS, _CS_POSIX_V6_ILP32_OFF32_LIBS, _CS_POSIX_V6_ILP32_OFF32_LINTFLAGS, _CS_POSIX_V6_ILP32_OFFBIG_CFLAGS, _CS_POSIX_V6_ILP32_OFFBIG_LDFLAGS, _CS_POSIX_V6_ILP32_OFFBIG_LIBS, _CS_POSIX_V6_ILP32_OFFBIG_LINTFLAGS, _CS_POSIX_V6_LP64_OFF64_CFLAGS, _CS_POSIX_V6_LP64_OFF64_LDFLAGS, _CS_POSIX_V6_LP64_OFF64_LIBS, _CS_POSIX_V6_LP64_OFF64_LINTFLAGS, _CS_POSIX_V6_LPBIG_OFFBIG_CFLAGS, _CS_POSIX_V6_LPBIG_OFFBIG_LDFLAGS, _CS_POSIX_V6_LPBIG_OFFBIG_LIBS, _CS_POSIX_V6_LPBIG_OFFBIG_LINTFLAGS, _CS_POSIX_V7_ILP32_OFF32_CFLAGS, _CS_POSIX_V7_ILP32_OFF32_LDFLAGS, _CS_POSIX_V7_ILP32_OFF32_LIBS, _CS_POSIX_V7_ILP32_OFF32_LINTFLAGS, _CS_POSIX_V7_ILP32_OFFBIG_CFLAGS, _CS_POSIX_V7_ILP32_OFFBIG_LDFLAGS, _CS_POSIX_V7_ILP32_OFFBIG_LIBS, _CS_POSIX_V7_ILP32_OFFBIG_LINTFLAGS, _CS_POSIX_V7_LP64_OFF64_CFLAGS, _CS_POSIX_V7_LP64_OFF64_LDFLAGS, _CS_POSIX_V7_LP64_OFF64_LIBS, _CS_POSIX_V7_LP64_OFF64_LINTFLAGS, _CS_POSIX_V7_LPBIG_OFFBIG_CFLAGS, _CS_POSIX_V7_LPBIG_OFFBIG_LDFLAGS, _CS_POSIX_V7_LPBIG_OFFBIG_LIBS, _CS_POSIX_V7_LPBIG_OFFBIG_LINTFLAGS, _CS_V6_ENV, _CS_V7_ENV }; # 610 "/usr/include/unistd.h" 2 3 4 extern long int pathconf (const char *__path, int __name) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern long int fpathconf (int __fd, int __name) __attribute__ ((__nothrow__ , __leaf__)); extern long int sysconf (int __name) __attribute__ ((__nothrow__ , __leaf__)); extern size_t confstr (int __name, char *__buf, size_t __len) __attribute__ ((__nothrow__ , __leaf__)); extern __pid_t getpid (void) __attribute__ ((__nothrow__ , __leaf__)); extern __pid_t getppid (void) __attribute__ ((__nothrow__ , __leaf__)); extern __pid_t getpgrp (void) __attribute__ ((__nothrow__ , __leaf__)); # 646 "/usr/include/unistd.h" 3 4 extern __pid_t __getpgid (__pid_t __pid) __attribute__ ((__nothrow__ , __leaf__)); extern __pid_t getpgid (__pid_t __pid) __attribute__ ((__nothrow__ , __leaf__)); extern int setpgid (__pid_t __pid, __pid_t __pgid) __attribute__ ((__nothrow__ , __leaf__)); # 672 "/usr/include/unistd.h" 3 4 extern int setpgrp (void) __attribute__ ((__nothrow__ , __leaf__)); # 689 "/usr/include/unistd.h" 3 4 extern __pid_t setsid (void) __attribute__ ((__nothrow__ , __leaf__)); extern __pid_t getsid (__pid_t __pid) __attribute__ ((__nothrow__ , __leaf__)); extern __uid_t getuid (void) __attribute__ ((__nothrow__ , __leaf__)); extern __uid_t geteuid (void) __attribute__ ((__nothrow__ , __leaf__)); extern __gid_t getgid (void) __attribute__ ((__nothrow__ , __leaf__)); extern __gid_t getegid (void) __attribute__ ((__nothrow__ , __leaf__)); extern int getgroups (int __size, __gid_t __list[]) __attribute__ ((__nothrow__ , __leaf__)) ; # 722 "/usr/include/unistd.h" 3 4 extern int setuid (__uid_t __uid) __attribute__ ((__nothrow__ , __leaf__)) ; extern int setreuid (__uid_t __ruid, __uid_t __euid) __attribute__ ((__nothrow__ , __leaf__)) ; extern int seteuid (__uid_t __uid) __attribute__ ((__nothrow__ , __leaf__)) ; extern int setgid (__gid_t __gid) __attribute__ ((__nothrow__ , __leaf__)) ; extern int setregid (__gid_t __rgid, __gid_t __egid) __attribute__ ((__nothrow__ , __leaf__)) ; extern int setegid (__gid_t __gid) __attribute__ ((__nothrow__ , __leaf__)) ; # 778 "/usr/include/unistd.h" 3 4 extern __pid_t fork (void) __attribute__ ((__nothrow__)); extern __pid_t vfork (void) __attribute__ ((__nothrow__ , __leaf__)); extern char *ttyname (int __fd) __attribute__ ((__nothrow__ , __leaf__)); extern int ttyname_r (int __fd, char *__buf, size_t __buflen) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (2))) ; extern int isatty (int __fd) __attribute__ ((__nothrow__ , __leaf__)); extern int ttyslot (void) __attribute__ ((__nothrow__ , __leaf__)); extern int link (const char *__from, const char *__to) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))) ; extern int linkat (int __fromfd, const char *__from, int __tofd, const char *__to, int __flags) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (2, 4))) ; extern int symlink (const char *__from, const char *__to) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))) ; extern ssize_t readlink (const char *__restrict __path, char *__restrict __buf, size_t __len) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))) ; extern int symlinkat (const char *__from, int __tofd, const char *__to) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 3))) ; extern ssize_t readlinkat (int __fd, const char *__restrict __path, char *__restrict __buf, size_t __len) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (2, 3))) ; extern int unlink (const char *__name) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern int unlinkat (int __fd, const char *__name, int __flag) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (2))); extern int rmdir (const char *__path) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern __pid_t tcgetpgrp (int __fd) __attribute__ ((__nothrow__ , __leaf__)); extern int tcsetpgrp (int __fd, __pid_t __pgrp_id) __attribute__ ((__nothrow__ , __leaf__)); extern char *getlogin (void); extern int getlogin_r (char *__name, size_t __name_len) __attribute__ ((__nonnull__ (1))); extern int setlogin (const char *__name) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); # 893 "/usr/include/unistd.h" 3 4 # 1 "/usr/include/getopt.h" 1 3 4 # 58 "/usr/include/getopt.h" 3 4 extern char *optarg; # 72 "/usr/include/getopt.h" 3 4 extern int optind; extern int opterr; extern int optopt; # 151 "/usr/include/getopt.h" 3 4 extern int getopt (int ___argc, char *const *___argv, const char *__shortopts) __attribute__ ((__nothrow__ , __leaf__)); # 894 "/usr/include/unistd.h" 2 3 4 extern int gethostname (char *__name, size_t __len) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern int sethostname (const char *__name, size_t __len) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))) ; extern int sethostid (long int __id) __attribute__ ((__nothrow__ , __leaf__)) ; extern int getdomainname (char *__name, size_t __len) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))) ; extern int setdomainname (const char *__name, size_t __len) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))) ; extern int vhangup (void) __attribute__ ((__nothrow__ , __leaf__)); extern int revoke (const char *__file) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))) ; extern int profil (unsigned short int *__sample_buffer, size_t __size, size_t __offset, unsigned int __scale) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern int acct (const char *__name) __attribute__ ((__nothrow__ , __leaf__)); extern char *getusershell (void) __attribute__ ((__nothrow__ , __leaf__)); extern void endusershell (void) __attribute__ ((__nothrow__ , __leaf__)); extern void setusershell (void) __attribute__ ((__nothrow__ , __leaf__)); extern int daemon (int __nochdir, int __noclose) __attribute__ ((__nothrow__ , __leaf__)) ; extern int chroot (const char *__path) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))) ; extern char *getpass (const char *__prompt) __attribute__ ((__nonnull__ (1))); extern int fsync (int __fd); # 991 "/usr/include/unistd.h" 3 4 extern long int gethostid (void); extern void sync (void) __attribute__ ((__nothrow__ , __leaf__)); extern int getpagesize (void) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); extern int getdtablesize (void) __attribute__ ((__nothrow__ , __leaf__)); # 1015 "/usr/include/unistd.h" 3 4 extern int truncate (const char *__file, __off_t __length) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))) ; # 1038 "/usr/include/unistd.h" 3 4 extern int ftruncate (int __fd, __off_t __length) __attribute__ ((__nothrow__ , __leaf__)) ; # 1059 "/usr/include/unistd.h" 3 4 extern int brk (void *__addr) __attribute__ ((__nothrow__ , __leaf__)) ; extern void *sbrk (intptr_t __delta) __attribute__ ((__nothrow__ , __leaf__)); # 1080 "/usr/include/unistd.h" 3 4 extern long int syscall (long int __sysno, ...) __attribute__ ((__nothrow__ , __leaf__)); # 1103 "/usr/include/unistd.h" 3 4 extern int lockf (int __fd, int __cmd, __off_t __len) ; # 1134 "/usr/include/unistd.h" 3 4 extern int fdatasync (int __fildes); # 1172 "/usr/include/unistd.h" 3 4 # 3 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 Defined "HAVE_UNISTD_H" to "1" ================================================================================ TEST check from config.headers(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: netinet/in.h sh: tau_cc.sh -E -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.headers /tmp/petsc-U9YCMv/config.headers/conftest.c Executing: tau_cc.sh -E -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.headers /tmp/petsc-U9YCMv/config.headers/conftest.c sh: # 1 "/tmp/petsc-U9YCMv/config.headers/conftest.c" # 1 "" # 1 "/tmp/petsc-U9YCMv/config.headers/conftest.c" # 1 "/tmp/petsc-U9YCMv/config.headers/confdefs.h" 1 # 2 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 # 1 "/tmp/petsc-U9YCMv/config.headers/conffix.h" 1 # 3 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 # 1 "/usr/include/netinet/in.h" 1 3 4 # 22 "/usr/include/netinet/in.h" 3 4 # 1 "/usr/include/features.h" 1 3 4 # 341 "/usr/include/features.h" 3 4 # 1 "/usr/include/stdc-predef.h" 1 3 4 # 30 "/usr/include/stdc-predef.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/predefs.h" 1 3 4 # 31 "/usr/include/stdc-predef.h" 2 3 4 # 342 "/usr/include/features.h" 2 3 4 # 371 "/usr/include/features.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/sys/cdefs.h" 1 3 4 # 385 "/usr/include/x86_64-linux-gnu/sys/cdefs.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/wordsize.h" 1 3 4 # 386 "/usr/include/x86_64-linux-gnu/sys/cdefs.h" 2 3 4 # 372 "/usr/include/features.h" 2 3 4 # 395 "/usr/include/features.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/gnu/stubs.h" 1 3 4 # 10 "/usr/include/x86_64-linux-gnu/gnu/stubs.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/gnu/stubs-64.h" 1 3 4 # 11 "/usr/include/x86_64-linux-gnu/gnu/stubs.h" 2 3 4 # 396 "/usr/include/features.h" 2 3 4 # 23 "/usr/include/netinet/in.h" 2 3 4 # 1 "/usr/lib/gcc/x86_64-linux-gnu/4.7/include/stdint.h" 1 3 4 # 1 "/usr/include/stdint.h" 1 3 4 # 26 "/usr/include/stdint.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/wchar.h" 1 3 4 # 27 "/usr/include/stdint.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/wordsize.h" 1 3 4 # 28 "/usr/include/stdint.h" 2 3 4 # 36 "/usr/include/stdint.h" 3 4 typedef signed char int8_t; typedef short int int16_t; typedef int int32_t; typedef long int int64_t; typedef unsigned char uint8_t; typedef unsigned short int uint16_t; typedef unsigned int uint32_t; typedef unsigned long int uint64_t; # 65 "/usr/include/stdint.h" 3 4 typedef signed char int_least8_t; typedef short int int_least16_t; typedef int int_least32_t; typedef long int int_least64_t; typedef unsigned char uint_least8_t; typedef unsigned short int uint_least16_t; typedef unsigned int uint_least32_t; typedef unsigned long int uint_least64_t; # 90 "/usr/include/stdint.h" 3 4 typedef signed char int_fast8_t; typedef long int int_fast16_t; typedef long int int_fast32_t; typedef long int int_fast64_t; # 103 "/usr/include/stdint.h" 3 4 typedef unsigned char uint_fast8_t; typedef unsigned long int uint_fast16_t; typedef unsigned long int uint_fast32_t; typedef unsigned long int uint_fast64_t; # 119 "/usr/include/stdint.h" 3 4 typedef long int intptr_t; typedef unsigned long int uintptr_t; # 134 "/usr/include/stdint.h" 3 4 typedef long int intmax_t; typedef unsigned long int uintmax_t; # 4 "/usr/lib/gcc/x86_64-linux-gnu/4.7/include/stdint.h" 2 3 4 # 24 "/usr/include/netinet/in.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/sys/socket.h" 1 3 4 # 25 "/usr/include/x86_64-linux-gnu/sys/socket.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/sys/uio.h" 1 3 4 # 24 "/usr/include/x86_64-linux-gnu/sys/uio.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/sys/types.h" 1 3 4 # 27 "/usr/include/x86_64-linux-gnu/sys/types.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/types.h" 1 3 4 # 27 "/usr/include/x86_64-linux-gnu/bits/types.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/wordsize.h" 1 3 4 # 28 "/usr/include/x86_64-linux-gnu/bits/types.h" 2 3 4 typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; # 130 "/usr/include/x86_64-linux-gnu/bits/types.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/typesizes.h" 1 3 4 # 131 "/usr/include/x86_64-linux-gnu/bits/types.h" 2 3 4 typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned long int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef long int __suseconds_t; typedef int __daddr_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __fsword_t; typedef long int __ssize_t; typedef long int __syscall_slong_t; typedef unsigned long int __syscall_ulong_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; # 30 "/usr/include/x86_64-linux-gnu/sys/types.h" 2 3 4 typedef __u_char u_char; typedef __u_short u_short; typedef __u_int u_int; typedef __u_long u_long; typedef __quad_t quad_t; typedef __u_quad_t u_quad_t; typedef __fsid_t fsid_t; typedef __loff_t loff_t; typedef __ino_t ino_t; # 60 "/usr/include/x86_64-linux-gnu/sys/types.h" 3 4 typedef __dev_t dev_t; typedef __gid_t gid_t; typedef __mode_t mode_t; typedef __nlink_t nlink_t; typedef __uid_t uid_t; typedef __off_t off_t; # 98 "/usr/include/x86_64-linux-gnu/sys/types.h" 3 4 typedef __pid_t pid_t; typedef __id_t id_t; typedef __ssize_t ssize_t; typedef __daddr_t daddr_t; typedef __caddr_t caddr_t; typedef __key_t key_t; # 132 "/usr/include/x86_64-linux-gnu/sys/types.h" 3 4 # 1 "/usr/include/time.h" 1 3 4 # 57 "/usr/include/time.h" 3 4 typedef __clock_t clock_t; # 73 "/usr/include/time.h" 3 4 typedef __time_t time_t; # 91 "/usr/include/time.h" 3 4 typedef __clockid_t clockid_t; # 103 "/usr/include/time.h" 3 4 typedef __timer_t timer_t; # 133 "/usr/include/x86_64-linux-gnu/sys/types.h" 2 3 4 # 146 "/usr/include/x86_64-linux-gnu/sys/types.h" 3 4 # 1 "/usr/lib/gcc/x86_64-linux-gnu/4.7/include/stddef.h" 1 3 4 # 213 "/usr/lib/gcc/x86_64-linux-gnu/4.7/include/stddef.h" 3 4 typedef long unsigned int size_t; # 147 "/usr/include/x86_64-linux-gnu/sys/types.h" 2 3 4 typedef unsigned long int ulong; typedef unsigned short int ushort; typedef unsigned int uint; # 200 "/usr/include/x86_64-linux-gnu/sys/types.h" 3 4 typedef unsigned int u_int8_t __attribute__ ((__mode__ (__QI__))); typedef unsigned int u_int16_t __attribute__ ((__mode__ (__HI__))); typedef unsigned int u_int32_t __attribute__ ((__mode__ (__SI__))); typedef unsigned int u_int64_t __attribute__ ((__mode__ (__DI__))); typedef int register_t __attribute__ ((__mode__ (__word__))); # 216 "/usr/include/x86_64-linux-gnu/sys/types.h" 3 4 # 1 "/usr/include/endian.h" 1 3 4 # 36 "/usr/include/endian.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/endian.h" 1 3 4 # 37 "/usr/include/endian.h" 2 3 4 # 60 "/usr/include/endian.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/byteswap.h" 1 3 4 # 28 "/usr/include/x86_64-linux-gnu/bits/byteswap.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/wordsize.h" 1 3 4 # 29 "/usr/include/x86_64-linux-gnu/bits/byteswap.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/byteswap-16.h" 1 3 4 # 36 "/usr/include/x86_64-linux-gnu/bits/byteswap.h" 2 3 4 # 44 "/usr/include/x86_64-linux-gnu/bits/byteswap.h" 3 4 static __inline unsigned int __bswap_32 (unsigned int __bsx) { return __builtin_bswap32 (__bsx); } # 108 "/usr/include/x86_64-linux-gnu/bits/byteswap.h" 3 4 static __inline __uint64_t __bswap_64 (__uint64_t __bsx) { return __builtin_bswap64 (__bsx); } # 61 "/usr/include/endian.h" 2 3 4 # 217 "/usr/include/x86_64-linux-gnu/sys/types.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/sys/select.h" 1 3 4 # 30 "/usr/include/x86_64-linux-gnu/sys/select.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/select.h" 1 3 4 # 22 "/usr/include/x86_64-linux-gnu/bits/select.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/wordsize.h" 1 3 4 # 23 "/usr/include/x86_64-linux-gnu/bits/select.h" 2 3 4 # 31 "/usr/include/x86_64-linux-gnu/sys/select.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/sigset.h" 1 3 4 # 23 "/usr/include/x86_64-linux-gnu/bits/sigset.h" 3 4 typedef int __sig_atomic_t; typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; # 34 "/usr/include/x86_64-linux-gnu/sys/select.h" 2 3 4 typedef __sigset_t sigset_t; # 1 "/usr/include/time.h" 1 3 4 # 120 "/usr/include/time.h" 3 4 struct timespec { __time_t tv_sec; __syscall_slong_t tv_nsec; }; # 44 "/usr/include/x86_64-linux-gnu/sys/select.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/time.h" 1 3 4 # 30 "/usr/include/x86_64-linux-gnu/bits/time.h" 3 4 struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; # 46 "/usr/include/x86_64-linux-gnu/sys/select.h" 2 3 4 typedef __suseconds_t suseconds_t; typedef long int __fd_mask; # 64 "/usr/include/x86_64-linux-gnu/sys/select.h" 3 4 typedef struct { __fd_mask __fds_bits[1024 / (8 * (int) sizeof (__fd_mask))]; } fd_set; typedef __fd_mask fd_mask; # 96 "/usr/include/x86_64-linux-gnu/sys/select.h" 3 4 # 106 "/usr/include/x86_64-linux-gnu/sys/select.h" 3 4 extern int select (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, struct timeval *__restrict __timeout); # 118 "/usr/include/x86_64-linux-gnu/sys/select.h" 3 4 extern int pselect (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, const struct timespec *__restrict __timeout, const __sigset_t *__restrict __sigmask); # 131 "/usr/include/x86_64-linux-gnu/sys/select.h" 3 4 # 220 "/usr/include/x86_64-linux-gnu/sys/types.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/sys/sysmacros.h" 1 3 4 # 29 "/usr/include/x86_64-linux-gnu/sys/sysmacros.h" 3 4 __extension__ extern unsigned int gnu_dev_major (unsigned long long int __dev) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); __extension__ extern unsigned int gnu_dev_minor (unsigned long long int __dev) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); __extension__ extern unsigned long long int gnu_dev_makedev (unsigned int __major, unsigned int __minor) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); # 63 "/usr/include/x86_64-linux-gnu/sys/sysmacros.h" 3 4 # 223 "/usr/include/x86_64-linux-gnu/sys/types.h" 2 3 4 typedef __blksize_t blksize_t; typedef __blkcnt_t blkcnt_t; typedef __fsblkcnt_t fsblkcnt_t; typedef __fsfilcnt_t fsfilcnt_t; # 270 "/usr/include/x86_64-linux-gnu/sys/types.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/pthreadtypes.h" 1 3 4 # 21 "/usr/include/x86_64-linux-gnu/bits/pthreadtypes.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/wordsize.h" 1 3 4 # 22 "/usr/include/x86_64-linux-gnu/bits/pthreadtypes.h" 2 3 4 # 60 "/usr/include/x86_64-linux-gnu/bits/pthreadtypes.h" 3 4 typedef unsigned long int pthread_t; union pthread_attr_t { char __size[56]; long int __align; }; typedef union pthread_attr_t pthread_attr_t; typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; # 90 "/usr/include/x86_64-linux-gnu/bits/pthreadtypes.h" 3 4 typedef union { struct __pthread_mutex_s { int __lock; unsigned int __count; int __owner; unsigned int __nusers; int __kind; int __spins; __pthread_list_t __list; # 115 "/usr/include/x86_64-linux-gnu/bits/pthreadtypes.h" 3 4 } __data; char __size[40]; long int __align; } pthread_mutex_t; typedef union { char __size[4]; int __align; } pthread_mutexattr_t; typedef union { struct { int __lock; unsigned int __futex; __extension__ unsigned long long int __total_seq; __extension__ unsigned long long int __wakeup_seq; __extension__ unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; __extension__ long long int __align; } pthread_cond_t; typedef union { char __size[4]; int __align; } pthread_condattr_t; typedef unsigned int pthread_key_t; typedef int pthread_once_t; typedef union { struct { int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; unsigned int __flags; } __data; # 202 "/usr/include/x86_64-linux-gnu/bits/pthreadtypes.h" 3 4 char __size[56]; long int __align; } pthread_rwlock_t; typedef union { char __size[8]; long int __align; } pthread_rwlockattr_t; typedef volatile int pthread_spinlock_t; typedef union { char __size[32]; long int __align; } pthread_barrier_t; typedef union { char __size[4]; int __align; } pthread_barrierattr_t; # 271 "/usr/include/x86_64-linux-gnu/sys/types.h" 2 3 4 # 25 "/usr/include/x86_64-linux-gnu/sys/uio.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/uio.h" 1 3 4 # 43 "/usr/include/x86_64-linux-gnu/bits/uio.h" 3 4 struct iovec { void *iov_base; size_t iov_len; }; # 30 "/usr/include/x86_64-linux-gnu/sys/uio.h" 2 3 4 # 40 "/usr/include/x86_64-linux-gnu/sys/uio.h" 3 4 extern ssize_t readv (int __fd, const struct iovec *__iovec, int __count) ; # 51 "/usr/include/x86_64-linux-gnu/sys/uio.h" 3 4 extern ssize_t writev (int __fd, const struct iovec *__iovec, int __count) ; # 66 "/usr/include/x86_64-linux-gnu/sys/uio.h" 3 4 extern ssize_t preadv (int __fd, const struct iovec *__iovec, int __count, __off_t __offset) ; # 78 "/usr/include/x86_64-linux-gnu/sys/uio.h" 3 4 extern ssize_t pwritev (int __fd, const struct iovec *__iovec, int __count, __off_t __offset) ; # 121 "/usr/include/x86_64-linux-gnu/sys/uio.h" 3 4 # 28 "/usr/include/x86_64-linux-gnu/sys/socket.h" 2 3 4 # 1 "/usr/lib/gcc/x86_64-linux-gnu/4.7/include/stddef.h" 1 3 4 # 30 "/usr/include/x86_64-linux-gnu/sys/socket.h" 2 3 4 # 39 "/usr/include/x86_64-linux-gnu/sys/socket.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/socket.h" 1 3 4 # 27 "/usr/include/x86_64-linux-gnu/bits/socket.h" 3 4 # 1 "/usr/lib/gcc/x86_64-linux-gnu/4.7/include/stddef.h" 1 3 4 # 28 "/usr/include/x86_64-linux-gnu/bits/socket.h" 2 3 4 typedef __socklen_t socklen_t; # 1 "/usr/include/x86_64-linux-gnu/bits/socket_type.h" 1 3 4 # 24 "/usr/include/x86_64-linux-gnu/bits/socket_type.h" 3 4 enum __socket_type { SOCK_STREAM = 1, SOCK_DGRAM = 2, SOCK_RAW = 3, SOCK_RDM = 4, SOCK_SEQPACKET = 5, SOCK_DCCP = 6, SOCK_PACKET = 10, SOCK_CLOEXEC = 02000000, SOCK_NONBLOCK = 00004000 }; # 39 "/usr/include/x86_64-linux-gnu/bits/socket.h" 2 3 4 # 144 "/usr/include/x86_64-linux-gnu/bits/socket.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/sockaddr.h" 1 3 4 # 28 "/usr/include/x86_64-linux-gnu/bits/sockaddr.h" 3 4 typedef unsigned short int sa_family_t; # 145 "/usr/include/x86_64-linux-gnu/bits/socket.h" 2 3 4 struct sockaddr { sa_family_t sa_family; char sa_data[14]; }; # 160 "/usr/include/x86_64-linux-gnu/bits/socket.h" 3 4 struct sockaddr_storage { sa_family_t ss_family; unsigned long int __ss_align; char __ss_padding[(128 - (2 * sizeof (unsigned long int)))]; }; enum { MSG_OOB = 0x01, MSG_PEEK = 0x02, MSG_DONTROUTE = 0x04, MSG_CTRUNC = 0x08, MSG_PROXY = 0x10, MSG_TRUNC = 0x20, MSG_DONTWAIT = 0x40, MSG_EOR = 0x80, MSG_WAITALL = 0x100, MSG_FIN = 0x200, MSG_SYN = 0x400, MSG_CONFIRM = 0x800, MSG_RST = 0x1000, MSG_ERRQUEUE = 0x2000, MSG_NOSIGNAL = 0x4000, MSG_MORE = 0x8000, MSG_WAITFORONE = 0x10000, MSG_FASTOPEN = 0x20000000, MSG_CMSG_CLOEXEC = 0x40000000 }; struct msghdr { void *msg_name; socklen_t msg_namelen; struct iovec *msg_iov; size_t msg_iovlen; void *msg_control; size_t msg_controllen; int msg_flags; }; struct cmsghdr { size_t cmsg_len; int cmsg_level; int cmsg_type; __extension__ unsigned char __cmsg_data []; }; # 270 "/usr/include/x86_64-linux-gnu/bits/socket.h" 3 4 extern struct cmsghdr *__cmsg_nxthdr (struct msghdr *__mhdr, struct cmsghdr *__cmsg) __attribute__ ((__nothrow__ , __leaf__)); # 297 "/usr/include/x86_64-linux-gnu/bits/socket.h" 3 4 enum { SCM_RIGHTS = 0x01 }; # 343 "/usr/include/x86_64-linux-gnu/bits/socket.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/asm/socket.h" 1 3 4 # 1 "/usr/include/asm-generic/socket.h" 1 3 4 # 1 "/usr/include/x86_64-linux-gnu/asm/sockios.h" 1 3 4 # 1 "/usr/include/asm-generic/sockios.h" 1 3 4 # 1 "/usr/include/x86_64-linux-gnu/asm/sockios.h" 2 3 4 # 5 "/usr/include/asm-generic/socket.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/asm/socket.h" 2 3 4 # 344 "/usr/include/x86_64-linux-gnu/bits/socket.h" 2 3 4 # 377 "/usr/include/x86_64-linux-gnu/bits/socket.h" 3 4 struct linger { int l_onoff; int l_linger; }; # 40 "/usr/include/x86_64-linux-gnu/sys/socket.h" 2 3 4 struct osockaddr { unsigned short int sa_family; unsigned char sa_data[14]; }; enum { SHUT_RD = 0, SHUT_WR, SHUT_RDWR }; # 114 "/usr/include/x86_64-linux-gnu/sys/socket.h" 3 4 extern int socket (int __domain, int __type, int __protocol) __attribute__ ((__nothrow__ , __leaf__)); extern int socketpair (int __domain, int __type, int __protocol, int __fds[2]) __attribute__ ((__nothrow__ , __leaf__)); extern int bind (int __fd, const struct sockaddr * __addr, socklen_t __len) __attribute__ ((__nothrow__ , __leaf__)); extern int getsockname (int __fd, struct sockaddr *__restrict __addr, socklen_t *__restrict __len) __attribute__ ((__nothrow__ , __leaf__)); # 138 "/usr/include/x86_64-linux-gnu/sys/socket.h" 3 4 extern int connect (int __fd, const struct sockaddr * __addr, socklen_t __len); extern int getpeername (int __fd, struct sockaddr *__restrict __addr, socklen_t *__restrict __len) __attribute__ ((__nothrow__ , __leaf__)); extern ssize_t send (int __fd, const void *__buf, size_t __n, int __flags); extern ssize_t recv (int __fd, void *__buf, size_t __n, int __flags); extern ssize_t sendto (int __fd, const void *__buf, size_t __n, int __flags, const struct sockaddr * __addr, socklen_t __addr_len); # 175 "/usr/include/x86_64-linux-gnu/sys/socket.h" 3 4 extern ssize_t recvfrom (int __fd, void *__restrict __buf, size_t __n, int __flags, struct sockaddr *__restrict __addr, socklen_t *__restrict __addr_len); extern ssize_t sendmsg (int __fd, const struct msghdr *__message, int __flags); # 203 "/usr/include/x86_64-linux-gnu/sys/socket.h" 3 4 extern ssize_t recvmsg (int __fd, struct msghdr *__message, int __flags); # 220 "/usr/include/x86_64-linux-gnu/sys/socket.h" 3 4 extern int getsockopt (int __fd, int __level, int __optname, void *__restrict __optval, socklen_t *__restrict __optlen) __attribute__ ((__nothrow__ , __leaf__)); extern int setsockopt (int __fd, int __level, int __optname, const void *__optval, socklen_t __optlen) __attribute__ ((__nothrow__ , __leaf__)); extern int listen (int __fd, int __n) __attribute__ ((__nothrow__ , __leaf__)); # 244 "/usr/include/x86_64-linux-gnu/sys/socket.h" 3 4 extern int accept (int __fd, struct sockaddr *__restrict __addr, socklen_t *__restrict __addr_len); # 262 "/usr/include/x86_64-linux-gnu/sys/socket.h" 3 4 extern int shutdown (int __fd, int __how) __attribute__ ((__nothrow__ , __leaf__)); extern int sockatmark (int __fd) __attribute__ ((__nothrow__ , __leaf__)); extern int isfdtype (int __fd, int __fdtype) __attribute__ ((__nothrow__ , __leaf__)); # 284 "/usr/include/x86_64-linux-gnu/sys/socket.h" 3 4 # 25 "/usr/include/netinet/in.h" 2 3 4 enum { IPPROTO_IP = 0, IPPROTO_HOPOPTS = 0, IPPROTO_ICMP = 1, IPPROTO_IGMP = 2, IPPROTO_IPIP = 4, IPPROTO_TCP = 6, IPPROTO_EGP = 8, IPPROTO_PUP = 12, IPPROTO_UDP = 17, IPPROTO_IDP = 22, IPPROTO_TP = 29, IPPROTO_DCCP = 33, IPPROTO_IPV6 = 41, IPPROTO_ROUTING = 43, IPPROTO_FRAGMENT = 44, IPPROTO_RSVP = 46, IPPROTO_GRE = 47, IPPROTO_ESP = 50, IPPROTO_AH = 51, IPPROTO_ICMPV6 = 58, IPPROTO_NONE = 59, IPPROTO_DSTOPTS = 60, IPPROTO_MTP = 92, IPPROTO_ENCAP = 98, IPPROTO_PIM = 103, IPPROTO_COMP = 108, IPPROTO_SCTP = 132, IPPROTO_UDPLITE = 136, IPPROTO_RAW = 255, IPPROTO_MAX }; typedef uint16_t in_port_t; enum { IPPORT_ECHO = 7, IPPORT_DISCARD = 9, IPPORT_SYSTAT = 11, IPPORT_DAYTIME = 13, IPPORT_NETSTAT = 15, IPPORT_FTP = 21, IPPORT_TELNET = 23, IPPORT_SMTP = 25, IPPORT_TIMESERVER = 37, IPPORT_NAMESERVER = 42, IPPORT_WHOIS = 43, IPPORT_MTP = 57, IPPORT_TFTP = 69, IPPORT_RJE = 77, IPPORT_FINGER = 79, IPPORT_TTYLINK = 87, IPPORT_SUPDUP = 95, IPPORT_EXECSERVER = 512, IPPORT_LOGINSERVER = 513, IPPORT_CMDSERVER = 514, IPPORT_EFSSERVER = 520, IPPORT_BIFFUDP = 512, IPPORT_WHOSERVER = 513, IPPORT_ROUTESERVER = 520, IPPORT_RESERVED = 1024, IPPORT_USERRESERVED = 5000 }; typedef uint32_t in_addr_t; struct in_addr { in_addr_t s_addr; }; # 197 "/usr/include/netinet/in.h" 3 4 struct in6_addr { union { uint8_t __u6_addr8[16]; uint16_t __u6_addr16[8]; uint32_t __u6_addr32[4]; } __in6_u; }; extern const struct in6_addr in6addr_any; extern const struct in6_addr in6addr_loopback; # 224 "/usr/include/netinet/in.h" 3 4 struct sockaddr_in { sa_family_t sin_family; in_port_t sin_port; struct in_addr sin_addr; unsigned char sin_zero[sizeof (struct sockaddr) - (sizeof (unsigned short int)) - sizeof (in_port_t) - sizeof (struct in_addr)]; }; struct sockaddr_in6 { sa_family_t sin6_family; in_port_t sin6_port; uint32_t sin6_flowinfo; struct in6_addr sin6_addr; uint32_t sin6_scope_id; }; struct ip_mreq { struct in_addr imr_multiaddr; struct in_addr imr_interface; }; struct ip_mreq_source { struct in_addr imr_multiaddr; struct in_addr imr_interface; struct in_addr imr_sourceaddr; }; struct ipv6_mreq { struct in6_addr ipv6mr_multiaddr; unsigned int ipv6mr_interface; }; struct group_req { uint32_t gr_interface; struct sockaddr_storage gr_group; }; struct group_source_req { uint32_t gsr_interface; struct sockaddr_storage gsr_group; struct sockaddr_storage gsr_source; }; struct ip_msfilter { struct in_addr imsf_multiaddr; struct in_addr imsf_interface; uint32_t imsf_fmode; uint32_t imsf_numsrc; struct in_addr imsf_slist[1]; }; struct group_filter { uint32_t gf_interface; struct sockaddr_storage gf_group; uint32_t gf_fmode; uint32_t gf_numsrc; struct sockaddr_storage gf_slist[1]; }; # 355 "/usr/include/netinet/in.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/in.h" 1 3 4 # 100 "/usr/include/x86_64-linux-gnu/bits/in.h" 3 4 struct ip_opts { struct in_addr ip_dst; char ip_opts[40]; }; struct ip_mreqn { struct in_addr imr_multiaddr; struct in_addr imr_address; int imr_ifindex; }; struct in_pktinfo { int ipi_ifindex; struct in_addr ipi_spec_dst; struct in_addr ipi_addr; }; # 356 "/usr/include/netinet/in.h" 2 3 4 # 364 "/usr/include/netinet/in.h" 3 4 extern uint32_t ntohl (uint32_t __netlong) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); extern uint16_t ntohs (uint16_t __netshort) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); extern uint32_t htonl (uint32_t __hostlong) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); extern uint16_t htons (uint16_t __hostshort) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); # 1 "/usr/include/x86_64-linux-gnu/bits/byteswap.h" 1 3 4 # 376 "/usr/include/netinet/in.h" 2 3 4 # 491 "/usr/include/netinet/in.h" 3 4 extern int bindresvport (int __sockfd, struct sockaddr_in *__sock_in) __attribute__ ((__nothrow__ , __leaf__)); extern int bindresvport6 (int __sockfd, struct sockaddr_in6 *__sock_in) __attribute__ ((__nothrow__ , __leaf__)); # 618 "/usr/include/netinet/in.h" 3 4 # 3 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 Defined "HAVE_NETINET_IN_H" to "1" ================================================================================ TEST checkRecursiveMacros from config.headers(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/headers.py:218) TESTING: checkRecursiveMacros from config.headers(config/BuildSystem/config/headers.py:218) Checks that the preprocessor allows recursive macros, and if not defines HAVE_BROKEN_RECURSIVE_MACRO sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.headers/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -fPIC -g /tmp/petsc-U9YCMv/config.headers/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.headers/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -fPIC -g /tmp/petsc-U9YCMv/config.headers/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.headers/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.headers Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.headers/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.headers -o /tmp/petsc-U9YCMv/config.headers/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" void a(int i, int j) {} #define a(b) a(b,__LINE__) int main() { a(0); ; return 0; } ================================================================================ TEST configureCacheDetails from PETSc.utilities.cacheDetails(/home/hills/seska-hills/packages/petsc-3.4.2/config/PETSc/utilities/cacheDetails.py:78) TESTING: configureCacheDetails from PETSc.utilities.cacheDetails(config/PETSc/utilities/cacheDetails.py:78) Try to determine the size and associativity of the cache. Pushing language C All intermediate test results are stored in /tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -fPIC -g /tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -fPIC -g /tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -o /tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include long getconf_LEVEL1_DCACHE_SIZE() { long val = sysconf(_SC_LEVEL1_DCACHE_SIZE); return (16 <= val && val <= 2147483647) ? val : 32768; } int main() { ; return 0; } Popping language C Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -fPIC -g /tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -fPIC -g /tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -o /tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include long getconf_LEVEL1_DCACHE_SIZE() { long val = sysconf(_SC_LEVEL1_DCACHE_SIZE); return (16 <= val && val <= 2147483647) ? val : 32768; } int main() { FILE *output = fopen("conftestval","w"); if (!output) return 1; fprintf(output,"%ld",getconf_LEVEL1_DCACHE_SIZE()); fclose(output);; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails/conftest -fPIC -g /tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails/conftest -fPIC -g /tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails/conftest -fPIC -g /tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Executing: /tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails/conftest sh: /tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails/conftest Executing: /tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails/conftest sh: Popping language C Defined "LEVEL1_DCACHE_SIZE" to "32768" Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -fPIC -g /tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -fPIC -g /tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -o /tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include long getconf_LEVEL1_DCACHE_LINESIZE() { long val = sysconf(_SC_LEVEL1_DCACHE_LINESIZE); return (16 <= val && val <= 2147483647) ? val : 32; } int main() { FILE *output = fopen("conftestval","w"); if (!output) return 1; fprintf(output,"%ld",getconf_LEVEL1_DCACHE_LINESIZE()); fclose(output);; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails/conftest -fPIC -g /tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails/conftest -fPIC -g /tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails/conftest -fPIC -g /tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Executing: /tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails/conftest sh: /tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails/conftest Executing: /tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails/conftest sh: Popping language C Defined "LEVEL1_DCACHE_LINESIZE" to "64" Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -fPIC -g /tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -fPIC -g /tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -o /tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include long getconf_LEVEL1_DCACHE_ASSOC() { long val = sysconf(_SC_LEVEL1_DCACHE_ASSOC); return (0 <= val && val <= 2147483647) ? val : 2; } int main() { FILE *output = fopen("conftestval","w"); if (!output) return 1; fprintf(output,"%ld",getconf_LEVEL1_DCACHE_ASSOC()); fclose(output);; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails/conftest -fPIC -g /tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails/conftest -fPIC -g /tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails/conftest -fPIC -g /tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Executing: /tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails/conftest sh: /tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails/conftest Executing: /tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails/conftest sh: Popping language C Defined "LEVEL1_DCACHE_ASSOC" to "8" ================================================================================ TEST checkMemcmp from config.functions(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/functions.py:78) TESTING: checkMemcmp from config.functions(config/BuildSystem/config/functions.py:78) Check for 8-bit clean memcmp All intermediate test results are stored in /tmp/petsc-U9YCMv/config.functions sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.functions/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.functions/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include void exit(int); int main() { char c0 = 0x40; char c1 = (char) 0x80; char c2 = (char) 0x81; exit(memcmp(&c0, &c2, 1) < 0 && memcmp(&c1, &c2, 1) < 0 ? 0 : 1); ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Executing: /tmp/petsc-U9YCMv/config.functions/conftest sh: /tmp/petsc-U9YCMv/config.functions/conftest Executing: /tmp/petsc-U9YCMv/config.functions/conftest sh: ================================================================================ TEST checkSysinfo from config.functions(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/functions.py:102) TESTING: checkSysinfo from config.functions(config/BuildSystem/config/functions.py:102) Check whether sysinfo takes three arguments, and if it does define HAVE_SYSINFO_3ARG Checking for function sysinfo sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.functions/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.functions/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char sysinfo(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char sysinfo(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_sysinfo) || defined (__stub___sysinfo) choke me #else sysinfo(); #endif ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Defined "HAVE_SYSINFO" to "1" Checking for header: linux/kernel.h sh: tau_cc.sh -E -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.headers /tmp/petsc-U9YCMv/config.headers/conftest.c Executing: tau_cc.sh -E -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.headers /tmp/petsc-U9YCMv/config.headers/conftest.c sh: # 1 "/tmp/petsc-U9YCMv/config.headers/conftest.c" # 1 "" # 1 "/tmp/petsc-U9YCMv/config.headers/conftest.c" # 1 "/tmp/petsc-U9YCMv/config.headers/confdefs.h" 1 # 2 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 # 1 "/tmp/petsc-U9YCMv/config.headers/conffix.h" 1 # 3 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 # 1 "/usr/include/linux/kernel.h" 1 3 4 # 1 "/usr/include/linux/sysinfo.h" 1 3 4 # 1 "/usr/include/linux/types.h" 1 3 4 # 1 "/usr/include/x86_64-linux-gnu/asm/types.h" 1 3 4 # 1 "/usr/include/asm-generic/types.h" 1 3 4 # 1 "/usr/include/asm-generic/int-ll64.h" 1 3 4 # 11 "/usr/include/asm-generic/int-ll64.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/asm/bitsperlong.h" 1 3 4 # 10 "/usr/include/x86_64-linux-gnu/asm/bitsperlong.h" 3 4 # 1 "/usr/include/asm-generic/bitsperlong.h" 1 3 4 # 11 "/usr/include/x86_64-linux-gnu/asm/bitsperlong.h" 2 3 4 # 12 "/usr/include/asm-generic/int-ll64.h" 2 3 4 typedef __signed__ char __s8; typedef unsigned char __u8; typedef __signed__ short __s16; typedef unsigned short __u16; typedef __signed__ int __s32; typedef unsigned int __u32; __extension__ typedef __signed__ long long __s64; __extension__ typedef unsigned long long __u64; # 8 "/usr/include/asm-generic/types.h" 2 3 4 # 5 "/usr/include/x86_64-linux-gnu/asm/types.h" 2 3 4 # 5 "/usr/include/linux/types.h" 2 3 4 # 1 "/usr/include/linux/posix_types.h" 1 3 4 # 1 "/usr/include/linux/stddef.h" 1 3 4 # 5 "/usr/include/linux/posix_types.h" 2 3 4 # 24 "/usr/include/linux/posix_types.h" 3 4 typedef struct { unsigned long fds_bits[1024 / (8 * sizeof(long))]; } __kernel_fd_set; typedef void (*__kernel_sighandler_t)(int); typedef int __kernel_key_t; typedef int __kernel_mqd_t; # 1 "/usr/include/x86_64-linux-gnu/asm/posix_types.h" 1 3 4 # 1 "/usr/include/x86_64-linux-gnu/asm/posix_types_64.h" 1 3 4 # 10 "/usr/include/x86_64-linux-gnu/asm/posix_types_64.h" 3 4 typedef unsigned short __kernel_old_uid_t; typedef unsigned short __kernel_old_gid_t; typedef unsigned long __kernel_old_dev_t; # 1 "/usr/include/asm-generic/posix_types.h" 1 3 4 # 14 "/usr/include/asm-generic/posix_types.h" 3 4 typedef long __kernel_long_t; typedef unsigned long __kernel_ulong_t; typedef __kernel_ulong_t __kernel_ino_t; typedef unsigned int __kernel_mode_t; typedef int __kernel_pid_t; typedef int __kernel_ipc_pid_t; typedef unsigned int __kernel_uid_t; typedef unsigned int __kernel_gid_t; typedef __kernel_long_t __kernel_suseconds_t; typedef int __kernel_daddr_t; typedef unsigned int __kernel_uid32_t; typedef unsigned int __kernel_gid32_t; # 71 "/usr/include/asm-generic/posix_types.h" 3 4 typedef __kernel_ulong_t __kernel_size_t; typedef __kernel_long_t __kernel_ssize_t; typedef __kernel_long_t __kernel_ptrdiff_t; typedef struct { int val[2]; } __kernel_fsid_t; typedef __kernel_long_t __kernel_off_t; typedef long long __kernel_loff_t; typedef __kernel_long_t __kernel_time_t; typedef __kernel_long_t __kernel_clock_t; typedef int __kernel_timer_t; typedef int __kernel_clockid_t; typedef char * __kernel_caddr_t; typedef unsigned short __kernel_uid16_t; typedef unsigned short __kernel_gid16_t; # 18 "/usr/include/x86_64-linux-gnu/asm/posix_types_64.h" 2 3 4 # 7 "/usr/include/x86_64-linux-gnu/asm/posix_types.h" 2 3 4 # 36 "/usr/include/linux/posix_types.h" 2 3 4 # 9 "/usr/include/linux/types.h" 2 3 4 # 27 "/usr/include/linux/types.h" 3 4 typedef __u16 __le16; typedef __u16 __be16; typedef __u32 __le32; typedef __u32 __be32; typedef __u64 __le64; typedef __u64 __be64; typedef __u16 __sum16; typedef __u32 __wsum; # 5 "/usr/include/linux/sysinfo.h" 2 3 4 struct sysinfo { __kernel_long_t uptime; __kernel_ulong_t loads[3]; __kernel_ulong_t totalram; __kernel_ulong_t freeram; __kernel_ulong_t sharedram; __kernel_ulong_t bufferram; __kernel_ulong_t totalswap; __kernel_ulong_t freeswap; __u16 procs; __u16 pad; __kernel_ulong_t totalhigh; __kernel_ulong_t freehigh; __u32 mem_unit; char _f[20-2*sizeof(__kernel_ulong_t)-sizeof(__u32)]; }; # 5 "/usr/include/linux/kernel.h" 2 3 4 # 3 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 Defined "HAVE_LINUX_KERNEL_H" to "1" Checking for header: sys/sysinfo.h sh: tau_cc.sh -E -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.headers /tmp/petsc-U9YCMv/config.headers/conftest.c Executing: tau_cc.sh -E -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.headers /tmp/petsc-U9YCMv/config.headers/conftest.c sh: # 1 "/tmp/petsc-U9YCMv/config.headers/conftest.c" # 1 "" # 1 "/tmp/petsc-U9YCMv/config.headers/conftest.c" # 1 "/tmp/petsc-U9YCMv/config.headers/confdefs.h" 1 # 2 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 # 1 "/tmp/petsc-U9YCMv/config.headers/conffix.h" 1 # 3 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 # 1 "/usr/include/x86_64-linux-gnu/sys/sysinfo.h" 1 3 4 # 21 "/usr/include/x86_64-linux-gnu/sys/sysinfo.h" 3 4 # 1 "/usr/include/features.h" 1 3 4 # 341 "/usr/include/features.h" 3 4 # 1 "/usr/include/stdc-predef.h" 1 3 4 # 30 "/usr/include/stdc-predef.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/predefs.h" 1 3 4 # 31 "/usr/include/stdc-predef.h" 2 3 4 # 342 "/usr/include/features.h" 2 3 4 # 371 "/usr/include/features.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/sys/cdefs.h" 1 3 4 # 385 "/usr/include/x86_64-linux-gnu/sys/cdefs.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/wordsize.h" 1 3 4 # 386 "/usr/include/x86_64-linux-gnu/sys/cdefs.h" 2 3 4 # 372 "/usr/include/features.h" 2 3 4 # 395 "/usr/include/features.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/gnu/stubs.h" 1 3 4 # 10 "/usr/include/x86_64-linux-gnu/gnu/stubs.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/gnu/stubs-64.h" 1 3 4 # 11 "/usr/include/x86_64-linux-gnu/gnu/stubs.h" 2 3 4 # 396 "/usr/include/features.h" 2 3 4 # 22 "/usr/include/x86_64-linux-gnu/sys/sysinfo.h" 2 3 4 # 1 "/usr/include/linux/kernel.h" 1 3 4 # 1 "/usr/include/linux/sysinfo.h" 1 3 4 # 1 "/usr/include/linux/types.h" 1 3 4 # 1 "/usr/include/x86_64-linux-gnu/asm/types.h" 1 3 4 # 1 "/usr/include/asm-generic/types.h" 1 3 4 # 1 "/usr/include/asm-generic/int-ll64.h" 1 3 4 # 11 "/usr/include/asm-generic/int-ll64.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/asm/bitsperlong.h" 1 3 4 # 10 "/usr/include/x86_64-linux-gnu/asm/bitsperlong.h" 3 4 # 1 "/usr/include/asm-generic/bitsperlong.h" 1 3 4 # 11 "/usr/include/x86_64-linux-gnu/asm/bitsperlong.h" 2 3 4 # 12 "/usr/include/asm-generic/int-ll64.h" 2 3 4 typedef __signed__ char __s8; typedef unsigned char __u8; typedef __signed__ short __s16; typedef unsigned short __u16; typedef __signed__ int __s32; typedef unsigned int __u32; __extension__ typedef __signed__ long long __s64; __extension__ typedef unsigned long long __u64; # 8 "/usr/include/asm-generic/types.h" 2 3 4 # 5 "/usr/include/x86_64-linux-gnu/asm/types.h" 2 3 4 # 5 "/usr/include/linux/types.h" 2 3 4 # 1 "/usr/include/linux/posix_types.h" 1 3 4 # 1 "/usr/include/linux/stddef.h" 1 3 4 # 5 "/usr/include/linux/posix_types.h" 2 3 4 # 24 "/usr/include/linux/posix_types.h" 3 4 typedef struct { unsigned long fds_bits[1024 / (8 * sizeof(long))]; } __kernel_fd_set; typedef void (*__kernel_sighandler_t)(int); typedef int __kernel_key_t; typedef int __kernel_mqd_t; # 1 "/usr/include/x86_64-linux-gnu/asm/posix_types.h" 1 3 4 # 1 "/usr/include/x86_64-linux-gnu/asm/posix_types_64.h" 1 3 4 # 10 "/usr/include/x86_64-linux-gnu/asm/posix_types_64.h" 3 4 typedef unsigned short __kernel_old_uid_t; typedef unsigned short __kernel_old_gid_t; typedef unsigned long __kernel_old_dev_t; # 1 "/usr/include/asm-generic/posix_types.h" 1 3 4 # 14 "/usr/include/asm-generic/posix_types.h" 3 4 typedef long __kernel_long_t; typedef unsigned long __kernel_ulong_t; typedef __kernel_ulong_t __kernel_ino_t; typedef unsigned int __kernel_mode_t; typedef int __kernel_pid_t; typedef int __kernel_ipc_pid_t; typedef unsigned int __kernel_uid_t; typedef unsigned int __kernel_gid_t; typedef __kernel_long_t __kernel_suseconds_t; typedef int __kernel_daddr_t; typedef unsigned int __kernel_uid32_t; typedef unsigned int __kernel_gid32_t; # 71 "/usr/include/asm-generic/posix_types.h" 3 4 typedef __kernel_ulong_t __kernel_size_t; typedef __kernel_long_t __kernel_ssize_t; typedef __kernel_long_t __kernel_ptrdiff_t; typedef struct { int val[2]; } __kernel_fsid_t; typedef __kernel_long_t __kernel_off_t; typedef long long __kernel_loff_t; typedef __kernel_long_t __kernel_time_t; typedef __kernel_long_t __kernel_clock_t; typedef int __kernel_timer_t; typedef int __kernel_clockid_t; typedef char * __kernel_caddr_t; typedef unsigned short __kernel_uid16_t; typedef unsigned short __kernel_gid16_t; # 18 "/usr/include/x86_64-linux-gnu/asm/posix_types_64.h" 2 3 4 # 7 "/usr/include/x86_64-linux-gnu/asm/posix_types.h" 2 3 4 # 36 "/usr/include/linux/posix_types.h" 2 3 4 # 9 "/usr/include/linux/types.h" 2 3 4 # 27 "/usr/include/linux/types.h" 3 4 typedef __u16 __le16; typedef __u16 __be16; typedef __u32 __le32; typedef __u32 __be32; typedef __u64 __le64; typedef __u64 __be64; typedef __u16 __sum16; typedef __u32 __wsum; # 5 "/usr/include/linux/sysinfo.h" 2 3 4 struct sysinfo { __kernel_long_t uptime; __kernel_ulong_t loads[3]; __kernel_ulong_t totalram; __kernel_ulong_t freeram; __kernel_ulong_t sharedram; __kernel_ulong_t bufferram; __kernel_ulong_t totalswap; __kernel_ulong_t freeswap; __u16 procs; __u16 pad; __kernel_ulong_t totalhigh; __kernel_ulong_t freehigh; __u32 mem_unit; char _f[20-2*sizeof(__kernel_ulong_t)-sizeof(__u32)]; }; # 5 "/usr/include/linux/kernel.h" 2 3 4 # 25 "/usr/include/x86_64-linux-gnu/sys/sysinfo.h" 2 3 4 extern int sysinfo (struct sysinfo *__info) __attribute__ ((__nothrow__ , __leaf__)); extern int get_nprocs_conf (void) __attribute__ ((__nothrow__ , __leaf__)); extern int get_nprocs (void) __attribute__ ((__nothrow__ , __leaf__)); extern long int get_phys_pages (void) __attribute__ ((__nothrow__ , __leaf__)); extern long int get_avphys_pages (void) __attribute__ ((__nothrow__ , __leaf__)); # 3 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 Defined "HAVE_SYS_SYSINFO_H" to "1" Checking for header: sys/systeminfo.h sh: tau_cc.sh -E -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.headers /tmp/petsc-U9YCMv/config.headers/conftest.c Executing: tau_cc.sh -E -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.headers /tmp/petsc-U9YCMv/config.headers/conftest.c sh: # 1 "/tmp/petsc-U9YCMv/config.headers/conftest.c" # 1 "" # 1 "/tmp/petsc-U9YCMv/config.headers/conftest.c" # 1 "/tmp/petsc-U9YCMv/config.headers/confdefs.h" 1 # 2 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 # 1 "/tmp/petsc-U9YCMv/config.headers/conffix.h" 1 # 3 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 Possible ERROR while running preprocessor: /tmp/petsc-U9YCMv/config.headers/conftest.c:3:28: fatal error: sys/systeminfo.h: No such file or directory compilation terminated. make: *** [all] Error 1 ret = 256 error message = {/tmp/petsc-U9YCMv/config.headers/conftest.c:3:28: fatal error: sys/systeminfo.h: No such file or directory compilation terminated. make: *** [all] Error 1 } Source: #include "confdefs.h" #include "conffix.h" #include sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.functions/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions PDT: Error: Couldn't create conftest.pdb: Trying the alternate PDT Rose parser based on EDG 4.4: /home/hills/seska/packages/pdt/x86_64//bin/edg44-c-roseparse /tmp/petsc-U9YCMv/config.functions/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions PDT: Error parsing input file /tmp/petsc-U9YCMv/config.functions/conftest.c Trying Older PDT Rose parser based on EDG 3.3: /home/hills/seska/packages/pdt/x86_64//bin/roseparse /tmp/petsc-U9YCMv/config.functions/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions Skipping exit of compilation in EDG pos_st_catastrophe() PDT: Error parsing input file /tmp/petsc-U9YCMv/config.functions/conftest.c Error: Command(Executable) is -- Error: Full Command attempted is -- /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.functions/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Error: Compilation Failed Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -c -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Possible ERROR while running compiler: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.functions/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions PDT: Error: Couldn't create conftest.pdb: Trying the alternate PDT Rose parser based on EDG 4.4: /home/hills/seska/packages/pdt/x86_64//bin/edg44-c-roseparse /tmp/petsc-U9YCMv/config.functions/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions PDT: Error parsing input file /tmp/petsc-U9YCMv/config.functions/conftest.c Trying Older PDT Rose parser based on EDG 3.3: /home/hills/seska/packages/pdt/x86_64//bin/roseparse /tmp/petsc-U9YCMv/config.functions/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions Skipping exit of compilation in EDG pos_st_catastrophe() PDT: Error parsing input file /tmp/petsc-U9YCMv/config.functions/conftest.c Error: Command(Executable) is -- Error: Full Command attempted is -- /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.functions/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Error: Compilation Failed Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -c -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue ret = 256 error message = {"/tmp/petsc-U9YCMv/config.functions/conftest.c", line 13: catastrophic error: #error directive: "Cannot check sysinfo without special headers" # error "Cannot check sysinfo without special headers" ^ 1 catastrophic error detected in the compilation of "/tmp/petsc-U9YCMv/config.functions/conftest.c". Compilation terminated. "/tmp/petsc-U9YCMv/config.functions/conftest.c", line 13: catastrophic error: #error directive: "Cannot check sysinfo without special headers" # error "Cannot check sysinfo without special headers" ^ terminate called after throwing an instance of 'rose_exception' what(): Errors in Processing: (frontend_failed) Aborted (core dumped) "/tmp/petsc-U9YCMv/config.functions/conftest.c", line 13: catastrophic error: #error directive: "Cannot check sysinfo without special headers" # error "Cannot check sysinfo without special headers" ^ "/tmp/petsc-U9YCMv/config.functions/conftest.c", line 13: error: extra text after expected end of preprocessing directive # error "Cannot check sysinfo without special headers" ^ terminate called after throwing an instance of 'rose_exception' what(): Errors in Processing: (frontend_failed) Aborted (core dumped) /tmp/petsc-U9YCMv/config.functions/conftest.c:13:4: error: #error "Cannot check sysinfo without special headers" make: *** [all] Error 1 } Source: #include "confdefs.h" #include "conffix.h" #ifdef HAVE_LINUX_KERNEL_H # include # include # ifdef HAVE_SYS_SYSINFO_H # include # endif #elif defined(HAVE_SYS_SYSTEMINFO_H) # include #else # error "Cannot check sysinfo without special headers" #endif int main() { char buf[10]; long count=10; sysinfo(1, buf, count); ; return 0; } Compile failed inside link ================================================================================ TEST checkVPrintf from config.functions(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/functions.py:125) TESTING: checkVPrintf from config.functions(config/BuildSystem/config/functions.py:125) Checks whether vprintf requires a char * last argument, and if it does defines HAVE_VPRINTF_CHAR Checking for function vprintf sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.functions/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.functions/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Possible ERROR while running compiler: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.functions/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.functions/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb error message = {/tmp/petsc-U9YCMv/config.functions/conftest.c:10:6: warning: conflicting types for built-in function ‘vprintf’ [enabled by default] } Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char vprintf(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char vprintf(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_vprintf) || defined (__stub___vprintf) choke me #else vprintf(); #endif ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Defined "HAVE_VPRINTF" to "1" sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.functions/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.functions/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include int main() { va_list Argp; vprintf( "%d", Argp ); ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt ================================================================================ TEST checkVFPrintf from config.functions(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/functions.py:132) TESTING: checkVFPrintf from config.functions(config/BuildSystem/config/functions.py:132) Checks whether vfprintf requires a char * last argument, and if it does defines HAVE_VFPRINTF_CHAR Checking for function vfprintf sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.functions/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.functions/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Possible ERROR while running compiler: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.functions/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.functions/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb error message = {/tmp/petsc-U9YCMv/config.functions/conftest.c:10:6: warning: conflicting types for built-in function ‘vfprintf’ [enabled by default] } Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char vfprintf(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char vfprintf(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_vfprintf) || defined (__stub___vfprintf) choke me #else vfprintf(); #endif ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Defined "HAVE_VFPRINTF" to "1" sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.functions/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.functions/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include int main() { va_list Argp; vfprintf(stdout, "%d", Argp ); ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt ================================================================================ TEST checkVSNPrintf from config.functions(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/functions.py:139) TESTING: checkVSNPrintf from config.functions(config/BuildSystem/config/functions.py:139) Checks whether vsnprintf requires a char * last argument, and if it does defines HAVE_VSNPRINTF_CHAR Checking for function _vsnprintf sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.functions/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.functions/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char _vsnprintf(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _vsnprintf(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub__vsnprintf) || defined (__stub____vsnprintf) choke me #else _vsnprintf(); #endif ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.functions/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.functions/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Possible ERROR while running linker: /tmp/petsc-U9YCMv/config.functions/conftest.o: In function `main': /tmp/petsc-U9YCMv/config.functions/conftest.c:20: undefined reference to `_vsnprintf' collect2: error: ld returned 1 exit status /tmp/petsc-U9YCMv/config.functions/conftest.o: In function `main': /tmp/petsc-U9YCMv/config.functions/conftest.c:20: undefined reference to `_vsnprintf' collect2: error: ld returned 1 exit status make: *** [all] Error 1 output: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.functions/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.functions/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt ret = 256 error message = {/tmp/petsc-U9YCMv/config.functions/conftest.o: In function `main': /tmp/petsc-U9YCMv/config.functions/conftest.c:20: undefined reference to `_vsnprintf' collect2: error: ld returned 1 exit status /tmp/petsc-U9YCMv/config.functions/conftest.o: In function `main': /tmp/petsc-U9YCMv/config.functions/conftest.c:20: undefined reference to `_vsnprintf' collect2: error: ld returned 1 exit status make: *** [all] Error 1 } Pushing language C Popping language C in tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char _vsnprintf(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _vsnprintf(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub__vsnprintf) || defined (__stub____vsnprintf) choke me #else _vsnprintf(); #endif ; return 0; } Checking for function vsnprintf sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.functions/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.functions/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Possible ERROR while running compiler: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.functions/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.functions/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb error message = {/tmp/petsc-U9YCMv/config.functions/conftest.c:10:6: warning: conflicting types for built-in function ‘vsnprintf’ [enabled by default] } Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char vsnprintf(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char vsnprintf(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_vsnprintf) || defined (__stub___vsnprintf) choke me #else vsnprintf(); #endif ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Defined "HAVE_VSNPRINTF" to "1" sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.functions/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.functions/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include int main() { va_list Argp;char str[6]; vsnprintf(str,5, "%d", Argp ); ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt ================================================================================ TEST checkNanosleep from config.functions(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/functions.py:183) TESTING: checkNanosleep from config.functions(config/BuildSystem/config/functions.py:183) Check for functional nanosleep() - as time.h behaves differently for different compiler flags - like -std=c89 sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.functions/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.functions/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { struct timespec tp; tp.tv_sec = 0; tp.tv_nsec = (long)(1e9); nanosleep(&tp,0); ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Defined "HAVE_NANOSLEEP" to "1" ================================================================================ TEST checkSignalHandlerType from config.functions(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/functions.py:159) TESTING: checkSignalHandlerType from config.functions(config/BuildSystem/config/functions.py:159) Checks the type of C++ signals handlers, and defines SIGNAL_CAST to the correct value Pushing language Cxx sh: mpicxx -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g -fPIC /tmp/petsc-U9YCMv/config.functions/conftest.cc Executing: mpicxx -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g -fPIC /tmp/petsc-U9YCMv/config.functions/conftest.cc sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include static void myhandler(int sig) {} int main() { signal(SIGFPE,myhandler); ; return 0; } Pushing language CXX Popping language CXX sh: mpicxx -o /tmp/petsc-U9YCMv/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: mpicxx -o /tmp/petsc-U9YCMv/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Defined "SIGNAL_CAST" to " " Popping language Cxx ================================================================================ TEST checkFreeReturnType from config.functions(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/functions.py:169) TESTING: checkFreeReturnType from config.functions(config/BuildSystem/config/functions.py:169) Checks whether free returns void or int, and defines HAVE_FREE_RETURN_INT sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.functions/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions PDT: Error: Couldn't create conftest.pdb: Trying the alternate PDT Rose parser based on EDG 4.4: /home/hills/seska/packages/pdt/x86_64//bin/edg44-c-roseparse /tmp/petsc-U9YCMv/config.functions/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions PDT: Error parsing input file /tmp/petsc-U9YCMv/config.functions/conftest.c Trying Older PDT Rose parser based on EDG 3.3: /home/hills/seska/packages/pdt/x86_64//bin/roseparse /tmp/petsc-U9YCMv/config.functions/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions PDT: Error parsing input file /tmp/petsc-U9YCMv/config.functions/conftest.c Error: Command(Executable) is -- Error: Full Command attempted is -- /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.functions/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Error: Compilation Failed Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -c -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Possible ERROR while running compiler: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.functions/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions PDT: Error: Couldn't create conftest.pdb: Trying the alternate PDT Rose parser based on EDG 4.4: /home/hills/seska/packages/pdt/x86_64//bin/edg44-c-roseparse /tmp/petsc-U9YCMv/config.functions/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions PDT: Error parsing input file /tmp/petsc-U9YCMv/config.functions/conftest.c Trying Older PDT Rose parser based on EDG 3.3: /home/hills/seska/packages/pdt/x86_64//bin/roseparse /tmp/petsc-U9YCMv/config.functions/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions PDT: Error parsing input file /tmp/petsc-U9YCMv/config.functions/conftest.c Error: Command(Executable) is -- Error: Full Command attempted is -- /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.functions/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Error: Compilation Failed Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -c -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue ret = 256 error message = {"/tmp/petsc-U9YCMv/config.functions/conftest.c", line 6: warning: variable "p" is used before its value is set int ierr; void *p; ierr = free(p); return 0; ^ "/tmp/petsc-U9YCMv/config.functions/conftest.c", line 6: error: a value of type "void" cannot be assigned to an entity of type "int" int ierr; void *p; ierr = free(p); return 0; ^ "/tmp/petsc-U9YCMv/config.functions/conftest.c", line 8: warning: statement is unreachable return 0; ^ "/tmp/petsc-U9YCMv/config.functions/conftest.c", line 6: warning: variable "ierr" was set but never used int ierr; void *p; ierr = free(p); return 0; ^ 1 error detected in the compilation of "/tmp/petsc-U9YCMv/config.functions/conftest.c". "/tmp/petsc-U9YCMv/config.functions/conftest.c", line 6: warning: variable "p" is used before its value is set int ierr; void *p; ierr = free(p); return 0; ^ "/tmp/petsc-U9YCMv/config.functions/conftest.c", line 6: error: a value of type "void" cannot be assigned to an entity of type "int" int ierr; void *p; ierr = free(p); return 0; ^ "/tmp/petsc-U9YCMv/config.functions/conftest.c", line 8: warning: statement is unreachable return 0; ^ "/tmp/petsc-U9YCMv/config.functions/conftest.c", line 6: warning: variable "ierr" was set but never used int ierr; void *p; ierr = free(p); return 0; ^ terminate called after throwing an instance of 'rose_exception' what(): Errors in Processing: (frontend_failed) Aborted (core dumped) "/tmp/petsc-U9YCMv/config.functions/conftest.c", line 6: warning: variable "p" is used before its value is set int ierr; void *p; ierr = free(p); return 0; ^ "/tmp/petsc-U9YCMv/config.functions/conftest.c", line 6: error: a value of type "void" cannot be assigned to an entity of type "int" int ierr; void *p; ierr = free(p); return 0; ^ "/tmp/petsc-U9YCMv/config.functions/conftest.c", line 8: warning: statement is unreachable return 0; ^ "/tmp/petsc-U9YCMv/config.functions/conftest.c", line 6: warning: variable "ierr" was set but never used int ierr; void *p; ierr = free(p); return 0; ^ terminate called after throwing an instance of 'rose_exception' what(): Errors in Processing: (frontend_failed) Aborted (core dumped) /tmp/petsc-U9YCMv/config.functions/conftest.c: In function ‘main’: /tmp/petsc-U9YCMv/config.functions/conftest.c:6:25: error: void value not ignored as it ought to be make: *** [all] Error 1 } Source: #include "confdefs.h" #include "conffix.h" #include int main() { int ierr; void *p; ierr = free(p); return 0; ; return 0; } Compile failed inside link ================================================================================ TEST checkVariableArgumentLists from config.functions(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/functions.py:175) TESTING: checkVariableArgumentLists from config.functions(config/BuildSystem/config/functions.py:175) Checks whether the variable argument list functionality is working sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.functions/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.functions/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { va_list l1, l2; va_copy(l1, l2); return 0; ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Defined "HAVE_VA_COPY" to "1" ================================================================================ TEST check from config.functions(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function rand sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.functions/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.functions/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char rand(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char rand(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_rand) || defined (__stub___rand) choke me #else rand(); #endif ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Defined "HAVE_RAND" to "1" ================================================================================ TEST check from config.functions(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function getdomainname sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.functions/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.functions/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Error: Compilation Failed Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Looking for file: conftest.o Possible ERROR while running compiler: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.functions/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.functions/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Error: Compilation Failed Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Looking for file: conftest.o error message = {/tmp/petsc-U9YCMv/config.functions/conftest.c:10:6: error: conflicting types for ‘getdomainname’ In file included from /home/hills/seska/packages/tau/include/Profile/Profiler.h:29:0, from conftest.inst.c:1: /usr/include/unistd.h:919:12: note: previous declaration of ‘getdomainname’ was here } Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char getdomainname(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char getdomainname(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_getdomainname) || defined (__stub___getdomainname) choke me #else getdomainname(); #endif ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Defined "HAVE_GETDOMAINNAME" to "1" ================================================================================ TEST check from config.functions(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function _sleep sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.functions/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.functions/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char _sleep(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _sleep(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub__sleep) || defined (__stub____sleep) choke me #else _sleep(); #endif ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.functions/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.functions/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Possible ERROR while running linker: /tmp/petsc-U9YCMv/config.functions/conftest.o: In function `main': /tmp/petsc-U9YCMv/config.functions/conftest.c:20: undefined reference to `_sleep' collect2: error: ld returned 1 exit status /tmp/petsc-U9YCMv/config.functions/conftest.o: In function `main': /tmp/petsc-U9YCMv/config.functions/conftest.c:20: undefined reference to `_sleep' collect2: error: ld returned 1 exit status make: *** [all] Error 1 output: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.functions/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.functions/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt ret = 256 error message = {/tmp/petsc-U9YCMv/config.functions/conftest.o: In function `main': /tmp/petsc-U9YCMv/config.functions/conftest.c:20: undefined reference to `_sleep' collect2: error: ld returned 1 exit status /tmp/petsc-U9YCMv/config.functions/conftest.o: In function `main': /tmp/petsc-U9YCMv/config.functions/conftest.c:20: undefined reference to `_sleep' collect2: error: ld returned 1 exit status make: *** [all] Error 1 } Pushing language C Popping language C in tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char _sleep(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _sleep(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub__sleep) || defined (__stub____sleep) choke me #else _sleep(); #endif ; return 0; } ================================================================================ TEST check from config.functions(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function snprintf sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.functions/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.functions/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Possible ERROR while running compiler: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.functions/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.functions/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb error message = {/tmp/petsc-U9YCMv/config.functions/conftest.c:10:6: warning: conflicting types for built-in function ‘snprintf’ [enabled by default] } Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char snprintf(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char snprintf(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_snprintf) || defined (__stub___snprintf) choke me #else snprintf(); #endif ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Defined "HAVE_SNPRINTF" to "1" ================================================================================ TEST check from config.functions(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function realpath sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.functions/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.functions/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char realpath(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char realpath(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_realpath) || defined (__stub___realpath) choke me #else realpath(); #endif ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Defined "HAVE_REALPATH" to "1" ================================================================================ TEST check from config.functions(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function dlsym sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.functions/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.functions/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char dlsym(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char dlsym(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_dlsym) || defined (__stub___dlsym) choke me #else dlsym(); #endif ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Defined "HAVE_DLSYM" to "1" ================================================================================ TEST check from config.functions(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function bzero sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.functions/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.functions/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Error: Compilation Failed Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Looking for file: conftest.o Possible ERROR while running compiler: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.functions/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.functions/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Error: Compilation Failed Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Looking for file: conftest.o error message = {/tmp/petsc-U9YCMv/config.functions/conftest.c:10:6: error: conflicting types for ‘bzero’ /tmp/petsc-U9YCMv/config.functions/conftest.c:10:6: warning: conflicting types for built-in function ‘bzero’ [enabled by default] } Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char bzero(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char bzero(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_bzero) || defined (__stub___bzero) choke me #else bzero(); #endif ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Defined "HAVE_BZERO" to "1" ================================================================================ TEST check from config.functions(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function _getcwd sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.functions/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.functions/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char _getcwd(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _getcwd(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub__getcwd) || defined (__stub____getcwd) choke me #else _getcwd(); #endif ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.functions/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.functions/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Possible ERROR while running linker: /tmp/petsc-U9YCMv/config.functions/conftest.o: In function `main': /tmp/petsc-U9YCMv/config.functions/conftest.c:20: undefined reference to `_getcwd' collect2: error: ld returned 1 exit status /tmp/petsc-U9YCMv/config.functions/conftest.o: In function `main': /tmp/petsc-U9YCMv/config.functions/conftest.c:20: undefined reference to `_getcwd' collect2: error: ld returned 1 exit status make: *** [all] Error 1 output: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.functions/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.functions/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt ret = 256 error message = {/tmp/petsc-U9YCMv/config.functions/conftest.o: In function `main': /tmp/petsc-U9YCMv/config.functions/conftest.c:20: undefined reference to `_getcwd' collect2: error: ld returned 1 exit status /tmp/petsc-U9YCMv/config.functions/conftest.o: In function `main': /tmp/petsc-U9YCMv/config.functions/conftest.c:20: undefined reference to `_getcwd' collect2: error: ld returned 1 exit status make: *** [all] Error 1 } Pushing language C Popping language C in tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char _getcwd(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _getcwd(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub__getcwd) || defined (__stub____getcwd) choke me #else _getcwd(); #endif ; return 0; } ================================================================================ TEST check from config.functions(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function getwd sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.functions/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.functions/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Error: Compilation Failed Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Looking for file: conftest.o Possible ERROR while running compiler: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.functions/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.functions/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Error: Compilation Failed Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Looking for file: conftest.o error message = {/tmp/petsc-U9YCMv/config.functions/conftest.c:10:6: error: conflicting types for ‘getwd’ In file included from /home/hills/seska/packages/tau/include/Profile/Profiler.h:29:0, from conftest.inst.c:1: /usr/include/unistd.h:525:14: note: previous declaration of ‘getwd’ was here } Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char getwd(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char getwd(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_getwd) || defined (__stub___getwd) choke me #else getwd(); #endif ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Defined "HAVE_GETWD" to "1" ================================================================================ TEST check from config.functions(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function uname sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.functions/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.functions/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char uname(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char uname(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_uname) || defined (__stub___uname) choke me #else uname(); #endif ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Defined "HAVE_UNAME" to "1" ================================================================================ TEST check from config.functions(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function _lseek sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.functions/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.functions/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char _lseek(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _lseek(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub__lseek) || defined (__stub____lseek) choke me #else _lseek(); #endif ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.functions/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.functions/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Possible ERROR while running linker: /tmp/petsc-U9YCMv/config.functions/conftest.o: In function `main': /tmp/petsc-U9YCMv/config.functions/conftest.c:20: undefined reference to `_lseek' collect2: error: ld returned 1 exit status /tmp/petsc-U9YCMv/config.functions/conftest.o: In function `main': /tmp/petsc-U9YCMv/config.functions/conftest.c:20: undefined reference to `_lseek' collect2: error: ld returned 1 exit status make: *** [all] Error 1 output: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.functions/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.functions/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt ret = 256 error message = {/tmp/petsc-U9YCMv/config.functions/conftest.o: In function `main': /tmp/petsc-U9YCMv/config.functions/conftest.c:20: undefined reference to `_lseek' collect2: error: ld returned 1 exit status /tmp/petsc-U9YCMv/config.functions/conftest.o: In function `main': /tmp/petsc-U9YCMv/config.functions/conftest.c:20: undefined reference to `_lseek' collect2: error: ld returned 1 exit status make: *** [all] Error 1 } Pushing language C Popping language C in tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char _lseek(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _lseek(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub__lseek) || defined (__stub____lseek) choke me #else _lseek(); #endif ; return 0; } ================================================================================ TEST check from config.functions(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function sleep sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.functions/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.functions/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Error: Compilation Failed Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Looking for file: conftest.o Possible ERROR while running compiler: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.functions/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.functions/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Error: Compilation Failed Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Looking for file: conftest.o error message = {/tmp/petsc-U9YCMv/config.functions/conftest.c:10:6: error: conflicting types for ‘sleep’ In file included from /home/hills/seska/packages/tau/include/Profile/Profiler.h:29:0, from conftest.inst.c:1: /usr/include/unistd.h:444:21: note: previous declaration of ‘sleep’ was here } Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char sleep(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char sleep(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_sleep) || defined (__stub___sleep) choke me #else sleep(); #endif ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Defined "HAVE_SLEEP" to "1" ================================================================================ TEST check from config.functions(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function _access sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.functions/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.functions/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char _access(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _access(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub__access) || defined (__stub____access) choke me #else _access(); #endif ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.functions/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.functions/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Possible ERROR while running linker: /tmp/petsc-U9YCMv/config.functions/conftest.o: In function `main': /tmp/petsc-U9YCMv/config.functions/conftest.c:20: undefined reference to `_access' collect2: error: ld returned 1 exit status /tmp/petsc-U9YCMv/config.functions/conftest.o: In function `main': /tmp/petsc-U9YCMv/config.functions/conftest.c:20: undefined reference to `_access' collect2: error: ld returned 1 exit status make: *** [all] Error 1 output: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.functions/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.functions/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt ret = 256 error message = {/tmp/petsc-U9YCMv/config.functions/conftest.o: In function `main': /tmp/petsc-U9YCMv/config.functions/conftest.c:20: undefined reference to `_access' collect2: error: ld returned 1 exit status /tmp/petsc-U9YCMv/config.functions/conftest.o: In function `main': /tmp/petsc-U9YCMv/config.functions/conftest.c:20: undefined reference to `_access' collect2: error: ld returned 1 exit status make: *** [all] Error 1 } Pushing language C Popping language C in tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char _access(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _access(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub__access) || defined (__stub____access) choke me #else _access(); #endif ; return 0; } ================================================================================ TEST check from config.functions(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function lseek sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.functions/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.functions/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Error: Compilation Failed Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Looking for file: conftest.o Possible ERROR while running compiler: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.functions/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.functions/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Error: Compilation Failed Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Looking for file: conftest.o error message = {/tmp/petsc-U9YCMv/config.functions/conftest.c:10:6: error: conflicting types for ‘lseek’ In file included from /home/hills/seska/packages/tau/include/Profile/Profiler.h:29:0, from conftest.inst.c:1: /usr/include/unistd.h:334:16: note: previous declaration of ‘lseek’ was here } Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char lseek(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char lseek(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_lseek) || defined (__stub___lseek) choke me #else lseek(); #endif ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Defined "HAVE_LSEEK" to "1" ================================================================================ TEST check from config.functions(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function usleep sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.functions/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.functions/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Error: Compilation Failed Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Looking for file: conftest.o Possible ERROR while running compiler: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.functions/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.functions/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Error: Compilation Failed Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Looking for file: conftest.o error message = {/tmp/petsc-U9YCMv/config.functions/conftest.c:10:6: error: conflicting types for ‘usleep’ In file included from /home/hills/seska/packages/tau/include/Profile/Profiler.h:29:0, from conftest.inst.c:1: /usr/include/unistd.h:460:12: note: previous declaration of ‘usleep’ was here } Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char usleep(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char usleep(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_usleep) || defined (__stub___usleep) choke me #else usleep(); #endif ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Defined "HAVE_USLEEP" to "1" ================================================================================ TEST check from config.functions(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function _intel_fast_memset sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.functions/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.functions/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char _intel_fast_memset(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _intel_fast_memset(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub__intel_fast_memset) || defined (__stub____intel_fast_memset) choke me #else _intel_fast_memset(); #endif ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.functions/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.functions/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Possible ERROR while running linker: /tmp/petsc-U9YCMv/config.functions/conftest.o: In function `main': /tmp/petsc-U9YCMv/config.functions/conftest.c:20: undefined reference to `_intel_fast_memset' collect2: error: ld returned 1 exit status /tmp/petsc-U9YCMv/config.functions/conftest.o: In function `main': /tmp/petsc-U9YCMv/config.functions/conftest.c:20: undefined reference to `_intel_fast_memset' collect2: error: ld returned 1 exit status make: *** [all] Error 1 output: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.functions/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.functions/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt ret = 256 error message = {/tmp/petsc-U9YCMv/config.functions/conftest.o: In function `main': /tmp/petsc-U9YCMv/config.functions/conftest.c:20: undefined reference to `_intel_fast_memset' collect2: error: ld returned 1 exit status /tmp/petsc-U9YCMv/config.functions/conftest.o: In function `main': /tmp/petsc-U9YCMv/config.functions/conftest.c:20: undefined reference to `_intel_fast_memset' collect2: error: ld returned 1 exit status make: *** [all] Error 1 } Pushing language C Popping language C in tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char _intel_fast_memset(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _intel_fast_memset(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub__intel_fast_memset) || defined (__stub____intel_fast_memset) choke me #else _intel_fast_memset(); #endif ; return 0; } ================================================================================ TEST check from config.functions(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function dlclose sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.functions/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.functions/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char dlclose(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char dlclose(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_dlclose) || defined (__stub___dlclose) choke me #else dlclose(); #endif ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Defined "HAVE_DLCLOSE" to "1" ================================================================================ TEST check from config.functions(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function gethostname sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.functions/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.functions/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Error: Compilation Failed Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Looking for file: conftest.o Possible ERROR while running compiler: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.functions/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.functions/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Error: Compilation Failed Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Looking for file: conftest.o error message = {/tmp/petsc-U9YCMv/config.functions/conftest.c:10:6: error: conflicting types for ‘gethostname’ In file included from /home/hills/seska/packages/tau/include/Profile/Profiler.h:29:0, from conftest.inst.c:1: /usr/include/unistd.h:901:12: note: previous declaration of ‘gethostname’ was here } Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char gethostname(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char gethostname(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_gethostname) || defined (__stub___gethostname) choke me #else gethostname(); #endif ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Defined "HAVE_GETHOSTNAME" to "1" ================================================================================ TEST check from config.functions(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function clock sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.functions/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.functions/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char clock(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char clock(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_clock) || defined (__stub___clock) choke me #else clock(); #endif ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Defined "HAVE_CLOCK" to "1" ================================================================================ TEST check from config.functions(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function get_nprocs sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.functions/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.functions/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char get_nprocs(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char get_nprocs(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_get_nprocs) || defined (__stub___get_nprocs) choke me #else get_nprocs(); #endif ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Defined "HAVE_GET_NPROCS" to "1" ================================================================================ TEST check from config.functions(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function access sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.functions/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.functions/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Error: Compilation Failed Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Looking for file: conftest.o Possible ERROR while running compiler: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.functions/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.functions/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Error: Compilation Failed Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Looking for file: conftest.o error message = {/tmp/petsc-U9YCMv/config.functions/conftest.c:10:6: error: conflicting types for ‘access’ In file included from /home/hills/seska/packages/tau/include/Profile/Profiler.h:29:0, from conftest.inst.c:1: /usr/include/unistd.h:287:12: note: previous declaration of ‘access’ was here } Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char access(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char access(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_access) || defined (__stub___access) choke me #else access(); #endif ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Defined "HAVE_ACCESS" to "1" ================================================================================ TEST check from config.functions(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function _snprintf sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.functions/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.functions/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char _snprintf(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _snprintf(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub__snprintf) || defined (__stub____snprintf) choke me #else _snprintf(); #endif ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.functions/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.functions/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Possible ERROR while running linker: /tmp/petsc-U9YCMv/config.functions/conftest.o: In function `main': /tmp/petsc-U9YCMv/config.functions/conftest.c:20: undefined reference to `_snprintf' collect2: error: ld returned 1 exit status /tmp/petsc-U9YCMv/config.functions/conftest.o: In function `main': /tmp/petsc-U9YCMv/config.functions/conftest.c:20: undefined reference to `_snprintf' collect2: error: ld returned 1 exit status make: *** [all] Error 1 output: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.functions/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.functions/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt ret = 256 error message = {/tmp/petsc-U9YCMv/config.functions/conftest.o: In function `main': /tmp/petsc-U9YCMv/config.functions/conftest.c:20: undefined reference to `_snprintf' collect2: error: ld returned 1 exit status /tmp/petsc-U9YCMv/config.functions/conftest.o: In function `main': /tmp/petsc-U9YCMv/config.functions/conftest.c:20: undefined reference to `_snprintf' collect2: error: ld returned 1 exit status make: *** [all] Error 1 } Pushing language C Popping language C in tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char _snprintf(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _snprintf(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub__snprintf) || defined (__stub____snprintf) choke me #else _snprintf(); #endif ; return 0; } ================================================================================ TEST check from config.functions(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function dlerror sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.functions/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.functions/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char dlerror(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char dlerror(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_dlerror) || defined (__stub___dlerror) choke me #else dlerror(); #endif ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Defined "HAVE_DLERROR" to "1" ================================================================================ TEST check from config.functions(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function mkstemp sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.functions/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.functions/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char mkstemp(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char mkstemp(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_mkstemp) || defined (__stub___mkstemp) choke me #else mkstemp(); #endif ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Defined "HAVE_MKSTEMP" to "1" ================================================================================ TEST check from config.functions(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function fork sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.functions/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.functions/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Error: Compilation Failed Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Looking for file: conftest.o Possible ERROR while running compiler: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.functions/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.functions/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Error: Compilation Failed Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Looking for file: conftest.o error message = {/tmp/petsc-U9YCMv/config.functions/conftest.c:10:6: error: conflicting types for ‘tau_fork’ In file included from conftest.inst.c:1:0: /home/hills/seska/packages/tau/include/Profile/Profiler.h:37:7: note: previous declaration of ‘tau_fork’ was here /tmp/petsc-U9YCMv/config.functions/conftest.c:10:6: warning: conflicting types for built-in function ‘fork’ [enabled by default] } Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char fork(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char fork(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_fork) || defined (__stub___fork) choke me #else fork(); #endif ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Defined "HAVE_FORK" to "1" ================================================================================ TEST check from config.functions(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function getpagesize sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.functions/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.functions/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Error: Compilation Failed Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Looking for file: conftest.o Possible ERROR while running compiler: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.functions/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.functions/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Error: Compilation Failed Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Looking for file: conftest.o error message = {/tmp/petsc-U9YCMv/config.functions/conftest.c:10:6: error: conflicting types for ‘getpagesize’ In file included from /home/hills/seska/packages/tau/include/Profile/Profiler.h:29:0, from conftest.inst.c:1: /usr/include/unistd.h:1000:12: note: previous declaration of ‘getpagesize’ was here } Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char getpagesize(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char getpagesize(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_getpagesize) || defined (__stub___getpagesize) choke me #else getpagesize(); #endif ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Defined "HAVE_GETPAGESIZE" to "1" ================================================================================ TEST check from config.functions(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function sbreak sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.functions/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.functions/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char sbreak(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char sbreak(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_sbreak) || defined (__stub___sbreak) choke me #else sbreak(); #endif ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.functions/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.functions/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Possible ERROR while running linker: /tmp/petsc-U9YCMv/config.functions/conftest.o: In function `main': /tmp/petsc-U9YCMv/config.functions/conftest.c:20: undefined reference to `sbreak' collect2: error: ld returned 1 exit status /tmp/petsc-U9YCMv/config.functions/conftest.o: In function `main': /tmp/petsc-U9YCMv/config.functions/conftest.c:20: undefined reference to `sbreak' collect2: error: ld returned 1 exit status make: *** [all] Error 1 output: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.functions/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.functions/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt ret = 256 error message = {/tmp/petsc-U9YCMv/config.functions/conftest.o: In function `main': /tmp/petsc-U9YCMv/config.functions/conftest.c:20: undefined reference to `sbreak' collect2: error: ld returned 1 exit status /tmp/petsc-U9YCMv/config.functions/conftest.o: In function `main': /tmp/petsc-U9YCMv/config.functions/conftest.c:20: undefined reference to `sbreak' collect2: error: ld returned 1 exit status make: *** [all] Error 1 } Pushing language C Popping language C in tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char sbreak(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char sbreak(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_sbreak) || defined (__stub___sbreak) choke me #else sbreak(); #endif ; return 0; } ================================================================================ TEST check from config.functions(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function memalign sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.functions/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.functions/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char memalign(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char memalign(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_memalign) || defined (__stub___memalign) choke me #else memalign(); #endif ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Defined "HAVE_MEMALIGN" to "1" ================================================================================ TEST check from config.functions(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function sigset sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.functions/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.functions/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char sigset(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char sigset(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_sigset) || defined (__stub___sigset) choke me #else sigset(); #endif ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Defined "HAVE_SIGSET" to "1" ================================================================================ TEST check from config.functions(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function _fullpath sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.functions/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.functions/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char _fullpath(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _fullpath(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub__fullpath) || defined (__stub____fullpath) choke me #else _fullpath(); #endif ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.functions/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.functions/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Possible ERROR while running linker: /tmp/petsc-U9YCMv/config.functions/conftest.o: In function `main': /tmp/petsc-U9YCMv/config.functions/conftest.c:20: undefined reference to `_fullpath' collect2: error: ld returned 1 exit status /tmp/petsc-U9YCMv/config.functions/conftest.o: In function `main': /tmp/petsc-U9YCMv/config.functions/conftest.c:20: undefined reference to `_fullpath' collect2: error: ld returned 1 exit status make: *** [all] Error 1 output: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.functions/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.functions/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt ret = 256 error message = {/tmp/petsc-U9YCMv/config.functions/conftest.o: In function `main': /tmp/petsc-U9YCMv/config.functions/conftest.c:20: undefined reference to `_fullpath' collect2: error: ld returned 1 exit status /tmp/petsc-U9YCMv/config.functions/conftest.o: In function `main': /tmp/petsc-U9YCMv/config.functions/conftest.c:20: undefined reference to `_fullpath' collect2: error: ld returned 1 exit status make: *** [all] Error 1 } Pushing language C Popping language C in tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char _fullpath(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _fullpath(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub__fullpath) || defined (__stub____fullpath) choke me #else _fullpath(); #endif ; return 0; } ================================================================================ TEST check from config.functions(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function getcwd sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.functions/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.functions/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Error: Compilation Failed Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Looking for file: conftest.o Possible ERROR while running compiler: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.functions/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.functions/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Error: Compilation Failed Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Looking for file: conftest.o error message = {/tmp/petsc-U9YCMv/config.functions/conftest.c:10:6: error: conflicting types for ‘getcwd’ In file included from /home/hills/seska/packages/tau/include/Profile/Profiler.h:29:0, from conftest.inst.c:1: /usr/include/unistd.h:511:14: note: previous declaration of ‘getcwd’ was here } Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char getcwd(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char getcwd(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_getcwd) || defined (__stub___getcwd) choke me #else getcwd(); #endif ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Defined "HAVE_GETCWD" to "1" ================================================================================ TEST check from config.functions(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function gethostbyname sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.functions/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.functions/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char gethostbyname(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char gethostbyname(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_gethostbyname) || defined (__stub___gethostbyname) choke me #else gethostbyname(); #endif ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Defined "HAVE_GETHOSTBYNAME" to "1" ================================================================================ TEST check from config.functions(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function gettimeofday sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.functions/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.functions/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char gettimeofday(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char gettimeofday(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_gettimeofday) || defined (__stub___gettimeofday) choke me #else gettimeofday(); #endif ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Defined "HAVE_GETTIMEOFDAY" to "1" ================================================================================ TEST check from config.functions(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function readlink sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.functions/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.functions/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Error: Compilation Failed Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Looking for file: conftest.o Possible ERROR while running compiler: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.functions/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.functions/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Error: Compilation Failed Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Looking for file: conftest.o error message = {/tmp/petsc-U9YCMv/config.functions/conftest.c:10:6: error: conflicting types for ‘readlink’ In file included from /home/hills/seska/packages/tau/include/Profile/Profiler.h:29:0, from conftest.inst.c:1: /usr/include/unistd.h:831:16: note: previous declaration of ‘readlink’ was here } Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char readlink(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char readlink(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_readlink) || defined (__stub___readlink) choke me #else readlink(); #endif ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Defined "HAVE_READLINK" to "1" ================================================================================ TEST check from config.functions(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function PXFGETARG sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.functions/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.functions/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char PXFGETARG(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char PXFGETARG(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_PXFGETARG) || defined (__stub___PXFGETARG) choke me #else PXFGETARG(); #endif ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.functions/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.functions/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Possible ERROR while running linker: /tmp/petsc-U9YCMv/config.functions/conftest.o: In function `main': /tmp/petsc-U9YCMv/config.functions/conftest.c:20: undefined reference to `PXFGETARG' collect2: error: ld returned 1 exit status /tmp/petsc-U9YCMv/config.functions/conftest.o: In function `main': /tmp/petsc-U9YCMv/config.functions/conftest.c:20: undefined reference to `PXFGETARG' collect2: error: ld returned 1 exit status make: *** [all] Error 1 output: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.functions/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.functions/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt ret = 256 error message = {/tmp/petsc-U9YCMv/config.functions/conftest.o: In function `main': /tmp/petsc-U9YCMv/config.functions/conftest.c:20: undefined reference to `PXFGETARG' collect2: error: ld returned 1 exit status /tmp/petsc-U9YCMv/config.functions/conftest.o: In function `main': /tmp/petsc-U9YCMv/config.functions/conftest.c:20: undefined reference to `PXFGETARG' collect2: error: ld returned 1 exit status make: *** [all] Error 1 } Pushing language C Popping language C in tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char PXFGETARG(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char PXFGETARG(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_PXFGETARG) || defined (__stub___PXFGETARG) choke me #else PXFGETARG(); #endif ; return 0; } ================================================================================ TEST check from config.functions(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function sigaction sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.functions/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.functions/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char sigaction(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char sigaction(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_sigaction) || defined (__stub___sigaction) choke me #else sigaction(); #endif ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Defined "HAVE_SIGACTION" to "1" ================================================================================ TEST check from config.functions(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function strcasecmp sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.functions/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.functions/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Error: Compilation Failed Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Looking for file: conftest.o Possible ERROR while running compiler: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.functions/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.functions/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Error: Compilation Failed Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Looking for file: conftest.o error message = {/tmp/petsc-U9YCMv/config.functions/conftest.c:10:6: error: conflicting types for ‘strcasecmp’ /tmp/petsc-U9YCMv/config.functions/conftest.c:10:6: warning: conflicting types for built-in function ‘strcasecmp’ [enabled by default] } Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char strcasecmp(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char strcasecmp(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_strcasecmp) || defined (__stub___strcasecmp) choke me #else strcasecmp(); #endif ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Defined "HAVE_STRCASECMP" to "1" ================================================================================ TEST check from config.functions(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function dlopen sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.functions/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.functions/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char dlopen(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char dlopen(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_dlopen) || defined (__stub___dlopen) choke me #else dlopen(); #endif ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Defined "HAVE_DLOPEN" to "1" ================================================================================ TEST check from config.functions(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function drand48 sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.functions/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.functions/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char drand48(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char drand48(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_drand48) || defined (__stub___drand48) choke me #else drand48(); #endif ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Defined "HAVE_DRAND48" to "1" ================================================================================ TEST check from config.functions(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function socket sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.functions/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.functions/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char socket(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char socket(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_socket) || defined (__stub___socket) choke me #else socket(); #endif ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Defined "HAVE_SOCKET" to "1" ================================================================================ TEST check from config.functions(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function memmove sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.functions/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.functions/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Error: Compilation Failed Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Looking for file: conftest.o Possible ERROR while running compiler: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.functions/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.functions/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Error: Compilation Failed Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Looking for file: conftest.o error message = {/tmp/petsc-U9YCMv/config.functions/conftest.c:10:6: error: conflicting types for ‘memmove’ /tmp/petsc-U9YCMv/config.functions/conftest.c:10:6: warning: conflicting types for built-in function ‘memmove’ [enabled by default] } Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char memmove(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char memmove(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_memmove) || defined (__stub___memmove) choke me #else memmove(); #endif ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Defined "HAVE_MEMMOVE" to "1" ================================================================================ TEST check from config.functions(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function signal sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.functions/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.functions/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char signal(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char signal(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_signal) || defined (__stub___signal) choke me #else signal(); #endif ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Defined "HAVE_SIGNAL" to "1" ================================================================================ TEST check from config.functions(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function popen sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.functions/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.functions/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char popen(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char popen(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_popen) || defined (__stub___popen) choke me #else popen(); #endif ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Defined "HAVE_POPEN" to "1" ================================================================================ TEST check from config.functions(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function getrusage sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.functions/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.functions/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char getrusage(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char getrusage(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_getrusage) || defined (__stub___getrusage) choke me #else getrusage(); #endif ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Defined "HAVE_GETRUSAGE" to "1" ================================================================================ TEST check from config.functions(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function times sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.functions/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.functions/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char times(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char times(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_times) || defined (__stub___times) choke me #else times(); #endif ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Defined "HAVE_TIMES" to "1" ================================================================================ TEST check from config.functions(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function _intel_fast_memcpy sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.functions/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.functions/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char _intel_fast_memcpy(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _intel_fast_memcpy(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub__intel_fast_memcpy) || defined (__stub____intel_fast_memcpy) choke me #else _intel_fast_memcpy(); #endif ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.functions/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.functions/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Possible ERROR while running linker: /tmp/petsc-U9YCMv/config.functions/conftest.o: In function `main': /tmp/petsc-U9YCMv/config.functions/conftest.c:20: undefined reference to `_intel_fast_memcpy' collect2: error: ld returned 1 exit status /tmp/petsc-U9YCMv/config.functions/conftest.o: In function `main': /tmp/petsc-U9YCMv/config.functions/conftest.c:20: undefined reference to `_intel_fast_memcpy' collect2: error: ld returned 1 exit status make: *** [all] Error 1 output: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.functions/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.functions/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt ret = 256 error message = {/tmp/petsc-U9YCMv/config.functions/conftest.o: In function `main': /tmp/petsc-U9YCMv/config.functions/conftest.c:20: undefined reference to `_intel_fast_memcpy' collect2: error: ld returned 1 exit status /tmp/petsc-U9YCMv/config.functions/conftest.o: In function `main': /tmp/petsc-U9YCMv/config.functions/conftest.c:20: undefined reference to `_intel_fast_memcpy' collect2: error: ld returned 1 exit status make: *** [all] Error 1 } Pushing language C Popping language C in tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char _intel_fast_memcpy(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _intel_fast_memcpy(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub__intel_fast_memcpy) || defined (__stub____intel_fast_memcpy) choke me #else _intel_fast_memcpy(); #endif ; return 0; } ================================================================================ TEST check from config.functions(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function time sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.functions/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.functions/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char time(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char time(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_time) || defined (__stub___time) choke me #else time(); #endif ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Defined "HAVE_TIME" to "1" ================================================================================ TEST check from config.functions(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function sysctlbyname sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.functions/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.functions/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char sysctlbyname(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char sysctlbyname(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_sysctlbyname) || defined (__stub___sysctlbyname) choke me #else sysctlbyname(); #endif ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.functions/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.functions/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Possible ERROR while running linker: /tmp/petsc-U9YCMv/config.functions/conftest.o: In function `main': /tmp/petsc-U9YCMv/config.functions/conftest.c:20: undefined reference to `sysctlbyname' collect2: error: ld returned 1 exit status /tmp/petsc-U9YCMv/config.functions/conftest.o: In function `main': /tmp/petsc-U9YCMv/config.functions/conftest.c:20: undefined reference to `sysctlbyname' collect2: error: ld returned 1 exit status make: *** [all] Error 1 output: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.functions/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.functions/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt ret = 256 error message = {/tmp/petsc-U9YCMv/config.functions/conftest.o: In function `main': /tmp/petsc-U9YCMv/config.functions/conftest.c:20: undefined reference to `sysctlbyname' collect2: error: ld returned 1 exit status /tmp/petsc-U9YCMv/config.functions/conftest.o: In function `main': /tmp/petsc-U9YCMv/config.functions/conftest.c:20: undefined reference to `sysctlbyname' collect2: error: ld returned 1 exit status make: *** [all] Error 1 } Pushing language C Popping language C in tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char sysctlbyname(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char sysctlbyname(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_sysctlbyname) || defined (__stub___sysctlbyname) choke me #else sysctlbyname(); #endif ; return 0; } ================================================================================ TEST check from config.functions(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function getpwuid sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.functions/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.functions/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char getpwuid(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char getpwuid(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_getpwuid) || defined (__stub___getpwuid) choke me #else getpwuid(); #endif ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Defined "HAVE_GETPWUID" to "1" ================================================================================ TEST check from config.functions(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function stricmp sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.functions/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.functions/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char stricmp(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char stricmp(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_stricmp) || defined (__stub___stricmp) choke me #else stricmp(); #endif ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.functions/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.functions/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Possible ERROR while running linker: /tmp/petsc-U9YCMv/config.functions/conftest.o: In function `main': /tmp/petsc-U9YCMv/config.functions/conftest.c:20: undefined reference to `stricmp' collect2: error: ld returned 1 exit status /tmp/petsc-U9YCMv/config.functions/conftest.o: In function `main': /tmp/petsc-U9YCMv/config.functions/conftest.c:20: undefined reference to `stricmp' collect2: error: ld returned 1 exit status make: *** [all] Error 1 output: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.functions/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.functions/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt ret = 256 error message = {/tmp/petsc-U9YCMv/config.functions/conftest.o: In function `main': /tmp/petsc-U9YCMv/config.functions/conftest.c:20: undefined reference to `stricmp' collect2: error: ld returned 1 exit status /tmp/petsc-U9YCMv/config.functions/conftest.o: In function `main': /tmp/petsc-U9YCMv/config.functions/conftest.c:20: undefined reference to `stricmp' collect2: error: ld returned 1 exit status make: *** [all] Error 1 } Pushing language C Popping language C in tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char stricmp(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char stricmp(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_stricmp) || defined (__stub___stricmp) choke me #else stricmp(); #endif ; return 0; } ================================================================================ TEST configureFPTrap from PETSc.utilities.FPTrap(/home/hills/seska-hills/packages/petsc-3.4.2/config/PETSc/utilities/FPTrap.py:27) TESTING: configureFPTrap from PETSc.utilities.FPTrap(config/PETSc/utilities/FPTrap.py:27) Checking the handling of floating point traps Checking for header: sigfpe.h sh: tau_cc.sh -E -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.headers /tmp/petsc-U9YCMv/config.headers/conftest.c Executing: tau_cc.sh -E -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.headers /tmp/petsc-U9YCMv/config.headers/conftest.c sh: # 1 "/tmp/petsc-U9YCMv/config.headers/conftest.c" # 1 "" # 1 "/tmp/petsc-U9YCMv/config.headers/conftest.c" # 1 "/tmp/petsc-U9YCMv/config.headers/confdefs.h" 1 # 2 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 # 1 "/tmp/petsc-U9YCMv/config.headers/conffix.h" 1 # 3 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 Possible ERROR while running preprocessor: /tmp/petsc-U9YCMv/config.headers/conftest.c:3:20: fatal error: sigfpe.h: No such file or directory compilation terminated. make: *** [all] Error 1 ret = 256 error message = {/tmp/petsc-U9YCMv/config.headers/conftest.c:3:20: fatal error: sigfpe.h: No such file or directory compilation terminated. make: *** [all] Error 1 } Source: #include "confdefs.h" #include "conffix.h" #include Checking for header: fpxcp.h sh: tau_cc.sh -E -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.headers /tmp/petsc-U9YCMv/config.headers/conftest.c Executing: tau_cc.sh -E -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.headers /tmp/petsc-U9YCMv/config.headers/conftest.c sh: # 1 "/tmp/petsc-U9YCMv/config.headers/conftest.c" # 1 "" # 1 "/tmp/petsc-U9YCMv/config.headers/conftest.c" # 1 "/tmp/petsc-U9YCMv/config.headers/confdefs.h" 1 # 2 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 # 1 "/tmp/petsc-U9YCMv/config.headers/conffix.h" 1 # 3 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 Possible ERROR while running preprocessor: /tmp/petsc-U9YCMv/config.headers/conftest.c:3:19: fatal error: fpxcp.h: No such file or directory compilation terminated. make: *** [all] Error 1 ret = 256 error message = {/tmp/petsc-U9YCMv/config.headers/conftest.c:3:19: fatal error: fpxcp.h: No such file or directory compilation terminated. make: *** [all] Error 1 } Source: #include "confdefs.h" #include "conffix.h" #include Checking for header: floatingpoint.h sh: tau_cc.sh -E -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.headers /tmp/petsc-U9YCMv/config.headers/conftest.c Executing: tau_cc.sh -E -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.headers /tmp/petsc-U9YCMv/config.headers/conftest.c sh: # 1 "/tmp/petsc-U9YCMv/config.headers/conftest.c" # 1 "" # 1 "/tmp/petsc-U9YCMv/config.headers/conftest.c" # 1 "/tmp/petsc-U9YCMv/config.headers/confdefs.h" 1 # 2 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 # 1 "/tmp/petsc-U9YCMv/config.headers/conffix.h" 1 # 3 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 Possible ERROR while running preprocessor: /tmp/petsc-U9YCMv/config.headers/conftest.c:3:27: fatal error: floatingpoint.h: No such file or directory compilation terminated. make: *** [all] Error 1 ret = 256 error message = {/tmp/petsc-U9YCMv/config.headers/conftest.c:3:27: fatal error: floatingpoint.h: No such file or directory compilation terminated. make: *** [all] Error 1 } Source: #include "confdefs.h" #include "conffix.h" #include ================================================================================ TEST configureMemorySize from PETSc.utilities.getResidentSetSize(/home/hills/seska-hills/packages/petsc-3.4.2/config/PETSc/utilities/getResidentSetSize.py:31) TESTING: configureMemorySize from PETSc.utilities.getResidentSetSize(config/PETSc/utilities/getResidentSetSize.py:31) Try to determine how to measure the memory usage Defined "USE_PROC_FOR_SIZE" to "1" Using /proc for PetscMemoryGetCurrentUsage() ================================================================================ TEST check_siginfo_t from config.types(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/types.py:46) TESTING: check_siginfo_t from config.types(config/BuildSystem/config/types.py:46) Checks if siginfo_t exists in signal.h. This check is for windows, and C89 check. Checking for type: siginfo_t All intermediate test results are stored in /tmp/petsc-U9YCMv/config.types sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.types/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -fPIC -g /tmp/petsc-U9YCMv/config.types/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.types/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -fPIC -g /tmp/petsc-U9YCMv/config.types/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.types/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.types Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.types/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.types -o /tmp/petsc-U9YCMv/config.types/conftest.o Error: Compilation Failed Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.types -o /tmp/petsc-U9YCMv/config.types/conftest.o Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g /tmp/petsc-U9YCMv/config.types/conftest.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/config.types -o /tmp/petsc-U9YCMv/config.types/conftest.o Looking for file: conftest.o Possible ERROR while running compiler: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.types/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.types Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.types/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.types -o /tmp/petsc-U9YCMv/config.types/conftest.o Error: Compilation Failed Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.types -o /tmp/petsc-U9YCMv/config.types/conftest.o Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g /tmp/petsc-U9YCMv/config.types/conftest.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/config.types -o /tmp/petsc-U9YCMv/config.types/conftest.o Looking for file: conftest.o error message = {/tmp/petsc-U9YCMv/config.types/conftest.c: In function ‘main’: /tmp/petsc-U9YCMv/config.types/conftest.c:13:1: error: unknown type name ‘siginfo_t’ } Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #include #endif int main() { siginfo_t a;; return 0; } siginfo_t found Defined "HAVE_SIGINFO_T" to "1" ================================================================================ TEST check__int64 from config.types(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/types.py:52) TESTING: check__int64 from config.types(config/BuildSystem/config/types.py:52) Checks if __int64 exists. This is primarily for windows. Checking for type: __int64 sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.types/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -fPIC -g /tmp/petsc-U9YCMv/config.types/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.types/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -fPIC -g /tmp/petsc-U9YCMv/config.types/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.types/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.types Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.types/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.types -o /tmp/petsc-U9YCMv/config.types/conftest.o Error: Compilation Failed Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.types -o /tmp/petsc-U9YCMv/config.types/conftest.o Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g /tmp/petsc-U9YCMv/config.types/conftest.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/config.types -o /tmp/petsc-U9YCMv/config.types/conftest.o Error: Compilation Failed Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -c -fPIC -g /tmp/petsc-U9YCMv/config.types/conftest.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/config.types -o /tmp/petsc-U9YCMv/config.types/conftest.o Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Possible ERROR while running compiler: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.types/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.types Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.types/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.types -o /tmp/petsc-U9YCMv/config.types/conftest.o Error: Compilation Failed Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.types -o /tmp/petsc-U9YCMv/config.types/conftest.o Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g /tmp/petsc-U9YCMv/config.types/conftest.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/config.types -o /tmp/petsc-U9YCMv/config.types/conftest.o Error: Compilation Failed Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -c -fPIC -g /tmp/petsc-U9YCMv/config.types/conftest.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/config.types -o /tmp/petsc-U9YCMv/config.types/conftest.o Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue ret = 256 error message = {/tmp/petsc-U9YCMv/config.types/conftest.c: In function ‘main’: /tmp/petsc-U9YCMv/config.types/conftest.c:13:1: error: unknown type name ‘__int64’ /tmp/petsc-U9YCMv/config.types/conftest.c: In function ‘main’: /tmp/petsc-U9YCMv/config.types/conftest.c:13:1: error: unknown type name ‘__int64’ make: *** [all] Error 1 } Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #endif int main() { __int64 a;; return 0; } __int64 found ================================================================================ TEST checkSizeTypes from config.types(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/types.py:58) TESTING: checkSizeTypes from config.types(config/BuildSystem/config/types.py:58) Checks for types associated with sizes, such as size_t. Checking for type: size_t sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.types/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -fPIC -g /tmp/petsc-U9YCMv/config.types/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.types/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -fPIC -g /tmp/petsc-U9YCMv/config.types/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.types/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.types Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.types/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.types -o /tmp/petsc-U9YCMv/config.types/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #endif int main() { size_t a;; return 0; } size_t found ================================================================================ TEST checkFileTypes from config.types(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/types.py:68) TESTING: checkFileTypes from config.types(config/BuildSystem/config/types.py:68) Checks for types associated with files, such as mode_t, off_t, etc. Checking for type: mode_t sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.types/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -fPIC -g /tmp/petsc-U9YCMv/config.types/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.types/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -fPIC -g /tmp/petsc-U9YCMv/config.types/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.types/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.types Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.types/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.types -o /tmp/petsc-U9YCMv/config.types/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #endif int main() { mode_t a;; return 0; } mode_t found Checking for type: off_t sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.types/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -fPIC -g /tmp/petsc-U9YCMv/config.types/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.types/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -fPIC -g /tmp/petsc-U9YCMv/config.types/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.types/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.types Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.types/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.types -o /tmp/petsc-U9YCMv/config.types/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #endif int main() { off_t a;; return 0; } off_t found ================================================================================ TEST checkIntegerTypes from config.types(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/types.py:63) TESTING: checkIntegerTypes from config.types(config/BuildSystem/config/types.py:63) Checks for types associated with integers, such as int32_t. Checking for type: int32_t sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.types/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -fPIC -g /tmp/petsc-U9YCMv/config.types/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.types/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -fPIC -g /tmp/petsc-U9YCMv/config.types/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.types/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.types Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.types/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.types -o /tmp/petsc-U9YCMv/config.types/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #endif int main() { int32_t a;; return 0; } int32_t found ================================================================================ TEST checkPID from config.types(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/types.py:74) TESTING: checkPID from config.types(config/BuildSystem/config/types.py:74) Checks for pid_t, and defines it if necessary Checking for type: pid_t sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.types/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -fPIC -g /tmp/petsc-U9YCMv/config.types/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.types/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -fPIC -g /tmp/petsc-U9YCMv/config.types/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.types/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.types Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.types/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.types -o /tmp/petsc-U9YCMv/config.types/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #endif int main() { pid_t a;; return 0; } pid_t found ================================================================================ TEST checkUID from config.types(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/types.py:78) TESTING: checkUID from config.types(config/BuildSystem/config/types.py:78) Checks for uid_t and gid_t, and defines them if necessary sh: tau_cc.sh -E -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/config.types /tmp/petsc-U9YCMv/config.types/conftest.c Executing: tau_cc.sh -E -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/config.types /tmp/petsc-U9YCMv/config.types/conftest.c sh: # 1 "/tmp/petsc-U9YCMv/config.types/conftest.c" # 1 "" # 1 "/tmp/petsc-U9YCMv/config.types/conftest.c" # 1 "/tmp/petsc-U9YCMv/config.types/confdefs.h" 1 # 2 "/tmp/petsc-U9YCMv/config.types/conftest.c" 2 # 1 "/tmp/petsc-U9YCMv/config.types/conffix.h" 1 # 3 "/tmp/petsc-U9YCMv/config.types/conftest.c" 2 # 1 "/usr/include/x86_64-linux-gnu/sys/types.h" 1 3 4 # 25 "/usr/include/x86_64-linux-gnu/sys/types.h" 3 4 # 1 "/usr/include/features.h" 1 3 4 # 341 "/usr/include/features.h" 3 4 # 1 "/usr/include/stdc-predef.h" 1 3 4 # 30 "/usr/include/stdc-predef.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/predefs.h" 1 3 4 # 31 "/usr/include/stdc-predef.h" 2 3 4 # 342 "/usr/include/features.h" 2 3 4 # 371 "/usr/include/features.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/sys/cdefs.h" 1 3 4 # 385 "/usr/include/x86_64-linux-gnu/sys/cdefs.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/wordsize.h" 1 3 4 # 386 "/usr/include/x86_64-linux-gnu/sys/cdefs.h" 2 3 4 # 372 "/usr/include/features.h" 2 3 4 # 395 "/usr/include/features.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/gnu/stubs.h" 1 3 4 # 10 "/usr/include/x86_64-linux-gnu/gnu/stubs.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/gnu/stubs-64.h" 1 3 4 # 11 "/usr/include/x86_64-linux-gnu/gnu/stubs.h" 2 3 4 # 396 "/usr/include/features.h" 2 3 4 # 26 "/usr/include/x86_64-linux-gnu/sys/types.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/types.h" 1 3 4 # 27 "/usr/include/x86_64-linux-gnu/bits/types.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/wordsize.h" 1 3 4 # 28 "/usr/include/x86_64-linux-gnu/bits/types.h" 2 3 4 typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; # 130 "/usr/include/x86_64-linux-gnu/bits/types.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/typesizes.h" 1 3 4 # 131 "/usr/include/x86_64-linux-gnu/bits/types.h" 2 3 4 typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned long int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef long int __suseconds_t; typedef int __daddr_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __fsword_t; typedef long int __ssize_t; typedef long int __syscall_slong_t; typedef unsigned long int __syscall_ulong_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; # 30 "/usr/include/x86_64-linux-gnu/sys/types.h" 2 3 4 typedef __u_char u_char; typedef __u_short u_short; typedef __u_int u_int; typedef __u_long u_long; typedef __quad_t quad_t; typedef __u_quad_t u_quad_t; typedef __fsid_t fsid_t; typedef __loff_t loff_t; typedef __ino_t ino_t; # 60 "/usr/include/x86_64-linux-gnu/sys/types.h" 3 4 typedef __dev_t dev_t; typedef __gid_t gid_t; typedef __mode_t mode_t; typedef __nlink_t nlink_t; typedef __uid_t uid_t; typedef __off_t off_t; # 98 "/usr/include/x86_64-linux-gnu/sys/types.h" 3 4 typedef __pid_t pid_t; typedef __id_t id_t; typedef __ssize_t ssize_t; typedef __daddr_t daddr_t; typedef __caddr_t caddr_t; typedef __key_t key_t; # 132 "/usr/include/x86_64-linux-gnu/sys/types.h" 3 4 # 1 "/usr/include/time.h" 1 3 4 # 57 "/usr/include/time.h" 3 4 typedef __clock_t clock_t; # 73 "/usr/include/time.h" 3 4 typedef __time_t time_t; # 91 "/usr/include/time.h" 3 4 typedef __clockid_t clockid_t; # 103 "/usr/include/time.h" 3 4 typedef __timer_t timer_t; # 133 "/usr/include/x86_64-linux-gnu/sys/types.h" 2 3 4 # 146 "/usr/include/x86_64-linux-gnu/sys/types.h" 3 4 # 1 "/usr/lib/gcc/x86_64-linux-gnu/4.7/include/stddef.h" 1 3 4 # 213 "/usr/lib/gcc/x86_64-linux-gnu/4.7/include/stddef.h" 3 4 typedef long unsigned int size_t; # 147 "/usr/include/x86_64-linux-gnu/sys/types.h" 2 3 4 typedef unsigned long int ulong; typedef unsigned short int ushort; typedef unsigned int uint; # 194 "/usr/include/x86_64-linux-gnu/sys/types.h" 3 4 typedef int int8_t __attribute__ ((__mode__ (__QI__))); typedef int int16_t __attribute__ ((__mode__ (__HI__))); typedef int int32_t __attribute__ ((__mode__ (__SI__))); typedef int int64_t __attribute__ ((__mode__ (__DI__))); typedef unsigned int u_int8_t __attribute__ ((__mode__ (__QI__))); typedef unsigned int u_int16_t __attribute__ ((__mode__ (__HI__))); typedef unsigned int u_int32_t __attribute__ ((__mode__ (__SI__))); typedef unsigned int u_int64_t __attribute__ ((__mode__ (__DI__))); typedef int register_t __attribute__ ((__mode__ (__word__))); # 216 "/usr/include/x86_64-linux-gnu/sys/types.h" 3 4 # 1 "/usr/include/endian.h" 1 3 4 # 36 "/usr/include/endian.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/endian.h" 1 3 4 # 37 "/usr/include/endian.h" 2 3 4 # 60 "/usr/include/endian.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/byteswap.h" 1 3 4 # 28 "/usr/include/x86_64-linux-gnu/bits/byteswap.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/wordsize.h" 1 3 4 # 29 "/usr/include/x86_64-linux-gnu/bits/byteswap.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/byteswap-16.h" 1 3 4 # 36 "/usr/include/x86_64-linux-gnu/bits/byteswap.h" 2 3 4 # 44 "/usr/include/x86_64-linux-gnu/bits/byteswap.h" 3 4 static __inline unsigned int __bswap_32 (unsigned int __bsx) { return __builtin_bswap32 (__bsx); } # 108 "/usr/include/x86_64-linux-gnu/bits/byteswap.h" 3 4 static __inline __uint64_t __bswap_64 (__uint64_t __bsx) { return __builtin_bswap64 (__bsx); } # 61 "/usr/include/endian.h" 2 3 4 # 217 "/usr/include/x86_64-linux-gnu/sys/types.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/sys/select.h" 1 3 4 # 30 "/usr/include/x86_64-linux-gnu/sys/select.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/select.h" 1 3 4 # 22 "/usr/include/x86_64-linux-gnu/bits/select.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/wordsize.h" 1 3 4 # 23 "/usr/include/x86_64-linux-gnu/bits/select.h" 2 3 4 # 31 "/usr/include/x86_64-linux-gnu/sys/select.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/sigset.h" 1 3 4 # 23 "/usr/include/x86_64-linux-gnu/bits/sigset.h" 3 4 typedef int __sig_atomic_t; typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; # 34 "/usr/include/x86_64-linux-gnu/sys/select.h" 2 3 4 typedef __sigset_t sigset_t; # 1 "/usr/include/time.h" 1 3 4 # 120 "/usr/include/time.h" 3 4 struct timespec { __time_t tv_sec; __syscall_slong_t tv_nsec; }; # 44 "/usr/include/x86_64-linux-gnu/sys/select.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/time.h" 1 3 4 # 30 "/usr/include/x86_64-linux-gnu/bits/time.h" 3 4 struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; # 46 "/usr/include/x86_64-linux-gnu/sys/select.h" 2 3 4 typedef __suseconds_t suseconds_t; typedef long int __fd_mask; # 64 "/usr/include/x86_64-linux-gnu/sys/select.h" 3 4 typedef struct { __fd_mask __fds_bits[1024 / (8 * (int) sizeof (__fd_mask))]; } fd_set; typedef __fd_mask fd_mask; # 96 "/usr/include/x86_64-linux-gnu/sys/select.h" 3 4 # 106 "/usr/include/x86_64-linux-gnu/sys/select.h" 3 4 extern int select (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, struct timeval *__restrict __timeout); # 118 "/usr/include/x86_64-linux-gnu/sys/select.h" 3 4 extern int pselect (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, const struct timespec *__restrict __timeout, const __sigset_t *__restrict __sigmask); # 131 "/usr/include/x86_64-linux-gnu/sys/select.h" 3 4 # 220 "/usr/include/x86_64-linux-gnu/sys/types.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/sys/sysmacros.h" 1 3 4 # 29 "/usr/include/x86_64-linux-gnu/sys/sysmacros.h" 3 4 __extension__ extern unsigned int gnu_dev_major (unsigned long long int __dev) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); __extension__ extern unsigned int gnu_dev_minor (unsigned long long int __dev) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); __extension__ extern unsigned long long int gnu_dev_makedev (unsigned int __major, unsigned int __minor) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); # 63 "/usr/include/x86_64-linux-gnu/sys/sysmacros.h" 3 4 # 223 "/usr/include/x86_64-linux-gnu/sys/types.h" 2 3 4 typedef __blksize_t blksize_t; typedef __blkcnt_t blkcnt_t; typedef __fsblkcnt_t fsblkcnt_t; typedef __fsfilcnt_t fsfilcnt_t; # 270 "/usr/include/x86_64-linux-gnu/sys/types.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/pthreadtypes.h" 1 3 4 # 21 "/usr/include/x86_64-linux-gnu/bits/pthreadtypes.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/wordsize.h" 1 3 4 # 22 "/usr/include/x86_64-linux-gnu/bits/pthreadtypes.h" 2 3 4 # 60 "/usr/include/x86_64-linux-gnu/bits/pthreadtypes.h" 3 4 typedef unsigned long int pthread_t; union pthread_attr_t { char __size[56]; long int __align; }; typedef union pthread_attr_t pthread_attr_t; typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; # 90 "/usr/include/x86_64-linux-gnu/bits/pthreadtypes.h" 3 4 typedef union { struct __pthread_mutex_s { int __lock; unsigned int __count; int __owner; unsigned int __nusers; int __kind; int __spins; __pthread_list_t __list; # 115 "/usr/include/x86_64-linux-gnu/bits/pthreadtypes.h" 3 4 } __data; char __size[40]; long int __align; } pthread_mutex_t; typedef union { char __size[4]; int __align; } pthread_mutexattr_t; typedef union { struct { int __lock; unsigned int __futex; __extension__ unsigned long long int __total_seq; __extension__ unsigned long long int __wakeup_seq; __extension__ unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; __extension__ long long int __align; } pthread_cond_t; typedef union { char __size[4]; int __align; } pthread_condattr_t; typedef unsigned int pthread_key_t; typedef int pthread_once_t; typedef union { struct { int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; unsigned int __flags; } __data; # 202 "/usr/include/x86_64-linux-gnu/bits/pthreadtypes.h" 3 4 char __size[56]; long int __align; } pthread_rwlock_t; typedef union { char __size[8]; long int __align; } pthread_rwlockattr_t; typedef volatile int pthread_spinlock_t; typedef union { char __size[32]; long int __align; } pthread_barrier_t; typedef union { char __size[4]; int __align; } pthread_barrierattr_t; # 271 "/usr/include/x86_64-linux-gnu/sys/types.h" 2 3 4 # 3 "/tmp/petsc-U9YCMv/config.types/conftest.c" 2 ================================================================================ TEST checkSignal from config.types(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/types.py:85) TESTING: checkSignal from config.types(config/BuildSystem/config/types.py:85) Checks the return type of signal() and defines RETSIGTYPE to that type name sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.types/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -fPIC -g /tmp/petsc-U9YCMv/config.types/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.types/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -fPIC -g /tmp/petsc-U9YCMv/config.types/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.types/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.types Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.types/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.types -o /tmp/petsc-U9YCMv/config.types/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include #ifdef signal #undef signal #endif #ifdef __cplusplus extern "C" void (*signal (int, void(*)(int)))(int); #else void (*signal())(); #endif int main() { ; return 0; } Defined "RETSIGTYPE" to "void" ================================================================================ TEST checkC99Complex from config.types(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/types.py:106) TESTING: checkC99Complex from config.types(config/BuildSystem/config/types.py:106) Check for complex numbers in in C99 std sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.types/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -fPIC -g /tmp/petsc-U9YCMv/config.types/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.types/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -fPIC -g /tmp/petsc-U9YCMv/config.types/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.types/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.types Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.types/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.types -o /tmp/petsc-U9YCMv/config.types/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { double complex x; x = I; ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.types/conftest -fPIC -g /tmp/petsc-U9YCMv/config.types/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.types/conftest -fPIC -g /tmp/petsc-U9YCMv/config.types/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.types/conftest -fPIC -g /tmp/petsc-U9YCMv/config.types/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Defined "HAVE_C99_COMPLEX" to "1" ================================================================================ TEST checkCxxComplex from config.types(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/types.py:115) TESTING: checkCxxComplex from config.types(config/BuildSystem/config/types.py:115) Check for complex numbers in namespace std Pushing language Cxx sh: mpicxx -c -o /tmp/petsc-U9YCMv/config.types/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g -fPIC /tmp/petsc-U9YCMv/config.types/conftest.cc Executing: mpicxx -c -o /tmp/petsc-U9YCMv/config.types/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g -fPIC /tmp/petsc-U9YCMv/config.types/conftest.cc sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { std::complex x; ; return 0; } Pushing language CXX Popping language CXX sh: mpicxx -o /tmp/petsc-U9YCMv/config.types/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g /tmp/petsc-U9YCMv/config.types/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: mpicxx -o /tmp/petsc-U9YCMv/config.types/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g /tmp/petsc-U9YCMv/config.types/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Defined "HAVE_CXX_COMPLEX" to "1" Popping language Cxx ================================================================================ TEST checkFortranKind from config.types(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/types.py:136) TESTING: checkFortranKind from config.types(config/BuildSystem/config/types.py:136) Checks whether selected_int_kind etc work USE_FORTRANKIND Pushing language FC sh: mpif90 -c -o /tmp/petsc-U9YCMv/config.types/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.types -fPIC -Wall -Wno-unused-variable -Wno-unused-dummy-argument -g /tmp/petsc-U9YCMv/config.types/conftest.F Executing: mpif90 -c -o /tmp/petsc-U9YCMv/config.types/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.types -fPIC -Wall -Wno-unused-variable -Wno-unused-dummy-argument -g /tmp/petsc-U9YCMv/config.types/conftest.F sh: Successful compile: Source: program main integer(kind=selected_int_kind(10)) i real(kind=selected_real_kind(10)) d end Defined "USE_FORTRANKIND" to "1" Popping language FC ================================================================================ TEST checkFortranDReal from config.types(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/types.py:148) TESTING: checkFortranDReal from config.types(config/BuildSystem/config/types.py:148) Checks whether dreal is provided in Fortran, and if not defines MISSING_DREAL Pushing language FC sh: mpif90 -c -o /tmp/petsc-U9YCMv/config.types/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.types -fPIC -Wall -Wno-unused-variable -Wno-unused-dummy-argument -g /tmp/petsc-U9YCMv/config.types/conftest.F Executing: mpif90 -c -o /tmp/petsc-U9YCMv/config.types/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.types -fPIC -Wall -Wno-unused-variable -Wno-unused-dummy-argument -g /tmp/petsc-U9YCMv/config.types/conftest.F sh: Possible ERROR while running compiler: ret = 256 error message = {/tmp/petsc-U9YCMv/config.types/conftest.F:3.16: d = dreal(3.0) 1 Error: Type of argument 'a' in call to 'dreal' at (1) should be COMPLEX(8), not REAL(4) } Source: program main double precision d d = dreal(3.0) end Compile failed inside link Defined "MISSING_DREAL" to "1" Popping language FC ================================================================================ TEST checkConst from config.types(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/types.py:156) TESTING: checkConst from config.types(config/BuildSystem/config/types.py:156) Checks for working const, and if not found defines it to empty string sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.types/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -fPIC -g /tmp/petsc-U9YCMv/config.types/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.types/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -fPIC -g /tmp/petsc-U9YCMv/config.types/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.types/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.types Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.types/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.types -o /tmp/petsc-U9YCMv/config.types/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { /* Ultrix mips cc rejects this. */ typedef int charset[2]; const charset x; /* SunOS 4.1.1 cc rejects this. */ char const *const *ccp; char **p; /* NEC SVR4.0.2 mips cc rejects this. */ struct point {int x, y;}; static struct point const zero = {0,0}; /* AIX XL C 1.02.0.0 rejects this. It does not let you subtract one const X* pointer from another in an arm of an if-expression whose if-part is not a constant expression */ const char *g = "string"; ccp = &g + (g ? g-g : 0); /* HPUX 7.0 cc rejects these. */ ++ccp; p = (char**) ccp; ccp = (char const *const *) p; /* This section avoids unused variable warnings */ if (zero.x); if (x[0]); { /* SCO 3.2v4 cc rejects this. */ char *t; char const *s = 0 ? (char *) 0 : (char const *) 0; *t++ = 0; if (*s); } { /* Someone thinks the Sun supposedly-ANSI compiler will reject this. */ int x[] = {25, 17}; const int *foo = &x[0]; ++foo; } { /* Sun SC1.0 ANSI compiler rejects this -- but not the above. */ typedef const int *iptr; iptr p = 0; ++p; } { /* AIX XL C 1.02.0.0 rejects this saying "k.c", line 2.27: 1506-025 (S) Operand must be a modifiable lvalue. */ struct s { int j; const int *ap[3]; }; struct s *b; b->j = 5; } { /* ULTRIX-32 V3.1 (Rev 9) vcc rejects this */ const int foo = 10; /* Get rid of unused variable warning */ if (foo); } ; return 0; } ================================================================================ TEST checkEndian from config.types(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/types.py:212) TESTING: checkEndian from config.types(config/BuildSystem/config/types.py:212) If the machine is big endian, defines WORDS_BIGENDIAN sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.types/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -fPIC -g /tmp/petsc-U9YCMv/config.types/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.types/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -fPIC -g /tmp/petsc-U9YCMv/config.types/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.types/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.types Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.types/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.types -o /tmp/petsc-U9YCMv/config.types/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #ifdef HAVE_SYS_PARAM_H #include #endif int main() { #if !BYTE_ORDER || !BIG_ENDIAN || !LITTLE_ENDIAN bogus endian macros #endif ; return 0; } sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.types/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -fPIC -g /tmp/petsc-U9YCMv/config.types/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.types/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -fPIC -g /tmp/petsc-U9YCMv/config.types/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.types/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.types PDT: Error: Couldn't create conftest.pdb: Trying the alternate PDT Rose parser based on EDG 4.4: /home/hills/seska/packages/pdt/x86_64//bin/edg44-c-roseparse /tmp/petsc-U9YCMv/config.types/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.types PDT: Error parsing input file /tmp/petsc-U9YCMv/config.types/conftest.c Trying Older PDT Rose parser based on EDG 3.3: /home/hills/seska/packages/pdt/x86_64//bin/roseparse /tmp/petsc-U9YCMv/config.types/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.types PDT: Error parsing input file /tmp/petsc-U9YCMv/config.types/conftest.c Error: Command(Executable) is -- Error: Full Command attempted is -- /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.types/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.types Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g /tmp/petsc-U9YCMv/config.types/conftest.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/config.types -o /tmp/petsc-U9YCMv/config.types/conftest.o Error: Compilation Failed Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -c -fPIC -g /tmp/petsc-U9YCMv/config.types/conftest.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/config.types -o /tmp/petsc-U9YCMv/config.types/conftest.o Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Possible ERROR while running compiler: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.types/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.types PDT: Error: Couldn't create conftest.pdb: Trying the alternate PDT Rose parser based on EDG 4.4: /home/hills/seska/packages/pdt/x86_64//bin/edg44-c-roseparse /tmp/petsc-U9YCMv/config.types/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.types PDT: Error parsing input file /tmp/petsc-U9YCMv/config.types/conftest.c Trying Older PDT Rose parser based on EDG 3.3: /home/hills/seska/packages/pdt/x86_64//bin/roseparse /tmp/petsc-U9YCMv/config.types/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.types PDT: Error parsing input file /tmp/petsc-U9YCMv/config.types/conftest.c Error: Command(Executable) is -- Error: Full Command attempted is -- /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.types/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.types Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g /tmp/petsc-U9YCMv/config.types/conftest.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/config.types -o /tmp/petsc-U9YCMv/config.types/conftest.o Error: Compilation Failed Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -c -fPIC -g /tmp/petsc-U9YCMv/config.types/conftest.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/config.types -o /tmp/petsc-U9YCMv/config.types/conftest.o Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue ret = 256 error message = {"/tmp/petsc-U9YCMv/config.types/conftest.c", line 11: error: identifier "not" is undefined not big endian ^ "/tmp/petsc-U9YCMv/config.types/conftest.c", line 11: error: expected a ";" not big endian ^ "/tmp/petsc-U9YCMv/config.types/conftest.c", line 11: warning: variable "big" was declared but never referenced not big endian ^ 2 errors detected in the compilation of "/tmp/petsc-U9YCMv/config.types/conftest.c". "/tmp/petsc-U9YCMv/config.types/conftest.c", line 11: error: identifier "not" is undefined not big endian ^ "/tmp/petsc-U9YCMv/config.types/conftest.c", line 11: error: expected a ";" not big endian ^ terminate called after throwing an instance of 'rose_exception' what(): Errors in Processing: (frontend_failed) Aborted (core dumped) "/tmp/petsc-U9YCMv/config.types/conftest.c", line 11: error: identifier "not" is undefined not big endian ^ "/tmp/petsc-U9YCMv/config.types/conftest.c", line 11: error: expected a ";" not big endian ^ "/tmp/petsc-U9YCMv/config.types/conftest.c", line 11: warning: variable "big" was declared but never referenced not big endian ^ terminate called after throwing an instance of 'rose_exception' what(): Errors in Processing: (frontend_failed) Aborted (core dumped) /tmp/petsc-U9YCMv/config.types/conftest.c: In function ‘main’: /tmp/petsc-U9YCMv/config.types/conftest.c:11:3: error: unknown type name ‘not’ /tmp/petsc-U9YCMv/config.types/conftest.c:11:11: error: expected ‘=’, ‘,’, ‘;’, ‘asm’ or ‘__attribute__’ before ‘endian’ make: *** [all] Error 1 } Source: #include "confdefs.h" #include "conffix.h" #include #ifdef HAVE_SYS_PARAM_H #include #endif int main() { #if BYTE_ORDER != BIG_ENDIAN not big endian #endif ; return 0; } ================================================================================ TEST checkSizeof from config.types(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/types.py:265) TESTING: checkSizeof from config.types(config/BuildSystem/config/types.py:265) Determines the size of type "typeName", and defines SIZEOF_"typeName" to be the size Checking for size of type: char Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.types/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -fPIC -g /tmp/petsc-U9YCMv/config.types/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.types/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -fPIC -g /tmp/petsc-U9YCMv/config.types/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.types/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.types Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.types/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.types -o /tmp/petsc-U9YCMv/config.types/conftest.o Error: Compilation Failed Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.types -o /tmp/petsc-U9YCMv/config.types/conftest.o Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g /tmp/petsc-U9YCMv/config.types/conftest.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/config.types -o /tmp/petsc-U9YCMv/config.types/conftest.o Looking for file: conftest.o Possible ERROR while running compiler: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.types/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.types Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.types/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.types -o /tmp/petsc-U9YCMv/config.types/conftest.o Error: Compilation Failed Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.types -o /tmp/petsc-U9YCMv/config.types/conftest.o Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g /tmp/petsc-U9YCMv/config.types/conftest.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/config.types -o /tmp/petsc-U9YCMv/config.types/conftest.o Looking for file: conftest.o error message = {/tmp/petsc-U9YCMv/config.types/conftest.c: In function ‘main’: /tmp/petsc-U9YCMv/config.types/conftest.c:12:1: error: unknown type name ‘FILE’ /tmp/petsc-U9YCMv/config.types/conftest.c:12:11: warning: initialization makes pointer from integer without a cast [enabled by default] /tmp/petsc-U9YCMv/config.types/conftest.c:14:9: warning: incompatible implicit declaration of built-in function ‘exit’ [enabled by default] /tmp/petsc-U9YCMv/config.types/conftest.c:15:1: warning: incompatible implicit declaration of built-in function ‘fprintf’ [enabled by default] } Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #include #endif int main() { FILE *f = fopen("conftestval", "w"); if (!f) exit(1); fprintf(f, "%lu\n", (unsigned long)sizeof(char)); ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.types/conftest -fPIC -g /tmp/petsc-U9YCMv/config.types/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.types/conftest -fPIC -g /tmp/petsc-U9YCMv/config.types/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.types/conftest -fPIC -g /tmp/petsc-U9YCMv/config.types/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Executing: /tmp/petsc-U9YCMv/config.types/conftest sh: /tmp/petsc-U9YCMv/config.types/conftest Executing: /tmp/petsc-U9YCMv/config.types/conftest sh: Popping language C Defined "SIZEOF_CHAR" to "1" ================================================================================ TEST checkSizeof from config.types(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/types.py:265) TESTING: checkSizeof from config.types(config/BuildSystem/config/types.py:265) Determines the size of type "typeName", and defines SIZEOF_"typeName" to be the size Checking for size of type: void * Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.types/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -fPIC -g /tmp/petsc-U9YCMv/config.types/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.types/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -fPIC -g /tmp/petsc-U9YCMv/config.types/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.types/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.types Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.types/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.types -o /tmp/petsc-U9YCMv/config.types/conftest.o Error: Compilation Failed Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.types -o /tmp/petsc-U9YCMv/config.types/conftest.o Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g /tmp/petsc-U9YCMv/config.types/conftest.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/config.types -o /tmp/petsc-U9YCMv/config.types/conftest.o Looking for file: conftest.o Possible ERROR while running compiler: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.types/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.types Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.types/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.types -o /tmp/petsc-U9YCMv/config.types/conftest.o Error: Compilation Failed Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.types -o /tmp/petsc-U9YCMv/config.types/conftest.o Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g /tmp/petsc-U9YCMv/config.types/conftest.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/config.types -o /tmp/petsc-U9YCMv/config.types/conftest.o Looking for file: conftest.o error message = {/tmp/petsc-U9YCMv/config.types/conftest.c: In function ‘main’: /tmp/petsc-U9YCMv/config.types/conftest.c:12:1: error: unknown type name ‘FILE’ /tmp/petsc-U9YCMv/config.types/conftest.c:12:11: warning: initialization makes pointer from integer without a cast [enabled by default] /tmp/petsc-U9YCMv/config.types/conftest.c:14:9: warning: incompatible implicit declaration of built-in function ‘exit’ [enabled by default] /tmp/petsc-U9YCMv/config.types/conftest.c:15:1: warning: incompatible implicit declaration of built-in function ‘fprintf’ [enabled by default] } Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #include #endif int main() { FILE *f = fopen("conftestval", "w"); if (!f) exit(1); fprintf(f, "%lu\n", (unsigned long)sizeof(void *)); ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.types/conftest -fPIC -g /tmp/petsc-U9YCMv/config.types/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.types/conftest -fPIC -g /tmp/petsc-U9YCMv/config.types/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.types/conftest -fPIC -g /tmp/petsc-U9YCMv/config.types/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Executing: /tmp/petsc-U9YCMv/config.types/conftest sh: /tmp/petsc-U9YCMv/config.types/conftest Executing: /tmp/petsc-U9YCMv/config.types/conftest sh: Popping language C Defined "SIZEOF_VOID_P" to "8" ================================================================================ TEST checkSizeof from config.types(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/types.py:265) TESTING: checkSizeof from config.types(config/BuildSystem/config/types.py:265) Determines the size of type "typeName", and defines SIZEOF_"typeName" to be the size Checking for size of type: short Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.types/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -fPIC -g /tmp/petsc-U9YCMv/config.types/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.types/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -fPIC -g /tmp/petsc-U9YCMv/config.types/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.types/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.types Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.types/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.types -o /tmp/petsc-U9YCMv/config.types/conftest.o Error: Compilation Failed Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.types -o /tmp/petsc-U9YCMv/config.types/conftest.o Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g /tmp/petsc-U9YCMv/config.types/conftest.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/config.types -o /tmp/petsc-U9YCMv/config.types/conftest.o Looking for file: conftest.o Possible ERROR while running compiler: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.types/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.types Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.types/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.types -o /tmp/petsc-U9YCMv/config.types/conftest.o Error: Compilation Failed Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.types -o /tmp/petsc-U9YCMv/config.types/conftest.o Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g /tmp/petsc-U9YCMv/config.types/conftest.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/config.types -o /tmp/petsc-U9YCMv/config.types/conftest.o Looking for file: conftest.o error message = {/tmp/petsc-U9YCMv/config.types/conftest.c: In function ‘main’: /tmp/petsc-U9YCMv/config.types/conftest.c:12:1: error: unknown type name ‘FILE’ /tmp/petsc-U9YCMv/config.types/conftest.c:12:11: warning: initialization makes pointer from integer without a cast [enabled by default] /tmp/petsc-U9YCMv/config.types/conftest.c:14:9: warning: incompatible implicit declaration of built-in function ‘exit’ [enabled by default] /tmp/petsc-U9YCMv/config.types/conftest.c:15:1: warning: incompatible implicit declaration of built-in function ‘fprintf’ [enabled by default] } Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #include #endif int main() { FILE *f = fopen("conftestval", "w"); if (!f) exit(1); fprintf(f, "%lu\n", (unsigned long)sizeof(short)); ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.types/conftest -fPIC -g /tmp/petsc-U9YCMv/config.types/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.types/conftest -fPIC -g /tmp/petsc-U9YCMv/config.types/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.types/conftest -fPIC -g /tmp/petsc-U9YCMv/config.types/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Executing: /tmp/petsc-U9YCMv/config.types/conftest sh: /tmp/petsc-U9YCMv/config.types/conftest Executing: /tmp/petsc-U9YCMv/config.types/conftest sh: Popping language C Defined "SIZEOF_SHORT" to "2" ================================================================================ TEST checkSizeof from config.types(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/types.py:265) TESTING: checkSizeof from config.types(config/BuildSystem/config/types.py:265) Determines the size of type "typeName", and defines SIZEOF_"typeName" to be the size Checking for size of type: int Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.types/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -fPIC -g /tmp/petsc-U9YCMv/config.types/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.types/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -fPIC -g /tmp/petsc-U9YCMv/config.types/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.types/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.types Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.types/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.types -o /tmp/petsc-U9YCMv/config.types/conftest.o Error: Compilation Failed Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.types -o /tmp/petsc-U9YCMv/config.types/conftest.o Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g /tmp/petsc-U9YCMv/config.types/conftest.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/config.types -o /tmp/petsc-U9YCMv/config.types/conftest.o Looking for file: conftest.o Possible ERROR while running compiler: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.types/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.types Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.types/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.types -o /tmp/petsc-U9YCMv/config.types/conftest.o Error: Compilation Failed Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.types -o /tmp/petsc-U9YCMv/config.types/conftest.o Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g /tmp/petsc-U9YCMv/config.types/conftest.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/config.types -o /tmp/petsc-U9YCMv/config.types/conftest.o Looking for file: conftest.o error message = {/tmp/petsc-U9YCMv/config.types/conftest.c: In function ‘main’: /tmp/petsc-U9YCMv/config.types/conftest.c:12:1: error: unknown type name ‘FILE’ /tmp/petsc-U9YCMv/config.types/conftest.c:12:11: warning: initialization makes pointer from integer without a cast [enabled by default] /tmp/petsc-U9YCMv/config.types/conftest.c:14:9: warning: incompatible implicit declaration of built-in function ‘exit’ [enabled by default] /tmp/petsc-U9YCMv/config.types/conftest.c:15:1: warning: incompatible implicit declaration of built-in function ‘fprintf’ [enabled by default] } Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #include #endif int main() { FILE *f = fopen("conftestval", "w"); if (!f) exit(1); fprintf(f, "%lu\n", (unsigned long)sizeof(int)); ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.types/conftest -fPIC -g /tmp/petsc-U9YCMv/config.types/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.types/conftest -fPIC -g /tmp/petsc-U9YCMv/config.types/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.types/conftest -fPIC -g /tmp/petsc-U9YCMv/config.types/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Executing: /tmp/petsc-U9YCMv/config.types/conftest sh: /tmp/petsc-U9YCMv/config.types/conftest Executing: /tmp/petsc-U9YCMv/config.types/conftest sh: Popping language C Defined "SIZEOF_INT" to "4" ================================================================================ TEST checkSizeof from config.types(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/types.py:265) TESTING: checkSizeof from config.types(config/BuildSystem/config/types.py:265) Determines the size of type "typeName", and defines SIZEOF_"typeName" to be the size Checking for size of type: long Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.types/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -fPIC -g /tmp/petsc-U9YCMv/config.types/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.types/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -fPIC -g /tmp/petsc-U9YCMv/config.types/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.types/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.types Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.types/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.types -o /tmp/petsc-U9YCMv/config.types/conftest.o Error: Compilation Failed Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.types -o /tmp/petsc-U9YCMv/config.types/conftest.o Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g /tmp/petsc-U9YCMv/config.types/conftest.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/config.types -o /tmp/petsc-U9YCMv/config.types/conftest.o Looking for file: conftest.o Possible ERROR while running compiler: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.types/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.types Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.types/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.types -o /tmp/petsc-U9YCMv/config.types/conftest.o Error: Compilation Failed Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.types -o /tmp/petsc-U9YCMv/config.types/conftest.o Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g /tmp/petsc-U9YCMv/config.types/conftest.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/config.types -o /tmp/petsc-U9YCMv/config.types/conftest.o Looking for file: conftest.o error message = {/tmp/petsc-U9YCMv/config.types/conftest.c: In function ‘main’: /tmp/petsc-U9YCMv/config.types/conftest.c:12:1: error: unknown type name ‘FILE’ /tmp/petsc-U9YCMv/config.types/conftest.c:12:11: warning: initialization makes pointer from integer without a cast [enabled by default] /tmp/petsc-U9YCMv/config.types/conftest.c:14:9: warning: incompatible implicit declaration of built-in function ‘exit’ [enabled by default] /tmp/petsc-U9YCMv/config.types/conftest.c:15:1: warning: incompatible implicit declaration of built-in function ‘fprintf’ [enabled by default] } Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #include #endif int main() { FILE *f = fopen("conftestval", "w"); if (!f) exit(1); fprintf(f, "%lu\n", (unsigned long)sizeof(long)); ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.types/conftest -fPIC -g /tmp/petsc-U9YCMv/config.types/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.types/conftest -fPIC -g /tmp/petsc-U9YCMv/config.types/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.types/conftest -fPIC -g /tmp/petsc-U9YCMv/config.types/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Executing: /tmp/petsc-U9YCMv/config.types/conftest sh: /tmp/petsc-U9YCMv/config.types/conftest Executing: /tmp/petsc-U9YCMv/config.types/conftest sh: Popping language C Defined "SIZEOF_LONG" to "8" ================================================================================ TEST checkSizeof from config.types(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/types.py:265) TESTING: checkSizeof from config.types(config/BuildSystem/config/types.py:265) Determines the size of type "typeName", and defines SIZEOF_"typeName" to be the size Checking for size of type: long long Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.types/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -fPIC -g /tmp/petsc-U9YCMv/config.types/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.types/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -fPIC -g /tmp/petsc-U9YCMv/config.types/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.types/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.types Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.types/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.types -o /tmp/petsc-U9YCMv/config.types/conftest.o Error: Compilation Failed Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.types -o /tmp/petsc-U9YCMv/config.types/conftest.o Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g /tmp/petsc-U9YCMv/config.types/conftest.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/config.types -o /tmp/petsc-U9YCMv/config.types/conftest.o Looking for file: conftest.o Possible ERROR while running compiler: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.types/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.types Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.types/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.types -o /tmp/petsc-U9YCMv/config.types/conftest.o Error: Compilation Failed Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.types -o /tmp/petsc-U9YCMv/config.types/conftest.o Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g /tmp/petsc-U9YCMv/config.types/conftest.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/config.types -o /tmp/petsc-U9YCMv/config.types/conftest.o Looking for file: conftest.o error message = {/tmp/petsc-U9YCMv/config.types/conftest.c: In function ‘main’: /tmp/petsc-U9YCMv/config.types/conftest.c:12:1: error: unknown type name ‘FILE’ /tmp/petsc-U9YCMv/config.types/conftest.c:12:11: warning: initialization makes pointer from integer without a cast [enabled by default] /tmp/petsc-U9YCMv/config.types/conftest.c:14:9: warning: incompatible implicit declaration of built-in function ‘exit’ [enabled by default] /tmp/petsc-U9YCMv/config.types/conftest.c:15:1: warning: incompatible implicit declaration of built-in function ‘fprintf’ [enabled by default] } Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #include #endif int main() { FILE *f = fopen("conftestval", "w"); if (!f) exit(1); fprintf(f, "%lu\n", (unsigned long)sizeof(long long)); ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.types/conftest -fPIC -g /tmp/petsc-U9YCMv/config.types/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.types/conftest -fPIC -g /tmp/petsc-U9YCMv/config.types/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.types/conftest -fPIC -g /tmp/petsc-U9YCMv/config.types/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Executing: /tmp/petsc-U9YCMv/config.types/conftest sh: /tmp/petsc-U9YCMv/config.types/conftest Executing: /tmp/petsc-U9YCMv/config.types/conftest sh: Popping language C Defined "SIZEOF_LONG_LONG" to "8" ================================================================================ TEST checkSizeof from config.types(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/types.py:265) TESTING: checkSizeof from config.types(config/BuildSystem/config/types.py:265) Determines the size of type "typeName", and defines SIZEOF_"typeName" to be the size Checking for size of type: float Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.types/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -fPIC -g /tmp/petsc-U9YCMv/config.types/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.types/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -fPIC -g /tmp/petsc-U9YCMv/config.types/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.types/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.types Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.types/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.types -o /tmp/petsc-U9YCMv/config.types/conftest.o Error: Compilation Failed Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.types -o /tmp/petsc-U9YCMv/config.types/conftest.o Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g /tmp/petsc-U9YCMv/config.types/conftest.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/config.types -o /tmp/petsc-U9YCMv/config.types/conftest.o Looking for file: conftest.o Possible ERROR while running compiler: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.types/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.types Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.types/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.types -o /tmp/petsc-U9YCMv/config.types/conftest.o Error: Compilation Failed Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.types -o /tmp/petsc-U9YCMv/config.types/conftest.o Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g /tmp/petsc-U9YCMv/config.types/conftest.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/config.types -o /tmp/petsc-U9YCMv/config.types/conftest.o Looking for file: conftest.o error message = {/tmp/petsc-U9YCMv/config.types/conftest.c: In function ‘main’: /tmp/petsc-U9YCMv/config.types/conftest.c:12:1: error: unknown type name ‘FILE’ /tmp/petsc-U9YCMv/config.types/conftest.c:12:11: warning: initialization makes pointer from integer without a cast [enabled by default] /tmp/petsc-U9YCMv/config.types/conftest.c:14:9: warning: incompatible implicit declaration of built-in function ‘exit’ [enabled by default] /tmp/petsc-U9YCMv/config.types/conftest.c:15:1: warning: incompatible implicit declaration of built-in function ‘fprintf’ [enabled by default] } Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #include #endif int main() { FILE *f = fopen("conftestval", "w"); if (!f) exit(1); fprintf(f, "%lu\n", (unsigned long)sizeof(float)); ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.types/conftest -fPIC -g /tmp/petsc-U9YCMv/config.types/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.types/conftest -fPIC -g /tmp/petsc-U9YCMv/config.types/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.types/conftest -fPIC -g /tmp/petsc-U9YCMv/config.types/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Executing: /tmp/petsc-U9YCMv/config.types/conftest sh: /tmp/petsc-U9YCMv/config.types/conftest Executing: /tmp/petsc-U9YCMv/config.types/conftest sh: Popping language C Defined "SIZEOF_FLOAT" to "4" ================================================================================ TEST checkSizeof from config.types(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/types.py:265) TESTING: checkSizeof from config.types(config/BuildSystem/config/types.py:265) Determines the size of type "typeName", and defines SIZEOF_"typeName" to be the size Checking for size of type: double Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.types/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -fPIC -g /tmp/petsc-U9YCMv/config.types/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.types/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -fPIC -g /tmp/petsc-U9YCMv/config.types/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.types/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.types Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.types/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.types -o /tmp/petsc-U9YCMv/config.types/conftest.o Error: Compilation Failed Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.types -o /tmp/petsc-U9YCMv/config.types/conftest.o Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g /tmp/petsc-U9YCMv/config.types/conftest.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/config.types -o /tmp/petsc-U9YCMv/config.types/conftest.o Looking for file: conftest.o Possible ERROR while running compiler: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.types/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.types Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.types/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.types -o /tmp/petsc-U9YCMv/config.types/conftest.o Error: Compilation Failed Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.types -o /tmp/petsc-U9YCMv/config.types/conftest.o Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g /tmp/petsc-U9YCMv/config.types/conftest.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/config.types -o /tmp/petsc-U9YCMv/config.types/conftest.o Looking for file: conftest.o error message = {/tmp/petsc-U9YCMv/config.types/conftest.c: In function ‘main’: /tmp/petsc-U9YCMv/config.types/conftest.c:12:1: error: unknown type name ‘FILE’ /tmp/petsc-U9YCMv/config.types/conftest.c:12:11: warning: initialization makes pointer from integer without a cast [enabled by default] /tmp/petsc-U9YCMv/config.types/conftest.c:14:9: warning: incompatible implicit declaration of built-in function ‘exit’ [enabled by default] /tmp/petsc-U9YCMv/config.types/conftest.c:15:1: warning: incompatible implicit declaration of built-in function ‘fprintf’ [enabled by default] } Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #include #endif int main() { FILE *f = fopen("conftestval", "w"); if (!f) exit(1); fprintf(f, "%lu\n", (unsigned long)sizeof(double)); ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.types/conftest -fPIC -g /tmp/petsc-U9YCMv/config.types/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.types/conftest -fPIC -g /tmp/petsc-U9YCMv/config.types/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.types/conftest -fPIC -g /tmp/petsc-U9YCMv/config.types/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Executing: /tmp/petsc-U9YCMv/config.types/conftest sh: /tmp/petsc-U9YCMv/config.types/conftest Executing: /tmp/petsc-U9YCMv/config.types/conftest sh: Popping language C Defined "SIZEOF_DOUBLE" to "8" ================================================================================ TEST checkSizeof from config.types(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/types.py:265) TESTING: checkSizeof from config.types(config/BuildSystem/config/types.py:265) Determines the size of type "typeName", and defines SIZEOF_"typeName" to be the size Checking for size of type: size_t Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.types/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -fPIC -g /tmp/petsc-U9YCMv/config.types/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.types/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -fPIC -g /tmp/petsc-U9YCMv/config.types/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.types/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.types Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.types/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.types -o /tmp/petsc-U9YCMv/config.types/conftest.o Error: Compilation Failed Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.types -o /tmp/petsc-U9YCMv/config.types/conftest.o Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g /tmp/petsc-U9YCMv/config.types/conftest.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/config.types -o /tmp/petsc-U9YCMv/config.types/conftest.o Looking for file: conftest.o Possible ERROR while running compiler: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.types/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.types Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.types/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.types -o /tmp/petsc-U9YCMv/config.types/conftest.o Error: Compilation Failed Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.types -o /tmp/petsc-U9YCMv/config.types/conftest.o Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g /tmp/petsc-U9YCMv/config.types/conftest.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/config.types -o /tmp/petsc-U9YCMv/config.types/conftest.o Looking for file: conftest.o error message = {/tmp/petsc-U9YCMv/config.types/conftest.c: In function ‘main’: /tmp/petsc-U9YCMv/config.types/conftest.c:12:1: error: unknown type name ‘FILE’ /tmp/petsc-U9YCMv/config.types/conftest.c:12:11: warning: initialization makes pointer from integer without a cast [enabled by default] /tmp/petsc-U9YCMv/config.types/conftest.c:14:9: warning: incompatible implicit declaration of built-in function ‘exit’ [enabled by default] /tmp/petsc-U9YCMv/config.types/conftest.c:15:1: warning: incompatible implicit declaration of built-in function ‘fprintf’ [enabled by default] } Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #include #endif int main() { FILE *f = fopen("conftestval", "w"); if (!f) exit(1); fprintf(f, "%lu\n", (unsigned long)sizeof(size_t)); ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.types/conftest -fPIC -g /tmp/petsc-U9YCMv/config.types/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.types/conftest -fPIC -g /tmp/petsc-U9YCMv/config.types/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.types/conftest -fPIC -g /tmp/petsc-U9YCMv/config.types/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Executing: /tmp/petsc-U9YCMv/config.types/conftest sh: /tmp/petsc-U9YCMv/config.types/conftest Executing: /tmp/petsc-U9YCMv/config.types/conftest sh: Popping language C Defined "SIZEOF_SIZE_T" to "8" ================================================================================ TEST checkBitsPerByte from config.types(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/types.py:316) TESTING: checkBitsPerByte from config.types(config/BuildSystem/config/types.py:316) Determine the nubmer of bits per byte and define BITS_PER_BYTE sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.types/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -fPIC -g /tmp/petsc-U9YCMv/config.types/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.types/conftest.o -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -fPIC -g /tmp/petsc-U9YCMv/config.types/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.types/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.types Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.types/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.types -o /tmp/petsc-U9YCMv/config.types/conftest.o Error: Compilation Failed Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.types -o /tmp/petsc-U9YCMv/config.types/conftest.o Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g /tmp/petsc-U9YCMv/config.types/conftest.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/config.types -o /tmp/petsc-U9YCMv/config.types/conftest.o Looking for file: conftest.o Possible ERROR while running compiler: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.types/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.types Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.types/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.types -o /tmp/petsc-U9YCMv/config.types/conftest.o Error: Compilation Failed Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.types -o /tmp/petsc-U9YCMv/config.types/conftest.o Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g /tmp/petsc-U9YCMv/config.types/conftest.c -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/config.types -o /tmp/petsc-U9YCMv/config.types/conftest.o Looking for file: conftest.o error message = {/tmp/petsc-U9YCMv/config.types/conftest.c: In function ‘main’: /tmp/petsc-U9YCMv/config.types/conftest.c:10:1: error: unknown type name ‘FILE’ /tmp/petsc-U9YCMv/config.types/conftest.c:10:11: warning: initialization makes pointer from integer without a cast [enabled by default] /tmp/petsc-U9YCMv/config.types/conftest.c:15:13: warning: incompatible implicit declaration of built-in function ‘exit’ [enabled by default] /tmp/petsc-U9YCMv/config.types/conftest.c:19:5: warning: incompatible implicit declaration of built-in function ‘fprintf’ [enabled by default] } Source: #include "confdefs.h" #include "conffix.h" #if STDC_HEADERS #include #include #endif int main() { FILE *f = fopen("conftestval", "w"); char val[2]; int i = 0; if (!f) exit(1); val[0]='\1'; val[1]='\0'; while(val[0]) {val[0] <<= 1; i++;} fprintf(f, "%d\n", i); ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.types/conftest -fPIC -g /tmp/petsc-U9YCMv/config.types/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.types/conftest -fPIC -g /tmp/petsc-U9YCMv/config.types/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.types/conftest -fPIC -g /tmp/petsc-U9YCMv/config.types/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Executing: /tmp/petsc-U9YCMv/config.types/conftest sh: /tmp/petsc-U9YCMv/config.types/conftest Executing: /tmp/petsc-U9YCMv/config.types/conftest sh: Defined "BITS_PER_BYTE" to "8" ================================================================================ TEST checkVisibility from config.types(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/types.py:362) TESTING: checkVisibility from config.types(config/BuildSystem/config/types.py:362) ================================================================================ TEST configureMemAlign from PETSc.utilities.memAlign(/home/hills/seska-hills/packages/petsc-3.4.2/config/PETSc/utilities/memAlign.py:30) TESTING: configureMemAlign from PETSc.utilities.memAlign(config/PETSc/utilities/memAlign.py:30) Choose alignment Defined "MEMALIGN" to "16" Memory alignment is 16 ================================================================================ TEST configureCHUD from PETSc.utilities.CHUD(/home/hills/seska-hills/packages/petsc-3.4.2/config/PETSc/utilities/CHUD.py:25) TESTING: configureCHUD from PETSc.utilities.CHUD(config/PETSc/utilities/CHUD.py:25) Determines if the Apple CHUD hardware monitoring utilities are available sh: uname -s Executing: uname -s sh: Linux ================================================================================ TEST check from config.libraries(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/libraries.py:145) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:145) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for function socket in library ['socket', 'nsl'] [] Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.libraries/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -o /tmp/petsc-U9YCMv/config.libraries/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char socket(); int main() { socket() ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -lsocket -lnsl -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -lsocket -lnsl -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -lsocket -lnsl -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -lsocket -lnsl -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -lsocket -lnsl -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -lsocket -lnsl -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Possible ERROR while running linker: /usr/bin/ld: cannot find -lsocket collect2: error: ld returned 1 exit status /usr/bin/ld: cannot find -lsocket collect2: error: ld returned 1 exit status make: *** [all] Error 1 output: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -lsocket -lnsl -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -lsocket -lnsl -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -lsocket -lnsl -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -lsocket -lnsl -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt ret = 256 error message = {/usr/bin/ld: cannot find -lsocket collect2: error: ld returned 1 exit status /usr/bin/ld: cannot find -lsocket collect2: error: ld returned 1 exit status make: *** [all] Error 1 } Pushing language C Popping language C in tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -lsocket -lnsl -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char socket(); int main() { socket() ; return 0; } Popping language C ================================================================================ TEST check from config.libraries(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/libraries.py:145) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:145) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for function handle_sigfpes in library ['fpe'] [] Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.libraries/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -o /tmp/petsc-U9YCMv/config.libraries/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char handle_sigfpes(); int main() { handle_sigfpes() ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -lfpe -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -lfpe -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -lfpe -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -lfpe -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -lfpe -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -lfpe -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Possible ERROR while running linker: /usr/bin/ld: cannot find -lfpe collect2: error: ld returned 1 exit status /usr/bin/ld: cannot find -lfpe collect2: error: ld returned 1 exit status make: *** [all] Error 1 output: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -lfpe -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -lfpe -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -lfpe -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -lfpe -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt ret = 256 error message = {/usr/bin/ld: cannot find -lfpe collect2: error: ld returned 1 exit status /usr/bin/ld: cannot find -lfpe collect2: error: ld returned 1 exit status make: *** [all] Error 1 } Pushing language C Popping language C in tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -lfpe -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char handle_sigfpes(); int main() { handle_sigfpes() ; return 0; } Popping language C ================================================================================ TEST check from config.libraries(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/libraries.py:145) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:145) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for function socket in library ['socket', 'nsl'] [] Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.libraries/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -o /tmp/petsc-U9YCMv/config.libraries/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char socket(); int main() { socket() ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -lsocket -lnsl -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -lsocket -lnsl -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -lsocket -lnsl -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -lsocket -lnsl -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -lsocket -lnsl -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -lsocket -lnsl -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Possible ERROR while running linker: /usr/bin/ld: cannot find -lsocket collect2: error: ld returned 1 exit status /usr/bin/ld: cannot find -lsocket collect2: error: ld returned 1 exit status make: *** [all] Error 1 output: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -lsocket -lnsl -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -lsocket -lnsl -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -lsocket -lnsl -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -lsocket -lnsl -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt ret = 256 error message = {/usr/bin/ld: cannot find -lsocket collect2: error: ld returned 1 exit status /usr/bin/ld: cannot find -lsocket collect2: error: ld returned 1 exit status make: *** [all] Error 1 } Pushing language C Popping language C in tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -lsocket -lnsl -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char socket(); int main() { socket() ; return 0; } Popping language C ================================================================================ TEST check from config.libraries(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/libraries.py:145) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:145) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for function handle_sigfpes in library ['fpe'] [] Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.libraries/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -o /tmp/petsc-U9YCMv/config.libraries/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char handle_sigfpes(); int main() { handle_sigfpes() ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -lfpe -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -lfpe -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -lfpe -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -lfpe -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -lfpe -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -lfpe -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Possible ERROR while running linker: /usr/bin/ld: cannot find -lfpe collect2: error: ld returned 1 exit status /usr/bin/ld: cannot find -lfpe collect2: error: ld returned 1 exit status make: *** [all] Error 1 output: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -lfpe -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -lfpe -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -lfpe -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -lfpe -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt ret = 256 error message = {/usr/bin/ld: cannot find -lfpe collect2: error: ld returned 1 exit status /usr/bin/ld: cannot find -lfpe collect2: error: ld returned 1 exit status make: *** [all] Error 1 } Pushing language C Popping language C in tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -lfpe -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char handle_sigfpes(); int main() { handle_sigfpes() ; return 0; } Popping language C ================================================================================ TEST checkMath from config.libraries(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/libraries.py:224) TESTING: checkMath from config.libraries(config/BuildSystem/config/libraries.py:224) Check for sin() in libm, the math library Checking for function sin in library [''] [] Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.libraries/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -o /tmp/petsc-U9YCMv/config.libraries/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ double sin(double); int main() { double x = 0,y; y = sin(x); ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Popping language C Checking for function floor in library [''] [] Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.libraries/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -o /tmp/petsc-U9YCMv/config.libraries/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ double floor(double); int main() { double x = 0,y; y = floor(x); ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Popping language C Checking for function log10 in library [''] [] Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.libraries/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -o /tmp/petsc-U9YCMv/config.libraries/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ double log10(double); int main() { double x = 0,y; y = log10(x); ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Popping language C Checking for function pow in library [''] [] Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.libraries/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -o /tmp/petsc-U9YCMv/config.libraries/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ double pow(double, double); int main() { double x = 0,y ; y = pow(x, x); ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Popping language C Math functions are linked in by default ================================================================================ TEST checkMathErf from config.libraries(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/libraries.py:240) TESTING: checkMathErf from config.libraries(config/BuildSystem/config/libraries.py:240) Check for erf() in libm, the math library Checking for function erf in library [] [] Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.libraries/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -o /tmp/petsc-U9YCMv/config.libraries/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ double erf(double); int main() { double x = 0,y; y = erf(x); ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Popping language C erf() found Defined "HAVE_ERF" to "1" ================================================================================ TEST checkMathTgamma from config.libraries(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/libraries.py:249) TESTING: checkMathTgamma from config.libraries(config/BuildSystem/config/libraries.py:249) Check for tgama() in libm, the math library Checking for function tgamma in library [] [] Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.libraries/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -o /tmp/petsc-U9YCMv/config.libraries/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ double tgamma(double); int main() { double x = 0,y; y = tgamma(x); ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Popping language C tgamma() found Defined "HAVE_TGAMMA" to "1" ================================================================================ TEST checkCompression from config.libraries(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/libraries.py:258) TESTING: checkCompression from config.libraries(config/BuildSystem/config/libraries.py:258) Check for libz, the compression library Checking for function compress in library [''] [] Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.libraries/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -o /tmp/petsc-U9YCMv/config.libraries/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ int compress(char *dest, unsigned long *destLen, const char *source, unsigned long sourceLen); int main() { char *dest = 0; const char *source = 0; unsigned long destLen = 0, sourceLen = 0; int ret = 0; ret = compress(dest, &destLen, source, sourceLen); ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Possible ERROR while running linker: /tmp/petsc-U9YCMv/config.libraries/conftest.o: In function `main': /tmp/petsc-U9YCMv/config.libraries/conftest.c:7: undefined reference to `compress' collect2: error: ld returned 1 exit status /tmp/petsc-U9YCMv/config.libraries/conftest.o: In function `main': /tmp/petsc-U9YCMv/config.libraries/conftest.c:7: undefined reference to `compress' collect2: error: ld returned 1 exit status make: *** [all] Error 1 output: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt ret = 256 error message = {/tmp/petsc-U9YCMv/config.libraries/conftest.o: In function `main': /tmp/petsc-U9YCMv/config.libraries/conftest.c:7: undefined reference to `compress' collect2: error: ld returned 1 exit status /tmp/petsc-U9YCMv/config.libraries/conftest.o: In function `main': /tmp/petsc-U9YCMv/config.libraries/conftest.c:7: undefined reference to `compress' collect2: error: ld returned 1 exit status make: *** [all] Error 1 } Pushing language C Popping language C in tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ int compress(char *dest, unsigned long *destLen, const char *source, unsigned long sourceLen); int main() { char *dest = 0; const char *source = 0; unsigned long destLen = 0, sourceLen = 0; int ret = 0; ret = compress(dest, &destLen, source, sourceLen); ; return 0; } Popping language C Checking for function compress in library ['z'] [] Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.libraries/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -o /tmp/petsc-U9YCMv/config.libraries/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ int compress(char *dest, unsigned long *destLen, const char *source, unsigned long sourceLen); int main() { char *dest = 0; const char *source = 0; unsigned long destLen = 0, sourceLen = 0; int ret = 0; ret = compress(dest, &destLen, source, sourceLen); ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -lz -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -lz -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -lz -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -lz -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -lz -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -lz -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Possible ERROR while running linker: /usr/bin/ld: cannot find -lz collect2: error: ld returned 1 exit status /usr/bin/ld: cannot find -lz collect2: error: ld returned 1 exit status make: *** [all] Error 1 output: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -lz -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -lz -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -lz -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -lz -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt ret = 256 error message = {/usr/bin/ld: cannot find -lz collect2: error: ld returned 1 exit status /usr/bin/ld: cannot find -lz collect2: error: ld returned 1 exit status make: *** [all] Error 1 } Pushing language C Popping language C in tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -lz -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ int compress(char *dest, unsigned long *destLen, const char *source, unsigned long sourceLen); int main() { char *dest = 0; const char *source = 0; unsigned long destLen = 0, sourceLen = 0; int ret = 0; ret = compress(dest, &destLen, source, sourceLen); ; return 0; } Popping language C Checking for function compress in library ['zlib.lib'] [] Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.libraries/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -o /tmp/petsc-U9YCMv/config.libraries/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ int compress(char *dest, unsigned long *destLen, const char *source, unsigned long sourceLen); int main() { char *dest = 0; const char *source = 0; unsigned long destLen = 0, sourceLen = 0; int ret = 0; ret = compress(dest, &destLen, source, sourceLen); ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o zlib.lib -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o zlib.lib -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o zlib.lib -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o zlib.lib -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o zlib.lib -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o zlib.lib -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Possible ERROR while running linker: gcc: error: zlib.lib: No such file or directory gcc: error: zlib.lib: No such file or directory make: *** [all] Error 1 output: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o zlib.lib -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o zlib.lib -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o zlib.lib -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o zlib.lib -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt ret = 256 error message = {gcc: error: zlib.lib: No such file or directory gcc: error: zlib.lib: No such file or directory make: *** [all] Error 1 } Pushing language C Popping language C in tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o zlib.lib -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ int compress(char *dest, unsigned long *destLen, const char *source, unsigned long sourceLen); int main() { char *dest = 0; const char *source = 0; unsigned long destLen = 0, sourceLen = 0; int ret = 0; ret = compress(dest, &destLen, source, sourceLen); ; return 0; } Popping language C Warning: No compression library found ================================================================================ TEST checkRealtime from config.libraries(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/libraries.py:279) TESTING: checkRealtime from config.libraries(config/BuildSystem/config/libraries.py:279) Check for presence of clock_gettime() in realtime library (POSIX Realtime extensions) Checking for function clock_gettime in library [''] [] Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.libraries/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -o /tmp/petsc-U9YCMv/config.libraries/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include int main() { struct timespec tp; clock_gettime(CLOCK_REALTIME,&tp);; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Popping language C realtime functions are linked in by default ================================================================================ TEST checkDynamic from config.libraries(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/libraries.py:295) TESTING: checkDynamic from config.libraries(config/BuildSystem/config/libraries.py:295) Check for the header and libraries necessary for dynamic library manipulation ================================================================================ TEST configureMissingDefines from PETSc.utilities.missing(/home/hills/seska-hills/packages/petsc-3.4.2/config/PETSc/utilities/missing.py:35) TESTING: configureMissingDefines from PETSc.utilities.missing(config/PETSc/utilities/missing.py:35) Checks for limits All intermediate test results are stored in /tmp/petsc-U9YCMv/PETSc.utilities.missing sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.utilities.missing Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -o /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.o Error: Compilation Failed Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -o /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.o Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -o /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.o Looking for file: conftest.o Possible ERROR while running compiler: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.utilities.missing Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -o /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.o Error: Compilation Failed Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -o /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.o Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -o /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.o Looking for file: conftest.o error message = {/tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.c: In function ‘main’: /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.c:8:7: error: ‘INT_MAX’ undeclared (first use in this function) /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.c:8:7: note: each undeclared identifier is reported only once for each function it appears in } Source: #include "confdefs.h" #include "conffix.h" #ifdef PETSC_HAVE_LIMITS_H #include #endif int main() { int i=INT_MAX; if (i); ; return 0; } sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -fPIC -g /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -fPIC -g /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.utilities.missing Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -o /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.o Error: Compilation Failed Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -o /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.o Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -o /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.o Looking for file: conftest.o Possible ERROR while running compiler: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.utilities.missing Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -o /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.o Error: Compilation Failed Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -o /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.o Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -o /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.o Looking for file: conftest.o error message = {/tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.c: In function ‘main’: /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.c:8:10: error: ‘DBL_MAX’ undeclared (first use in this function) /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.c:8:10: note: each undeclared identifier is reported only once for each function it appears in } Source: #include "confdefs.h" #include "conffix.h" #ifdef PETSC_HAVE_FLOAT_H #include #endif int main() { double d=DBL_MAX; if (d); ; return 0; } ================================================================================ TEST configureMissingUtypeTypedefs from PETSc.utilities.missing(/home/hills/seska-hills/packages/petsc-3.4.2/config/PETSc/utilities/missing.py:45) TESTING: configureMissingUtypeTypedefs from PETSc.utilities.missing(config/PETSc/utilities/missing.py:45) Checks if u_short is undefined sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -fPIC -g /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -fPIC -g /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.utilities.missing Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -o /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { u_short foo; ; return 0; } ================================================================================ TEST configureMissingFunctions from PETSc.utilities.missing(/home/hills/seska-hills/packages/petsc-3.4.2/config/PETSc/utilities/missing.py:51) TESTING: configureMissingFunctions from PETSc.utilities.missing(config/PETSc/utilities/missing.py:51) Checks for SOCKETS ================================================================================ TEST configureMissingSignals from PETSc.utilities.missing(/home/hills/seska-hills/packages/petsc-3.4.2/config/PETSc/utilities/missing.py:71) TESTING: configureMissingSignals from PETSc.utilities.missing(config/PETSc/utilities/missing.py:71) Check for missing signals, and define MISSING_ if necessary sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -fPIC -g /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -fPIC -g /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.utilities.missing Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -o /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGABRT; if (i); ; return 0; } sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -fPIC -g /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -fPIC -g /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.utilities.missing Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -o /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGALRM; if (i); ; return 0; } sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -fPIC -g /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -fPIC -g /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.utilities.missing Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -o /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGBUS; if (i); ; return 0; } sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -fPIC -g /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -fPIC -g /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.utilities.missing Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -o /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGCHLD; if (i); ; return 0; } sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -fPIC -g /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -fPIC -g /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.utilities.missing Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -o /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGCONT; if (i); ; return 0; } sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -fPIC -g /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -fPIC -g /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.utilities.missing Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -o /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGFPE; if (i); ; return 0; } sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -fPIC -g /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -fPIC -g /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.utilities.missing Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -o /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGHUP; if (i); ; return 0; } sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -fPIC -g /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -fPIC -g /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.utilities.missing Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -o /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGILL; if (i); ; return 0; } sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -fPIC -g /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -fPIC -g /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.utilities.missing Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -o /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGINT; if (i); ; return 0; } sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -fPIC -g /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -fPIC -g /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.utilities.missing Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -o /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGKILL; if (i); ; return 0; } sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -fPIC -g /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -fPIC -g /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.utilities.missing Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -o /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGPIPE; if (i); ; return 0; } sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -fPIC -g /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -fPIC -g /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.utilities.missing Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -o /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGQUIT; if (i); ; return 0; } sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -fPIC -g /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -fPIC -g /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.utilities.missing Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -o /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGSEGV; if (i); ; return 0; } sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -fPIC -g /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -fPIC -g /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.utilities.missing Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -o /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGSTOP; if (i); ; return 0; } sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -fPIC -g /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -fPIC -g /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.utilities.missing Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -o /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGSYS; if (i); ; return 0; } sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -fPIC -g /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -fPIC -g /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.utilities.missing Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -o /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGTERM; if (i); ; return 0; } sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -fPIC -g /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -fPIC -g /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.utilities.missing Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -o /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGTRAP; if (i); ; return 0; } sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -fPIC -g /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -fPIC -g /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.utilities.missing Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -o /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGTSTP; if (i); ; return 0; } sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -fPIC -g /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -fPIC -g /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.utilities.missing Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -o /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGURG; if (i); ; return 0; } sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -fPIC -g /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -fPIC -g /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.utilities.missing Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -o /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGUSR1; if (i); ; return 0; } sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -fPIC -g /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -fPIC -g /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.utilities.missing Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -o /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGUSR2; if (i); ; return 0; } ================================================================================ TEST configureMissingGetdomainnamePrototype from PETSc.utilities.missing(/home/hills/seska-hills/packages/petsc-3.4.2/config/PETSc/utilities/missing.py:88) TESTING: configureMissingGetdomainnamePrototype from PETSc.utilities.missing(config/PETSc/utilities/missing.py:88) sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -fPIC -g /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -fPIC -g /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.utilities.missing Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -o /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" #ifdef PETSC_HAVE_UNISTD_H #include #endif #ifdef PETSC_HAVE_NETDB_H #include #endif int main() { char test[10]; int err = getdomainname(test,10); ; return 0; } Pushing language Cxx sh: mpicxx -c -o /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g -fPIC /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.cc Executing: mpicxx -c -o /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g -fPIC /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.cc sh: Possible ERROR while running compiler: error message = {/tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.cc: In function ‘int main()’: /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.cc:14:5: warning: unused variable ‘err’ [-Wunused-variable] } Source: #include "confdefs.h" #include "conffix.h" #ifdef PETSC_HAVE_UNISTD_H #include #endif #ifdef PETSC_HAVE_NETDB_H #include #endif int main() { char test[10]; int err = getdomainname(test,10); ; return 0; } Pushing language CXX Popping language CXX sh: mpicxx -o /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: mpicxx -o /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Popping language Cxx ================================================================================ TEST configureMissingSrandPrototype from PETSc.utilities.missing(/home/hills/seska-hills/packages/petsc-3.4.2/config/PETSc/utilities/missing.py:110) TESTING: configureMissingSrandPrototype from PETSc.utilities.missing(config/PETSc/utilities/missing.py:110) sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -fPIC -g /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -fPIC -g /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.utilities.missing Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -o /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" #ifdef PETSC_HAVE_STDLIB_H #include #endif int main() { double a; long b=10; srand(b); a=drand48(); ; return 0; } Pushing language Cxx sh: mpicxx -c -o /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g -fPIC /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.cc Executing: mpicxx -c -o /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g -fPIC /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.cc sh: Possible ERROR while running compiler: error message = {/tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.cc: In function ‘int main()’: /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.cc:10:8: warning: variable ‘a’ set but not used [-Wunused-but-set-variable] } Source: #include "confdefs.h" #include "conffix.h" #ifdef PETSC_HAVE_STDLIB_H #include #endif int main() { double a; long b=10; srand(b); a=drand48(); ; return 0; } Pushing language CXX Popping language CXX sh: mpicxx -o /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: mpicxx -o /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g /tmp/petsc-U9YCMv/PETSc.utilities.missing/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Popping language Cxx ================================================================================ TEST configureMissingIntelFastPrototypes from PETSc.utilities.missing(/home/hills/seska-hills/packages/petsc-3.4.2/config/PETSc/utilities/missing.py:134) TESTING: configureMissingIntelFastPrototypes from PETSc.utilities.missing(config/PETSc/utilities/missing.py:134) ================================================================================ TEST configureTimers from PETSc.utilities.timer(/home/hills/seska-hills/packages/petsc-3.4.2/config/PETSc/utilities/timer.py:35) TESTING: configureTimers from PETSc.utilities.timer(config/PETSc/utilities/timer.py:35) Sets PETSC_HAVE_FAST_MPI_WTIME PETSC_USE_READ_REAL_TIME PETSC_USE_MICROSOFT_TIME. Checking for function MPI_CRAY_barrier in library [''] [] Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.libraries/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -o /tmp/petsc-U9YCMv/config.libraries/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPI_CRAY_barrier(); int main() { MPI_CRAY_barrier() ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Possible ERROR while running linker: /tmp/petsc-U9YCMv/config.libraries/conftest.o: In function `main': /tmp/petsc-U9YCMv/config.libraries/conftest.c:7: undefined reference to `MPI_CRAY_barrier' collect2: error: ld returned 1 exit status /tmp/petsc-U9YCMv/config.libraries/conftest.o: In function `main': /tmp/petsc-U9YCMv/config.libraries/conftest.c:7: undefined reference to `MPI_CRAY_barrier' collect2: error: ld returned 1 exit status make: *** [all] Error 1 output: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt ret = 256 error message = {/tmp/petsc-U9YCMv/config.libraries/conftest.o: In function `main': /tmp/petsc-U9YCMv/config.libraries/conftest.c:7: undefined reference to `MPI_CRAY_barrier' collect2: error: ld returned 1 exit status /tmp/petsc-U9YCMv/config.libraries/conftest.o: In function `main': /tmp/petsc-U9YCMv/config.libraries/conftest.c:7: undefined reference to `MPI_CRAY_barrier' collect2: error: ld returned 1 exit status make: *** [all] Error 1 } Pushing language C Popping language C in tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPI_CRAY_barrier(); int main() { MPI_CRAY_barrier() ; return 0; } Popping language C Cray-MPI test failure ================================================================================ TEST configureFortranCommandLine from PETSc.utilities.fortranCommandLine(/home/hills/seska-hills/packages/petsc-3.4.2/config/PETSc/utilities/fortranCommandLine.py:27) TESTING: configureFortranCommandLine from PETSc.utilities.fortranCommandLine(config/PETSc/utilities/fortranCommandLine.py:27) Check for the mechanism to retrieve command line arguments in Fortran Pushing language FC Checking for function in library [''] [] Pushing language FC sh: mpif90 -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.types -fPIC -Wall -Wno-unused-variable -Wno-unused-dummy-argument -g /tmp/petsc-U9YCMv/config.libraries/conftest.F Executing: mpif90 -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.types -fPIC -Wall -Wno-unused-variable -Wno-unused-dummy-argument -g /tmp/petsc-U9YCMv/config.libraries/conftest.F sh: Successful compile: Source: program main integer i character*(80) arg call get_command_argument(i,arg) end Pushing language FC Popping language FC sh: mpif90 -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -Wall -Wno-unused-variable -Wno-unused-dummy-argument -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: mpif90 -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -Wall -Wno-unused-variable -Wno-unused-dummy-argument -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Popping language FC Defined "HAVE_FORTRAN_GET_COMMAND_ARGUMENT" to "1" Popping language FC Pushing language C Checking for function get_command_argument_ in library [''] ['-Wl,-rpath,/home/hills/seska/packages/openmpi/lib', '-L/home/hills/seska/packages/openmpi/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib', '-L/home/hills/seska/packages/tau/x86_64/lib', '-Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7', '-L/usr/lib/gcc/x86_64-linux-gnu/4.7', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-Wl,-rpath,/usr/lib/x86_64-linux-gnu', '-L/usr/lib/x86_64-linux-gnu', '-Wl,-rpath,/lib/x86_64-linux-gnu', '-L/lib/x86_64-linux-gnu', '-lmpichf90', '-lgfortran', '-lm', '-Wl,-rpath,/home/hills/seska/packages/openmpi/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib', '-Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-Wl,-rpath,/usr/lib/x86_64-linux-gnu', '-Wl,-rpath,/lib/x86_64-linux-gnu', '-lgfortran', '-lm', '-lquadmath', '-lm'] Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.libraries/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -o /tmp/petsc-U9YCMv/config.libraries/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char get_command_argument_(); int main() { get_command_argument_() ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Possible ERROR while running linker: /tmp/petsc-U9YCMv/config.libraries/conftest.o: In function `main': /tmp/petsc-U9YCMv/config.libraries/conftest.c:7: undefined reference to `get_command_argument_' collect2: error: ld returned 1 exit status /tmp/petsc-U9YCMv/config.libraries/conftest.o: In function `main': /tmp/petsc-U9YCMv/config.libraries/conftest.c:7: undefined reference to `get_command_argument_' collect2: error: ld returned 1 exit status make: *** [all] Error 1 output: Debug: Moving these libraries to the end of the link line: -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt ret = 256 error message = {/tmp/petsc-U9YCMv/config.libraries/conftest.o: In function `main': /tmp/petsc-U9YCMv/config.libraries/conftest.c:7: undefined reference to `get_command_argument_' collect2: error: ld returned 1 exit status /tmp/petsc-U9YCMv/config.libraries/conftest.o: In function `main': /tmp/petsc-U9YCMv/config.libraries/conftest.c:7: undefined reference to `get_command_argument_' collect2: error: ld returned 1 exit status make: *** [all] Error 1 } Pushing language C Popping language C in tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char get_command_argument_(); int main() { get_command_argument_() ; return 0; } Popping language C Checking for function getarg_ in library [''] ['-Wl,-rpath,/home/hills/seska/packages/openmpi/lib', '-L/home/hills/seska/packages/openmpi/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib', '-L/home/hills/seska/packages/tau/x86_64/lib', '-Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7', '-L/usr/lib/gcc/x86_64-linux-gnu/4.7', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-Wl,-rpath,/usr/lib/x86_64-linux-gnu', '-L/usr/lib/x86_64-linux-gnu', '-Wl,-rpath,/lib/x86_64-linux-gnu', '-L/lib/x86_64-linux-gnu', '-lmpichf90', '-lgfortran', '-lm', '-Wl,-rpath,/home/hills/seska/packages/openmpi/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib', '-Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-Wl,-rpath,/usr/lib/x86_64-linux-gnu', '-Wl,-rpath,/lib/x86_64-linux-gnu', '-lgfortran', '-lm', '-lquadmath', '-lm'] Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.libraries/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -o /tmp/petsc-U9YCMv/config.libraries/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char getarg_(); int main() { getarg_() ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Possible ERROR while running linker: /tmp/petsc-U9YCMv/config.libraries/conftest.o: In function `main': /tmp/petsc-U9YCMv/config.libraries/conftest.c:7: undefined reference to `getarg_' collect2: error: ld returned 1 exit status /tmp/petsc-U9YCMv/config.libraries/conftest.o: In function `main': /tmp/petsc-U9YCMv/config.libraries/conftest.c:7: undefined reference to `getarg_' collect2: error: ld returned 1 exit status make: *** [all] Error 1 output: Debug: Moving these libraries to the end of the link line: -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt ret = 256 error message = {/tmp/petsc-U9YCMv/config.libraries/conftest.o: In function `main': /tmp/petsc-U9YCMv/config.libraries/conftest.c:7: undefined reference to `getarg_' collect2: error: ld returned 1 exit status /tmp/petsc-U9YCMv/config.libraries/conftest.o: In function `main': /tmp/petsc-U9YCMv/config.libraries/conftest.c:7: undefined reference to `getarg_' collect2: error: ld returned 1 exit status make: *** [all] Error 1 } Pushing language C Popping language C in tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char getarg_(); int main() { getarg_() ; return 0; } Popping language C Checking for function ipxfargc_ sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.functions/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.functions/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char ipxfargc_(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char ipxfargc_(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_ipxfargc_) || defined (__stub___ipxfargc_) choke me #else ipxfargc_(); #endif ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt -lmpichf90 Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt -lmpichf90 Error: Tried looking for file: /tmp/petsc-U9YCMv/config.functions/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt -lmpichf90 Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt -lmpichf90 Error: Tried looking for file: /tmp/petsc-U9YCMv/config.functions/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt -lmpichf90 Possible ERROR while running linker: /tmp/petsc-U9YCMv/config.functions/conftest.o: In function `main': /tmp/petsc-U9YCMv/config.functions/conftest.c:20: undefined reference to `ipxfargc_' collect2: error: ld returned 1 exit status /tmp/petsc-U9YCMv/config.functions/conftest.o: In function `main': /tmp/petsc-U9YCMv/config.functions/conftest.c:20: undefined reference to `ipxfargc_' collect2: error: ld returned 1 exit status make: *** [all] Error 1 output: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt -lmpichf90 Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt -lmpichf90 Error: Tried looking for file: /tmp/petsc-U9YCMv/config.functions/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt -lmpichf90 Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt -lmpichf90 Error: Tried looking for file: /tmp/petsc-U9YCMv/config.functions/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt -lmpichf90 ret = 256 error message = {/tmp/petsc-U9YCMv/config.functions/conftest.o: In function `main': /tmp/petsc-U9YCMv/config.functions/conftest.c:20: undefined reference to `ipxfargc_' collect2: error: ld returned 1 exit status /tmp/petsc-U9YCMv/config.functions/conftest.o: In function `main': /tmp/petsc-U9YCMv/config.functions/conftest.c:20: undefined reference to `ipxfargc_' collect2: error: ld returned 1 exit status make: *** [all] Error 1 } Pushing language C Popping language C in tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char ipxfargc_(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char ipxfargc_(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_ipxfargc_) || defined (__stub___ipxfargc_) choke me #else ipxfargc_(); #endif ; return 0; } Checking for function f90_unix_MP_iargc sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.functions/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.functions/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char f90_unix_MP_iargc(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char f90_unix_MP_iargc(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_f90_unix_MP_iargc) || defined (__stub___f90_unix_MP_iargc) choke me #else f90_unix_MP_iargc(); #endif ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt -lmpichf90 Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt -lmpichf90 Error: Tried looking for file: /tmp/petsc-U9YCMv/config.functions/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt -lmpichf90 Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt -lmpichf90 Error: Tried looking for file: /tmp/petsc-U9YCMv/config.functions/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt -lmpichf90 Possible ERROR while running linker: /tmp/petsc-U9YCMv/config.functions/conftest.o: In function `main': /tmp/petsc-U9YCMv/config.functions/conftest.c:20: undefined reference to `f90_unix_MP_iargc' collect2: error: ld returned 1 exit status /tmp/petsc-U9YCMv/config.functions/conftest.o: In function `main': /tmp/petsc-U9YCMv/config.functions/conftest.c:20: undefined reference to `f90_unix_MP_iargc' collect2: error: ld returned 1 exit status make: *** [all] Error 1 output: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt -lmpichf90 Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt -lmpichf90 Error: Tried looking for file: /tmp/petsc-U9YCMv/config.functions/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt -lmpichf90 Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt -lmpichf90 Error: Tried looking for file: /tmp/petsc-U9YCMv/config.functions/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt -lmpichf90 ret = 256 error message = {/tmp/petsc-U9YCMv/config.functions/conftest.o: In function `main': /tmp/petsc-U9YCMv/config.functions/conftest.c:20: undefined reference to `f90_unix_MP_iargc' collect2: error: ld returned 1 exit status /tmp/petsc-U9YCMv/config.functions/conftest.o: In function `main': /tmp/petsc-U9YCMv/config.functions/conftest.c:20: undefined reference to `f90_unix_MP_iargc' collect2: error: ld returned 1 exit status make: *** [all] Error 1 } Pushing language C Popping language C in tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char f90_unix_MP_iargc(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char f90_unix_MP_iargc(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_f90_unix_MP_iargc) || defined (__stub___f90_unix_MP_iargc) choke me #else f90_unix_MP_iargc(); #endif ; return 0; } Checking for function PXFGETARG sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.functions/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.functions/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char PXFGETARG(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char PXFGETARG(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_PXFGETARG) || defined (__stub___PXFGETARG) choke me #else PXFGETARG(); #endif ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt -lmpichf90 Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt -lmpichf90 Error: Tried looking for file: /tmp/petsc-U9YCMv/config.functions/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt -lmpichf90 Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt -lmpichf90 Error: Tried looking for file: /tmp/petsc-U9YCMv/config.functions/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt -lmpichf90 Possible ERROR while running linker: /tmp/petsc-U9YCMv/config.functions/conftest.o: In function `main': /tmp/petsc-U9YCMv/config.functions/conftest.c:20: undefined reference to `PXFGETARG' collect2: error: ld returned 1 exit status /tmp/petsc-U9YCMv/config.functions/conftest.o: In function `main': /tmp/petsc-U9YCMv/config.functions/conftest.c:20: undefined reference to `PXFGETARG' collect2: error: ld returned 1 exit status make: *** [all] Error 1 output: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt -lmpichf90 Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt -lmpichf90 Error: Tried looking for file: /tmp/petsc-U9YCMv/config.functions/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt -lmpichf90 Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt -lmpichf90 Error: Tried looking for file: /tmp/petsc-U9YCMv/config.functions/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt -lmpichf90 ret = 256 error message = {/tmp/petsc-U9YCMv/config.functions/conftest.o: In function `main': /tmp/petsc-U9YCMv/config.functions/conftest.c:20: undefined reference to `PXFGETARG' collect2: error: ld returned 1 exit status /tmp/petsc-U9YCMv/config.functions/conftest.o: In function `main': /tmp/petsc-U9YCMv/config.functions/conftest.c:20: undefined reference to `PXFGETARG' collect2: error: ld returned 1 exit status make: *** [all] Error 1 } Pushing language C Popping language C in tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char PXFGETARG(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char PXFGETARG(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_PXFGETARG) || defined (__stub___PXFGETARG) choke me #else PXFGETARG(); #endif ; return 0; } Checking for function iargc_ sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.functions/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.functions/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char iargc_(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char iargc_(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_iargc_) || defined (__stub___iargc_) choke me #else iargc_(); #endif ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt -lmpichf90 Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt -lmpichf90 Error: Tried looking for file: /tmp/petsc-U9YCMv/config.functions/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt -lmpichf90 Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt -lmpichf90 Error: Tried looking for file: /tmp/petsc-U9YCMv/config.functions/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt -lmpichf90 Possible ERROR while running linker: /tmp/petsc-U9YCMv/config.functions/conftest.o: In function `main': /tmp/petsc-U9YCMv/config.functions/conftest.c:20: undefined reference to `iargc_' collect2: error: ld returned 1 exit status /tmp/petsc-U9YCMv/config.functions/conftest.o: In function `main': /tmp/petsc-U9YCMv/config.functions/conftest.c:20: undefined reference to `iargc_' collect2: error: ld returned 1 exit status make: *** [all] Error 1 output: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt -lmpichf90 Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt -lmpichf90 Error: Tried looking for file: /tmp/petsc-U9YCMv/config.functions/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt -lmpichf90 Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt -lmpichf90 Error: Tried looking for file: /tmp/petsc-U9YCMv/config.functions/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt -lmpichf90 ret = 256 error message = {/tmp/petsc-U9YCMv/config.functions/conftest.o: In function `main': /tmp/petsc-U9YCMv/config.functions/conftest.c:20: undefined reference to `iargc_' collect2: error: ld returned 1 exit status /tmp/petsc-U9YCMv/config.functions/conftest.o: In function `main': /tmp/petsc-U9YCMv/config.functions/conftest.c:20: undefined reference to `iargc_' collect2: error: ld returned 1 exit status make: *** [all] Error 1 } Pushing language C Popping language C in tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char iargc_(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char iargc_(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_iargc_) || defined (__stub___iargc_) choke me #else iargc_(); #endif ; return 0; } Checking for function GETARG@16 sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.functions/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions PDT: Error: Couldn't create conftest.pdb: Trying the alternate PDT Rose parser based on EDG 4.4: /home/hills/seska/packages/pdt/x86_64//bin/edg44-c-roseparse /tmp/petsc-U9YCMv/config.functions/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions PDT: Error parsing input file /tmp/petsc-U9YCMv/config.functions/conftest.c Trying Older PDT Rose parser based on EDG 3.3: /home/hills/seska/packages/pdt/x86_64//bin/roseparse /tmp/petsc-U9YCMv/config.functions/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions PDT: Error parsing input file /tmp/petsc-U9YCMv/config.functions/conftest.c Error: Command(Executable) is -- Error: Full Command attempted is -- /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.functions/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Error: Compilation Failed Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -c -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Possible ERROR while running compiler: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.functions/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions PDT: Error: Couldn't create conftest.pdb: Trying the alternate PDT Rose parser based on EDG 4.4: /home/hills/seska/packages/pdt/x86_64//bin/edg44-c-roseparse /tmp/petsc-U9YCMv/config.functions/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions PDT: Error parsing input file /tmp/petsc-U9YCMv/config.functions/conftest.c Trying Older PDT Rose parser based on EDG 3.3: /home/hills/seska/packages/pdt/x86_64//bin/roseparse /tmp/petsc-U9YCMv/config.functions/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions PDT: Error parsing input file /tmp/petsc-U9YCMv/config.functions/conftest.c Error: Command(Executable) is -- Error: Full Command attempted is -- /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.functions/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Error: Compilation Failed Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -c -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue ret = 256 error message = {"/tmp/petsc-U9YCMv/config.functions/conftest.c", line 10: error: unrecognized token char GETARG@16(); ^ "/tmp/petsc-U9YCMv/config.functions/conftest.c", line 10: error: expected a ";" char GETARG@16(); ^ "/tmp/petsc-U9YCMv/config.functions/conftest.c", line 17: error: unrecognized token #if defined (__stub_GETARG@16) || defined (__stub___GETARG@16) ^ "/tmp/petsc-U9YCMv/config.functions/conftest.c", line 17: error: expected a ")" #if defined (__stub_GETARG@16) || defined (__stub___GETARG@16) ^ "/tmp/petsc-U9YCMv/config.functions/conftest.c", line 17: error: extra text after expected end of preprocessing directive #if defined (__stub_GETARG@16) || defined (__stub___GETARG@16) ^ "/tmp/petsc-U9YCMv/config.functions/conftest.c", line 20: error: unrecognized token GETARG@16(); ^ "/tmp/petsc-U9YCMv/config.functions/conftest.c", line 20: warning: expression has no effect GETARG@16(); ^ "/tmp/petsc-U9YCMv/config.functions/conftest.c", line 20: error: expected a ";" GETARG@16(); ^ 7 errors detected in the compilation of "/tmp/petsc-U9YCMv/config.functions/conftest.c". "/tmp/petsc-U9YCMv/config.functions/conftest.c", line 10: error: unrecognized token char GETARG@16(); ^ "/tmp/petsc-U9YCMv/config.functions/conftest.c", line 10: error: expected a ";" char GETARG@16(); ^ "/tmp/petsc-U9YCMv/config.functions/conftest.c", line 17: error: unrecognized token #if defined (__stub_GETARG@16) || defined (__stub___GETARG@16) ^ "/tmp/petsc-U9YCMv/config.functions/conftest.c", line 17: error: expected a ")" #if defined (__stub_GETARG@16) || defined (__stub___GETARG@16) ^ "/tmp/petsc-U9YCMv/config.functions/conftest.c", line 17: error: extra text after expected end of preprocessing directive #if defined (__stub_GETARG@16) || defined (__stub___GETARG@16) ^ "/tmp/petsc-U9YCMv/config.functions/conftest.c", line 20: error: unrecognized token GETARG@16(); ^ "/tmp/petsc-U9YCMv/config.functions/conftest.c", line 20: warning: expression has no effect GETARG@16(); ^ "/tmp/petsc-U9YCMv/config.functions/conftest.c", line 20: error: expected a ";" GETARG@16(); ^ terminate called after throwing an instance of 'rose_exception' what(): Errors in Processing: (frontend_failed) Aborted (core dumped) "/tmp/petsc-U9YCMv/config.functions/conftest.c", line 10: error: unrecognized token char GETARG@16(); ^ "/tmp/petsc-U9YCMv/config.functions/conftest.c", line 10: error: expected a ";" char GETARG@16(); ^ "/tmp/petsc-U9YCMv/config.functions/conftest.c", line 17: error: unrecognized token #if defined (__stub_GETARG@16) || defined (__stub___GETARG@16) ^ "/tmp/petsc-U9YCMv/config.functions/conftest.c", line 17: error: expected a ")" #if defined (__stub_GETARG@16) || defined (__stub___GETARG@16) ^ "/tmp/petsc-U9YCMv/config.functions/conftest.c", line 17: error: extra text after expected end of preprocessing directive #if defined (__stub_GETARG@16) || defined (__stub___GETARG@16) ^ "/tmp/petsc-U9YCMv/config.functions/conftest.c", line 20: error: unrecognized token GETARG@16(); ^ "/tmp/petsc-U9YCMv/config.functions/conftest.c", line 20: warning: expression has no effect GETARG@16(); ^ "/tmp/petsc-U9YCMv/config.functions/conftest.c", line 20: error: expected a ";" GETARG@16(); ^ terminate called after throwing an instance of 'rose_exception' what(): Errors in Processing: (frontend_failed) Aborted (core dumped) /tmp/petsc-U9YCMv/config.functions/conftest.c:10:1: error: stray ‘@’ in program /tmp/petsc-U9YCMv/config.functions/conftest.c:10:13: error: expected ‘=’, ‘,’, ‘;’, ‘asm’ or ‘__attribute__’ before numeric constant /tmp/petsc-U9YCMv/config.functions/conftest.c: In function ‘main’: /tmp/petsc-U9YCMv/config.functions/conftest.c:17:27: error: missing ')' after "defined" /tmp/petsc-U9YCMv/config.functions/conftest.c:17:28: error: missing binary operator before token "16" /tmp/petsc-U9YCMv/config.functions/conftest.c:20:1: error: stray ‘@’ in program /tmp/petsc-U9YCMv/config.functions/conftest.c:20:1: error: ‘GETARG’ undeclared (first use in this function) /tmp/petsc-U9YCMv/config.functions/conftest.c:20:1: note: each undeclared identifier is reported only once for each function it appears in /tmp/petsc-U9YCMv/config.functions/conftest.c:20:8: error: expected ‘;’ before numeric constant make: *** [all] Error 1 } Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char GETARG@16(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char GETARG@16(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_GETARG@16) || defined (__stub___GETARG@16) choke me #else GETARG@16(); #endif ; return 0; } Compile failed inside link Checking for function _gfortran_iargc sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.functions/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.functions/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.functions/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.functions -o /tmp/petsc-U9YCMv/config.functions/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char _gfortran_iargc(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _gfortran_iargc(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub__gfortran_iargc) || defined (__stub____gfortran_iargc) choke me #else _gfortran_iargc(); #endif ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt -lmpichf90 Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.functions/conftest -fPIC -g /tmp/petsc-U9YCMv/config.functions/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt -lmpichf90 Defined "HAVE__GFORTRAN_IARGC" to "1" Defined "HAVE_GFORTRAN_IARGC" to "1" Popping language C ================================================================================ TEST configureScalarType from PETSc.utilities.scalarTypes(/home/hills/seska-hills/packages/petsc-3.4.2/config/PETSc/utilities/scalarTypes.py:37) TESTING: configureScalarType from PETSc.utilities.scalarTypes(config/PETSc/utilities/scalarTypes.py:37) Choose between real and complex numbers Defined "USE_SCALAR_REAL" to "1" Scalar type is real Pushing language C All intermediate test results are stored in /tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -o /tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { double b = 2.0; int a = isnan(b); ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes/conftest -fPIC -g /tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes/conftest -fPIC -g /tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes/conftest -fPIC -g /tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Defined "HAVE_ISNAN" to "1" sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -fPIC -g /tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -fPIC -g /tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -o /tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { double b = 2.0; int a = isinf(b); ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes/conftest -fPIC -g /tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes/conftest -fPIC -g /tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes/conftest -fPIC -g /tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Defined "HAVE_ISINF" to "1" sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -fPIC -g /tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -fPIC -g /tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes/conftest.c -o conftest.inst.c -c Error: Tried Looking for file: conftest.inst.c Error: Command(Executable) is -- /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor Error: Full Command attempted is -- /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes/conftest.c -o conftest.inst.c -c Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g /tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes/conftest.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -o /tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes/conftest.o Looking for file: conftest.o Possible ERROR while running compiler: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes/conftest.c -o conftest.inst.c -c Error: Tried Looking for file: conftest.inst.c Error: Command(Executable) is -- /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor Error: Full Command attempted is -- /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes/conftest.c -o conftest.inst.c -c Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g /tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes/conftest.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -o /tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes/conftest.o Looking for file: conftest.o error message = {Segmentation fault (core dumped) /home/hills/seska/packages/tau/x86_64/bin/tau_compiler.sh: line 198: 5931 Segmentation fault (core dumped) /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes/conftest.c -o conftest.inst.c -c } Source: #include "confdefs.h" #include "conffix.h" #include int main() { double b = 2.0;int a = _isnan(b); ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes/conftest -fPIC -g /tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes/conftest -fPIC -g /tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes/conftest -fPIC -g /tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes/conftest -fPIC -g /tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes/conftest -fPIC -g /tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes/conftest -fPIC -g /tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Possible ERROR while running linker: /tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes/conftest.o: In function `main': /tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes/conftest.c:6: undefined reference to `_isnan' collect2: error: ld returned 1 exit status /tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes/conftest.o: In function `main': /tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes/conftest.c:6: undefined reference to `_isnan' collect2: error: ld returned 1 exit status make: *** [all] Error 1 output: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes/conftest -fPIC -g /tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes/conftest -fPIC -g /tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes/conftest -fPIC -g /tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes/conftest -fPIC -g /tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt ret = 256 error message = {/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes/conftest.o: In function `main': /tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes/conftest.c:6: undefined reference to `_isnan' collect2: error: ld returned 1 exit status /tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes/conftest.o: In function `main': /tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes/conftest.c:6: undefined reference to `_isnan' collect2: error: ld returned 1 exit status make: *** [all] Error 1 } Pushing language C Popping language C in tau_cc.sh -o /tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes/conftest -fPIC -g /tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Source: #include "confdefs.h" #include "conffix.h" #include int main() { double b = 2.0;int a = _isnan(b); ; return 0; } sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -fPIC -g /tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -fPIC -g /tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes/conftest.c -o conftest.inst.c -c Error: Tried Looking for file: conftest.inst.c Error: Command(Executable) is -- /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor Error: Full Command attempted is -- /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes/conftest.c -o conftest.inst.c -c Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g /tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes/conftest.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -o /tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes/conftest.o Looking for file: conftest.o Possible ERROR while running compiler: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes/conftest.c -o conftest.inst.c -c Error: Tried Looking for file: conftest.inst.c Error: Command(Executable) is -- /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor Error: Full Command attempted is -- /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes/conftest.c -o conftest.inst.c -c Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g /tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes/conftest.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -o /tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes/conftest.o Looking for file: conftest.o error message = {Segmentation fault (core dumped) /home/hills/seska/packages/tau/x86_64/bin/tau_compiler.sh: line 198: 6718 Segmentation fault (core dumped) /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes/conftest.c -o conftest.inst.c -c } Source: #include "confdefs.h" #include "conffix.h" #include int main() { double b = 2.0;int a = _finite(b); ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes/conftest -fPIC -g /tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes/conftest -fPIC -g /tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes/conftest -fPIC -g /tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes/conftest -fPIC -g /tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes/conftest -fPIC -g /tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes/conftest -fPIC -g /tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Possible ERROR while running linker: /tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes/conftest.o: In function `main': /tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes/conftest.c:6: undefined reference to `_finite' collect2: error: ld returned 1 exit status /tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes/conftest.o: In function `main': /tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes/conftest.c:6: undefined reference to `_finite' collect2: error: ld returned 1 exit status make: *** [all] Error 1 output: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes/conftest -fPIC -g /tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes/conftest -fPIC -g /tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes/conftest -fPIC -g /tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes/conftest -fPIC -g /tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt ret = 256 error message = {/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes/conftest.o: In function `main': /tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes/conftest.c:6: undefined reference to `_finite' collect2: error: ld returned 1 exit status /tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes/conftest.o: In function `main': /tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes/conftest.c:6: undefined reference to `_finite' collect2: error: ld returned 1 exit status make: *** [all] Error 1 } Pushing language C Popping language C in tau_cc.sh -o /tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes/conftest -fPIC -g /tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Source: #include "confdefs.h" #include "conffix.h" #include int main() { double b = 2.0;int a = _finite(b); ; return 0; } Popping language C ================================================================================ TEST configurePrecision from PETSc.utilities.scalarTypes(/home/hills/seska-hills/packages/petsc-3.4.2/config/PETSc/utilities/scalarTypes.py:73) TESTING: configurePrecision from PETSc.utilities.scalarTypes(config/PETSc/utilities/scalarTypes.py:73) Set the default real number precision for PETSc objects Defined "USE_REAL_DOUBLE" to "1" Precision is double ================================================================================ TEST configureLibraryOptions from PETSc.utilities.libraryOptions(/home/hills/seska-hills/packages/petsc-3.4.2/config/PETSc/utilities/libraryOptions.py:48) TESTING: configureLibraryOptions from PETSc.utilities.libraryOptions(config/PETSc/utilities/libraryOptions.py:48) Sets PETSC_USE_DEBUG, PETSC_USE_INFO, PETSC_USE_LOG, PETSC_USE_CTABLE and PETSC_USE_FORTRAN_KERNELS Defined "USE_LOG" to "1" Defined "USE_DEBUG" to "1" Defined "USE_INFO" to "1" Defined "USE_CTABLE" to "1" **********Checking if running on BGL/IBM detected Checking for function bgl_perfctr_void in library [''] [] Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.libraries/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -o /tmp/petsc-U9YCMv/config.libraries/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char bgl_perfctr_void(); int main() { bgl_perfctr_void() ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Possible ERROR while running linker: /tmp/petsc-U9YCMv/config.libraries/conftest.o: In function `main': /tmp/petsc-U9YCMv/config.libraries/conftest.c:7: undefined reference to `bgl_perfctr_void' collect2: error: ld returned 1 exit status /tmp/petsc-U9YCMv/config.libraries/conftest.o: In function `main': /tmp/petsc-U9YCMv/config.libraries/conftest.c:7: undefined reference to `bgl_perfctr_void' collect2: error: ld returned 1 exit status make: *** [all] Error 1 output: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt ret = 256 error message = {/tmp/petsc-U9YCMv/config.libraries/conftest.o: In function `main': /tmp/petsc-U9YCMv/config.libraries/conftest.c:7: undefined reference to `bgl_perfctr_void' collect2: error: ld returned 1 exit status /tmp/petsc-U9YCMv/config.libraries/conftest.o: In function `main': /tmp/petsc-U9YCMv/config.libraries/conftest.c:7: undefined reference to `bgl_perfctr_void' collect2: error: ld returned 1 exit status make: *** [all] Error 1 } Pushing language C Popping language C in tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char bgl_perfctr_void(); int main() { bgl_perfctr_void() ; return 0; } Popping language C Checking for function ADIOI_BGL_Open in library [''] [] Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.libraries/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -o /tmp/petsc-U9YCMv/config.libraries/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char ADIOI_BGL_Open(); int main() { ADIOI_BGL_Open() ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Possible ERROR while running linker: /tmp/petsc-U9YCMv/config.libraries/conftest.o: In function `main': /tmp/petsc-U9YCMv/config.libraries/conftest.c:7: undefined reference to `ADIOI_BGL_Open' collect2: error: ld returned 1 exit status /tmp/petsc-U9YCMv/config.libraries/conftest.o: In function `main': /tmp/petsc-U9YCMv/config.libraries/conftest.c:7: undefined reference to `ADIOI_BGL_Open' collect2: error: ld returned 1 exit status make: *** [all] Error 1 output: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt ret = 256 error message = {/tmp/petsc-U9YCMv/config.libraries/conftest.o: In function `main': /tmp/petsc-U9YCMv/config.libraries/conftest.c:7: undefined reference to `ADIOI_BGL_Open' collect2: error: ld returned 1 exit status /tmp/petsc-U9YCMv/config.libraries/conftest.o: In function `main': /tmp/petsc-U9YCMv/config.libraries/conftest.c:7: undefined reference to `ADIOI_BGL_Open' collect2: error: ld returned 1 exit status make: *** [all] Error 1 } Pushing language C Popping language C in tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char ADIOI_BGL_Open(); int main() { ADIOI_BGL_Open() ; return 0; } Popping language C *********BGL/IBM test failure Defined "USE_BACKWARD_LOOP" to "1" Defined "Alignx(a,b)" to " " ================================================================================ TEST configureISColorValueType from PETSc.utilities.libraryOptions(/home/hills/seska-hills/packages/petsc-3.4.2/config/PETSc/utilities/libraryOptions.py:92) TESTING: configureISColorValueType from PETSc.utilities.libraryOptions(config/PETSc/utilities/libraryOptions.py:92) Sets PETSC_IS_COLOR_VALUE_TYPE, MPIU_COLORING_VALUE, IS_COLORING_MAX required by ISColor Defined "MPIU_COLORING_VALUE" to "MPI_UNSIGNED_SHORT" Defined "IS_COLORING_MAX" to "65535" Defined "IS_COLOR_VALUE_TYPE" to "short" Pushing language C ================================================================================ TEST configureLibrary from config.packages.MPI(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/packages/MPI.py:744) TESTING: configureLibrary from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:744) Calls the regular package configureLibrary and then does an additional test needed by MPI ================================================================================== Checking for a functional MPI Checking for library in Package specific search directory MPI: [] ================================================================================ TEST check from config.libraries(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/libraries.py:145) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:145) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for function MPI_Init in library [] [] Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.libraries/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -o /tmp/petsc-U9YCMv/config.libraries/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPI_Init(); int main() { MPI_Init() ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Popping language C Checking for function MPI_Comm_create in library [] [] Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.libraries/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -o /tmp/petsc-U9YCMv/config.libraries/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPI_Comm_create(); int main() { MPI_Comm_create() ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Popping language C Checking for headers Package specific search directory MPI: ['/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include'] Pushing language C ================================================================================ TEST checkInclude from config.headers(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/headers.py:86) TESTING: checkInclude from config.headers(config/BuildSystem/config/headers.py:86) Checks if a particular include file can be found along particular include paths Checking for header files ['mpi.h'] in ['/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include'] Checking include with compiler flags var CPPFLAGS ['/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include'] sh: tau_cc.sh -E -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.headers -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include /tmp/petsc-U9YCMv/config.headers/conftest.c Executing: tau_cc.sh -E -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.headers -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include /tmp/petsc-U9YCMv/config.headers/conftest.c sh: # 1 "/tmp/petsc-U9YCMv/config.headers/conftest.c" # 1 "" # 1 "/tmp/petsc-U9YCMv/config.headers/conftest.c" # 1 "/tmp/petsc-U9YCMv/config.headers/confdefs.h" 1 # 2 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 # 1 "/tmp/petsc-U9YCMv/config.headers/conffix.h" 1 # 3 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 # 1 "/home/hills/seska/packages/openmpi/include/mpi.h" 1 # 220 "/home/hills/seska/packages/openmpi/include/mpi.h" # 1 "/usr/lib/gcc/x86_64-linux-gnu/4.7/include/stddef.h" 1 3 4 # 150 "/usr/lib/gcc/x86_64-linux-gnu/4.7/include/stddef.h" 3 4 typedef long int ptrdiff_t; # 213 "/usr/lib/gcc/x86_64-linux-gnu/4.7/include/stddef.h" 3 4 typedef long unsigned int size_t; # 325 "/usr/lib/gcc/x86_64-linux-gnu/4.7/include/stddef.h" 3 4 typedef int wchar_t; # 221 "/home/hills/seska/packages/openmpi/include/mpi.h" 2 # 253 "/home/hills/seska/packages/openmpi/include/mpi.h" # 1 "/home/hills/seska/packages/openmpi/include/mpi_portable_platform.h" 1 # 254 "/home/hills/seska/packages/openmpi/include/mpi.h" 2 # 317 "/home/hills/seska/packages/openmpi/include/mpi.h" typedef ptrdiff_t MPI_Aint; typedef long long MPI_Offset; typedef struct ompi_communicator_t *MPI_Comm; typedef struct ompi_datatype_t *MPI_Datatype; typedef struct ompi_errhandler_t *MPI_Errhandler; typedef struct ompi_file_t *MPI_File; typedef struct ompi_group_t *MPI_Group; typedef struct ompi_info_t *MPI_Info; typedef struct ompi_op_t *MPI_Op; typedef struct ompi_request_t *MPI_Request; typedef struct ompi_status_public_t MPI_Status; typedef struct ompi_win_t *MPI_Win; struct ompi_status_public_t { int MPI_SOURCE; int MPI_TAG; int MPI_ERROR; int _cancelled; size_t _ucount; }; typedef struct ompi_status_public_t ompi_status_public_t; # 358 "/home/hills/seska/packages/openmpi/include/mpi.h" typedef int (MPI_Copy_function)(MPI_Comm, int, void *, void *, void *, int *); typedef int (MPI_Delete_function)(MPI_Comm, int, void *, void *); typedef int (MPI_Datarep_extent_function)(MPI_Datatype, MPI_Aint *, void *); typedef int (MPI_Datarep_conversion_function)(void *, MPI_Datatype, int, void *, MPI_Offset, void *); typedef void (MPI_Comm_errhandler_function)(MPI_Comm *, int *, ...); typedef MPI_Comm_errhandler_function MPI_Comm_errhandler_fn ; typedef void (ompi_file_errhandler_fn)(MPI_File *, int *, ...); typedef ompi_file_errhandler_fn MPI_File_errhandler_fn ; typedef ompi_file_errhandler_fn MPI_File_errhandler_function; typedef void (MPI_Win_errhandler_function)(MPI_Win *, int *, ...); typedef MPI_Win_errhandler_function MPI_Win_errhandler_fn ; typedef void (MPI_Handler_function)(MPI_Comm *, int *, ...); typedef void (MPI_User_function)(void *, void *, int *, MPI_Datatype *); typedef int (MPI_Comm_copy_attr_function)(MPI_Comm, int, void *, void *, void *, int *); typedef int (MPI_Comm_delete_attr_function)(MPI_Comm, int, void *, void *); typedef int (MPI_Type_copy_attr_function)(MPI_Datatype, int, void *, void *, void *, int *); typedef int (MPI_Type_delete_attr_function)(MPI_Datatype, int, void *, void *); typedef int (MPI_Win_copy_attr_function)(MPI_Win, int, void *, void *, void *, int *); typedef int (MPI_Win_delete_attr_function)(MPI_Win, int, void *, void *); typedef int (MPI_Grequest_query_function)(void *, MPI_Status *); typedef int (MPI_Grequest_free_function)(void *); typedef int (MPI_Grequest_cancel_function)(void *, int); # 484 "/home/hills/seska/packages/openmpi/include/mpi.h" enum { MPI_TAG_UB, MPI_HOST, MPI_IO, MPI_WTIME_IS_GLOBAL, MPI_APPNUM, MPI_LASTUSEDCODE, MPI_UNIVERSE_SIZE, MPI_WIN_BASE, MPI_WIN_SIZE, MPI_WIN_DISP_UNIT, IMPI_CLIENT_SIZE, IMPI_CLIENT_COLOR, IMPI_HOST_SIZE, IMPI_HOST_COLOR }; # 575 "/home/hills/seska/packages/openmpi/include/mpi.h" enum { MPI_IDENT, MPI_CONGRUENT, MPI_SIMILAR, MPI_UNEQUAL }; enum { MPI_THREAD_SINGLE, MPI_THREAD_FUNNELED, MPI_THREAD_SERIALIZED, MPI_THREAD_MULTIPLE }; enum { MPI_COMBINER_NAMED, MPI_COMBINER_DUP, MPI_COMBINER_CONTIGUOUS, MPI_COMBINER_VECTOR, MPI_COMBINER_HVECTOR_INTEGER, MPI_COMBINER_HVECTOR, MPI_COMBINER_INDEXED, MPI_COMBINER_HINDEXED_INTEGER, MPI_COMBINER_HINDEXED, MPI_COMBINER_INDEXED_BLOCK, MPI_COMBINER_STRUCT_INTEGER, MPI_COMBINER_STRUCT, MPI_COMBINER_SUBARRAY, MPI_COMBINER_DARRAY, MPI_COMBINER_F90_REAL, MPI_COMBINER_F90_COMPLEX, MPI_COMBINER_F90_INTEGER, MPI_COMBINER_RESIZED }; # 678 "/home/hills/seska/packages/openmpi/include/mpi.h" __attribute__((visibility("default"))) int OMPI_C_MPI_TYPE_NULL_DELETE_FN( MPI_Datatype datatype, int type_keyval, void* attribute_val_out, void* extra_state ); __attribute__((visibility("default"))) int OMPI_C_MPI_TYPE_NULL_COPY_FN( MPI_Datatype datatype, int type_keyval, void* extra_state, void* attribute_val_in, void* attribute_val_out, int* flag ); __attribute__((visibility("default"))) int OMPI_C_MPI_TYPE_DUP_FN( MPI_Datatype datatype, int type_keyval, void* extra_state, void* attribute_val_in, void* attribute_val_out, int* flag ); __attribute__((visibility("default"))) int OMPI_C_MPI_COMM_NULL_DELETE_FN( MPI_Comm comm, int comm_keyval, void* attribute_val_out, void* extra_state ); __attribute__((visibility("default"))) int OMPI_C_MPI_COMM_NULL_COPY_FN( MPI_Comm comm, int comm_keyval, void* extra_state, void* attribute_val_in, void* attribute_val_out, int* flag ); __attribute__((visibility("default"))) int OMPI_C_MPI_COMM_DUP_FN( MPI_Comm comm, int comm_keyval, void* extra_state, void* attribute_val_in, void* attribute_val_out, int* flag ); __attribute__((visibility("default"))) int OMPI_C_MPI_NULL_DELETE_FN( MPI_Comm comm, int comm_keyval, void* attribute_val_out, void* extra_state ) ; __attribute__((visibility("default"))) int OMPI_C_MPI_NULL_COPY_FN( MPI_Comm comm, int comm_keyval, void* extra_state, void* attribute_val_in, void* attribute_val_out, int* flag ) ; __attribute__((visibility("default"))) int OMPI_C_MPI_DUP_FN( MPI_Comm comm, int comm_keyval, void* extra_state, void* attribute_val_in, void* attribute_val_out, int* flag ) ; __attribute__((visibility("default"))) int OMPI_C_MPI_WIN_NULL_DELETE_FN( MPI_Win window, int win_keyval, void* attribute_val_out, void* extra_state ); __attribute__((visibility("default"))) int OMPI_C_MPI_WIN_NULL_COPY_FN( MPI_Win window, int win_keyval, void* extra_state, void* attribute_val_in, void* attribute_val_out, int* flag ); __attribute__((visibility("default"))) int OMPI_C_MPI_WIN_DUP_FN( MPI_Win window, int win_keyval, void* extra_state, void* attribute_val_in, void* attribute_val_out, int* flag ); # 748 "/home/hills/seska/packages/openmpi/include/mpi.h" __attribute__((visibility("default"))) extern struct ompi_predefined_communicator_t ompi_mpi_comm_world; __attribute__((visibility("default"))) extern struct ompi_predefined_communicator_t ompi_mpi_comm_self; __attribute__((visibility("default"))) extern struct ompi_predefined_communicator_t ompi_mpi_comm_null; __attribute__((visibility("default"))) extern struct ompi_predefined_group_t ompi_mpi_group_empty; __attribute__((visibility("default"))) extern struct ompi_predefined_group_t ompi_mpi_group_null; __attribute__((visibility("default"))) extern struct ompi_predefined_request_t ompi_request_null; __attribute__((visibility("default"))) extern struct ompi_predefined_op_t ompi_mpi_op_null; __attribute__((visibility("default"))) extern struct ompi_predefined_op_t ompi_mpi_op_min; __attribute__((visibility("default"))) extern struct ompi_predefined_op_t ompi_mpi_op_max; __attribute__((visibility("default"))) extern struct ompi_predefined_op_t ompi_mpi_op_sum; __attribute__((visibility("default"))) extern struct ompi_predefined_op_t ompi_mpi_op_prod; __attribute__((visibility("default"))) extern struct ompi_predefined_op_t ompi_mpi_op_land; __attribute__((visibility("default"))) extern struct ompi_predefined_op_t ompi_mpi_op_band; __attribute__((visibility("default"))) extern struct ompi_predefined_op_t ompi_mpi_op_lor; __attribute__((visibility("default"))) extern struct ompi_predefined_op_t ompi_mpi_op_bor; __attribute__((visibility("default"))) extern struct ompi_predefined_op_t ompi_mpi_op_lxor; __attribute__((visibility("default"))) extern struct ompi_predefined_op_t ompi_mpi_op_bxor; __attribute__((visibility("default"))) extern struct ompi_predefined_op_t ompi_mpi_op_maxloc; __attribute__((visibility("default"))) extern struct ompi_predefined_op_t ompi_mpi_op_minloc; __attribute__((visibility("default"))) extern struct ompi_predefined_op_t ompi_mpi_op_replace; __attribute__((visibility("default"))) extern struct ompi_predefined_datatype_t ompi_mpi_datatype_null; __attribute__((visibility("default"))) extern struct ompi_predefined_datatype_t ompi_mpi_lb ; __attribute__((visibility("default"))) extern struct ompi_predefined_datatype_t ompi_mpi_ub ; __attribute__((visibility("default"))) extern struct ompi_predefined_datatype_t ompi_mpi_char; __attribute__((visibility("default"))) extern struct ompi_predefined_datatype_t ompi_mpi_signed_char; __attribute__((visibility("default"))) extern struct ompi_predefined_datatype_t ompi_mpi_unsigned_char; __attribute__((visibility("default"))) extern struct ompi_predefined_datatype_t ompi_mpi_byte; __attribute__((visibility("default"))) extern struct ompi_predefined_datatype_t ompi_mpi_short; __attribute__((visibility("default"))) extern struct ompi_predefined_datatype_t ompi_mpi_unsigned_short; __attribute__((visibility("default"))) extern struct ompi_predefined_datatype_t ompi_mpi_int; __attribute__((visibility("default"))) extern struct ompi_predefined_datatype_t ompi_mpi_unsigned; __attribute__((visibility("default"))) extern struct ompi_predefined_datatype_t ompi_mpi_long; __attribute__((visibility("default"))) extern struct ompi_predefined_datatype_t ompi_mpi_unsigned_long; __attribute__((visibility("default"))) extern struct ompi_predefined_datatype_t ompi_mpi_long_long_int; __attribute__((visibility("default"))) extern struct ompi_predefined_datatype_t ompi_mpi_unsigned_long_long; __attribute__((visibility("default"))) extern struct ompi_predefined_datatype_t ompi_mpi_float; __attribute__((visibility("default"))) extern struct ompi_predefined_datatype_t ompi_mpi_double; __attribute__((visibility("default"))) extern struct ompi_predefined_datatype_t ompi_mpi_long_double; __attribute__((visibility("default"))) extern struct ompi_predefined_datatype_t ompi_mpi_wchar; __attribute__((visibility("default"))) extern struct ompi_predefined_datatype_t ompi_mpi_packed; __attribute__((visibility("default"))) extern struct ompi_predefined_datatype_t ompi_mpi_cxx_bool; __attribute__((visibility("default"))) extern struct ompi_predefined_datatype_t ompi_mpi_cxx_cplex; __attribute__((visibility("default"))) extern struct ompi_predefined_datatype_t ompi_mpi_cxx_dblcplex; __attribute__((visibility("default"))) extern struct ompi_predefined_datatype_t ompi_mpi_cxx_ldblcplex; __attribute__((visibility("default"))) extern struct ompi_predefined_datatype_t ompi_mpi_logical; __attribute__((visibility("default"))) extern struct ompi_predefined_datatype_t ompi_mpi_character; __attribute__((visibility("default"))) extern struct ompi_predefined_datatype_t ompi_mpi_integer; __attribute__((visibility("default"))) extern struct ompi_predefined_datatype_t ompi_mpi_real; __attribute__((visibility("default"))) extern struct ompi_predefined_datatype_t ompi_mpi_dblprec; __attribute__((visibility("default"))) extern struct ompi_predefined_datatype_t ompi_mpi_cplex; __attribute__((visibility("default"))) extern struct ompi_predefined_datatype_t ompi_mpi_dblcplex; __attribute__((visibility("default"))) extern struct ompi_predefined_datatype_t ompi_mpi_ldblcplex; __attribute__((visibility("default"))) extern struct ompi_predefined_datatype_t ompi_mpi_2int; __attribute__((visibility("default"))) extern struct ompi_predefined_datatype_t ompi_mpi_2integer; __attribute__((visibility("default"))) extern struct ompi_predefined_datatype_t ompi_mpi_2real; __attribute__((visibility("default"))) extern struct ompi_predefined_datatype_t ompi_mpi_2dblprec; __attribute__((visibility("default"))) extern struct ompi_predefined_datatype_t ompi_mpi_2cplex; __attribute__((visibility("default"))) extern struct ompi_predefined_datatype_t ompi_mpi_2dblcplex; __attribute__((visibility("default"))) extern struct ompi_predefined_datatype_t ompi_mpi_float_int; __attribute__((visibility("default"))) extern struct ompi_predefined_datatype_t ompi_mpi_double_int; __attribute__((visibility("default"))) extern struct ompi_predefined_datatype_t ompi_mpi_longdbl_int; __attribute__((visibility("default"))) extern struct ompi_predefined_datatype_t ompi_mpi_short_int; __attribute__((visibility("default"))) extern struct ompi_predefined_datatype_t ompi_mpi_long_int; __attribute__((visibility("default"))) extern struct ompi_predefined_datatype_t ompi_mpi_logical1; __attribute__((visibility("default"))) extern struct ompi_predefined_datatype_t ompi_mpi_logical2; __attribute__((visibility("default"))) extern struct ompi_predefined_datatype_t ompi_mpi_logical4; __attribute__((visibility("default"))) extern struct ompi_predefined_datatype_t ompi_mpi_logical8; __attribute__((visibility("default"))) extern struct ompi_predefined_datatype_t ompi_mpi_integer1; __attribute__((visibility("default"))) extern struct ompi_predefined_datatype_t ompi_mpi_integer2; __attribute__((visibility("default"))) extern struct ompi_predefined_datatype_t ompi_mpi_integer4; __attribute__((visibility("default"))) extern struct ompi_predefined_datatype_t ompi_mpi_integer8; __attribute__((visibility("default"))) extern struct ompi_predefined_datatype_t ompi_mpi_integer16; __attribute__((visibility("default"))) extern struct ompi_predefined_datatype_t ompi_mpi_real2; __attribute__((visibility("default"))) extern struct ompi_predefined_datatype_t ompi_mpi_real4; __attribute__((visibility("default"))) extern struct ompi_predefined_datatype_t ompi_mpi_real8; __attribute__((visibility("default"))) extern struct ompi_predefined_datatype_t ompi_mpi_real16; __attribute__((visibility("default"))) extern struct ompi_predefined_datatype_t ompi_mpi_complex8; __attribute__((visibility("default"))) extern struct ompi_predefined_datatype_t ompi_mpi_complex16; __attribute__((visibility("default"))) extern struct ompi_predefined_datatype_t ompi_mpi_complex32; __attribute__((visibility("default"))) extern struct ompi_predefined_datatype_t ompi_mpi_int8_t; __attribute__((visibility("default"))) extern struct ompi_predefined_datatype_t ompi_mpi_uint8_t; __attribute__((visibility("default"))) extern struct ompi_predefined_datatype_t ompi_mpi_int16_t; __attribute__((visibility("default"))) extern struct ompi_predefined_datatype_t ompi_mpi_uint16_t; __attribute__((visibility("default"))) extern struct ompi_predefined_datatype_t ompi_mpi_int32_t; __attribute__((visibility("default"))) extern struct ompi_predefined_datatype_t ompi_mpi_uint32_t; __attribute__((visibility("default"))) extern struct ompi_predefined_datatype_t ompi_mpi_int64_t; __attribute__((visibility("default"))) extern struct ompi_predefined_datatype_t ompi_mpi_uint64_t; __attribute__((visibility("default"))) extern struct ompi_predefined_datatype_t ompi_mpi_aint; __attribute__((visibility("default"))) extern struct ompi_predefined_datatype_t ompi_mpi_offset; __attribute__((visibility("default"))) extern struct ompi_predefined_datatype_t ompi_mpi_c_bool; __attribute__((visibility("default"))) extern struct ompi_predefined_datatype_t ompi_mpi_c_complex; __attribute__((visibility("default"))) extern struct ompi_predefined_datatype_t ompi_mpi_c_float_complex; __attribute__((visibility("default"))) extern struct ompi_predefined_datatype_t ompi_mpi_c_double_complex; __attribute__((visibility("default"))) extern struct ompi_predefined_datatype_t ompi_mpi_c_long_double_complex; __attribute__((visibility("default"))) extern struct ompi_predefined_errhandler_t ompi_mpi_errhandler_null; __attribute__((visibility("default"))) extern struct ompi_predefined_errhandler_t ompi_mpi_errors_are_fatal; __attribute__((visibility("default"))) extern struct ompi_predefined_errhandler_t ompi_mpi_errors_return; __attribute__((visibility("default"))) extern struct ompi_predefined_win_t ompi_mpi_win_null; __attribute__((visibility("default"))) extern struct ompi_predefined_file_t ompi_mpi_file_null; __attribute__((visibility("default"))) extern struct ompi_predefined_info_t ompi_mpi_info_null; __attribute__((visibility("default"))) extern int *MPI_F_STATUS_IGNORE; __attribute__((visibility("default"))) extern int *MPI_F_STATUSES_IGNORE; # 1024 "/home/hills/seska/packages/openmpi/include/mpi.h" __attribute__((visibility("default"))) int MPI_Abort(MPI_Comm comm, int errorcode); __attribute__((visibility("default"))) int MPI_Accumulate(void *origin_addr, int origin_count, MPI_Datatype origin_datatype, int target_rank, MPI_Aint target_disp, int target_count, MPI_Datatype target_datatype, MPI_Op op, MPI_Win win); __attribute__((visibility("default"))) int MPI_Add_error_class(int *errorclass); __attribute__((visibility("default"))) int MPI_Add_error_code(int errorclass, int *errorcode); __attribute__((visibility("default"))) int MPI_Add_error_string(int errorcode, char *string); __attribute__((visibility("default"))) int MPI_Address(void *location, MPI_Aint *address) ; __attribute__((visibility("default"))) int MPI_Allgather(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, MPI_Comm comm); __attribute__((visibility("default"))) int MPI_Allgatherv(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int *recvcounts, int *displs, MPI_Datatype recvtype, MPI_Comm comm); __attribute__((visibility("default"))) int MPI_Alloc_mem(MPI_Aint size, MPI_Info info, void *baseptr); __attribute__((visibility("default"))) int MPI_Allreduce(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm); __attribute__((visibility("default"))) int MPI_Alltoall(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, MPI_Comm comm); __attribute__((visibility("default"))) int MPI_Alltoallv(void *sendbuf, int *sendcounts, int *sdispls, MPI_Datatype sendtype, void *recvbuf, int *recvcounts, int *rdispls, MPI_Datatype recvtype, MPI_Comm comm); __attribute__((visibility("default"))) int MPI_Alltoallw(void *sendbuf, int *sendcounts, int *sdispls, MPI_Datatype *sendtypes, void *recvbuf, int *recvcounts, int *rdispls, MPI_Datatype *recvtypes, MPI_Comm comm); __attribute__((visibility("default"))) int MPI_Attr_delete(MPI_Comm comm, int keyval) ; __attribute__((visibility("default"))) int MPI_Attr_get(MPI_Comm comm, int keyval, void *attribute_val, int *flag) ; __attribute__((visibility("default"))) int MPI_Attr_put(MPI_Comm comm, int keyval, void *attribute_val) ; __attribute__((visibility("default"))) int MPI_Barrier(MPI_Comm comm); __attribute__((visibility("default"))) int MPI_Bcast(void *buffer, int count, MPI_Datatype datatype, int root, MPI_Comm comm); __attribute__((visibility("default"))) int MPI_Bsend(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm); __attribute__((visibility("default"))) int MPI_Bsend_init(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); __attribute__((visibility("default"))) int MPI_Buffer_attach(void *buffer, int size); __attribute__((visibility("default"))) int MPI_Buffer_detach(void *buffer, int *size); __attribute__((visibility("default"))) int MPI_Cancel(MPI_Request *request); __attribute__((visibility("default"))) int MPI_Cart_coords(MPI_Comm comm, int rank, int maxdims, int *coords); __attribute__((visibility("default"))) int MPI_Cart_create(MPI_Comm old_comm, int ndims, int *dims, int *periods, int reorder, MPI_Comm *comm_cart); __attribute__((visibility("default"))) int MPI_Cart_get(MPI_Comm comm, int maxdims, int *dims, int *periods, int *coords); __attribute__((visibility("default"))) int MPI_Cart_map(MPI_Comm comm, int ndims, int *dims, int *periods, int *newrank); __attribute__((visibility("default"))) int MPI_Cart_rank(MPI_Comm comm, int *coords, int *rank); __attribute__((visibility("default"))) int MPI_Cart_shift(MPI_Comm comm, int direction, int disp, int *rank_source, int *rank_dest); __attribute__((visibility("default"))) int MPI_Cart_sub(MPI_Comm comm, int *remain_dims, MPI_Comm *new_comm); __attribute__((visibility("default"))) int MPI_Cartdim_get(MPI_Comm comm, int *ndims); __attribute__((visibility("default"))) int MPI_Close_port(char *port_name); __attribute__((visibility("default"))) int MPI_Comm_accept(char *port_name, MPI_Info info, int root, MPI_Comm comm, MPI_Comm *newcomm); __attribute__((visibility("default"))) int MPI_Comm_c2f(MPI_Comm comm); __attribute__((visibility("default"))) int MPI_Comm_call_errhandler(MPI_Comm comm, int errorcode); __attribute__((visibility("default"))) int MPI_Comm_compare(MPI_Comm comm1, MPI_Comm comm2, int *result); __attribute__((visibility("default"))) int MPI_Comm_connect(char *port_name, MPI_Info info, int root, MPI_Comm comm, MPI_Comm *newcomm); __attribute__((visibility("default"))) int MPI_Comm_create_errhandler(MPI_Comm_errhandler_function *function, MPI_Errhandler *errhandler); __attribute__((visibility("default"))) int MPI_Comm_create_keyval(MPI_Comm_copy_attr_function *comm_copy_attr_fn, MPI_Comm_delete_attr_function *comm_delete_attr_fn, int *comm_keyval, void *extra_state); __attribute__((visibility("default"))) int MPI_Comm_create(MPI_Comm comm, MPI_Group group, MPI_Comm *newcomm); __attribute__((visibility("default"))) int MPI_Comm_delete_attr(MPI_Comm comm, int comm_keyval); __attribute__((visibility("default"))) int MPI_Comm_disconnect(MPI_Comm *comm); __attribute__((visibility("default"))) int MPI_Comm_dup(MPI_Comm comm, MPI_Comm *newcomm); __attribute__((visibility("default"))) MPI_Comm MPI_Comm_f2c(int comm); __attribute__((visibility("default"))) int MPI_Comm_free_keyval(int *comm_keyval); __attribute__((visibility("default"))) int MPI_Comm_free(MPI_Comm *comm); __attribute__((visibility("default"))) int MPI_Comm_get_attr(MPI_Comm comm, int comm_keyval, void *attribute_val, int *flag); __attribute__((visibility("default"))) int MPI_Comm_get_errhandler(MPI_Comm comm, MPI_Errhandler *erhandler); __attribute__((visibility("default"))) int MPI_Comm_get_name(MPI_Comm comm, char *comm_name, int *resultlen); __attribute__((visibility("default"))) int MPI_Comm_get_parent(MPI_Comm *parent); __attribute__((visibility("default"))) int MPI_Comm_group(MPI_Comm comm, MPI_Group *group); __attribute__((visibility("default"))) int MPI_Comm_join(int fd, MPI_Comm *intercomm); __attribute__((visibility("default"))) int MPI_Comm_rank(MPI_Comm comm, int *rank); __attribute__((visibility("default"))) int MPI_Comm_remote_group(MPI_Comm comm, MPI_Group *group); __attribute__((visibility("default"))) int MPI_Comm_remote_size(MPI_Comm comm, int *size); __attribute__((visibility("default"))) int MPI_Comm_set_attr(MPI_Comm comm, int comm_keyval, void *attribute_val); __attribute__((visibility("default"))) int MPI_Comm_set_errhandler(MPI_Comm comm, MPI_Errhandler errhandler); __attribute__((visibility("default"))) int MPI_Comm_set_name(MPI_Comm comm, char *comm_name); __attribute__((visibility("default"))) int MPI_Comm_size(MPI_Comm comm, int *size); __attribute__((visibility("default"))) int MPI_Comm_spawn(char *command, char **argv, int maxprocs, MPI_Info info, int root, MPI_Comm comm, MPI_Comm *intercomm, int *array_of_errcodes); __attribute__((visibility("default"))) int MPI_Comm_spawn_multiple(int count, char **array_of_commands, char ***array_of_argv, int *array_of_maxprocs, MPI_Info *array_of_info, int root, MPI_Comm comm, MPI_Comm *intercomm, int *array_of_errcodes); __attribute__((visibility("default"))) int MPI_Comm_split(MPI_Comm comm, int color, int key, MPI_Comm *newcomm); __attribute__((visibility("default"))) int MPI_Comm_test_inter(MPI_Comm comm, int *flag); __attribute__((visibility("default"))) int MPI_Dims_create(int nnodes, int ndims, int *dims); __attribute__((visibility("default"))) int MPI_Errhandler_c2f(MPI_Errhandler errhandler); __attribute__((visibility("default"))) int MPI_Errhandler_create(MPI_Handler_function *function, MPI_Errhandler *errhandler) ; __attribute__((visibility("default"))) MPI_Errhandler MPI_Errhandler_f2c(int errhandler); __attribute__((visibility("default"))) int MPI_Errhandler_free(MPI_Errhandler *errhandler); __attribute__((visibility("default"))) int MPI_Errhandler_get(MPI_Comm comm, MPI_Errhandler *errhandler) ; __attribute__((visibility("default"))) int MPI_Errhandler_set(MPI_Comm comm, MPI_Errhandler errhandler) ; __attribute__((visibility("default"))) int MPI_Error_class(int errorcode, int *errorclass); __attribute__((visibility("default"))) int MPI_Error_string(int errorcode, char *string, int *resultlen); __attribute__((visibility("default"))) int MPI_Exscan(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm); __attribute__((visibility("default"))) int MPI_File_c2f(MPI_File file); __attribute__((visibility("default"))) MPI_File MPI_File_f2c(int file); __attribute__((visibility("default"))) int MPI_File_call_errhandler(MPI_File fh, int errorcode); __attribute__((visibility("default"))) int MPI_File_create_errhandler(MPI_File_errhandler_function *function, MPI_Errhandler *errhandler); __attribute__((visibility("default"))) int MPI_File_set_errhandler( MPI_File file, MPI_Errhandler errhandler); __attribute__((visibility("default"))) int MPI_File_get_errhandler( MPI_File file, MPI_Errhandler *errhandler); __attribute__((visibility("default"))) int MPI_File_open(MPI_Comm comm, char *filename, int amode, MPI_Info info, MPI_File *fh); __attribute__((visibility("default"))) int MPI_File_close(MPI_File *fh); __attribute__((visibility("default"))) int MPI_File_delete(char *filename, MPI_Info info); __attribute__((visibility("default"))) int MPI_File_set_size(MPI_File fh, MPI_Offset size); __attribute__((visibility("default"))) int MPI_File_preallocate(MPI_File fh, MPI_Offset size); __attribute__((visibility("default"))) int MPI_File_get_size(MPI_File fh, MPI_Offset *size); __attribute__((visibility("default"))) int MPI_File_get_group(MPI_File fh, MPI_Group *group); __attribute__((visibility("default"))) int MPI_File_get_amode(MPI_File fh, int *amode); __attribute__((visibility("default"))) int MPI_File_set_info(MPI_File fh, MPI_Info info); __attribute__((visibility("default"))) int MPI_File_get_info(MPI_File fh, MPI_Info *info_used); __attribute__((visibility("default"))) int MPI_File_set_view(MPI_File fh, MPI_Offset disp, MPI_Datatype etype, MPI_Datatype filetype, char *datarep, MPI_Info info); __attribute__((visibility("default"))) int MPI_File_get_view(MPI_File fh, MPI_Offset *disp, MPI_Datatype *etype, MPI_Datatype *filetype, char *datarep); __attribute__((visibility("default"))) int MPI_File_read_at(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); __attribute__((visibility("default"))) int MPI_File_read_at_all(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); __attribute__((visibility("default"))) int MPI_File_write_at(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); __attribute__((visibility("default"))) int MPI_File_write_at_all(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); __attribute__((visibility("default"))) int MPI_File_iread_at(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype, MPI_Request *request); __attribute__((visibility("default"))) int MPI_File_iwrite_at(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype, MPI_Request *request); __attribute__((visibility("default"))) int MPI_File_read(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); __attribute__((visibility("default"))) int MPI_File_read_all(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); __attribute__((visibility("default"))) int MPI_File_write(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); __attribute__((visibility("default"))) int MPI_File_write_all(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); __attribute__((visibility("default"))) int MPI_File_iread(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Request *request); __attribute__((visibility("default"))) int MPI_File_iwrite(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Request *request); __attribute__((visibility("default"))) int MPI_File_seek(MPI_File fh, MPI_Offset offset, int whence); __attribute__((visibility("default"))) int MPI_File_get_position(MPI_File fh, MPI_Offset *offset); __attribute__((visibility("default"))) int MPI_File_get_byte_offset(MPI_File fh, MPI_Offset offset, MPI_Offset *disp); __attribute__((visibility("default"))) int MPI_File_read_shared(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); __attribute__((visibility("default"))) int MPI_File_write_shared(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); __attribute__((visibility("default"))) int MPI_File_iread_shared(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Request *request); __attribute__((visibility("default"))) int MPI_File_iwrite_shared(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Request *request); __attribute__((visibility("default"))) int MPI_File_read_ordered(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); __attribute__((visibility("default"))) int MPI_File_write_ordered(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); __attribute__((visibility("default"))) int MPI_File_seek_shared(MPI_File fh, MPI_Offset offset, int whence); __attribute__((visibility("default"))) int MPI_File_get_position_shared(MPI_File fh, MPI_Offset *offset); __attribute__((visibility("default"))) int MPI_File_read_at_all_begin(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype); __attribute__((visibility("default"))) int MPI_File_read_at_all_end(MPI_File fh, void *buf, MPI_Status *status); __attribute__((visibility("default"))) int MPI_File_write_at_all_begin(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype); __attribute__((visibility("default"))) int MPI_File_write_at_all_end(MPI_File fh, void *buf, MPI_Status *status); __attribute__((visibility("default"))) int MPI_File_read_all_begin(MPI_File fh, void *buf, int count, MPI_Datatype datatype); __attribute__((visibility("default"))) int MPI_File_read_all_end(MPI_File fh, void *buf, MPI_Status *status); __attribute__((visibility("default"))) int MPI_File_write_all_begin(MPI_File fh, void *buf, int count, MPI_Datatype datatype); __attribute__((visibility("default"))) int MPI_File_write_all_end(MPI_File fh, void *buf, MPI_Status *status); __attribute__((visibility("default"))) int MPI_File_read_ordered_begin(MPI_File fh, void *buf, int count, MPI_Datatype datatype); __attribute__((visibility("default"))) int MPI_File_read_ordered_end(MPI_File fh, void *buf, MPI_Status *status); __attribute__((visibility("default"))) int MPI_File_write_ordered_begin(MPI_File fh, void *buf, int count, MPI_Datatype datatype); __attribute__((visibility("default"))) int MPI_File_write_ordered_end(MPI_File fh, void *buf, MPI_Status *status); __attribute__((visibility("default"))) int MPI_File_get_type_extent(MPI_File fh, MPI_Datatype datatype, MPI_Aint *extent); __attribute__((visibility("default"))) int MPI_File_set_atomicity(MPI_File fh, int flag); __attribute__((visibility("default"))) int MPI_File_get_atomicity(MPI_File fh, int *flag); __attribute__((visibility("default"))) int MPI_File_sync(MPI_File fh); __attribute__((visibility("default"))) int MPI_Finalize(void); __attribute__((visibility("default"))) int MPI_Finalized(int *flag); __attribute__((visibility("default"))) int MPI_Free_mem(void *base); __attribute__((visibility("default"))) int MPI_Gather(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, int root, MPI_Comm comm); __attribute__((visibility("default"))) int MPI_Gatherv(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int *recvcounts, int *displs, MPI_Datatype recvtype, int root, MPI_Comm comm); __attribute__((visibility("default"))) int MPI_Get_address(void *location, MPI_Aint *address); __attribute__((visibility("default"))) int MPI_Get_count(MPI_Status *status, MPI_Datatype datatype, int *count); __attribute__((visibility("default"))) int MPI_Get_elements(MPI_Status *status, MPI_Datatype datatype, int *count); __attribute__((visibility("default"))) int MPI_Get(void *origin_addr, int origin_count, MPI_Datatype origin_datatype, int target_rank, MPI_Aint target_disp, int target_count, MPI_Datatype target_datatype, MPI_Win win); __attribute__((visibility("default"))) int MPI_Get_processor_name(char *name, int *resultlen); __attribute__((visibility("default"))) int MPI_Get_version(int *version, int *subversion); __attribute__((visibility("default"))) int MPI_Graph_create(MPI_Comm comm_old, int nnodes, int *index, int *edges, int reorder, MPI_Comm *comm_graph); __attribute__((visibility("default"))) int MPI_Graph_get(MPI_Comm comm, int maxindex, int maxedges, int *index, int *edges); __attribute__((visibility("default"))) int MPI_Graph_map(MPI_Comm comm, int nnodes, int *index, int *edges, int *newrank); __attribute__((visibility("default"))) int MPI_Graph_neighbors_count(MPI_Comm comm, int rank, int *nneighbors); __attribute__((visibility("default"))) int MPI_Graph_neighbors(MPI_Comm comm, int rank, int maxneighbors, int *neighbors); __attribute__((visibility("default"))) int MPI_Graphdims_get(MPI_Comm comm, int *nnodes, int *nedges); __attribute__((visibility("default"))) int MPI_Grequest_complete(MPI_Request request); __attribute__((visibility("default"))) int MPI_Grequest_start(MPI_Grequest_query_function *query_fn, MPI_Grequest_free_function *free_fn, MPI_Grequest_cancel_function *cancel_fn, void *extra_state, MPI_Request *request); __attribute__((visibility("default"))) int MPI_Group_c2f(MPI_Group group); __attribute__((visibility("default"))) int MPI_Group_compare(MPI_Group group1, MPI_Group group2, int *result); __attribute__((visibility("default"))) int MPI_Group_difference(MPI_Group group1, MPI_Group group2, MPI_Group *newgroup); __attribute__((visibility("default"))) int MPI_Group_excl(MPI_Group group, int n, int *ranks, MPI_Group *newgroup); __attribute__((visibility("default"))) MPI_Group MPI_Group_f2c(int group); __attribute__((visibility("default"))) int MPI_Group_free(MPI_Group *group); __attribute__((visibility("default"))) int MPI_Group_incl(MPI_Group group, int n, int *ranks, MPI_Group *newgroup); __attribute__((visibility("default"))) int MPI_Group_intersection(MPI_Group group1, MPI_Group group2, MPI_Group *newgroup); __attribute__((visibility("default"))) int MPI_Group_range_excl(MPI_Group group, int n, int ranges[][3], MPI_Group *newgroup); __attribute__((visibility("default"))) int MPI_Group_range_incl(MPI_Group group, int n, int ranges[][3], MPI_Group *newgroup); __attribute__((visibility("default"))) int MPI_Group_rank(MPI_Group group, int *rank); __attribute__((visibility("default"))) int MPI_Group_size(MPI_Group group, int *size); __attribute__((visibility("default"))) int MPI_Group_translate_ranks(MPI_Group group1, int n, int *ranks1, MPI_Group group2, int *ranks2); __attribute__((visibility("default"))) int MPI_Group_union(MPI_Group group1, MPI_Group group2, MPI_Group *newgroup); __attribute__((visibility("default"))) int MPI_Ibsend(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); __attribute__((visibility("default"))) int MPI_Info_c2f(MPI_Info info); __attribute__((visibility("default"))) int MPI_Info_create(MPI_Info *info); __attribute__((visibility("default"))) int MPI_Info_delete(MPI_Info info, char *key); __attribute__((visibility("default"))) int MPI_Info_dup(MPI_Info info, MPI_Info *newinfo); __attribute__((visibility("default"))) MPI_Info MPI_Info_f2c(int info); __attribute__((visibility("default"))) int MPI_Info_free(MPI_Info *info); __attribute__((visibility("default"))) int MPI_Info_get(MPI_Info info, char *key, int valuelen, char *value, int *flag); __attribute__((visibility("default"))) int MPI_Info_get_nkeys(MPI_Info info, int *nkeys); __attribute__((visibility("default"))) int MPI_Info_get_nthkey(MPI_Info info, int n, char *key); __attribute__((visibility("default"))) int MPI_Info_get_valuelen(MPI_Info info, char *key, int *valuelen, int *flag); __attribute__((visibility("default"))) int MPI_Info_set(MPI_Info info, char *key, char *value); __attribute__((visibility("default"))) int MPI_Init(int *argc, char ***argv); __attribute__((visibility("default"))) int MPI_Initialized(int *flag); __attribute__((visibility("default"))) int MPI_Init_thread(int *argc, char ***argv, int required, int *provided); __attribute__((visibility("default"))) int MPI_Intercomm_create(MPI_Comm local_comm, int local_leader, MPI_Comm bridge_comm, int remote_leader, int tag, MPI_Comm *newintercomm); __attribute__((visibility("default"))) int MPI_Intercomm_merge(MPI_Comm intercomm, int high, MPI_Comm *newintercomm); __attribute__((visibility("default"))) int MPI_Iprobe(int source, int tag, MPI_Comm comm, int *flag, MPI_Status *status); __attribute__((visibility("default"))) int MPI_Irecv(void *buf, int count, MPI_Datatype datatype, int source, int tag, MPI_Comm comm, MPI_Request *request); __attribute__((visibility("default"))) int MPI_Irsend(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); __attribute__((visibility("default"))) int MPI_Isend(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); __attribute__((visibility("default"))) int MPI_Issend(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); __attribute__((visibility("default"))) int MPI_Is_thread_main(int *flag); __attribute__((visibility("default"))) int MPI_Keyval_create(MPI_Copy_function *copy_fn, MPI_Delete_function *delete_fn, int *keyval, void *extra_state) ; __attribute__((visibility("default"))) int MPI_Keyval_free(int *keyval) ; __attribute__((visibility("default"))) int MPI_Lookup_name(char *service_name, MPI_Info info, char *port_name); __attribute__((visibility("default"))) int MPI_Op_c2f(MPI_Op op); __attribute__((visibility("default"))) int MPI_Op_commutative(MPI_Op op, int *commute); __attribute__((visibility("default"))) int MPI_Op_create(MPI_User_function *function, int commute, MPI_Op *op); __attribute__((visibility("default"))) int MPI_Open_port(MPI_Info info, char *port_name); __attribute__((visibility("default"))) MPI_Op MPI_Op_f2c(int op); __attribute__((visibility("default"))) int MPI_Op_free(MPI_Op *op); __attribute__((visibility("default"))) int MPI_Pack_external(char *datarep, void *inbuf, int incount, MPI_Datatype datatype, void *outbuf, MPI_Aint outsize, MPI_Aint *position); __attribute__((visibility("default"))) int MPI_Pack_external_size(char *datarep, int incount, MPI_Datatype datatype, MPI_Aint *size); __attribute__((visibility("default"))) int MPI_Pack(void *inbuf, int incount, MPI_Datatype datatype, void *outbuf, int outsize, int *position, MPI_Comm comm); __attribute__((visibility("default"))) int MPI_Pack_size(int incount, MPI_Datatype datatype, MPI_Comm comm, int *size); __attribute__((visibility("default"))) int MPI_Pcontrol(const int level, ...); __attribute__((visibility("default"))) int MPI_Probe(int source, int tag, MPI_Comm comm, MPI_Status *status); __attribute__((visibility("default"))) int MPI_Publish_name(char *service_name, MPI_Info info, char *port_name); __attribute__((visibility("default"))) int MPI_Put(void *origin_addr, int origin_count, MPI_Datatype origin_datatype, int target_rank, MPI_Aint target_disp, int target_count, MPI_Datatype target_datatype, MPI_Win win); __attribute__((visibility("default"))) int MPI_Query_thread(int *provided); __attribute__((visibility("default"))) int MPI_Recv_init(void *buf, int count, MPI_Datatype datatype, int source, int tag, MPI_Comm comm, MPI_Request *request); __attribute__((visibility("default"))) int MPI_Recv(void *buf, int count, MPI_Datatype datatype, int source, int tag, MPI_Comm comm, MPI_Status *status); __attribute__((visibility("default"))) int MPI_Reduce(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, int root, MPI_Comm comm); __attribute__((visibility("default"))) int MPI_Reduce_local(void *inbuf, void *inoutbuf, int count, MPI_Datatype datatype, MPI_Op op); __attribute__((visibility("default"))) int MPI_Reduce_scatter(void *sendbuf, void *recvbuf, int *recvcounts, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm); __attribute__((visibility("default"))) int MPI_Register_datarep(char *datarep, MPI_Datarep_conversion_function *read_conversion_fn, MPI_Datarep_conversion_function *write_conversion_fn, MPI_Datarep_extent_function *dtype_file_extent_fn, void *extra_state); __attribute__((visibility("default"))) int MPI_Request_c2f(MPI_Request request); __attribute__((visibility("default"))) MPI_Request MPI_Request_f2c(int request); __attribute__((visibility("default"))) int MPI_Request_free(MPI_Request *request); __attribute__((visibility("default"))) int MPI_Request_get_status(MPI_Request request, int *flag, MPI_Status *status); __attribute__((visibility("default"))) int MPI_Rsend(void *ibuf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm); __attribute__((visibility("default"))) int MPI_Rsend_init(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); __attribute__((visibility("default"))) int MPI_Scan(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm); __attribute__((visibility("default"))) int MPI_Scatter(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, int root, MPI_Comm comm); __attribute__((visibility("default"))) int MPI_Scatterv(void *sendbuf, int *sendcounts, int *displs, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, int root, MPI_Comm comm); __attribute__((visibility("default"))) int MPI_Send_init(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); __attribute__((visibility("default"))) int MPI_Send(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm); __attribute__((visibility("default"))) int MPI_Sendrecv(void *sendbuf, int sendcount, MPI_Datatype sendtype, int dest, int sendtag, void *recvbuf, int recvcount, MPI_Datatype recvtype, int source, int recvtag, MPI_Comm comm, MPI_Status *status); __attribute__((visibility("default"))) int MPI_Sendrecv_replace(void * buf, int count, MPI_Datatype datatype, int dest, int sendtag, int source, int recvtag, MPI_Comm comm, MPI_Status *status); __attribute__((visibility("default"))) int MPI_Ssend_init(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); __attribute__((visibility("default"))) int MPI_Ssend(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm); __attribute__((visibility("default"))) int MPI_Start(MPI_Request *request); __attribute__((visibility("default"))) int MPI_Startall(int count, MPI_Request *array_of_requests); __attribute__((visibility("default"))) int MPI_Status_c2f(MPI_Status *c_status, int *f_status); __attribute__((visibility("default"))) int MPI_Status_f2c(int *f_status, MPI_Status *c_status); __attribute__((visibility("default"))) int MPI_Status_set_cancelled(MPI_Status *status, int flag); __attribute__((visibility("default"))) int MPI_Status_set_elements(MPI_Status *status, MPI_Datatype datatype, int count); __attribute__((visibility("default"))) int MPI_Testall(int count, MPI_Request array_of_requests[], int *flag, MPI_Status array_of_statuses[]); __attribute__((visibility("default"))) int MPI_Testany(int count, MPI_Request array_of_requests[], int *index, int *flag, MPI_Status *status); __attribute__((visibility("default"))) int MPI_Test(MPI_Request *request, int *flag, MPI_Status *status); __attribute__((visibility("default"))) int MPI_Test_cancelled(MPI_Status *status, int *flag); __attribute__((visibility("default"))) int MPI_Testsome(int incount, MPI_Request array_of_requests[], int *outcount, int array_of_indices[], MPI_Status array_of_statuses[]); __attribute__((visibility("default"))) int MPI_Topo_test(MPI_Comm comm, int *status); __attribute__((visibility("default"))) int MPI_Type_c2f(MPI_Datatype datatype); __attribute__((visibility("default"))) int MPI_Type_commit(MPI_Datatype *type); __attribute__((visibility("default"))) int MPI_Type_contiguous(int count, MPI_Datatype oldtype, MPI_Datatype *newtype); __attribute__((visibility("default"))) int MPI_Type_create_darray(int size, int rank, int ndims, int gsize_array[], int distrib_array[], int darg_array[], int psize_array[], int order, MPI_Datatype oldtype, MPI_Datatype *newtype); __attribute__((visibility("default"))) int MPI_Type_create_f90_complex(int p, int r, MPI_Datatype *newtype); __attribute__((visibility("default"))) int MPI_Type_create_f90_integer(int r, MPI_Datatype *newtype); __attribute__((visibility("default"))) int MPI_Type_create_f90_real(int p, int r, MPI_Datatype *newtype); __attribute__((visibility("default"))) int MPI_Type_create_hindexed(int count, int array_of_blocklengths[], MPI_Aint array_of_displacements[], MPI_Datatype oldtype, MPI_Datatype *newtype); __attribute__((visibility("default"))) int MPI_Type_create_hvector(int count, int blocklength, MPI_Aint stride, MPI_Datatype oldtype, MPI_Datatype *newtype); __attribute__((visibility("default"))) int MPI_Type_create_keyval(MPI_Type_copy_attr_function *type_copy_attr_fn, MPI_Type_delete_attr_function *type_delete_attr_fn, int *type_keyval, void *extra_state); __attribute__((visibility("default"))) int MPI_Type_create_indexed_block(int count, int blocklength, int array_of_displacements[], MPI_Datatype oldtype, MPI_Datatype *newtype); __attribute__((visibility("default"))) int MPI_Type_create_struct(int count, int array_of_block_lengths[], MPI_Aint array_of_displacements[], MPI_Datatype array_of_types[], MPI_Datatype *newtype); __attribute__((visibility("default"))) int MPI_Type_create_subarray(int ndims, int size_array[], int subsize_array[], int start_array[], int order, MPI_Datatype oldtype, MPI_Datatype *newtype); __attribute__((visibility("default"))) int MPI_Type_create_resized(MPI_Datatype oldtype, MPI_Aint lb, MPI_Aint extent, MPI_Datatype *newtype); __attribute__((visibility("default"))) int MPI_Type_delete_attr(MPI_Datatype type, int type_keyval); __attribute__((visibility("default"))) int MPI_Type_dup(MPI_Datatype type, MPI_Datatype *newtype); __attribute__((visibility("default"))) int MPI_Type_extent(MPI_Datatype type, MPI_Aint *extent) ; __attribute__((visibility("default"))) int MPI_Type_free(MPI_Datatype *type); __attribute__((visibility("default"))) int MPI_Type_free_keyval(int *type_keyval); __attribute__((visibility("default"))) MPI_Datatype MPI_Type_f2c(int datatype); __attribute__((visibility("default"))) int MPI_Type_get_attr(MPI_Datatype type, int type_keyval, void *attribute_val, int *flag); __attribute__((visibility("default"))) int MPI_Type_get_contents(MPI_Datatype mtype, int max_integers, int max_addresses, int max_datatypes, int array_of_integers[], MPI_Aint array_of_addresses[], MPI_Datatype array_of_datatypes[]); __attribute__((visibility("default"))) int MPI_Type_get_envelope(MPI_Datatype type, int *num_integers, int *num_addresses, int *num_datatypes, int *combiner); __attribute__((visibility("default"))) int MPI_Type_get_extent(MPI_Datatype type, MPI_Aint *lb, MPI_Aint *extent); __attribute__((visibility("default"))) int MPI_Type_get_name(MPI_Datatype type, char *type_name, int *resultlen); __attribute__((visibility("default"))) int MPI_Type_get_true_extent(MPI_Datatype datatype, MPI_Aint *true_lb, MPI_Aint *true_extent); __attribute__((visibility("default"))) int MPI_Type_hindexed(int count, int array_of_blocklengths[], MPI_Aint array_of_displacements[], MPI_Datatype oldtype, MPI_Datatype *newtype) ; __attribute__((visibility("default"))) int MPI_Type_hvector(int count, int blocklength, MPI_Aint stride, MPI_Datatype oldtype, MPI_Datatype *newtype) ; __attribute__((visibility("default"))) int MPI_Type_indexed(int count, int array_of_blocklengths[], int array_of_displacements[], MPI_Datatype oldtype, MPI_Datatype *newtype); __attribute__((visibility("default"))) int MPI_Type_lb(MPI_Datatype type, MPI_Aint *lb) ; __attribute__((visibility("default"))) int MPI_Type_match_size(int typeclass, int size, MPI_Datatype *type); __attribute__((visibility("default"))) int MPI_Type_set_attr(MPI_Datatype type, int type_keyval, void *attr_val); __attribute__((visibility("default"))) int MPI_Type_set_name(MPI_Datatype type, char *type_name); __attribute__((visibility("default"))) int MPI_Type_size(MPI_Datatype type, int *size); __attribute__((visibility("default"))) int MPI_Type_struct(int count, int array_of_blocklengths[], MPI_Aint array_of_displacements[], MPI_Datatype array_of_types[], MPI_Datatype *newtype) ; __attribute__((visibility("default"))) int MPI_Type_ub(MPI_Datatype mtype, MPI_Aint *ub) ; __attribute__((visibility("default"))) int MPI_Type_vector(int count, int blocklength, int stride, MPI_Datatype oldtype, MPI_Datatype *newtype); __attribute__((visibility("default"))) int MPI_Unpack(void *inbuf, int insize, int *position, void *outbuf, int outcount, MPI_Datatype datatype, MPI_Comm comm); __attribute__((visibility("default"))) int MPI_Unpublish_name(char *service_name, MPI_Info info, char *port_name); __attribute__((visibility("default"))) int MPI_Unpack_external (char *datarep, void *inbuf, MPI_Aint insize, MPI_Aint *position, void *outbuf, int outcount, MPI_Datatype datatype); __attribute__((visibility("default"))) int MPI_Waitall(int count, MPI_Request *array_of_requests, MPI_Status *array_of_statuses); __attribute__((visibility("default"))) int MPI_Waitany(int count, MPI_Request *array_of_requests, int *index, MPI_Status *status); __attribute__((visibility("default"))) int MPI_Wait(MPI_Request *request, MPI_Status *status); __attribute__((visibility("default"))) int MPI_Waitsome(int incount, MPI_Request *array_of_requests, int *outcount, int *array_of_indices, MPI_Status *array_of_statuses); __attribute__((visibility("default"))) int MPI_Win_c2f(MPI_Win win); __attribute__((visibility("default"))) int MPI_Win_call_errhandler(MPI_Win win, int errorcode); __attribute__((visibility("default"))) int MPI_Win_complete(MPI_Win win); __attribute__((visibility("default"))) int MPI_Win_create(void *base, MPI_Aint size, int disp_unit, MPI_Info info, MPI_Comm comm, MPI_Win *win); __attribute__((visibility("default"))) int MPI_Win_create_errhandler(MPI_Win_errhandler_function *function, MPI_Errhandler *errhandler); __attribute__((visibility("default"))) int MPI_Win_create_keyval(MPI_Win_copy_attr_function *win_copy_attr_fn, MPI_Win_delete_attr_function *win_delete_attr_fn, int *win_keyval, void *extra_state); __attribute__((visibility("default"))) int MPI_Win_delete_attr(MPI_Win win, int win_keyval); __attribute__((visibility("default"))) MPI_Win MPI_Win_f2c(int win); __attribute__((visibility("default"))) int MPI_Win_fence(int assert, MPI_Win win); __attribute__((visibility("default"))) int MPI_Win_free(MPI_Win *win); __attribute__((visibility("default"))) int MPI_Win_free_keyval(int *win_keyval); __attribute__((visibility("default"))) int MPI_Win_get_attr(MPI_Win win, int win_keyval, void *attribute_val, int *flag); __attribute__((visibility("default"))) int MPI_Win_get_errhandler(MPI_Win win, MPI_Errhandler *errhandler); __attribute__((visibility("default"))) int MPI_Win_get_group(MPI_Win win, MPI_Group *group); __attribute__((visibility("default"))) int MPI_Win_get_name(MPI_Win win, char *win_name, int *resultlen); __attribute__((visibility("default"))) int MPI_Win_lock(int lock_type, int rank, int assert, MPI_Win win); __attribute__((visibility("default"))) int MPI_Win_post(MPI_Group group, int assert, MPI_Win win); __attribute__((visibility("default"))) int MPI_Win_set_attr(MPI_Win win, int win_keyval, void *attribute_val); __attribute__((visibility("default"))) int MPI_Win_set_errhandler(MPI_Win win, MPI_Errhandler errhandler); __attribute__((visibility("default"))) int MPI_Win_set_name(MPI_Win win, char *win_name); __attribute__((visibility("default"))) int MPI_Win_start(MPI_Group group, int assert, MPI_Win win); __attribute__((visibility("default"))) int MPI_Win_test(MPI_Win win, int *flag); __attribute__((visibility("default"))) int MPI_Win_unlock(int rank, MPI_Win win); __attribute__((visibility("default"))) int MPI_Win_wait(MPI_Win win); __attribute__((visibility("default"))) double MPI_Wtick(void); __attribute__((visibility("default"))) double MPI_Wtime(void); __attribute__((visibility("default"))) int PMPI_Abort(MPI_Comm comm, int errorcode); __attribute__((visibility("default"))) int PMPI_Accumulate(void *origin_addr, int origin_count, MPI_Datatype origin_datatype, int target_rank, MPI_Aint target_disp, int target_count, MPI_Datatype target_datatype, MPI_Op op, MPI_Win win); __attribute__((visibility("default"))) int PMPI_Add_error_class(int *errorclass); __attribute__((visibility("default"))) int PMPI_Add_error_code(int errorclass, int *errorcode); __attribute__((visibility("default"))) int PMPI_Add_error_string(int errorcode, char *string); __attribute__((visibility("default"))) int PMPI_Address(void *location, MPI_Aint *address) ; __attribute__((visibility("default"))) int PMPI_Allgather(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, MPI_Comm comm); __attribute__((visibility("default"))) int PMPI_Allgatherv(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int *recvcounts, int *displs, MPI_Datatype recvtype, MPI_Comm comm); __attribute__((visibility("default"))) int PMPI_Alloc_mem(MPI_Aint size, MPI_Info info, void *baseptr); __attribute__((visibility("default"))) int PMPI_Allreduce(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm); __attribute__((visibility("default"))) int PMPI_Alltoall(void *sendbuf, int sendcount, MPI_Datatype sendtype, void *recvbuf, int recvcount, MPI_Datatype recvtype, MPI_Comm comm); __attribute__((visibility("default"))) int PMPI_Alltoallv(void *sendbuf, int *sendcounts, int *sdispls, MPI_Datatype sendtype, void *recvbuf, int *recvcounts, int *rdispls, MPI_Datatype recvtype, MPI_Comm comm); __attribute__((visibility("default"))) int PMPI_Alltoallw(void *sendbuf, int *sendcounts, int *sdispls, MPI_Datatype *sendtypes, void *recvbuf, int *recvcounts, int *rdispls, MPI_Datatype *recvtypes, MPI_Comm comm); __attribute__((visibility("default"))) int PMPI_Attr_delete(MPI_Comm comm, int keyval) ; __attribute__((visibility("default"))) int PMPI_Attr_get(MPI_Comm comm, int keyval, void *attribute_val, int *flag) ; __attribute__((visibility("default"))) int PMPI_Attr_put(MPI_Comm comm, int keyval, void *attribute_val) ; __attribute__((visibility("default"))) int PMPI_Barrier(MPI_Comm comm); __attribute__((visibility("default"))) int PMPI_Bcast(void *buffer, int count, MPI_Datatype datatype, int root, MPI_Comm comm); __attribute__((visibility("default"))) int PMPI_Bsend(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm); __attribute__((visibility("default"))) int PMPI_Bsend_init(void *buf, int count, MPI_Datatype datatype, int dest, int tag, MPI_Comm comm, MPI_Request *request); __attribute__((visibility("default"))) int PMPI_Buffer_attach(void *buffer, int size); __attribute__((visibility("default"))) int PMPI_Buffer_detach(void *buffer, int *size); __attribute__((visibility("default"))) int PMPI_Cancel(MPI_Request *request); __attribute__((visibility("default"))) int PMPI_Cart_coords(MPI_Comm comm, int rank, int maxdims, int *coords); __attribute__((visibility("default"))) int PMPI_Cart_create(MPI_Comm old_comm, int ndims, int *dims, int *periods, int reorder, MPI_Comm *comm_cart); __attribute__((visibility("default"))) int PMPI_Cart_get(MPI_Comm comm, int maxdims, int *dims, int *periods, int *coords); __attribute__((visibility("default"))) int PMPI_Cart_map(MPI_Comm comm, int ndims, int *dims, int *periods, int *newrank); __attribute__((visibility("default"))) int PMPI_Cart_rank(MPI_Comm comm, int *coords, int *rank); __attribute__((visibility("default"))) int PMPI_Cart_shift(MPI_Comm comm, int direction, int disp, int *rank_source, int *rank_dest); __attribute__((visibility("default"))) int PMPI_Cart_sub(MPI_Comm comm, int *remain_dims, MPI_Comm *new_comm); __attribute__((visibility("default"))) int PMPI_Cartdim_get(MPI_Comm comm, int *ndims); __attribute__((visibility("default"))) int PMPI_Close_port(char *port_name); __attribute__((visibility("default"))) int PMPI_Comm_accept(char *port_name, MPI_Info info, int root, MPI_Comm comm, MPI_Comm *newcomm); __attribute__((visibility("default"))) int PMPI_Comm_c2f(MPI_Comm comm); __attribute__((visibility("default"))) int PMPI_Comm_call_errhandler(MPI_Comm comm, int errorcode); __attribute__((visibility("default"))) int PMPI_Comm_compare(MPI_Comm comm1, MPI_Comm comm2, int *result); __attribute__((visibility("default"))) int PMPI_Comm_connect(char *port_name, MPI_Info info, int root, MPI_Comm comm, MPI_Comm *newcomm); __attribute__((visibility("default"))) int PMPI_Comm_create_errhandler(MPI_Comm_errhandler_function *function, MPI_Errhandler *errhandler); __attribute__((visibility("default"))) int PMPI_Comm_create_keyval(MPI_Comm_copy_attr_function *comm_copy_attr_fn, MPI_Comm_delete_attr_function *comm_delete_attr_fn, int *comm_keyval, void *extra_state); __attribute__((visibility("default"))) int PMPI_Comm_create(MPI_Comm comm, MPI_Group group, MPI_Comm *newcomm); __attribute__((visibility("default"))) int PMPI_Comm_delete_attr(MPI_Comm comm, int comm_keyval); __attribute__((visibility("default"))) int PMPI_Comm_disconnect(MPI_Comm *comm); __attribute__((visibility("default"))) int PMPI_Comm_dup(MPI_Comm comm, MPI_Comm *newcomm); __attribute__((visibility("default"))) MPI_Comm PMPI_Comm_f2c(int comm); __attribute__((visibility("default"))) int PMPI_Comm_free_keyval(int *comm_keyval); __attribute__((visibility("default"))) int PMPI_Comm_free(MPI_Comm *comm); __attribute__((visibility("default"))) int PMPI_Comm_get_attr(MPI_Comm comm, int comm_keyval, void *attribute_val, int *flag); __attribute__((visibility("default"))) int PMPI_Comm_get_errhandler(MPI_Comm comm, MPI_Errhandler *erhandler); __attribute__((visibility("default"))) int PMPI_Comm_get_name(MPI_Comm comm, char *comm_name, int *resultlen); __attribute__((visibility("default"))) int PMPI_Comm_get_parent(MPI_Comm *parent); __attribute__((visibility("default"))) int PMPI_Comm_group(MPI_Comm comm, MPI_Group *group); __attribute__((visibility("default"))) int PMPI_Comm_join(int fd, MPI_Comm *intercomm); __attribute__((visibility("default"))) int PMPI_Comm_rank(MPI_Comm comm, int *rank); __attribute__((visibility("default"))) int PMPI_Comm_remote_group(MPI_Comm comm, MPI_Group *group); __attribute__((visibility("default"))) int PMPI_Comm_remote_size(MPI_Comm comm, int *size); __attribute__((visibility("default"))) int PMPI_Comm_set_attr(MPI_Comm comm, int comm_keyval, void *attribute_val); __attribute__((visibility("default"))) int PMPI_Comm_set_errhandler(MPI_Comm comm, MPI_Errhandler errhandler); __attribute__((visibility("default"))) int PMPI_Comm_set_name(MPI_Comm comm, char *comm_name); __attribute__((visibility("default"))) int PMPI_Comm_size(MPI_Comm comm, int *size); __attribute__((visibility("default"))) int PMPI_Comm_spawn(char *command, char **argv, int maxprocs, MPI_Info info, int root, MPI_Comm comm, MPI_Comm *intercomm, int *array_of_errcodes); __attribute__((visibility("default"))) int PMPI_Comm_spawn_multiple(int count, char **array_of_commands, char ***array_of_argv, int *array_of_maxprocs, MPI_Info *array_of_info, int root, MPI_Comm comm, MPI_Comm *intercomm, int *array_of_errcodes); __attribute__((visibility("default"))) int PMPI_Comm_split(MPI_Comm comm, int color, int key, MPI_Comm *newcomm); __attribute__((visibility("default"))) int PMPI_Comm_test_inter(MPI_Comm comm, int *flag); __attribute__((visibility("default"))) int PMPI_Dims_create(int nnodes, int ndims, int *dims); __attribute__((visibility("default"))) int PMPI_Errhandler_c2f(MPI_Errhandler errhandler); __attribute__((visibility("default"))) int PMPI_Errhandler_create(MPI_Handler_function *function, MPI_Errhandler *errhandler) ; __attribute__((visibility("default"))) MPI_Errhandler PMPI_Errhandler_f2c(int errhandler); __attribute__((visibility("default"))) int PMPI_Errhandler_free(MPI_Errhandler *errhandler); __attribute__((visibility("default"))) int PMPI_Errhandler_get(MPI_Comm comm, MPI_Errhandler *errhandler) ; __attribute__((visibility("default"))) int PMPI_Errhandler_set(MPI_Comm comm, MPI_Errhandler errhandler) ; __attribute__((visibility("default"))) int PMPI_Error_class(int errorcode, int *errorclass); __attribute__((visibility("default"))) int PMPI_Error_string(int errorcode, char *string, int *resultlen); __attribute__((visibility("default"))) int PMPI_Exscan(void *sendbuf, void *recvbuf, int count, MPI_Datatype datatype, MPI_Op op, MPI_Comm comm); __attribute__((visibility("default"))) int PMPI_File_c2f(MPI_File file); __attribute__((visibility("default"))) MPI_File PMPI_File_f2c(int file); __attribute__((visibility("default"))) int PMPI_File_call_errhandler(MPI_File fh, int errorcode); __attribute__((visibility("default"))) int PMPI_File_create_errhandler(MPI_File_errhandler_function *function, MPI_Errhandler *errhandler); __attribute__((visibility("default"))) int PMPI_File_set_errhandler( MPI_File file, MPI_Errhandler errhandler); __attribute__((visibility("default"))) int PMPI_File_get_errhandler( MPI_File file, MPI_Errhandler *errhandler); __attribute__((visibility("default"))) int PMPI_File_open(MPI_Comm comm, char *filename, int amode, MPI_Info info, MPI_File *fh); __attribute__((visibility("default"))) int PMPI_File_close(MPI_File *fh); __attribute__((visibility("default"))) int PMPI_File_delete(char *filename, MPI_Info info); __attribute__((visibility("default"))) int PMPI_File_set_size(MPI_File fh, MPI_Offset size); __attribute__((visibility("default"))) int PMPI_File_preallocate(MPI_File fh, MPI_Offset size); __attribute__((visibility("default"))) int PMPI_File_get_size(MPI_File fh, MPI_Offset *size); __attribute__((visibility("default"))) int PMPI_File_get_group(MPI_File fh, MPI_Group *group); __attribute__((visibility("default"))) int PMPI_File_get_amode(MPI_File fh, int *amode); __attribute__((visibility("default"))) int PMPI_File_set_info(MPI_File fh, MPI_Info info); __attribute__((visibility("default"))) int PMPI_File_get_info(MPI_File fh, MPI_Info *info_used); __attribute__((visibility("default"))) int PMPI_File_set_view(MPI_File fh, MPI_Offset disp, MPI_Datatype etype, MPI_Datatype filetype, char *datarep, MPI_Info info); __attribute__((visibility("default"))) int PMPI_File_get_view(MPI_File fh, MPI_Offset *disp, MPI_Datatype *etype, MPI_Datatype *filetype, char *datarep); __attribute__((visibility("default"))) int PMPI_File_read_at(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); __attribute__((visibility("default"))) int PMPI_File_read_at_all(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); __attribute__((visibility("default"))) int PMPI_File_write_at(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); __attribute__((visibility("default"))) int PMPI_File_write_at_all(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); __attribute__((visibility("default"))) int PMPI_File_iread_at(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype, MPI_Request *request); __attribute__((visibility("default"))) int PMPI_File_iwrite_at(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype, MPI_Request *request); __attribute__((visibility("default"))) int PMPI_File_read(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); __attribute__((visibility("default"))) int PMPI_File_read_all(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); __attribute__((visibility("default"))) int PMPI_File_write(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); __attribute__((visibility("default"))) int PMPI_File_write_all(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); __attribute__((visibility("default"))) int PMPI_File_iread(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Request *request); __attribute__((visibility("default"))) int PMPI_File_iwrite(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Request *request); __attribute__((visibility("default"))) int PMPI_File_seek(MPI_File fh, MPI_Offset offset, int whence); __attribute__((visibility("default"))) int PMPI_File_get_position(MPI_File fh, MPI_Offset *offset); __attribute__((visibility("default"))) int PMPI_File_get_byte_offset(MPI_File fh, MPI_Offset offset, MPI_Offset *disp); __attribute__((visibility("default"))) int PMPI_File_read_shared(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); __attribute__((visibility("default"))) int PMPI_File_write_shared(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); __attribute__((visibility("default"))) int PMPI_File_iread_shared(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Request *request); __attribute__((visibility("default"))) int PMPI_File_iwrite_shared(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Request *request); __attribute__((visibility("default"))) int PMPI_File_read_ordered(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); __attribute__((visibility("default"))) int PMPI_File_write_ordered(MPI_File fh, void *buf, int count, MPI_Datatype datatype, MPI_Status *status); __attribute__((visibility("default"))) int PMPI_File_seek_shared(MPI_File fh, MPI_Offset offset, int whence); __attribute__((visibility("default"))) int PMPI_File_get_position_shared(MPI_File fh, MPI_Offset *offset); __attribute__((visibility("default"))) int PMPI_File_read_at_all_begin(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype); __attribute__((visibility("default"))) int PMPI_File_read_at_all_end(MPI_File fh, void *buf, MPI_Status *status); __attribute__((visibility("default"))) int PMPI_File_write_at_all_begin(MPI_File fh, MPI_Offset offset, void *buf, int count, MPI_Datatype datatype); __attribute__((visibility("default"))) int PMPI_File_write_at_all_end(MPI_File fh, void *buf, MPI_Status *status); __attribute__((visibility("default"))) int PMPI_File_read_all_begin(MPI_File fh, void *buf, int count, MPI_Datatype datatype); __attribute__((visibility("default"))) int PMPI_File_read_all_end(MPI_File fh, void *buf, MPI_Status *status); __attribute__((visibility("default"))) int PMPI_File_write_all_begin(MPI_File fh, void *buf, int count, MPI_Datatype datatype); __attribute__((visibility("default"))) int PMPI_File_write_all_end(MPI_File fh, void *buf, MPI_Status *status); __attribute__((visibility("default"))) int PMPI_File_read_ordered_begin(MPI_File fh, void *buf, int count, Found header files ['mpi.h'] in ['/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include'] Popping language C ================================================================================ TEST configureConversion from config.packages.MPI(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/packages/MPI.py:214) TESTING: configureConversion from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:214) Check for the functions which convert communicators between C and Fortran - Define HAVE_MPI_COMM_F2C and HAVE_MPI_COMM_C2F if they are present - Some older MPI 1 implementations are missing these All intermediate test results are stored in /tmp/petsc-U9YCMv/config.packages.MPI sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.packages.MPI/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.packages.MPI/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.packages.MPI/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.packages.MPI/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.packages.MPI/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.packages.MPI Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.packages.MPI/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.packages.MPI -o /tmp/petsc-U9YCMv/config.packages.MPI/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { if (MPI_Comm_f2c((MPI_Fint)0)); ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.packages.MPI/conftest -fPIC -g /tmp/petsc-U9YCMv/config.packages.MPI/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.packages.MPI/conftest -fPIC -g /tmp/petsc-U9YCMv/config.packages.MPI/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.packages.MPI/conftest -fPIC -g /tmp/petsc-U9YCMv/config.packages.MPI/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Defined "HAVE_MPI_COMM_F2C" to "1" sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.packages.MPI/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.packages.MPI -fPIC -g /tmp/petsc-U9YCMv/config.packages.MPI/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.packages.MPI/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.packages.MPI -fPIC -g /tmp/petsc-U9YCMv/config.packages.MPI/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.packages.MPI/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.packages.MPI -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.packages.MPI Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.packages.MPI/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.packages.MPI -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.packages.MPI -o /tmp/petsc-U9YCMv/config.packages.MPI/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { if (MPI_Comm_c2f(MPI_COMM_WORLD)); ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.packages.MPI/conftest -fPIC -g /tmp/petsc-U9YCMv/config.packages.MPI/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.packages.MPI/conftest -fPIC -g /tmp/petsc-U9YCMv/config.packages.MPI/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.packages.MPI/conftest -fPIC -g /tmp/petsc-U9YCMv/config.packages.MPI/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Defined "HAVE_MPI_COMM_C2F" to "1" sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.packages.MPI/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.packages.MPI -fPIC -g /tmp/petsc-U9YCMv/config.packages.MPI/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.packages.MPI/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.packages.MPI -fPIC -g /tmp/petsc-U9YCMv/config.packages.MPI/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.packages.MPI/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.packages.MPI -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.packages.MPI Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.packages.MPI/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.packages.MPI -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.packages.MPI -o /tmp/petsc-U9YCMv/config.packages.MPI/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { MPI_Fint a; ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.packages.MPI/conftest -fPIC -g /tmp/petsc-U9YCMv/config.packages.MPI/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.packages.MPI/conftest -fPIC -g /tmp/petsc-U9YCMv/config.packages.MPI/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.packages.MPI/conftest -fPIC -g /tmp/petsc-U9YCMv/config.packages.MPI/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Defined "HAVE_MPI_FINT" to "1" ================================================================================ TEST configureMPI2 from config.packages.MPI(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/packages/MPI.py:182) TESTING: configureMPI2 from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:182) Check for functions added to the interface in MPI-2 sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.packages.MPI/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.packages.MPI -fPIC -g /tmp/petsc-U9YCMv/config.packages.MPI/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.packages.MPI/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.packages.MPI -fPIC -g /tmp/petsc-U9YCMv/config.packages.MPI/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.packages.MPI/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.packages.MPI -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.packages.MPI Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.packages.MPI/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.packages.MPI -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.packages.MPI -o /tmp/petsc-U9YCMv/config.packages.MPI/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int flag;if (MPI_Finalized(&flag)); ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.packages.MPI/conftest -fPIC -g /tmp/petsc-U9YCMv/config.packages.MPI/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.packages.MPI/conftest -fPIC -g /tmp/petsc-U9YCMv/config.packages.MPI/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.packages.MPI/conftest -fPIC -g /tmp/petsc-U9YCMv/config.packages.MPI/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Defined "HAVE_MPI_FINALIZED" to "1" sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.packages.MPI/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.packages.MPI -fPIC -g /tmp/petsc-U9YCMv/config.packages.MPI/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.packages.MPI/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.packages.MPI -fPIC -g /tmp/petsc-U9YCMv/config.packages.MPI/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.packages.MPI/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.packages.MPI -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.packages.MPI Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.packages.MPI/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.packages.MPI -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.packages.MPI -o /tmp/petsc-U9YCMv/config.packages.MPI/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { if (MPI_Allreduce(MPI_IN_PLACE,0, 1, MPI_INT, MPI_SUM, MPI_COMM_SELF)); ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.packages.MPI/conftest -fPIC -g /tmp/petsc-U9YCMv/config.packages.MPI/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.packages.MPI/conftest -fPIC -g /tmp/petsc-U9YCMv/config.packages.MPI/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.packages.MPI/conftest -fPIC -g /tmp/petsc-U9YCMv/config.packages.MPI/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Defined "HAVE_MPI_IN_PLACE" to "1" sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.packages.MPI/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.packages.MPI -fPIC -g /tmp/petsc-U9YCMv/config.packages.MPI/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.packages.MPI/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.packages.MPI -fPIC -g /tmp/petsc-U9YCMv/config.packages.MPI/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.packages.MPI/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.packages.MPI -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.packages.MPI Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.packages.MPI/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.packages.MPI -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.packages.MPI -o /tmp/petsc-U9YCMv/config.packages.MPI/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Possible ERROR while running compiler: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.packages.MPI/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.packages.MPI -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.packages.MPI Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.packages.MPI/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.packages.MPI -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.packages.MPI -o /tmp/petsc-U9YCMv/config.packages.MPI/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb error message = {/tmp/petsc-U9YCMv/config.packages.MPI/conftest.c: In function ‘main’: /tmp/petsc-U9YCMv/config.packages.MPI/conftest.c:6:1: warning: initialization makes pointer from integer without a cast [enabled by default] /tmp/petsc-U9YCMv/config.packages.MPI/conftest.c:6:1: warning: (near initialization for ‘old_types[1]’) [enabled by default] } Source: #include "confdefs.h" #include "conffix.h" #include int main() { int count=2; int blocklens[2]={0,1}; MPI_Aint indices[2]={0,1}; MPI_Datatype old_types[2]={0,1}; MPI_Datatype *newtype = 0; if (MPI_Type_create_struct(count, blocklens, indices, old_types, newtype)); ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.packages.MPI/conftest -fPIC -g /tmp/petsc-U9YCMv/config.packages.MPI/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.packages.MPI/conftest -fPIC -g /tmp/petsc-U9YCMv/config.packages.MPI/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.packages.MPI/conftest -fPIC -g /tmp/petsc-U9YCMv/config.packages.MPI/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.packages.MPI/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.packages.MPI -fPIC -g /tmp/petsc-U9YCMv/config.packages.MPI/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.packages.MPI/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.packages.MPI -fPIC -g /tmp/petsc-U9YCMv/config.packages.MPI/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.packages.MPI/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.packages.MPI -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.packages.MPI Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.packages.MPI/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.packages.MPI -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.packages.MPI -o /tmp/petsc-U9YCMv/config.packages.MPI/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { MPI_Comm_errhandler_fn * p_err_fun = 0; MPI_Errhandler * p_errhandler = 0; if (MPI_Comm_create_errhandler(p_err_fun,p_errhandler)); ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.packages.MPI/conftest -fPIC -g /tmp/petsc-U9YCMv/config.packages.MPI/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.packages.MPI/conftest -fPIC -g /tmp/petsc-U9YCMv/config.packages.MPI/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.packages.MPI/conftest -fPIC -g /tmp/petsc-U9YCMv/config.packages.MPI/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.packages.MPI/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.packages.MPI -fPIC -g /tmp/petsc-U9YCMv/config.packages.MPI/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.packages.MPI/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.packages.MPI -fPIC -g /tmp/petsc-U9YCMv/config.packages.MPI/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.packages.MPI/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.packages.MPI -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.packages.MPI Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.packages.MPI/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.packages.MPI -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.packages.MPI -o /tmp/petsc-U9YCMv/config.packages.MPI/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { if (MPI_Comm_set_errhandler(MPI_COMM_WORLD,MPI_ERRORS_RETURN)); ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.packages.MPI/conftest -fPIC -g /tmp/petsc-U9YCMv/config.packages.MPI/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.packages.MPI/conftest -fPIC -g /tmp/petsc-U9YCMv/config.packages.MPI/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.packages.MPI/conftest -fPIC -g /tmp/petsc-U9YCMv/config.packages.MPI/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt ================================================================================ TEST configureTypes from config.packages.MPI(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/packages/MPI.py:234) TESTING: configureTypes from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:234) Checking for MPI types Checking for size of type: MPI_Comm Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.types/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -fPIC -g /tmp/petsc-U9YCMv/config.types/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.types/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -fPIC -g /tmp/petsc-U9YCMv/config.types/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.types/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.types Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.types/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.types -o /tmp/petsc-U9YCMv/config.types/conftest.o Error: Compilation Failed Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.types -o /tmp/petsc-U9YCMv/config.types/conftest.o Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g /tmp/petsc-U9YCMv/config.types/conftest.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/config.types -o /tmp/petsc-U9YCMv/config.types/conftest.o Looking for file: conftest.o Possible ERROR while running compiler: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.types/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.types Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.types/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.types -o /tmp/petsc-U9YCMv/config.types/conftest.o Error: Compilation Failed Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.types -o /tmp/petsc-U9YCMv/config.types/conftest.o Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g /tmp/petsc-U9YCMv/config.types/conftest.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/config.types -o /tmp/petsc-U9YCMv/config.types/conftest.o Looking for file: conftest.o error message = {/tmp/petsc-U9YCMv/config.types/conftest.c: In function ‘main’: /tmp/petsc-U9YCMv/config.types/conftest.c:17:1: error: unknown type name ‘FILE’ /tmp/petsc-U9YCMv/config.types/conftest.c:17:11: warning: initialization makes pointer from integer without a cast [enabled by default] /tmp/petsc-U9YCMv/config.types/conftest.c:19:9: warning: incompatible implicit declaration of built-in function ‘exit’ [enabled by default] /tmp/petsc-U9YCMv/config.types/conftest.c:20:1: warning: incompatible implicit declaration of built-in function ‘fprintf’ [enabled by default] } Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #include #endif #define MPICH_IGNORE_CXX_SEEK #define MPICH_SKIP_MPICXX 1 #define OMPI_SKIP_MPICXX 1 #include int main() { FILE *f = fopen("conftestval", "w"); if (!f) exit(1); fprintf(f, "%lu\n", (unsigned long)sizeof(MPI_Comm)); ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.types/conftest -fPIC -g /tmp/petsc-U9YCMv/config.types/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.types/conftest -fPIC -g /tmp/petsc-U9YCMv/config.types/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.types/conftest -fPIC -g /tmp/petsc-U9YCMv/config.types/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Executing: /tmp/petsc-U9YCMv/config.types/conftest sh: /tmp/petsc-U9YCMv/config.types/conftest Executing: /tmp/petsc-U9YCMv/config.types/conftest sh: Popping language C Defined "SIZEOF_MPI_COMM" to "8" Checking for size of type: MPI_Fint Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.types/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -fPIC -g /tmp/petsc-U9YCMv/config.types/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.types/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -fPIC -g /tmp/petsc-U9YCMv/config.types/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.types/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.types Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.types/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.types -o /tmp/petsc-U9YCMv/config.types/conftest.o Error: Compilation Failed Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.types -o /tmp/petsc-U9YCMv/config.types/conftest.o Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g /tmp/petsc-U9YCMv/config.types/conftest.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/config.types -o /tmp/petsc-U9YCMv/config.types/conftest.o Looking for file: conftest.o Possible ERROR while running compiler: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.types/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.types Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.types/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.types -o /tmp/petsc-U9YCMv/config.types/conftest.o Error: Compilation Failed Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.types -o /tmp/petsc-U9YCMv/config.types/conftest.o Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g /tmp/petsc-U9YCMv/config.types/conftest.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/config.types -o /tmp/petsc-U9YCMv/config.types/conftest.o Looking for file: conftest.o error message = {/tmp/petsc-U9YCMv/config.types/conftest.c: In function ‘main’: /tmp/petsc-U9YCMv/config.types/conftest.c:17:1: error: unknown type name ‘FILE’ /tmp/petsc-U9YCMv/config.types/conftest.c:17:11: warning: initialization makes pointer from integer without a cast [enabled by default] /tmp/petsc-U9YCMv/config.types/conftest.c:19:9: warning: incompatible implicit declaration of built-in function ‘exit’ [enabled by default] /tmp/petsc-U9YCMv/config.types/conftest.c:20:1: warning: incompatible implicit declaration of built-in function ‘fprintf’ [enabled by default] } Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #include #endif #define MPICH_IGNORE_CXX_SEEK #define MPICH_SKIP_MPICXX 1 #define OMPI_SKIP_MPICXX 1 #include int main() { FILE *f = fopen("conftestval", "w"); if (!f) exit(1); fprintf(f, "%lu\n", (unsigned long)sizeof(MPI_Fint)); ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.types/conftest -fPIC -g /tmp/petsc-U9YCMv/config.types/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.types/conftest -fPIC -g /tmp/petsc-U9YCMv/config.types/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.types/conftest -fPIC -g /tmp/petsc-U9YCMv/config.types/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Executing: /tmp/petsc-U9YCMv/config.types/conftest sh: /tmp/petsc-U9YCMv/config.types/conftest Executing: /tmp/petsc-U9YCMv/config.types/conftest sh: Popping language C Defined "SIZEOF_MPI_FINT" to "4" ================================================================================ TEST configureMPITypes from config.packages.MPI(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/packages/MPI.py:246) TESTING: configureMPITypes from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:246) Checking for MPI Datatype handles sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.packages.MPI/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -fPIC -g /tmp/petsc-U9YCMv/config.packages.MPI/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.packages.MPI/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -fPIC -g /tmp/petsc-U9YCMv/config.packages.MPI/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.packages.MPI/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.packages.MPI Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.packages.MPI/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.packages.MPI -o /tmp/petsc-U9YCMv/config.packages.MPI/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Possible ERROR while running compiler: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.packages.MPI/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.packages.MPI Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.packages.MPI/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.packages.MPI -o /tmp/petsc-U9YCMv/config.packages.MPI/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb error message = {/tmp/petsc-U9YCMv/config.packages.MPI/conftest.c: In function ‘main’: /tmp/petsc-U9YCMv/config.packages.MPI/conftest.c:13:25: warning: incompatible implicit declaration of built-in function ‘exit’ [enabled by default] } Source: #include "confdefs.h" #include "conffix.h" #ifdef PETSC_HAVE_STDLIB_H #include #endif #include int main() { MPI_Aint size; int ierr; MPI_Init(0,0); ierr = MPI_Type_extent(MPI_LONG_DOUBLE, &size); if(ierr || (size == 0)) exit(1); MPI_Finalize(); ; return 0; } Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.packages.MPI/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -fPIC -g /tmp/petsc-U9YCMv/config.packages.MPI/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.packages.MPI/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -fPIC -g /tmp/petsc-U9YCMv/config.packages.MPI/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.packages.MPI/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.packages.MPI Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.packages.MPI/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.packages.MPI -o /tmp/petsc-U9YCMv/config.packages.MPI/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Possible ERROR while running compiler: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.packages.MPI/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.packages.MPI Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.packages.MPI/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.packages.MPI -o /tmp/petsc-U9YCMv/config.packages.MPI/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb error message = {/tmp/petsc-U9YCMv/config.packages.MPI/conftest.c: In function ‘main’: /tmp/petsc-U9YCMv/config.packages.MPI/conftest.c:13:25: warning: incompatible implicit declaration of built-in function ‘exit’ [enabled by default] } Source: #include "confdefs.h" #include "conffix.h" #ifdef PETSC_HAVE_STDLIB_H #include #endif #include int main() { MPI_Aint size; int ierr; MPI_Init(0,0); ierr = MPI_Type_extent(MPI_LONG_DOUBLE, &size); if(ierr || (size == 0)) exit(1); MPI_Finalize(); ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.packages.MPI/conftest -fPIC -g /tmp/petsc-U9YCMv/config.packages.MPI/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.packages.MPI/conftest -fPIC -g /tmp/petsc-U9YCMv/config.packages.MPI/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.packages.MPI/conftest -fPIC -g /tmp/petsc-U9YCMv/config.packages.MPI/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Executing: /tmp/petsc-U9YCMv/config.packages.MPI/conftest sh: /tmp/petsc-U9YCMv/config.packages.MPI/conftest Executing: /tmp/petsc-U9YCMv/config.packages.MPI/conftest sh: ERROR while running executable: Could not execute "/tmp/petsc-U9YCMv/config.packages.MPI/conftest": Segmentation fault (core dumped) Popping language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.packages.MPI/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -fPIC -g /tmp/petsc-U9YCMv/config.packages.MPI/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.packages.MPI/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -fPIC -g /tmp/petsc-U9YCMv/config.packages.MPI/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.packages.MPI/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.packages.MPI Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.packages.MPI/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.packages.MPI -o /tmp/petsc-U9YCMv/config.packages.MPI/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Possible ERROR while running compiler: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.packages.MPI/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.packages.MPI Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.packages.MPI/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.packages.MPI -o /tmp/petsc-U9YCMv/config.packages.MPI/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb error message = {/tmp/petsc-U9YCMv/config.packages.MPI/conftest.c: In function ‘main’: /tmp/petsc-U9YCMv/config.packages.MPI/conftest.c:13:25: warning: incompatible implicit declaration of built-in function ‘exit’ [enabled by default] } Source: #include "confdefs.h" #include "conffix.h" #ifdef PETSC_HAVE_STDLIB_H #include #endif #include int main() { MPI_Aint size; int ierr; MPI_Init(0,0); ierr = MPI_Type_extent(MPI_C_DOUBLE_COMPLEX, &size); if(ierr || (size == 0)) exit(1); MPI_Finalize(); ; return 0; } Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.packages.MPI/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -fPIC -g /tmp/petsc-U9YCMv/config.packages.MPI/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.packages.MPI/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -fPIC -g /tmp/petsc-U9YCMv/config.packages.MPI/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.packages.MPI/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.packages.MPI Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.packages.MPI/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.packages.MPI -o /tmp/petsc-U9YCMv/config.packages.MPI/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Possible ERROR while running compiler: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.packages.MPI/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.packages.MPI Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.packages.MPI/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.packages.MPI -o /tmp/petsc-U9YCMv/config.packages.MPI/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb error message = {/tmp/petsc-U9YCMv/config.packages.MPI/conftest.c: In function ‘main’: /tmp/petsc-U9YCMv/config.packages.MPI/conftest.c:13:25: warning: incompatible implicit declaration of built-in function ‘exit’ [enabled by default] } Source: #include "confdefs.h" #include "conffix.h" #ifdef PETSC_HAVE_STDLIB_H #include #endif #include int main() { MPI_Aint size; int ierr; MPI_Init(0,0); ierr = MPI_Type_extent(MPI_C_DOUBLE_COMPLEX, &size); if(ierr || (size == 0)) exit(1); MPI_Finalize(); ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.packages.MPI/conftest -fPIC -g /tmp/petsc-U9YCMv/config.packages.MPI/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.packages.MPI/conftest -fPIC -g /tmp/petsc-U9YCMv/config.packages.MPI/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.packages.MPI/conftest -fPIC -g /tmp/petsc-U9YCMv/config.packages.MPI/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Executing: /tmp/petsc-U9YCMv/config.packages.MPI/conftest sh: /tmp/petsc-U9YCMv/config.packages.MPI/conftest Executing: /tmp/petsc-U9YCMv/config.packages.MPI/conftest sh: ERROR while running executable: Could not execute "/tmp/petsc-U9YCMv/config.packages.MPI/conftest": Segmentation fault (core dumped) Popping language C ================================================================================ TEST configureMissingPrototypes from config.packages.MPI(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/packages/MPI.py:319) TESTING: configureMissingPrototypes from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:319) Checks for missing prototypes, which it adds to petscfix.h ================================================================================ TEST SGIMPICheck from config.packages.MPI(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/packages/MPI.py:630) TESTING: SGIMPICheck from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:630) Returns true if SGI MPI is used Checking for function MPI_SGI_barrier in library [] [] Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.libraries/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -o /tmp/petsc-U9YCMv/config.libraries/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPI_SGI_barrier(); int main() { MPI_SGI_barrier() ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Possible ERROR while running linker: /tmp/petsc-U9YCMv/config.libraries/conftest.o: In function `main': /tmp/petsc-U9YCMv/config.libraries/conftest.c:7: undefined reference to `MPI_SGI_barrier' collect2: error: ld returned 1 exit status /tmp/petsc-U9YCMv/config.libraries/conftest.o: In function `main': /tmp/petsc-U9YCMv/config.libraries/conftest.c:7: undefined reference to `MPI_SGI_barrier' collect2: error: ld returned 1 exit status make: *** [all] Error 1 output: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt ret = 256 error message = {/tmp/petsc-U9YCMv/config.libraries/conftest.o: In function `main': /tmp/petsc-U9YCMv/config.libraries/conftest.c:7: undefined reference to `MPI_SGI_barrier' collect2: error: ld returned 1 exit status /tmp/petsc-U9YCMv/config.libraries/conftest.o: In function `main': /tmp/petsc-U9YCMv/config.libraries/conftest.c:7: undefined reference to `MPI_SGI_barrier' collect2: error: ld returned 1 exit status make: *** [all] Error 1 } Pushing language C Popping language C in tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPI_SGI_barrier(); int main() { MPI_SGI_barrier() ; return 0; } Popping language C SGI MPI test failure ================================================================================ TEST CxxMPICheck from config.packages.MPI(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/packages/MPI.py:640) TESTING: CxxMPICheck from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:640) Make sure C++ can compile and link Pushing language Cxx Checking for header mpi.h sh: mpicxx -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.libraries -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g -fPIC /tmp/petsc-U9YCMv/config.libraries/conftest.cc Executing: mpicxx -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.libraries -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g -fPIC /tmp/petsc-U9YCMv/config.libraries/conftest.cc sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { ; return 0; } Checking for C++ MPI_Finalize() Checking for function MPI_Finalize in library [] [] Pushing language Cxx sh: mpicxx -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.libraries -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g -fPIC /tmp/petsc-U9YCMv/config.libraries/conftest.cc Executing: mpicxx -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.libraries -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g -fPIC /tmp/petsc-U9YCMv/config.libraries/conftest.cc sh: Possible ERROR while running compiler: error message = {/tmp/petsc-U9YCMv/config.libraries/conftest.cc: In function ‘int main()’: /tmp/petsc-U9YCMv/config.libraries/conftest.cc:7:5: warning: variable ‘ierr’ set but not used [-Wunused-but-set-variable] } Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include int main() { int ierr; ierr = MPI_Finalize();; return 0; } Pushing language CXX Popping language CXX sh: mpicxx -o /tmp/petsc-U9YCMv/config.libraries/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: mpicxx -o /tmp/petsc-U9YCMv/config.libraries/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Popping language Cxx Popping language Cxx ================================================================================ TEST FortranMPICheck from config.packages.MPI(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/packages/MPI.py:658) TESTING: FortranMPICheck from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:658) Make sure fortran include [mpif.h] and library symbols are found Pushing language FC Checking for header mpif.h sh: mpif90 -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -fPIC -Wall -Wno-unused-variable -Wno-unused-dummy-argument -g /tmp/petsc-U9YCMv/config.libraries/conftest.F Executing: mpif90 -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -fPIC -Wall -Wno-unused-variable -Wno-unused-dummy-argument -g /tmp/petsc-U9YCMv/config.libraries/conftest.F sh: Successful compile: Source: program main include 'mpif.h' end Checking for fortran mpi_init() Checking for function in library [] [] Pushing language FC sh: mpif90 -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -fPIC -Wall -Wno-unused-variable -Wno-unused-dummy-argument -g /tmp/petsc-U9YCMv/config.libraries/conftest.F Executing: mpif90 -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -fPIC -Wall -Wno-unused-variable -Wno-unused-dummy-argument -g /tmp/petsc-U9YCMv/config.libraries/conftest.F sh: Successful compile: Source: program main include 'mpif.h' integer ierr call mpi_init(ierr) end Pushing language FC Popping language FC sh: mpif90 -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -Wall -Wno-unused-variable -Wno-unused-dummy-argument -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: mpif90 -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -Wall -Wno-unused-variable -Wno-unused-dummy-argument -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Popping language FC Checking for mpi.mod Checking for function in library [] [] Pushing language FC sh: mpif90 -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -fPIC -Wall -Wno-unused-variable -Wno-unused-dummy-argument -g /tmp/petsc-U9YCMv/config.libraries/conftest.F Executing: mpif90 -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.libraries -fPIC -Wall -Wno-unused-variable -Wno-unused-dummy-argument -g /tmp/petsc-U9YCMv/config.libraries/conftest.F sh: Successful compile: Source: program main use mpi integer ierr,rank call mpi_init(ierr) call mpi_comm_rank(MPI_COMM_WORLD,rank,ierr) end Pushing language FC Popping language FC sh: mpif90 -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -Wall -Wno-unused-variable -Wno-unused-dummy-argument -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: mpif90 -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -Wall -Wno-unused-variable -Wno-unused-dummy-argument -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Popping language FC Defined "HAVE_MPI_F90MODULE" to "1" Popping language FC ================================================================================ TEST configureIO from config.packages.MPI(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/packages/MPI.py:683) TESTING: configureIO from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:683) Check for the functions in MPI/IO - Define HAVE_MPIIO if they are present - Some older MPI 1 implementations are missing these sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.packages.MPI/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.packages.MPI/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.packages.MPI/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.packages.MPI/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.packages.MPI/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.packages.MPI Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.packages.MPI/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.packages.MPI -o /tmp/petsc-U9YCMv/config.packages.MPI/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { MPI_Aint lb, extent; if (MPI_Type_get_extent(MPI_INT, &lb, &extent)); ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.packages.MPI/conftest -fPIC -g /tmp/petsc-U9YCMv/config.packages.MPI/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.packages.MPI/conftest -fPIC -g /tmp/petsc-U9YCMv/config.packages.MPI/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.packages.MPI/conftest -fPIC -g /tmp/petsc-U9YCMv/config.packages.MPI/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.packages.MPI/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.packages.MPI/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.packages.MPI/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.packages.MPI/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.packages.MPI/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.packages.MPI Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.packages.MPI/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.packages.MPI -o /tmp/petsc-U9YCMv/config.packages.MPI/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { MPI_File fh; void *buf; MPI_Status status; if (MPI_File_write_all(fh, buf, 1, MPI_INT, &status)); ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.packages.MPI/conftest -fPIC -g /tmp/petsc-U9YCMv/config.packages.MPI/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.packages.MPI/conftest -fPIC -g /tmp/petsc-U9YCMv/config.packages.MPI/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.packages.MPI/conftest -fPIC -g /tmp/petsc-U9YCMv/config.packages.MPI/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.packages.MPI/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.packages.MPI/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.packages.MPI/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.packages.MPI/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.packages.MPI/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.packages.MPI Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.packages.MPI/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.packages.MPI -o /tmp/petsc-U9YCMv/config.packages.MPI/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { MPI_File fh; void *buf; MPI_Status status; if (MPI_File_read_all(fh, buf, 1, MPI_INT, &status)); ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.packages.MPI/conftest -fPIC -g /tmp/petsc-U9YCMv/config.packages.MPI/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.packages.MPI/conftest -fPIC -g /tmp/petsc-U9YCMv/config.packages.MPI/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.packages.MPI/conftest -fPIC -g /tmp/petsc-U9YCMv/config.packages.MPI/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.packages.MPI/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.packages.MPI/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.packages.MPI/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.packages.MPI/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.packages.MPI/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.packages.MPI Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.packages.MPI/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.packages.MPI -o /tmp/petsc-U9YCMv/config.packages.MPI/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { MPI_File fh; MPI_Offset disp; MPI_Info info; if (MPI_File_set_view(fh, disp, MPI_INT, MPI_INT, "", info)); ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.packages.MPI/conftest -fPIC -g /tmp/petsc-U9YCMv/config.packages.MPI/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.packages.MPI/conftest -fPIC -g /tmp/petsc-U9YCMv/config.packages.MPI/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.packages.MPI/conftest -fPIC -g /tmp/petsc-U9YCMv/config.packages.MPI/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.packages.MPI/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.packages.MPI/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.packages.MPI/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.packages.MPI/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.packages.MPI/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.packages.MPI Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.packages.MPI/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.packages.MPI -o /tmp/petsc-U9YCMv/config.packages.MPI/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { MPI_File fh; MPI_Info info; if (MPI_File_open(MPI_COMM_SELF, "", 0, info, &fh)); ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.packages.MPI/conftest -fPIC -g /tmp/petsc-U9YCMv/config.packages.MPI/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.packages.MPI/conftest -fPIC -g /tmp/petsc-U9YCMv/config.packages.MPI/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.packages.MPI/conftest -fPIC -g /tmp/petsc-U9YCMv/config.packages.MPI/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.packages.MPI/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.packages.MPI/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.packages.MPI/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.packages.MPI/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.packages.MPI/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.packages.MPI Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.packages.MPI/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.packages.MPI -o /tmp/petsc-U9YCMv/config.packages.MPI/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { MPI_File fh; MPI_Info info; if (MPI_File_close(&fh)); ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.packages.MPI/conftest -fPIC -g /tmp/petsc-U9YCMv/config.packages.MPI/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.packages.MPI/conftest -fPIC -g /tmp/petsc-U9YCMv/config.packages.MPI/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.packages.MPI/conftest -fPIC -g /tmp/petsc-U9YCMv/config.packages.MPI/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Defined "HAVE_MPIIO" to "1" ================================================================================ TEST findMPIInc from config.packages.MPI(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/packages/MPI.py:720) TESTING: findMPIInc from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:720) Find MPI include paths from "mpicc -show" sh: tau_cc.sh -show Executing: tau_cc.sh -show sh: gcc -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s compilers: Checking arg gcc compilers: Checking arg -I/home/hills/seska/packages/tau/include compilers: Found include directory: /home/hills/seska/packages/tau/include compilers: Checking arg -I/home/hills/seska/packages/openmpi/include compilers: Found include directory: /home/hills/seska/packages/openmpi/include compilers: Checking arg -I/home/hills/seska/packages/openmpi/include/openmpi compilers: Found include directory: /home/hills/seska/packages/openmpi/include/openmpi compilers: Checking arg -I/home/hills/seska/packages/openmpi/include/openmpi/ompi compilers: Found include directory: /home/hills/seska/packages/openmpi/include/openmpi/ompi compilers: Checking arg -I/home/hills/seska/packages/openmpi/lib compilers: Found include directory: /home/hills/seska/packages/openmpi/lib compilers: Checking arg -DPROFILING_ON compilers: Checking arg -DTAU_GNU compilers: Checking arg -DTAU_DOT_H_LESS_HEADERS compilers: Checking arg -DTAU_MPI compilers: Checking arg -DTAU_UNIFY compilers: Checking arg -DTAU_MPI_THREADED compilers: Checking arg -DTAU_LINUX_TIMERS compilers: Checking arg -DTAU_MPIGREQUEST compilers: Checking arg -DTAU_MPIDATAREP compilers: Checking arg -DTAU_MPIERRHANDLER compilers: Checking arg -DTAU_MPIATTRFUNCTION compilers: Checking arg -DTAU_MPITYPEEX compilers: Checking arg -DTAU_MPIADDERROR compilers: Checking arg -DTAU_LARGEFILE compilers: Checking arg -D_LARGEFILE64_SOURCE compilers: Checking arg -DTAU_BFD compilers: Checking arg -DTAU_MPIFILE compilers: Checking arg -DHAVE_GNU_DEMANGLE compilers: Checking arg -DHAVE_TR1_HASH_MAP compilers: Checking arg -DTAU_SS_ALLOC_SUPPORT compilers: Checking arg -DEBS_CLOCK_RES=1 compilers: Checking arg -DTAU_STRSIGNAL_OK compilers: Checking arg -DTAU_TRACK_LD_LOADER compilers: Checking arg -L/home/hills/seska/packages/openmpi/lib compilers: Checking arg -lmpi_f77 compilers: Checking arg -L/home/hills/seska/packages/tau/x86_64/lib compilers: Checking arg -lTauMpi-mpi-pdt compilers: Checking arg -fPIC compilers: Checking arg -Wall compilers: Checking arg -Wwrite-strings compilers: Checking arg -Wno-strict-aliasing compilers: Checking arg -Wno-unknown-pragmas compilers: Checking arg -g3 compilers: Checking arg -fno-inline compilers: Checking arg -O0 compilers: Checking arg -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include compilers: Found include directory: /home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include compilers: Checking arg -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib compilers: Checking arg -Wl,-rpath compilers: Checking arg -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib compilers: Checking arg -lmpich compilers: Checking arg -lopa compilers: Checking arg -lmpl compilers: Checking arg -lrt compilers: Checking arg -lpthread compilers: Checking arg -lmpi compilers: Checking arg -lmpi_cxx compilers: Checking arg -lmpi_f90 compilers: Checking arg -lmpi_f77 compilers: Checking arg -Wl,-rpath,/home/hills/seska/packages/openmpi/lib compilers: Checking arg -L/home/hills/seska/packages/tau/x86_64/lib compilers: Checking arg -ltau-mpi-pdt compilers: Checking arg -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib compilers: Checking arg -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 compilers: Checking arg -lbfd compilers: Checking arg -liberty compilers: Checking arg -Wl,--export-dynamic compilers: Checking arg -lrt compilers: Checking arg -L/home/hills/seska/packages/openmpi/lib compilers: Checking arg -fPIC compilers: Checking arg -Wall compilers: Checking arg -Wwrite-strings compilers: Checking arg -Wno-strict-aliasing compilers: Checking arg -Wno-unknown-pragmas compilers: Checking arg -g3 compilers: Checking arg -fno-inline compilers: Checking arg -O0 compilers: Checking arg -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include compilers: Found include directory: /home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include compilers: Checking arg -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib compilers: Checking arg -Wl,-rpath compilers: Checking arg -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib compilers: Checking arg -lmpich compilers: Checking arg -lopa compilers: Checking arg -lmpl compilers: Checking arg -lrt compilers: Checking arg -lpthread compilers: Checking arg -lmpi compilers: Checking arg -lmpi_cxx compilers: Checking arg -lmpi_f90 compilers: Checking arg -lmpi_f77 compilers: Checking arg -Wl,-rpath,/home/hills/seska/packages/openmpi/lib compilers: Checking arg -ldl compilers: Checking arg -lm compilers: Checking arg -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ compilers: Checking arg -lstdc++ compilers: Checking arg -lgcc_s Checking for function MPI_Alltoallw in library [] [] Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.libraries/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -o /tmp/petsc-U9YCMv/config.libraries/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPI_Alltoallw(); int main() { MPI_Alltoallw() ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Popping language C Checking for function MPI_Type_create_indexed_block in library [] [] Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.libraries/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -o /tmp/petsc-U9YCMv/config.libraries/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPI_Type_create_indexed_block(); int main() { MPI_Type_create_indexed_block() ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Popping language C Defined "HAVE_MPI_ALLTOALLW" to "1" Checking for function MPI_Win_create in library [] [] Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.libraries/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -o /tmp/petsc-U9YCMv/config.libraries/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPI_Win_create(); int main() { MPI_Win_create() ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Popping language C Defined "HAVE_MPI_WIN_CREATE" to "1" Defined "HAVE_MPI_REPLACE" to "1" Checking for function MPI_Comm_spawn in library [] [] Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.libraries/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -o /tmp/petsc-U9YCMv/config.libraries/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPI_Comm_spawn(); int main() { MPI_Comm_spawn() ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Popping language C Defined "HAVE_MPI_COMM_SPAWN" to "1" Checking for function MPI_Type_get_envelope in library [] [] Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.libraries/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -o /tmp/petsc-U9YCMv/config.libraries/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPI_Type_get_envelope(); int main() { MPI_Type_get_envelope() ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Popping language C Defined "HAVE_MPI_TYPE_GET_ENVELOPE" to "1" Checking for function MPI_Type_get_extent in library [] [] Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.libraries/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -o /tmp/petsc-U9YCMv/config.libraries/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPI_Type_get_extent(); int main() { MPI_Type_get_extent() ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Popping language C Defined "HAVE_MPI_TYPE_GET_EXTENT" to "1" Checking for function MPI_Type_dup in library [] [] Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.libraries/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -o /tmp/petsc-U9YCMv/config.libraries/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPI_Type_dup(); int main() { MPI_Type_dup() ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Popping language C Defined "HAVE_MPI_TYPE_DUP" to "1" Checking for function MPI_Init_thread in library [] [] Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.libraries/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -o /tmp/petsc-U9YCMv/config.libraries/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPI_Init_thread(); int main() { MPI_Init_thread() ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Popping language C Defined "HAVE_MPI_INIT_THREAD" to "1" Checking for function MPIX_Iallreduce in library [] [] Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.libraries/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -o /tmp/petsc-U9YCMv/config.libraries/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPIX_Iallreduce(); int main() { MPIX_Iallreduce() ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Possible ERROR while running linker: /tmp/petsc-U9YCMv/config.libraries/conftest.o: In function `main': /tmp/petsc-U9YCMv/config.libraries/conftest.c:7: undefined reference to `MPIX_Iallreduce' collect2: error: ld returned 1 exit status /tmp/petsc-U9YCMv/config.libraries/conftest.o: In function `main': /tmp/petsc-U9YCMv/config.libraries/conftest.c:7: undefined reference to `MPIX_Iallreduce' collect2: error: ld returned 1 exit status make: *** [all] Error 1 output: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt ret = 256 error message = {/tmp/petsc-U9YCMv/config.libraries/conftest.o: In function `main': /tmp/petsc-U9YCMv/config.libraries/conftest.c:7: undefined reference to `MPIX_Iallreduce' collect2: error: ld returned 1 exit status /tmp/petsc-U9YCMv/config.libraries/conftest.o: In function `main': /tmp/petsc-U9YCMv/config.libraries/conftest.c:7: undefined reference to `MPIX_Iallreduce' collect2: error: ld returned 1 exit status make: *** [all] Error 1 } Pushing language C Popping language C in tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPIX_Iallreduce(); int main() { MPIX_Iallreduce() ; return 0; } Popping language C Checking for function MPI_Iallreduce in library [] [] Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.libraries/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -o /tmp/petsc-U9YCMv/config.libraries/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPI_Iallreduce(); int main() { MPI_Iallreduce() ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Popping language C Defined "HAVE_MPI_IALLREDUCE" to "1" Checking for function MPI_Ibarrier in library [] [] Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.libraries/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -o /tmp/petsc-U9YCMv/config.libraries/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPI_Ibarrier(); int main() { MPI_Ibarrier() ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Popping language C Defined "HAVE_MPI_IBARRIER" to "1" Checking for function MPI_Finalized in library [] [] Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.libraries/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -o /tmp/petsc-U9YCMv/config.libraries/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPI_Finalized(); int main() { MPI_Finalized() ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Popping language C Defined "HAVE_MPI_FINALIZED" to "1" Checking for function MPI_Exscan in library [] [] Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.libraries/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -o /tmp/petsc-U9YCMv/config.libraries/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPI_Exscan(); int main() { MPI_Exscan() ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Popping language C Defined "HAVE_MPI_EXSCAN" to "1" sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.packages.MPI/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include /tmp/petsc-U9YCMv/config.packages.MPI/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.packages.MPI/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include /tmp/petsc-U9YCMv/config.packages.MPI/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.packages.MPI/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.packages.MPI Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.packages.MPI/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.packages.MPI -o /tmp/petsc-U9YCMv/config.packages.MPI/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int combiner = MPI_COMBINER_DUP;; return 0; } Defined "HAVE_MPI_COMBINER_DUP" to "1" Checking for function MPIDI_CH3I_sock_set in library [] [] Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.libraries/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -o /tmp/petsc-U9YCMv/config.libraries/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPIDI_CH3I_sock_set(); int main() { MPIDI_CH3I_sock_set() ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Popping language C Defined "HAVE_MPICH_CH3_SOCK" to "1" Checking for function MPIDI_CH3I_sock_fixed_nbc_progress in library [] [] Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.libraries/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -o /tmp/petsc-U9YCMv/config.libraries/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPIDI_CH3I_sock_fixed_nbc_progress(); int main() { MPIDI_CH3I_sock_fixed_nbc_progress() ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Popping language C Defined "HAVE_MPICH_CH3_SOCK_FIXED_NBC_PROGRESS" to "1" ================================================================================ TEST checkSharedLibrary from config.packages.MPI(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/packages/MPI.py:132) TESTING: checkSharedLibrary from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:132) Sets flag indicating if MPI libraries are shared or not and determines if MPI libraries CANNOT be used by shared libraries ================================================================================ TEST configureMPIEXEC from config.packages.MPI(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/packages/MPI.py:145) TESTING: configureMPIEXEC from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:145) Checking for mpiexec Pushing language C Popping language C Checking for program /home/hills/seska/packages/tau/bin/mpiexec...not found Checking for program /home/hills/seska/packages/tau/bin/mpirun...not found Checking for program /home/hills/seska/packages/tau/bin/mprun...not found Checking for program /home/hills/seska/packages/tau/bin/mpiexec...not found Checking for program /home/hills/seska/packages/tau/bin/mpirun...not found Checking for program /home/hills/seska/packages/tau/bin/mprun...not found Checking for program /home/hills/seska/packages/mpd/bin/mpiexec...not found Checking for program /home/hills/seska/packages/mpd/bin/mpirun...not found Checking for program /home/hills/seska/packages/mpd/bin/mprun...not found Checking for program /home/hills/seska/packages/mpd/bin/mpiexec...not found Checking for program /home/hills/seska/packages/mpd/bin/mpirun...not found Checking for program /home/hills/seska/packages/mpd/bin/mprun...not found Checking for program /home/hills/seska/packages/openmpi/bin/mpiexec...found Defined make macro "MPIEXEC" to "/home/hills/seska/packages/openmpi/bin/mpiexec" sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.packages.MPI/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include /tmp/petsc-U9YCMv/config.packages.MPI/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.packages.MPI/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include /tmp/petsc-U9YCMv/config.packages.MPI/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.packages.MPI/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.packages.MPI Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.packages.MPI/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.packages.MPI -o /tmp/petsc-U9YCMv/config.packages.MPI/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #ifdef __cplusplus extern "C" #endif int init(int argc, char *argv[]) { int isInitialized; MPI_Init(&argc, &argv); MPI_Initialized(&isInitialized); return (int) isInitialized; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.packages.MPI/libconftest.so -shared -fPIC -g /tmp/petsc-U9YCMv/config.packages.MPI/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.packages.MPI/libconftest.so -shared -fPIC -g /tmp/petsc-U9YCMv/config.packages.MPI/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.packages.MPI/libconftest.so -shared -fPIC -g /tmp/petsc-U9YCMv/config.packages.MPI/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.packages.MPI/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include /tmp/petsc-U9YCMv/config.packages.MPI/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.packages.MPI/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include /tmp/petsc-U9YCMv/config.packages.MPI/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.packages.MPI/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.packages.MPI Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.packages.MPI/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.packages.MPI -o /tmp/petsc-U9YCMv/config.packages.MPI/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #ifdef __cplusplus extern "C" #endif int checkInit(void) { int isInitialized; MPI_Initialized(&isInitialized); if (isInitialized) MPI_Finalize(); return (int) isInitialized; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.packages.MPI/libconftest.so -shared -fPIC -g /tmp/petsc-U9YCMv/config.packages.MPI/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.packages.MPI/libconftest.so -shared -fPIC -g /tmp/petsc-U9YCMv/config.packages.MPI/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.packages.MPI/libconftest.so -shared -fPIC -g /tmp/petsc-U9YCMv/config.packages.MPI/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.libraries/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -o /tmp/petsc-U9YCMv/config.libraries/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #include #ifdef PETSC_HAVE_DLFCN_H #include #endif int main() { int argc = 1; char *argv[2] = {(char *) "conftest", NULL}; void *lib; int (*init)(int, char **); int (*checkInit)(void); lib = dlopen("/tmp/petsc-U9YCMv/config.libraries/lib1.so", RTLD_LAZY); if (!lib) { fprintf(stderr, "Could not open lib1.so: %s\n", dlerror()); exit(1); } init = (int (*)(int, char **)) dlsym(lib, "init"); if (!init) { fprintf(stderr, "Could not find initialization function\n"); exit(1); } if (!(*init)(argc, argv)) { fprintf(stderr, "Could not initialize library\n"); exit(1); } lib = dlopen("/tmp/petsc-U9YCMv/config.libraries/lib2.so", RTLD_LAZY); if (!lib) { fprintf(stderr, "Could not open lib2.so: %s\n", dlerror()); exit(1); } checkInit = (int (*)(void)) dlsym(lib, "checkInit"); if (!checkInit) { fprintf(stderr, "Could not find initialization check function\n"); exit(1); } if (!(*checkInit)()) { fprintf(stderr, "Did not link with shared library\n"); exit(2); } ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Executing: /home/hills/seska/packages/openmpi/bin/mpiexec /tmp/petsc-U9YCMv/config.libraries/conftest sh: /home/hills/seska/packages/openmpi/bin/mpiexec /tmp/petsc-U9YCMv/config.libraries/conftest Executing: /home/hills/seska/packages/openmpi/bin/mpiexec /tmp/petsc-U9YCMv/config.libraries/conftest sh: Library was shared Popping language C ================================================================================ TEST alternateConfigureLibrary from config.packages.hdf5(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/package.py:522) TESTING: alternateConfigureLibrary from config.packages.hdf5(config/BuildSystem/config/package.py:522) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.netcdf(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/package.py:522) TESTING: alternateConfigureLibrary from config.packages.netcdf(config/BuildSystem/config/package.py:522) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.netcdf-cxx(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/package.py:522) TESTING: alternateConfigureLibrary from config.packages.netcdf-cxx(config/BuildSystem/config/package.py:522) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.MOAB(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/package.py:522) TESTING: alternateConfigureLibrary from config.packages.MOAB(config/BuildSystem/config/package.py:522) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.exodusii(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/package.py:522) TESTING: alternateConfigureLibrary from config.packages.exodusii(config/BuildSystem/config/package.py:522) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.pcbddc(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/package.py:522) TESTING: alternateConfigureLibrary from PETSc.packages.pcbddc(config/BuildSystem/config/package.py:522) Called if --with-packagename=0; does nothing by default Not a clone of PETSc, don't need Sowing ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.babel(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/package.py:522) TESTING: alternateConfigureLibrary from PETSc.packages.babel(config/BuildSystem/config/package.py:522) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.ccafe(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/package.py:522) TESTING: alternateConfigureLibrary from PETSc.packages.ccafe(config/BuildSystem/config/package.py:522) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.PVODE(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/package.py:522) TESTING: alternateConfigureLibrary from PETSc.packages.PVODE(config/BuildSystem/config/package.py:522) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.ctetgen(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/package.py:522) TESTING: alternateConfigureLibrary from PETSc.packages.ctetgen(config/BuildSystem/config/package.py:522) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.papi(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/package.py:522) TESTING: alternateConfigureLibrary from PETSc.packages.papi(config/BuildSystem/config/package.py:522) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.Generator(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/package.py:522) TESTING: alternateConfigureLibrary from PETSc.packages.Generator(config/BuildSystem/config/package.py:522) Called if --with-packagename=0; does nothing by default Not a clone of PETSc, don't need Lgrind ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.Mathematica(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/package.py:522) TESTING: alternateConfigureLibrary from PETSc.packages.Mathematica(config/BuildSystem/config/package.py:522) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.scientificpython(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/package.py:522) TESTING: alternateConfigureLibrary from config.packages.scientificpython(config/BuildSystem/config/package.py:522) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.fiat(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/package.py:522) TESTING: alternateConfigureLibrary from config.packages.fiat(config/BuildSystem/config/package.py:522) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.FFC(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/package.py:522) TESTING: alternateConfigureLibrary from PETSc.packages.FFC(config/BuildSystem/config/package.py:522) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.tetgen(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/package.py:522) TESTING: alternateConfigureLibrary from PETSc.packages.tetgen(config/BuildSystem/config/package.py:522) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.fftw(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/package.py:522) TESTING: alternateConfigureLibrary from PETSc.packages.fftw(config/BuildSystem/config/package.py:522) Called if --with-packagename=0; does nothing by default Pushing language C ================================================================================ TEST configureLibrary from PETSc.packages.valgrind(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/package.py:464) TESTING: configureLibrary from PETSc.packages.valgrind(config/BuildSystem/config/package.py:464) Find an installation and check if it can work with PETSc ================================================================================== Checking for a functional valgrind Not checking for library in Package specific search directory VALGRIND: [] because no functions given to check for ================================================================================ TEST check from config.libraries(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/libraries.py:145) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:145) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for headers Package specific search directory VALGRIND: ['/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include'] Pushing language C ================================================================================ TEST checkInclude from config.headers(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/headers.py:86) TESTING: checkInclude from config.headers(config/BuildSystem/config/headers.py:86) Checks if a particular include file can be found along particular include paths Checking for header files ['valgrind/valgrind.h'] in ['/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include'] Checking include with compiler flags var CPPFLAGS ['/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include'] sh: tau_cc.sh -E -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.headers -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include /tmp/petsc-U9YCMv/config.headers/conftest.c Executing: tau_cc.sh -E -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.headers -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include /tmp/petsc-U9YCMv/config.headers/conftest.c sh: # 1 "/tmp/petsc-U9YCMv/config.headers/conftest.c" # 1 "" # 1 "/tmp/petsc-U9YCMv/config.headers/conftest.c" # 1 "/tmp/petsc-U9YCMv/config.headers/confdefs.h" 1 # 2 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 # 1 "/tmp/petsc-U9YCMv/config.headers/conffix.h" 1 # 3 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 Possible ERROR while running preprocessor: /tmp/petsc-U9YCMv/config.headers/conftest.c:3:31: fatal error: valgrind/valgrind.h: No such file or directory compilation terminated. make: *** [all] Error 1 ret = 256 error message = {/tmp/petsc-U9YCMv/config.headers/conftest.c:3:31: fatal error: valgrind/valgrind.h: No such file or directory compilation terminated. make: *** [all] Error 1 } Source: #include "confdefs.h" #include "conffix.h" #include Popping language C Not checking for library in Package specific search directory VALGRIND: [] because no functions given to check for ================================================================================ TEST check from config.libraries(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/libraries.py:145) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:145) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for headers Package specific search directory VALGRIND: ['/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include'] Pushing language C ================================================================================ TEST checkInclude from config.headers(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/headers.py:86) TESTING: checkInclude from config.headers(config/BuildSystem/config/headers.py:86) Checks if a particular include file can be found along particular include paths Checking for header files ['valgrind/valgrind.h'] in ['/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include'] Checking include with compiler flags var CPPFLAGS ['/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include'] sh: tau_cc.sh -E -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.headers -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include /tmp/petsc-U9YCMv/config.headers/conftest.c Executing: tau_cc.sh -E -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.headers -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include /tmp/petsc-U9YCMv/config.headers/conftest.c sh: # 1 "/tmp/petsc-U9YCMv/config.headers/conftest.c" # 1 "" # 1 "/tmp/petsc-U9YCMv/config.headers/conftest.c" # 1 "/tmp/petsc-U9YCMv/config.headers/confdefs.h" 1 # 2 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 # 1 "/tmp/petsc-U9YCMv/config.headers/conffix.h" 1 # 3 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 Possible ERROR while running preprocessor: /tmp/petsc-U9YCMv/config.headers/conftest.c:3:31: fatal error: valgrind/valgrind.h: No such file or directory compilation terminated. make: *** [all] Error 1 ret = 256 error message = {/tmp/petsc-U9YCMv/config.headers/conftest.c:3:31: fatal error: valgrind/valgrind.h: No such file or directory compilation terminated. make: *** [all] Error 1 } Source: #include "confdefs.h" #include "conffix.h" #include Popping language C Not checking for library in Package specific search directory VALGRIND: [] because no functions given to check for ================================================================================ TEST check from config.libraries(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/libraries.py:145) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:145) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for headers Package specific search directory VALGRIND: ['/usr/local/include', '/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include'] Pushing language C ================================================================================ TEST checkInclude from config.headers(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/headers.py:86) TESTING: checkInclude from config.headers(config/BuildSystem/config/headers.py:86) Checks if a particular include file can be found along particular include paths Checking for header files ['valgrind/valgrind.h'] in ['/usr/local/include', '/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include'] Checking include with compiler flags var CPPFLAGS ['/usr/local/include', '/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include'] sh: tau_cc.sh -E -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.headers -I/usr/local/include -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include /tmp/petsc-U9YCMv/config.headers/conftest.c Executing: tau_cc.sh -E -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.headers -I/usr/local/include -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include /tmp/petsc-U9YCMv/config.headers/conftest.c sh: # 1 "/tmp/petsc-U9YCMv/config.headers/conftest.c" # 1 "" # 1 "/tmp/petsc-U9YCMv/config.headers/conftest.c" # 1 "/tmp/petsc-U9YCMv/config.headers/confdefs.h" 1 # 2 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 # 1 "/tmp/petsc-U9YCMv/config.headers/conffix.h" 1 # 3 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 Possible ERROR while running preprocessor: /tmp/petsc-U9YCMv/config.headers/conftest.c:3:31: fatal error: valgrind/valgrind.h: No such file or directory compilation terminated. make: *** [all] Error 1 ret = 256 error message = {/tmp/petsc-U9YCMv/config.headers/conftest.c:3:31: fatal error: valgrind/valgrind.h: No such file or directory compilation terminated. make: *** [all] Error 1 } Source: #include "confdefs.h" #include "conffix.h" #include Popping language C Not checking for library in Package specific search directory VALGRIND: [] because no functions given to check for ================================================================================ TEST check from config.libraries(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/libraries.py:145) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:145) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for headers Package specific search directory VALGRIND: ['/usr/local/include', '/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include'] Pushing language C ================================================================================ TEST checkInclude from config.headers(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/headers.py:86) TESTING: checkInclude from config.headers(config/BuildSystem/config/headers.py:86) Checks if a particular include file can be found along particular include paths Checking for header files ['valgrind/valgrind.h'] in ['/usr/local/include', '/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include'] Checking include with compiler flags var CPPFLAGS ['/usr/local/include', '/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include'] sh: tau_cc.sh -E -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.headers -I/usr/local/include -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include /tmp/petsc-U9YCMv/config.headers/conftest.c Executing: tau_cc.sh -E -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.headers -I/usr/local/include -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include /tmp/petsc-U9YCMv/config.headers/conftest.c sh: # 1 "/tmp/petsc-U9YCMv/config.headers/conftest.c" # 1 "" # 1 "/tmp/petsc-U9YCMv/config.headers/conftest.c" # 1 "/tmp/petsc-U9YCMv/config.headers/confdefs.h" 1 # 2 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 # 1 "/tmp/petsc-U9YCMv/config.headers/conffix.h" 1 # 3 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 Possible ERROR while running preprocessor: /tmp/petsc-U9YCMv/config.headers/conftest.c:3:31: fatal error: valgrind/valgrind.h: No such file or directory compilation terminated. make: *** [all] Error 1 ret = 256 error message = {/tmp/petsc-U9YCMv/config.headers/conftest.c:3:31: fatal error: valgrind/valgrind.h: No such file or directory compilation terminated. make: *** [all] Error 1 } Source: #include "confdefs.h" #include "conffix.h" #include Popping language C Directory does not exist: /opt/local (while checking "Package specific search directory VALGRIND" for "[]") Directory does not exist: /opt/local (while checking "Package specific search directory VALGRIND" for "[]") sh: uname -s Executing: uname -s sh: Linux sh: uname -s Executing: uname -s sh: Linux =============================================================================== It appears you do not have valgrind installed on your system. We HIGHLY recommend you install it from www.valgrind.org Or install valgrind-devel or equivalent using your package manager. Then rerun ./configure =============================================================================== Popping language C ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.mpe(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/package.py:522) TESTING: alternateConfigureLibrary from PETSc.packages.mpe(config/BuildSystem/config/package.py:522) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.threadcomm(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/package.py:522) TESTING: alternateConfigureLibrary from PETSc.packages.threadcomm(config/BuildSystem/config/package.py:522) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.hwloc(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/package.py:522) TESTING: alternateConfigureLibrary from PETSc.packages.hwloc(config/BuildSystem/config/package.py:522) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.boost(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/package.py:522) TESTING: alternateConfigureLibrary from config.packages.boost(config/BuildSystem/config/package.py:522) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.Sieve(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/package.py:522) TESTING: alternateConfigureLibrary from PETSc.packages.Sieve(config/BuildSystem/config/package.py:522) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.Matlab(/home/hills/seska-hills/packages/petsc-3.4.2/config/PETSc/packages/Matlab.py:36) TESTING: alternateConfigureLibrary from PETSc.packages.Matlab(config/PETSc/packages/Matlab.py:36) ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.MatlabEngine(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/package.py:522) TESTING: alternateConfigureLibrary from PETSc.packages.MatlabEngine(config/BuildSystem/config/package.py:522) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.expat(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/package.py:522) TESTING: alternateConfigureLibrary from PETSc.packages.expat(config/BuildSystem/config/package.py:522) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.P3Dlib(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/package.py:522) TESTING: alternateConfigureLibrary from PETSc.packages.P3Dlib(config/BuildSystem/config/package.py:522) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.PARTY(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/package.py:522) TESTING: alternateConfigureLibrary from PETSc.packages.PARTY(config/BuildSystem/config/package.py:522) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.thrust(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/package.py:522) TESTING: alternateConfigureLibrary from config.packages.thrust(config/BuildSystem/config/package.py:522) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.cusp(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/package.py:522) TESTING: alternateConfigureLibrary from config.packages.cusp(config/BuildSystem/config/package.py:522) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.txpetscgpu(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/package.py:522) TESTING: alternateConfigureLibrary from PETSc.packages.txpetscgpu(config/BuildSystem/config/package.py:522) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.cuda(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/package.py:522) TESTING: alternateConfigureLibrary from PETSc.packages.cuda(config/BuildSystem/config/package.py:522) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.pami(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/package.py:522) TESTING: alternateConfigureLibrary from PETSc.packages.pami(config/BuildSystem/config/package.py:522) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.sprng(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/package.py:522) TESTING: alternateConfigureLibrary from PETSc.packages.sprng(config/BuildSystem/config/package.py:522) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.Suggar(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/package.py:522) TESTING: alternateConfigureLibrary from PETSc.packages.Suggar(config/BuildSystem/config/package.py:522) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.Numpy(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/package.py:522) TESTING: alternateConfigureLibrary from PETSc.packages.Numpy(config/BuildSystem/config/package.py:522) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.opengl(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/package.py:522) TESTING: alternateConfigureLibrary from PETSc.packages.opengl(config/BuildSystem/config/package.py:522) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.glut(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/package.py:522) TESTING: alternateConfigureLibrary from PETSc.packages.glut(config/BuildSystem/config/package.py:522) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.Chaco(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/package.py:522) TESTING: alternateConfigureLibrary from PETSc.packages.Chaco(config/BuildSystem/config/package.py:522) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.PTScotch(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/package.py:522) TESTING: alternateConfigureLibrary from PETSc.packages.PTScotch(config/BuildSystem/config/package.py:522) Called if --with-packagename=0; does nothing by default Checking for program /home/hills/seska/packages/pdt/x86_64/bin/cmake...not found Checking for program /home/hills/seska/packages/tau/x86_64/bin/cmake...not found Checking for program /home/hills/seska/packages/petsc/bin/cmake...not found Checking for program /home/hills/seska/packages/petsc/linux-gnu-cxx-opt/bin/cmake...not found Checking for program /home/hills/seska/packages/openmpi/bin/cmake...not found Checking for program /home/hills/bin/cmake...not found Checking for program /home/hills/seska/bin/cmake...not found Checking for program /home/hills/seska/packages/gid/cmake...not found Checking for program /home/hills/seska/packages/petsc/linux-gnu-cxx-opt/bin/cmake...not found Checking for program /usr/lib/lightdm/lightdm/cmake...not found Checking for program /usr/local/sbin/cmake...not found Checking for program /usr/local/bin/cmake...not found Checking for program /usr/sbin/cmake...not found Checking for program /usr/bin/cmake...found Defined make macro "CMAKE" to "/usr/bin/cmake" Defined make macro "CMAKE " to "/usr/bin/cmake" ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.metis(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/package.py:522) TESTING: alternateConfigureLibrary from PETSc.packages.metis(config/BuildSystem/config/package.py:522) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.parmetis(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/package.py:522) TESTING: alternateConfigureLibrary from PETSc.packages.parmetis(config/BuildSystem/config/package.py:522) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.java(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/package.py:522) TESTING: alternateConfigureLibrary from PETSc.packages.java(config/BuildSystem/config/package.py:522) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.ams(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/package.py:522) TESTING: alternateConfigureLibrary from PETSc.packages.ams(config/BuildSystem/config/package.py:522) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.yaml(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/package.py:522) TESTING: alternateConfigureLibrary from PETSc.packages.yaml(config/BuildSystem/config/package.py:522) Called if --with-packagename=0; does nothing by default Pushing language C ================================================================================ TEST configureLibrary from PETSc.packages.pthread(/home/hills/seska-hills/packages/petsc-3.4.2/config/PETSc/packages/pthread.py:27) TESTING: configureLibrary from PETSc.packages.pthread(config/PETSc/packages/pthread.py:27) Checks for pthread_barrier_t, cpu_set_t, and sys/sysctl.h ================================================================================== Checking for a functional pthread Checking for library in Package specific search directory PTHREAD: ['libpthread.a'] ================================================================================ TEST check from config.libraries(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/libraries.py:145) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:145) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for function pthread_create in library ['libpthread.a'] [] Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.libraries/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -o /tmp/petsc-U9YCMv/config.libraries/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char pthread_create(); int main() { pthread_create() ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -lpthread -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -lpthread -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -lpthread -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Defined "HAVE_LIBPTHREAD" to "1" Popping language C Checking for headers Package specific search directory PTHREAD: ['/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include'] Pushing language C ================================================================================ TEST checkInclude from config.headers(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/headers.py:86) TESTING: checkInclude from config.headers(config/BuildSystem/config/headers.py:86) Checks if a particular include file can be found along particular include paths Checking for header files ['pthread.h'] in ['/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include'] Checking include with compiler flags var CPPFLAGS ['/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include'] sh: tau_cc.sh -E -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.headers -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include /tmp/petsc-U9YCMv/config.headers/conftest.c Executing: tau_cc.sh -E -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.headers -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include /tmp/petsc-U9YCMv/config.headers/conftest.c sh: # 1 "/tmp/petsc-U9YCMv/config.headers/conftest.c" # 1 "" # 1 "/tmp/petsc-U9YCMv/config.headers/conftest.c" # 1 "/tmp/petsc-U9YCMv/config.headers/confdefs.h" 1 # 2 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 # 1 "/tmp/petsc-U9YCMv/config.headers/conffix.h" 1 # 3 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 # 1 "/usr/include/pthread.h" 1 3 4 # 21 "/usr/include/pthread.h" 3 4 # 1 "/usr/include/features.h" 1 3 4 # 341 "/usr/include/features.h" 3 4 # 1 "/usr/include/stdc-predef.h" 1 3 4 # 30 "/usr/include/stdc-predef.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/predefs.h" 1 3 4 # 31 "/usr/include/stdc-predef.h" 2 3 4 # 342 "/usr/include/features.h" 2 3 4 # 371 "/usr/include/features.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/sys/cdefs.h" 1 3 4 # 385 "/usr/include/x86_64-linux-gnu/sys/cdefs.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/wordsize.h" 1 3 4 # 386 "/usr/include/x86_64-linux-gnu/sys/cdefs.h" 2 3 4 # 372 "/usr/include/features.h" 2 3 4 # 395 "/usr/include/features.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/gnu/stubs.h" 1 3 4 # 10 "/usr/include/x86_64-linux-gnu/gnu/stubs.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/gnu/stubs-64.h" 1 3 4 # 11 "/usr/include/x86_64-linux-gnu/gnu/stubs.h" 2 3 4 # 396 "/usr/include/features.h" 2 3 4 # 22 "/usr/include/pthread.h" 2 3 4 # 1 "/usr/include/endian.h" 1 3 4 # 36 "/usr/include/endian.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/endian.h" 1 3 4 # 37 "/usr/include/endian.h" 2 3 4 # 60 "/usr/include/endian.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/byteswap.h" 1 3 4 # 27 "/usr/include/x86_64-linux-gnu/bits/byteswap.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/types.h" 1 3 4 # 27 "/usr/include/x86_64-linux-gnu/bits/types.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/wordsize.h" 1 3 4 # 28 "/usr/include/x86_64-linux-gnu/bits/types.h" 2 3 4 typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; # 130 "/usr/include/x86_64-linux-gnu/bits/types.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/typesizes.h" 1 3 4 # 131 "/usr/include/x86_64-linux-gnu/bits/types.h" 2 3 4 typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned long int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef long int __suseconds_t; typedef int __daddr_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __fsword_t; typedef long int __ssize_t; typedef long int __syscall_slong_t; typedef unsigned long int __syscall_ulong_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; # 28 "/usr/include/x86_64-linux-gnu/bits/byteswap.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/wordsize.h" 1 3 4 # 29 "/usr/include/x86_64-linux-gnu/bits/byteswap.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/byteswap-16.h" 1 3 4 # 36 "/usr/include/x86_64-linux-gnu/bits/byteswap.h" 2 3 4 # 44 "/usr/include/x86_64-linux-gnu/bits/byteswap.h" 3 4 static __inline unsigned int __bswap_32 (unsigned int __bsx) { return __builtin_bswap32 (__bsx); } # 108 "/usr/include/x86_64-linux-gnu/bits/byteswap.h" 3 4 static __inline __uint64_t __bswap_64 (__uint64_t __bsx) { return __builtin_bswap64 (__bsx); } # 61 "/usr/include/endian.h" 2 3 4 # 23 "/usr/include/pthread.h" 2 3 4 # 1 "/usr/include/sched.h" 1 3 4 # 29 "/usr/include/sched.h" 3 4 # 1 "/usr/lib/gcc/x86_64-linux-gnu/4.7/include/stddef.h" 1 3 4 # 213 "/usr/lib/gcc/x86_64-linux-gnu/4.7/include/stddef.h" 3 4 typedef long unsigned int size_t; # 30 "/usr/include/sched.h" 2 3 4 # 1 "/usr/include/time.h" 1 3 4 # 73 "/usr/include/time.h" 3 4 typedef __time_t time_t; # 120 "/usr/include/time.h" 3 4 struct timespec { __time_t tv_sec; __syscall_slong_t tv_nsec; }; # 34 "/usr/include/sched.h" 2 3 4 typedef __pid_t pid_t; # 1 "/usr/include/x86_64-linux-gnu/bits/sched.h" 1 3 4 # 73 "/usr/include/x86_64-linux-gnu/bits/sched.h" 3 4 struct sched_param { int __sched_priority; }; # 96 "/usr/include/x86_64-linux-gnu/bits/sched.h" 3 4 struct __sched_param { int __sched_priority; }; # 119 "/usr/include/x86_64-linux-gnu/bits/sched.h" 3 4 typedef unsigned long int __cpu_mask; typedef struct { __cpu_mask __bits[1024 / (8 * sizeof (__cpu_mask))]; } cpu_set_t; # 202 "/usr/include/x86_64-linux-gnu/bits/sched.h" 3 4 extern int __sched_cpucount (size_t __setsize, const cpu_set_t *__setp) __attribute__ ((__nothrow__ , __leaf__)); extern cpu_set_t *__sched_cpualloc (size_t __count) __attribute__ ((__nothrow__ , __leaf__)) ; extern void __sched_cpufree (cpu_set_t *__set) __attribute__ ((__nothrow__ , __leaf__)); # 43 "/usr/include/sched.h" 2 3 4 extern int sched_setparam (__pid_t __pid, const struct sched_param *__param) __attribute__ ((__nothrow__ , __leaf__)); extern int sched_getparam (__pid_t __pid, struct sched_param *__param) __attribute__ ((__nothrow__ , __leaf__)); extern int sched_setscheduler (__pid_t __pid, int __policy, const struct sched_param *__param) __attribute__ ((__nothrow__ , __leaf__)); extern int sched_getscheduler (__pid_t __pid) __attribute__ ((__nothrow__ , __leaf__)); extern int sched_yield (void) __attribute__ ((__nothrow__ , __leaf__)); extern int sched_get_priority_max (int __algorithm) __attribute__ ((__nothrow__ , __leaf__)); extern int sched_get_priority_min (int __algorithm) __attribute__ ((__nothrow__ , __leaf__)); extern int sched_rr_get_interval (__pid_t __pid, struct timespec *__t) __attribute__ ((__nothrow__ , __leaf__)); # 125 "/usr/include/sched.h" 3 4 # 24 "/usr/include/pthread.h" 2 3 4 # 1 "/usr/include/time.h" 1 3 4 # 29 "/usr/include/time.h" 3 4 # 1 "/usr/lib/gcc/x86_64-linux-gnu/4.7/include/stddef.h" 1 3 4 # 38 "/usr/include/time.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/time.h" 1 3 4 # 42 "/usr/include/time.h" 2 3 4 # 57 "/usr/include/time.h" 3 4 typedef __clock_t clock_t; # 91 "/usr/include/time.h" 3 4 typedef __clockid_t clockid_t; # 103 "/usr/include/time.h" 3 4 typedef __timer_t timer_t; # 131 "/usr/include/time.h" 3 4 struct tm { int tm_sec; int tm_min; int tm_hour; int tm_mday; int tm_mon; int tm_year; int tm_wday; int tm_yday; int tm_isdst; long int tm_gmtoff; const char *tm_zone; }; struct itimerspec { struct timespec it_interval; struct timespec it_value; }; struct sigevent; # 186 "/usr/include/time.h" 3 4 extern clock_t clock (void) __attribute__ ((__nothrow__ , __leaf__)); extern time_t time (time_t *__timer) __attribute__ ((__nothrow__ , __leaf__)); extern double difftime (time_t __time1, time_t __time0) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); extern time_t mktime (struct tm *__tp) __attribute__ ((__nothrow__ , __leaf__)); extern size_t strftime (char *__restrict __s, size_t __maxsize, const char *__restrict __format, const struct tm *__restrict __tp) __attribute__ ((__nothrow__ , __leaf__)); # 221 "/usr/include/time.h" 3 4 # 1 "/usr/include/xlocale.h" 1 3 4 # 27 "/usr/include/xlocale.h" 3 4 typedef struct __locale_struct { struct __locale_data *__locales[13]; const unsigned short int *__ctype_b; const int *__ctype_tolower; const int *__ctype_toupper; const char *__names[13]; } *__locale_t; typedef __locale_t locale_t; # 222 "/usr/include/time.h" 2 3 4 extern size_t strftime_l (char *__restrict __s, size_t __maxsize, const char *__restrict __format, const struct tm *__restrict __tp, __locale_t __loc) __attribute__ ((__nothrow__ , __leaf__)); # 236 "/usr/include/time.h" 3 4 extern struct tm *gmtime (const time_t *__timer) __attribute__ ((__nothrow__ , __leaf__)); extern struct tm *localtime (const time_t *__timer) __attribute__ ((__nothrow__ , __leaf__)); extern struct tm *gmtime_r (const time_t *__restrict __timer, struct tm *__restrict __tp) __attribute__ ((__nothrow__ , __leaf__)); extern struct tm *localtime_r (const time_t *__restrict __timer, struct tm *__restrict __tp) __attribute__ ((__nothrow__ , __leaf__)); extern char *asctime (const struct tm *__tp) __attribute__ ((__nothrow__ , __leaf__)); extern char *ctime (const time_t *__timer) __attribute__ ((__nothrow__ , __leaf__)); extern char *asctime_r (const struct tm *__restrict __tp, char *__restrict __buf) __attribute__ ((__nothrow__ , __leaf__)); extern char *ctime_r (const time_t *__restrict __timer, char *__restrict __buf) __attribute__ ((__nothrow__ , __leaf__)); extern char *__tzname[2]; extern int __daylight; extern long int __timezone; extern char *tzname[2]; extern void tzset (void) __attribute__ ((__nothrow__ , __leaf__)); extern int daylight; extern long int timezone; extern int stime (const time_t *__when) __attribute__ ((__nothrow__ , __leaf__)); # 319 "/usr/include/time.h" 3 4 extern time_t timegm (struct tm *__tp) __attribute__ ((__nothrow__ , __leaf__)); extern time_t timelocal (struct tm *__tp) __attribute__ ((__nothrow__ , __leaf__)); extern int dysize (int __year) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); # 334 "/usr/include/time.h" 3 4 extern int nanosleep (const struct timespec *__requested_time, struct timespec *__remaining); extern int clock_getres (clockid_t __clock_id, struct timespec *__res) __attribute__ ((__nothrow__ , __leaf__)); extern int clock_gettime (clockid_t __clock_id, struct timespec *__tp) __attribute__ ((__nothrow__ , __leaf__)); extern int clock_settime (clockid_t __clock_id, const struct timespec *__tp) __attribute__ ((__nothrow__ , __leaf__)); extern int clock_nanosleep (clockid_t __clock_id, int __flags, const struct timespec *__req, struct timespec *__rem); extern int clock_getcpuclockid (pid_t __pid, clockid_t *__clock_id) __attribute__ ((__nothrow__ , __leaf__)); extern int timer_create (clockid_t __clock_id, struct sigevent *__restrict __evp, timer_t *__restrict __timerid) __attribute__ ((__nothrow__ , __leaf__)); extern int timer_delete (timer_t __timerid) __attribute__ ((__nothrow__ , __leaf__)); extern int timer_settime (timer_t __timerid, int __flags, const struct itimerspec *__restrict __value, struct itimerspec *__restrict __ovalue) __attribute__ ((__nothrow__ , __leaf__)); extern int timer_gettime (timer_t __timerid, struct itimerspec *__value) __attribute__ ((__nothrow__ , __leaf__)); extern int timer_getoverrun (timer_t __timerid) __attribute__ ((__nothrow__ , __leaf__)); # 430 "/usr/include/time.h" 3 4 # 25 "/usr/include/pthread.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/pthreadtypes.h" 1 3 4 # 21 "/usr/include/x86_64-linux-gnu/bits/pthreadtypes.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/wordsize.h" 1 3 4 # 22 "/usr/include/x86_64-linux-gnu/bits/pthreadtypes.h" 2 3 4 # 60 "/usr/include/x86_64-linux-gnu/bits/pthreadtypes.h" 3 4 typedef unsigned long int pthread_t; union pthread_attr_t { char __size[56]; long int __align; }; typedef union pthread_attr_t pthread_attr_t; typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; # 90 "/usr/include/x86_64-linux-gnu/bits/pthreadtypes.h" 3 4 typedef union { struct __pthread_mutex_s { int __lock; unsigned int __count; int __owner; unsigned int __nusers; int __kind; int __spins; __pthread_list_t __list; # 115 "/usr/include/x86_64-linux-gnu/bits/pthreadtypes.h" 3 4 } __data; char __size[40]; long int __align; } pthread_mutex_t; typedef union { char __size[4]; int __align; } pthread_mutexattr_t; typedef union { struct { int __lock; unsigned int __futex; __extension__ unsigned long long int __total_seq; __extension__ unsigned long long int __wakeup_seq; __extension__ unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; __extension__ long long int __align; } pthread_cond_t; typedef union { char __size[4]; int __align; } pthread_condattr_t; typedef unsigned int pthread_key_t; typedef int pthread_once_t; typedef union { struct { int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; unsigned int __flags; } __data; # 202 "/usr/include/x86_64-linux-gnu/bits/pthreadtypes.h" 3 4 char __size[56]; long int __align; } pthread_rwlock_t; typedef union { char __size[8]; long int __align; } pthread_rwlockattr_t; typedef volatile int pthread_spinlock_t; typedef union { char __size[32]; long int __align; } pthread_barrier_t; typedef union { char __size[4]; int __align; } pthread_barrierattr_t; # 27 "/usr/include/pthread.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/setjmp.h" 1 3 4 # 26 "/usr/include/x86_64-linux-gnu/bits/setjmp.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/wordsize.h" 1 3 4 # 27 "/usr/include/x86_64-linux-gnu/bits/setjmp.h" 2 3 4 typedef long int __jmp_buf[8]; # 28 "/usr/include/pthread.h" 2 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/wordsize.h" 1 3 4 # 29 "/usr/include/pthread.h" 2 3 4 enum { PTHREAD_CREATE_JOINABLE, PTHREAD_CREATE_DETACHED }; enum { PTHREAD_MUTEX_TIMED_NP, PTHREAD_MUTEX_RECURSIVE_NP, PTHREAD_MUTEX_ERRORCHECK_NP, PTHREAD_MUTEX_ADAPTIVE_NP , PTHREAD_MUTEX_NORMAL = PTHREAD_MUTEX_TIMED_NP, PTHREAD_MUTEX_RECURSIVE = PTHREAD_MUTEX_RECURSIVE_NP, PTHREAD_MUTEX_ERRORCHECK = PTHREAD_MUTEX_ERRORCHECK_NP, PTHREAD_MUTEX_DEFAULT = PTHREAD_MUTEX_NORMAL }; enum { PTHREAD_MUTEX_STALLED, PTHREAD_MUTEX_STALLED_NP = PTHREAD_MUTEX_STALLED, PTHREAD_MUTEX_ROBUST, PTHREAD_MUTEX_ROBUST_NP = PTHREAD_MUTEX_ROBUST }; enum { PTHREAD_PRIO_NONE, PTHREAD_PRIO_INHERIT, PTHREAD_PRIO_PROTECT }; # 113 "/usr/include/pthread.h" 3 4 enum { PTHREAD_RWLOCK_PREFER_READER_NP, PTHREAD_RWLOCK_PREFER_WRITER_NP, PTHREAD_RWLOCK_PREFER_WRITER_NONRECURSIVE_NP, PTHREAD_RWLOCK_DEFAULT_NP = PTHREAD_RWLOCK_PREFER_READER_NP }; # 154 "/usr/include/pthread.h" 3 4 enum { PTHREAD_INHERIT_SCHED, PTHREAD_EXPLICIT_SCHED }; enum { PTHREAD_SCOPE_SYSTEM, PTHREAD_SCOPE_PROCESS }; enum { PTHREAD_PROCESS_PRIVATE, PTHREAD_PROCESS_SHARED }; # 189 "/usr/include/pthread.h" 3 4 struct _pthread_cleanup_buffer { void (*__routine) (void *); void *__arg; int __canceltype; struct _pthread_cleanup_buffer *__prev; }; enum { PTHREAD_CANCEL_ENABLE, PTHREAD_CANCEL_DISABLE }; enum { PTHREAD_CANCEL_DEFERRED, PTHREAD_CANCEL_ASYNCHRONOUS }; # 227 "/usr/include/pthread.h" 3 4 extern int pthread_create (pthread_t *__restrict __newthread, const pthread_attr_t *__restrict __attr, void *(*__start_routine) (void *), void *__restrict __arg) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 3))); extern void pthread_exit (void *__retval) __attribute__ ((__noreturn__)); extern int pthread_join (pthread_t __th, void **__thread_return); # 270 "/usr/include/pthread.h" 3 4 extern int pthread_detach (pthread_t __th) __attribute__ ((__nothrow__ , __leaf__)); extern pthread_t pthread_self (void) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); extern int pthread_equal (pthread_t __thread1, pthread_t __thread2) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__const__)); extern int pthread_attr_init (pthread_attr_t *__attr) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern int pthread_attr_destroy (pthread_attr_t *__attr) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern int pthread_attr_getdetachstate (const pthread_attr_t *__attr, int *__detachstate) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))); extern int pthread_attr_setdetachstate (pthread_attr_t *__attr, int __detachstate) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern int pthread_attr_getguardsize (const pthread_attr_t *__attr, size_t *__guardsize) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))); extern int pthread_attr_setguardsize (pthread_attr_t *__attr, size_t __guardsize) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern int pthread_attr_getschedparam (const pthread_attr_t *__restrict __attr, struct sched_param *__restrict __param) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))); extern int pthread_attr_setschedparam (pthread_attr_t *__restrict __attr, const struct sched_param *__restrict __param) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))); extern int pthread_attr_getschedpolicy (const pthread_attr_t *__restrict __attr, int *__restrict __policy) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))); extern int pthread_attr_setschedpolicy (pthread_attr_t *__attr, int __policy) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern int pthread_attr_getinheritsched (const pthread_attr_t *__restrict __attr, int *__restrict __inherit) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))); extern int pthread_attr_setinheritsched (pthread_attr_t *__attr, int __inherit) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern int pthread_attr_getscope (const pthread_attr_t *__restrict __attr, int *__restrict __scope) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))); extern int pthread_attr_setscope (pthread_attr_t *__attr, int __scope) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern int pthread_attr_getstackaddr (const pthread_attr_t *__restrict __attr, void **__restrict __stackaddr) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))) __attribute__ ((__deprecated__)); extern int pthread_attr_setstackaddr (pthread_attr_t *__attr, void *__stackaddr) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))) __attribute__ ((__deprecated__)); extern int pthread_attr_getstacksize (const pthread_attr_t *__restrict __attr, size_t *__restrict __stacksize) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))); extern int pthread_attr_setstacksize (pthread_attr_t *__attr, size_t __stacksize) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern int pthread_attr_getstack (const pthread_attr_t *__restrict __attr, void **__restrict __stackaddr, size_t *__restrict __stacksize) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2, 3))); extern int pthread_attr_setstack (pthread_attr_t *__attr, void *__stackaddr, size_t __stacksize) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); # 420 "/usr/include/pthread.h" 3 4 extern int pthread_setschedparam (pthread_t __target_thread, int __policy, const struct sched_param *__param) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (3))); extern int pthread_getschedparam (pthread_t __target_thread, int *__restrict __policy, struct sched_param *__restrict __param) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (2, 3))); extern int pthread_setschedprio (pthread_t __target_thread, int __prio) __attribute__ ((__nothrow__ , __leaf__)); # 485 "/usr/include/pthread.h" 3 4 extern int pthread_once (pthread_once_t *__once_control, void (*__init_routine) (void)) __attribute__ ((__nonnull__ (1, 2))); # 497 "/usr/include/pthread.h" 3 4 extern int pthread_setcancelstate (int __state, int *__oldstate); extern int pthread_setcanceltype (int __type, int *__oldtype); extern int pthread_cancel (pthread_t __th); extern void pthread_testcancel (void); typedef struct { struct { __jmp_buf __cancel_jmp_buf; int __mask_was_saved; } __cancel_jmp_buf[1]; void *__pad[4]; } __pthread_unwind_buf_t __attribute__ ((__aligned__)); # 531 "/usr/include/pthread.h" 3 4 struct __pthread_cleanup_frame { void (*__cancel_routine) (void *); void *__cancel_arg; int __do_it; int __cancel_type; }; # 671 "/usr/include/pthread.h" 3 4 extern void __pthread_register_cancel (__pthread_unwind_buf_t *__buf) ; # 683 "/usr/include/pthread.h" 3 4 extern void __pthread_unregister_cancel (__pthread_unwind_buf_t *__buf) ; # 724 "/usr/include/pthread.h" 3 4 extern void __pthread_unwind_next (__pthread_unwind_buf_t *__buf) __attribute__ ((__noreturn__)) __attribute__ ((__weak__)) ; struct __jmp_buf_tag; extern int __sigsetjmp (struct __jmp_buf_tag *__env, int __savemask) __attribute__ ((__nothrow__)); extern int pthread_mutex_init (pthread_mutex_t *__mutex, const pthread_mutexattr_t *__mutexattr) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern int pthread_mutex_destroy (pthread_mutex_t *__mutex) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern int pthread_mutex_trylock (pthread_mutex_t *__mutex) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_mutex_lock (pthread_mutex_t *__mutex) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_mutex_timedlock (pthread_mutex_t *__restrict __mutex, const struct timespec *__restrict __abstime) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int pthread_mutex_unlock (pthread_mutex_t *__mutex) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_mutex_getprioceiling (const pthread_mutex_t * __restrict __mutex, int *__restrict __prioceiling) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))); extern int pthread_mutex_setprioceiling (pthread_mutex_t *__restrict __mutex, int __prioceiling, int *__restrict __old_ceiling) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 3))); extern int pthread_mutex_consistent (pthread_mutex_t *__mutex) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); # 797 "/usr/include/pthread.h" 3 4 extern int pthread_mutexattr_init (pthread_mutexattr_t *__attr) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern int pthread_mutexattr_destroy (pthread_mutexattr_t *__attr) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern int pthread_mutexattr_getpshared (const pthread_mutexattr_t * __restrict __attr, int *__restrict __pshared) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))); extern int pthread_mutexattr_setpshared (pthread_mutexattr_t *__attr, int __pshared) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern int pthread_mutexattr_gettype (const pthread_mutexattr_t *__restrict __attr, int *__restrict __kind) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))); extern int pthread_mutexattr_settype (pthread_mutexattr_t *__attr, int __kind) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern int pthread_mutexattr_getprotocol (const pthread_mutexattr_t * __restrict __attr, int *__restrict __protocol) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))); extern int pthread_mutexattr_setprotocol (pthread_mutexattr_t *__attr, int __protocol) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern int pthread_mutexattr_getprioceiling (const pthread_mutexattr_t * __restrict __attr, int *__restrict __prioceiling) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))); extern int pthread_mutexattr_setprioceiling (pthread_mutexattr_t *__attr, int __prioceiling) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern int pthread_mutexattr_getrobust (const pthread_mutexattr_t *__attr, int *__robustness) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))); extern int pthread_mutexattr_setrobust (pthread_mutexattr_t *__attr, int __robustness) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); # 879 "/usr/include/pthread.h" 3 4 extern int pthread_rwlock_init (pthread_rwlock_t *__restrict __rwlock, const pthread_rwlockattr_t *__restrict __attr) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern int pthread_rwlock_destroy (pthread_rwlock_t *__rwlock) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern int pthread_rwlock_rdlock (pthread_rwlock_t *__rwlock) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_rwlock_tryrdlock (pthread_rwlock_t *__rwlock) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_rwlock_timedrdlock (pthread_rwlock_t *__restrict __rwlock, const struct timespec *__restrict __abstime) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int pthread_rwlock_wrlock (pthread_rwlock_t *__rwlock) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_rwlock_trywrlock (pthread_rwlock_t *__rwlock) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_rwlock_timedwrlock (pthread_rwlock_t *__restrict __rwlock, const struct timespec *__restrict __abstime) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int pthread_rwlock_unlock (pthread_rwlock_t *__rwlock) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_rwlockattr_init (pthread_rwlockattr_t *__attr) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern int pthread_rwlockattr_destroy (pthread_rwlockattr_t *__attr) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern int pthread_rwlockattr_getpshared (const pthread_rwlockattr_t * __restrict __attr, int *__restrict __pshared) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))); extern int pthread_rwlockattr_setpshared (pthread_rwlockattr_t *__attr, int __pshared) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern int pthread_rwlockattr_getkind_np (const pthread_rwlockattr_t * __restrict __attr, int *__restrict __pref) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))); extern int pthread_rwlockattr_setkind_np (pthread_rwlockattr_t *__attr, int __pref) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern int pthread_cond_init (pthread_cond_t *__restrict __cond, const pthread_condattr_t *__restrict __cond_attr) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern int pthread_cond_destroy (pthread_cond_t *__cond) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern int pthread_cond_signal (pthread_cond_t *__cond) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_cond_broadcast (pthread_cond_t *__cond) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_cond_wait (pthread_cond_t *__restrict __cond, pthread_mutex_t *__restrict __mutex) __attribute__ ((__nonnull__ (1, 2))); # 991 "/usr/include/pthread.h" 3 4 extern int pthread_cond_timedwait (pthread_cond_t *__restrict __cond, pthread_mutex_t *__restrict __mutex, const struct timespec *__restrict __abstime) __attribute__ ((__nonnull__ (1, 2, 3))); extern int pthread_condattr_init (pthread_condattr_t *__attr) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern int pthread_condattr_destroy (pthread_condattr_t *__attr) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern int pthread_condattr_getpshared (const pthread_condattr_t * __restrict __attr, int *__restrict __pshared) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))); extern int pthread_condattr_setpshared (pthread_condattr_t *__attr, int __pshared) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern int pthread_condattr_getclock (const pthread_condattr_t * __restrict __attr, __clockid_t *__restrict __clock_id) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))); extern int pthread_condattr_setclock (pthread_condattr_t *__attr, __clockid_t __clock_id) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); # 1035 "/usr/include/pthread.h" 3 4 extern int pthread_spin_init (pthread_spinlock_t *__lock, int __pshared) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern int pthread_spin_destroy (pthread_spinlock_t *__lock) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern int pthread_spin_lock (pthread_spinlock_t *__lock) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_spin_trylock (pthread_spinlock_t *__lock) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_spin_unlock (pthread_spinlock_t *__lock) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_barrier_init (pthread_barrier_t *__restrict __barrier, const pthread_barrierattr_t *__restrict __attr, unsigned int __count) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern int pthread_barrier_destroy (pthread_barrier_t *__barrier) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern int pthread_barrier_wait (pthread_barrier_t *__barrier) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_barrierattr_init (pthread_barrierattr_t *__attr) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern int pthread_barrierattr_destroy (pthread_barrierattr_t *__attr) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern int pthread_barrierattr_getpshared (const pthread_barrierattr_t * __restrict __attr, int *__restrict __pshared) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1, 2))); extern int pthread_barrierattr_setpshared (pthread_barrierattr_t *__attr, int __pshared) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); # 1102 "/usr/include/pthread.h" 3 4 extern int pthread_key_create (pthread_key_t *__key, void (*__destr_function) (void *)) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (1))); extern int pthread_key_delete (pthread_key_t __key) __attribute__ ((__nothrow__ , __leaf__)); extern void *pthread_getspecific (pthread_key_t __key) __attribute__ ((__nothrow__ , __leaf__)); extern int pthread_setspecific (pthread_key_t __key, const void *__pointer) __attribute__ ((__nothrow__ , __leaf__)) ; extern int pthread_getcpuclockid (pthread_t __thread_id, __clockid_t *__clock_id) __attribute__ ((__nothrow__ , __leaf__)) __attribute__ ((__nonnull__ (2))); # 1136 "/usr/include/pthread.h" 3 4 extern int pthread_atfork (void (*__prepare) (void), void (*__parent) (void), void (*__child) (void)) __attribute__ ((__nothrow__ , __leaf__)); # 1150 "/usr/include/pthread.h" 3 4 # 3 "/tmp/petsc-U9YCMv/config.headers/conftest.c" 2 Found header files ['pthread.h'] in ['/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include'] Popping language C All intermediate test results are stored in /tmp/petsc-U9YCMv/PETSc.packages.pthread sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/PETSc.packages.pthread/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/PETSc.packages.pthread/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/PETSc.packages.pthread/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/PETSc.packages.pthread/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/PETSc.packages.pthread/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.packages.pthread Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/PETSc.packages.pthread/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -o /tmp/petsc-U9YCMv/PETSc.packages.pthread/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { pthread_barrier_t *a; ; return 0; } Defined "HAVE_PTHREAD_BARRIER_T" to "1" sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/PETSc.packages.pthread/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -fPIC -g /tmp/petsc-U9YCMv/PETSc.packages.pthread/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/PETSc.packages.pthread/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -fPIC -g /tmp/petsc-U9YCMv/PETSc.packages.pthread/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/PETSc.packages.pthread/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.packages.pthread Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/PETSc.packages.pthread/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -o /tmp/petsc-U9YCMv/PETSc.packages.pthread/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { cpu_set_t *a; ; return 0; } Defined "HAVE_SCHED_CPU_SET_T" to "1" sh: tau_cc.sh -E -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.headers /tmp/petsc-U9YCMv/PETSc.packages.pthread/conftest.c Executing: tau_cc.sh -E -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.headers /tmp/petsc-U9YCMv/PETSc.packages.pthread/conftest.c sh: # 1 "/tmp/petsc-U9YCMv/PETSc.packages.pthread/conftest.c" # 1 "" # 1 "/tmp/petsc-U9YCMv/PETSc.packages.pthread/conftest.c" # 1 "/tmp/petsc-U9YCMv/PETSc.packages.pthread/confdefs.h" 1 # 2 "/tmp/petsc-U9YCMv/PETSc.packages.pthread/conftest.c" 2 # 1 "/tmp/petsc-U9YCMv/PETSc.packages.pthread/conffix.h" 1 # 3 "/tmp/petsc-U9YCMv/PETSc.packages.pthread/conftest.c" 2 # 1 "/usr/include/x86_64-linux-gnu/sys/sysctl.h" 1 3 4 # 21 "/usr/include/x86_64-linux-gnu/sys/sysctl.h" 3 4 # 1 "/usr/include/features.h" 1 3 4 # 341 "/usr/include/features.h" 3 4 # 1 "/usr/include/stdc-predef.h" 1 3 4 # 30 "/usr/include/stdc-predef.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/predefs.h" 1 3 4 # 31 "/usr/include/stdc-predef.h" 2 3 4 # 342 "/usr/include/features.h" 2 3 4 # 371 "/usr/include/features.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/sys/cdefs.h" 1 3 4 # 385 "/usr/include/x86_64-linux-gnu/sys/cdefs.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/wordsize.h" 1 3 4 # 386 "/usr/include/x86_64-linux-gnu/sys/cdefs.h" 2 3 4 # 372 "/usr/include/features.h" 2 3 4 # 395 "/usr/include/features.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/gnu/stubs.h" 1 3 4 # 10 "/usr/include/x86_64-linux-gnu/gnu/stubs.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/gnu/stubs-64.h" 1 3 4 # 11 "/usr/include/x86_64-linux-gnu/gnu/stubs.h" 2 3 4 # 396 "/usr/include/features.h" 2 3 4 # 22 "/usr/include/x86_64-linux-gnu/sys/sysctl.h" 2 3 4 # 1 "/usr/lib/gcc/x86_64-linux-gnu/4.7/include/stddef.h" 1 3 4 # 213 "/usr/lib/gcc/x86_64-linux-gnu/4.7/include/stddef.h" 3 4 typedef long unsigned int size_t; # 24 "/usr/include/x86_64-linux-gnu/sys/sysctl.h" 2 3 4 # 43 "/usr/include/x86_64-linux-gnu/sys/sysctl.h" 3 4 # 1 "/usr/include/linux/sysctl.h" 1 3 4 # 25 "/usr/include/linux/sysctl.h" 3 4 # 1 "/usr/include/linux/kernel.h" 1 3 4 # 26 "/usr/include/linux/sysctl.h" 2 3 4 # 1 "/usr/include/linux/types.h" 1 3 4 # 27 "/usr/include/linux/sysctl.h" 2 3 4 struct completion; struct __sysctl_args { int *name; int nlen; void *oldval; size_t *oldlenp; void *newval; size_t newlen; unsigned long __unused[4]; }; enum { CTL_KERN=1, CTL_VM=2, CTL_NET=3, CTL_PROC=4, CTL_FS=5, CTL_DEBUG=6, CTL_DEV=7, CTL_BUS=8, CTL_ABI=9, CTL_CPU=10, CTL_ARLAN=254, CTL_S390DBF=5677, CTL_SUNRPC=7249, CTL_PM=9899, CTL_FRV=9898, }; enum { CTL_BUS_ISA=1 }; enum { INOTIFY_MAX_USER_INSTANCES=1, INOTIFY_MAX_USER_WATCHES=2, INOTIFY_MAX_QUEUED_EVENTS=3 }; enum { KERN_OSTYPE=1, KERN_OSRELEASE=2, KERN_OSREV=3, KERN_VERSION=4, KERN_SECUREMASK=5, KERN_PROF=6, KERN_NODENAME=7, KERN_DOMAINNAME=8, KERN_PANIC=15, KERN_REALROOTDEV=16, KERN_SPARC_REBOOT=21, KERN_CTLALTDEL=22, KERN_PRINTK=23, KERN_NAMETRANS=24, KERN_PPC_HTABRECLAIM=25, KERN_PPC_ZEROPAGED=26, KERN_PPC_POWERSAVE_NAP=27, KERN_MODPROBE=28, KERN_SG_BIG_BUFF=29, KERN_ACCT=30, KERN_PPC_L2CR=31, KERN_RTSIGNR=32, KERN_RTSIGMAX=33, KERN_SHMMAX=34, KERN_MSGMAX=35, KERN_MSGMNB=36, KERN_MSGPOOL=37, KERN_SYSRQ=38, KERN_MAX_THREADS=39, KERN_RANDOM=40, KERN_SHMALL=41, KERN_MSGMNI=42, KERN_SEM=43, KERN_SPARC_STOP_A=44, KERN_SHMMNI=45, KERN_OVERFLOWUID=46, KERN_OVERFLOWGID=47, KERN_SHMPATH=48, KERN_HOTPLUG=49, KERN_IEEE_EMULATION_WARNINGS=50, KERN_S390_USER_DEBUG_LOGGING=51, KERN_CORE_USES_PID=52, KERN_TAINTED=53, KERN_CADPID=54, KERN_PIDMAX=55, KERN_CORE_PATTERN=56, KERN_PANIC_ON_OOPS=57, KERN_HPPA_PWRSW=58, KERN_HPPA_UNALIGNED=59, KERN_PRINTK_RATELIMIT=60, KERN_PRINTK_RATELIMIT_BURST=61, KERN_PTY=62, KERN_NGROUPS_MAX=63, KERN_SPARC_SCONS_PWROFF=64, KERN_HZ_TIMER=65, KERN_UNKNOWN_NMI_PANIC=66, KERN_BOOTLOADER_TYPE=67, KERN_RANDOMIZE=68, KERN_SETUID_DUMPABLE=69, KERN_SPIN_RETRY=70, KERN_ACPI_VIDEO_FLAGS=71, KERN_IA64_UNALIGNED=72, KERN_COMPAT_LOG=73, KERN_MAX_LOCK_DEPTH=74, KERN_NMI_WATCHDOG=75, KERN_PANIC_ON_NMI=76, }; enum { VM_UNUSED1=1, VM_UNUSED2=2, VM_UNUSED3=3, VM_UNUSED4=4, VM_OVERCOMMIT_MEMORY=5, VM_UNUSED5=6, VM_UNUSED7=7, VM_UNUSED8=8, VM_UNUSED9=9, VM_PAGE_CLUSTER=10, VM_DIRTY_BACKGROUND=11, VM_DIRTY_RATIO=12, VM_DIRTY_WB_CS=13, VM_DIRTY_EXPIRE_CS=14, VM_NR_PDFLUSH_THREADS=15, VM_OVERCOMMIT_RATIO=16, VM_PAGEBUF=17, VM_HUGETLB_PAGES=18, VM_SWAPPINESS=19, VM_LOWMEM_RESERVE_RATIO=20, VM_MIN_FREE_KBYTES=21, VM_MAX_MAP_COUNT=22, VM_LAPTOP_MODE=23, VM_BLOCK_DUMP=24, VM_HUGETLB_GROUP=25, VM_VFS_CACHE_PRESSURE=26, VM_LEGACY_VA_LAYOUT=27, VM_SWAP_TOKEN_TIMEOUT=28, VM_DROP_PAGECACHE=29, VM_PERCPU_PAGELIST_FRACTION=30, VM_ZONE_RECLAIM_MODE=31, VM_MIN_UNMAPPED=32, VM_PANIC_ON_OOM=33, VM_VDSO_ENABLED=34, VM_MIN_SLAB=35, }; enum { NET_CORE=1, NET_ETHER=2, NET_802=3, NET_UNIX=4, NET_IPV4=5, NET_IPX=6, NET_ATALK=7, NET_NETROM=8, NET_AX25=9, NET_BRIDGE=10, NET_ROSE=11, NET_IPV6=12, NET_X25=13, NET_TR=14, NET_DECNET=15, NET_ECONET=16, NET_SCTP=17, NET_LLC=18, NET_NETFILTER=19, NET_DCCP=20, NET_IRDA=412, }; enum { RANDOM_POOLSIZE=1, RANDOM_ENTROPY_COUNT=2, RANDOM_READ_THRESH=3, RANDOM_WRITE_THRESH=4, RANDOM_BOOT_ID=5, RANDOM_UUID=6 }; enum { PTY_MAX=1, PTY_NR=2 }; enum { BUS_ISA_MEM_BASE=1, BUS_ISA_PORT_BASE=2, BUS_ISA_PORT_SHIFT=3 }; enum { NET_CORE_WMEM_MAX=1, NET_CORE_RMEM_MAX=2, NET_CORE_WMEM_DEFAULT=3, NET_CORE_RMEM_DEFAULT=4, NET_CORE_MAX_BACKLOG=6, NET_CORE_FASTROUTE=7, NET_CORE_MSG_COST=8, NET_CORE_MSG_BURST=9, NET_CORE_OPTMEM_MAX=10, NET_CORE_HOT_LIST_LENGTH=11, NET_CORE_DIVERT_VERSION=12, NET_CORE_NO_CONG_THRESH=13, NET_CORE_NO_CONG=14, NET_CORE_LO_CONG=15, NET_CORE_MOD_CONG=16, NET_CORE_DEV_WEIGHT=17, NET_CORE_SOMAXCONN=18, NET_CORE_BUDGET=19, NET_CORE_AEVENT_ETIME=20, NET_CORE_AEVENT_RSEQTH=21, NET_CORE_WARNINGS=22, }; enum { NET_UNIX_DESTROY_DELAY=1, NET_UNIX_DELETE_DELAY=2, NET_UNIX_MAX_DGRAM_QLEN=3, }; enum { NET_NF_CONNTRACK_MAX=1, NET_NF_CONNTRACK_TCP_TIMEOUT_SYN_SENT=2, NET_NF_CONNTRACK_TCP_TIMEOUT_SYN_RECV=3, NET_NF_CONNTRACK_TCP_TIMEOUT_ESTABLISHED=4, NET_NF_CONNTRACK_TCP_TIMEOUT_FIN_WAIT=5, NET_NF_CONNTRACK_TCP_TIMEOUT_CLOSE_WAIT=6, NET_NF_CONNTRACK_TCP_TIMEOUT_LAST_ACK=7, NET_NF_CONNTRACK_TCP_TIMEOUT_TIME_WAIT=8, NET_NF_CONNTRACK_TCP_TIMEOUT_CLOSE=9, NET_NF_CONNTRACK_UDP_TIMEOUT=10, NET_NF_CONNTRACK_UDP_TIMEOUT_STREAM=11, NET_NF_CONNTRACK_ICMP_TIMEOUT=12, NET_NF_CONNTRACK_GENERIC_TIMEOUT=13, NET_NF_CONNTRACK_BUCKETS=14, NET_NF_CONNTRACK_LOG_INVALID=15, NET_NF_CONNTRACK_TCP_TIMEOUT_MAX_RETRANS=16, NET_NF_CONNTRACK_TCP_LOOSE=17, NET_NF_CONNTRACK_TCP_BE_LIBERAL=18, NET_NF_CONNTRACK_TCP_MAX_RETRANS=19, NET_NF_CONNTRACK_SCTP_TIMEOUT_CLOSED=20, NET_NF_CONNTRACK_SCTP_TIMEOUT_COOKIE_WAIT=21, NET_NF_CONNTRACK_SCTP_TIMEOUT_COOKIE_ECHOED=22, NET_NF_CONNTRACK_SCTP_TIMEOUT_ESTABLISHED=23, NET_NF_CONNTRACK_SCTP_TIMEOUT_SHUTDOWN_SENT=24, NET_NF_CONNTRACK_SCTP_TIMEOUT_SHUTDOWN_RECD=25, NET_NF_CONNTRACK_SCTP_TIMEOUT_SHUTDOWN_ACK_SENT=26, NET_NF_CONNTRACK_COUNT=27, NET_NF_CONNTRACK_ICMPV6_TIMEOUT=28, NET_NF_CONNTRACK_FRAG6_TIMEOUT=29, NET_NF_CONNTRACK_FRAG6_LOW_THRESH=30, NET_NF_CONNTRACK_FRAG6_HIGH_THRESH=31, NET_NF_CONNTRACK_CHECKSUM=32, }; enum { NET_IPV4_FORWARD=8, NET_IPV4_DYNADDR=9, NET_IPV4_CONF=16, NET_IPV4_NEIGH=17, NET_IPV4_ROUTE=18, NET_IPV4_FIB_HASH=19, NET_IPV4_NETFILTER=20, NET_IPV4_TCP_TIMESTAMPS=33, NET_IPV4_TCP_WINDOW_SCALING=34, NET_IPV4_TCP_SACK=35, NET_IPV4_TCP_RETRANS_COLLAPSE=36, NET_IPV4_DEFAULT_TTL=37, NET_IPV4_AUTOCONFIG=38, NET_IPV4_NO_PMTU_DISC=39, NET_IPV4_TCP_SYN_RETRIES=40, NET_IPV4_IPFRAG_HIGH_THRESH=41, NET_IPV4_IPFRAG_LOW_THRESH=42, NET_IPV4_IPFRAG_TIME=43, NET_IPV4_TCP_MAX_KA_PROBES=44, NET_IPV4_TCP_KEEPALIVE_TIME=45, NET_IPV4_TCP_KEEPALIVE_PROBES=46, NET_IPV4_TCP_RETRIES1=47, NET_IPV4_TCP_RETRIES2=48, NET_IPV4_TCP_FIN_TIMEOUT=49, NET_IPV4_IP_MASQ_DEBUG=50, NET_TCP_SYNCOOKIES=51, NET_TCP_STDURG=52, NET_TCP_RFC1337=53, NET_TCP_SYN_TAILDROP=54, NET_TCP_MAX_SYN_BACKLOG=55, NET_IPV4_LOCAL_PORT_RANGE=56, NET_IPV4_ICMP_ECHO_IGNORE_ALL=57, NET_IPV4_ICMP_ECHO_IGNORE_BROADCASTS=58, NET_IPV4_ICMP_SOURCEQUENCH_RATE=59, NET_IPV4_ICMP_DESTUNREACH_RATE=60, NET_IPV4_ICMP_TIMEEXCEED_RATE=61, NET_IPV4_ICMP_PARAMPROB_RATE=62, NET_IPV4_ICMP_ECHOREPLY_RATE=63, NET_IPV4_ICMP_IGNORE_BOGUS_ERROR_RESPONSES=64, NET_IPV4_IGMP_MAX_MEMBERSHIPS=65, NET_TCP_TW_RECYCLE=66, NET_IPV4_ALWAYS_DEFRAG=67, NET_IPV4_TCP_KEEPALIVE_INTVL=68, NET_IPV4_INET_PEER_THRESHOLD=69, NET_IPV4_INET_PEER_MINTTL=70, NET_IPV4_INET_PEER_MAXTTL=71, NET_IPV4_INET_PEER_GC_MINTIME=72, NET_IPV4_INET_PEER_GC_MAXTIME=73, NET_TCP_ORPHAN_RETRIES=74, NET_TCP_ABORT_ON_OVERFLOW=75, NET_TCP_SYNACK_RETRIES=76, NET_TCP_MAX_ORPHANS=77, NET_TCP_MAX_TW_BUCKETS=78, NET_TCP_FACK=79, NET_TCP_REORDERING=80, NET_TCP_ECN=81, NET_TCP_DSACK=82, NET_TCP_MEM=83, NET_TCP_WMEM=84, NET_TCP_RMEM=85, NET_TCP_APP_WIN=86, NET_TCP_ADV_WIN_SCALE=87, NET_IPV4_NONLOCAL_BIND=88, NET_IPV4_ICMP_RATELIMIT=89, NET_IPV4_ICMP_RATEMASK=90, NET_TCP_TW_REUSE=91, NET_TCP_FRTO=92, NET_TCP_LOW_LATENCY=93, NET_IPV4_IPFRAG_SECRET_INTERVAL=94, NET_IPV4_IGMP_MAX_MSF=96, NET_TCP_NO_METRICS_SAVE=97, NET_TCP_DEFAULT_WIN_SCALE=105, NET_TCP_MODERATE_RCVBUF=106, NET_TCP_TSO_WIN_DIVISOR=107, NET_TCP_BIC_BETA=108, NET_IPV4_ICMP_ERRORS_USE_INBOUND_IFADDR=109, NET_TCP_CONG_CONTROL=110, NET_TCP_ABC=111, NET_IPV4_IPFRAG_MAX_DIST=112, NET_TCP_MTU_PROBING=113, NET_TCP_BASE_MSS=114, NET_IPV4_TCP_WORKAROUND_SIGNED_WINDOWS=115, NET_TCP_DMA_COPYBREAK=116, NET_TCP_SLOW_START_AFTER_IDLE=117, NET_CIPSOV4_CACHE_ENABLE=118, NET_CIPSOV4_CACHE_BUCKET_SIZE=119, NET_CIPSOV4_RBM_OPTFMT=120, NET_CIPSOV4_RBM_STRICTVALID=121, NET_TCP_AVAIL_CONG_CONTROL=122, NET_TCP_ALLOWED_CONG_CONTROL=123, NET_TCP_MAX_SSTHRESH=124, NET_TCP_FRTO_RESPONSE=125, }; enum { NET_IPV4_ROUTE_FLUSH=1, NET_IPV4_ROUTE_MIN_DELAY=2, NET_IPV4_ROUTE_MAX_DELAY=3, NET_IPV4_ROUTE_GC_THRESH=4, NET_IPV4_ROUTE_MAX_SIZE=5, NET_IPV4_ROUTE_GC_MIN_INTERVAL=6, NET_IPV4_ROUTE_GC_TIMEOUT=7, NET_IPV4_ROUTE_GC_INTERVAL=8, NET_IPV4_ROUTE_REDIRECT_LOAD=9, NET_IPV4_ROUTE_REDIRECT_NUMBER=10, NET_IPV4_ROUTE_REDIRECT_SILENCE=11, NET_IPV4_ROUTE_ERROR_COST=12, NET_IPV4_ROUTE_ERROR_BURST=13, NET_IPV4_ROUTE_GC_ELASTICITY=14, NET_IPV4_ROUTE_MTU_EXPIRES=15, NET_IPV4_ROUTE_MIN_PMTU=16, NET_IPV4_ROUTE_MIN_ADVMSS=17, NET_IPV4_ROUTE_SECRET_INTERVAL=18, NET_IPV4_ROUTE_GC_MIN_INTERVAL_MS=19, }; enum { NET_PROTO_CONF_ALL=-2, NET_PROTO_CONF_DEFAULT=-3 }; enum { NET_IPV4_CONF_FORWARDING=1, NET_IPV4_CONF_MC_FORWARDING=2, NET_IPV4_CONF_PROXY_ARP=3, NET_IPV4_CONF_ACCEPT_REDIRECTS=4, NET_IPV4_CONF_SECURE_REDIRECTS=5, NET_IPV4_CONF_SEND_REDIRECTS=6, NET_IPV4_CONF_SHARED_MEDIA=7, NET_IPV4_CONF_RP_FILTER=8, NET_IPV4_CONF_ACCEPT_SOURCE_ROUTE=9, NET_IPV4_CONF_BOOTP_RELAY=10, NET_IPV4_CONF_LOG_MARTIANS=11, NET_IPV4_CONF_TAG=12, NET_IPV4_CONF_ARPFILTER=13, NET_IPV4_CONF_MEDIUM_ID=14, NET_IPV4_CONF_NOXFRM=15, NET_IPV4_CONF_NOPOLICY=16, NET_IPV4_CONF_FORCE_IGMP_VERSION=17, NET_IPV4_CONF_ARP_ANNOUNCE=18, NET_IPV4_CONF_ARP_IGNORE=19, NET_IPV4_CONF_PROMOTE_SECONDARIES=20, NET_IPV4_CONF_ARP_ACCEPT=21, NET_IPV4_CONF_ARP_NOTIFY=22, }; enum { NET_IPV4_NF_CONNTRACK_MAX=1, NET_IPV4_NF_CONNTRACK_TCP_TIMEOUT_SYN_SENT=2, NET_IPV4_NF_CONNTRACK_TCP_TIMEOUT_SYN_RECV=3, NET_IPV4_NF_CONNTRACK_TCP_TIMEOUT_ESTABLISHED=4, NET_IPV4_NF_CONNTRACK_TCP_TIMEOUT_FIN_WAIT=5, NET_IPV4_NF_CONNTRACK_TCP_TIMEOUT_CLOSE_WAIT=6, NET_IPV4_NF_CONNTRACK_TCP_TIMEOUT_LAST_ACK=7, NET_IPV4_NF_CONNTRACK_TCP_TIMEOUT_TIME_WAIT=8, NET_IPV4_NF_CONNTRACK_TCP_TIMEOUT_CLOSE=9, NET_IPV4_NF_CONNTRACK_UDP_TIMEOUT=10, NET_IPV4_NF_CONNTRACK_UDP_TIMEOUT_STREAM=11, NET_IPV4_NF_CONNTRACK_ICMP_TIMEOUT=12, NET_IPV4_NF_CONNTRACK_GENERIC_TIMEOUT=13, NET_IPV4_NF_CONNTRACK_BUCKETS=14, NET_IPV4_NF_CONNTRACK_LOG_INVALID=15, NET_IPV4_NF_CONNTRACK_TCP_TIMEOUT_MAX_RETRANS=16, NET_IPV4_NF_CONNTRACK_TCP_LOOSE=17, NET_IPV4_NF_CONNTRACK_TCP_BE_LIBERAL=18, NET_IPV4_NF_CONNTRACK_TCP_MAX_RETRANS=19, NET_IPV4_NF_CONNTRACK_SCTP_TIMEOUT_CLOSED=20, NET_IPV4_NF_CONNTRACK_SCTP_TIMEOUT_COOKIE_WAIT=21, NET_IPV4_NF_CONNTRACK_SCTP_TIMEOUT_COOKIE_ECHOED=22, NET_IPV4_NF_CONNTRACK_SCTP_TIMEOUT_ESTABLISHED=23, NET_IPV4_NF_CONNTRACK_SCTP_TIMEOUT_SHUTDOWN_SENT=24, NET_IPV4_NF_CONNTRACK_SCTP_TIMEOUT_SHUTDOWN_RECD=25, NET_IPV4_NF_CONNTRACK_SCTP_TIMEOUT_SHUTDOWN_ACK_SENT=26, NET_IPV4_NF_CONNTRACK_COUNT=27, NET_IPV4_NF_CONNTRACK_CHECKSUM=28, }; enum { NET_IPV6_CONF=16, NET_IPV6_NEIGH=17, NET_IPV6_ROUTE=18, NET_IPV6_ICMP=19, NET_IPV6_BINDV6ONLY=20, NET_IPV6_IP6FRAG_HIGH_THRESH=21, NET_IPV6_IP6FRAG_LOW_THRESH=22, NET_IPV6_IP6FRAG_TIME=23, NET_IPV6_IP6FRAG_SECRET_INTERVAL=24, NET_IPV6_MLD_MAX_MSF=25, }; enum { NET_IPV6_ROUTE_FLUSH=1, NET_IPV6_ROUTE_GC_THRESH=2, NET_IPV6_ROUTE_MAX_SIZE=3, NET_IPV6_ROUTE_GC_MIN_INTERVAL=4, NET_IPV6_ROUTE_GC_TIMEOUT=5, NET_IPV6_ROUTE_GC_INTERVAL=6, NET_IPV6_ROUTE_GC_ELASTICITY=7, NET_IPV6_ROUTE_MTU_EXPIRES=8, NET_IPV6_ROUTE_MIN_ADVMSS=9, NET_IPV6_ROUTE_GC_MIN_INTERVAL_MS=10 }; enum { NET_IPV6_FORWARDING=1, NET_IPV6_HOP_LIMIT=2, NET_IPV6_MTU=3, NET_IPV6_ACCEPT_RA=4, NET_IPV6_ACCEPT_REDIRECTS=5, NET_IPV6_AUTOCONF=6, NET_IPV6_DAD_TRANSMITS=7, NET_IPV6_RTR_SOLICITS=8, NET_IPV6_RTR_SOLICIT_INTERVAL=9, NET_IPV6_RTR_SOLICIT_DELAY=10, NET_IPV6_USE_TEMPADDR=11, NET_IPV6_TEMP_VALID_LFT=12, NET_IPV6_TEMP_PREFERED_LFT=13, NET_IPV6_REGEN_MAX_RETRY=14, NET_IPV6_MAX_DESYNC_FACTOR=15, NET_IPV6_MAX_ADDRESSES=16, NET_IPV6_FORCE_MLD_VERSION=17, NET_IPV6_ACCEPT_RA_DEFRTR=18, NET_IPV6_ACCEPT_RA_PINFO=19, NET_IPV6_ACCEPT_RA_RTR_PREF=20, NET_IPV6_RTR_PROBE_INTERVAL=21, NET_IPV6_ACCEPT_RA_RT_INFO_MAX_PLEN=22, NET_IPV6_PROXY_NDP=23, NET_IPV6_ACCEPT_SOURCE_ROUTE=25, __NET_IPV6_MAX }; enum { NET_IPV6_ICMP_RATELIMIT=1 }; enum { NET_NEIGH_MCAST_SOLICIT=1, NET_NEIGH_UCAST_SOLICIT=2, NET_NEIGH_APP_SOLICIT=3, NET_NEIGH_RETRANS_TIME=4, NET_NEIGH_REACHABLE_TIME=5, NET_NEIGH_DELAY_PROBE_TIME=6, NET_NEIGH_GC_STALE_TIME=7, NET_NEIGH_UNRES_QLEN=8, NET_NEIGH_PROXY_QLEN=9, NET_NEIGH_ANYCAST_DELAY=10, NET_NEIGH_PROXY_DELAY=11, NET_NEIGH_LOCKTIME=12, NET_NEIGH_GC_INTERVAL=13, NET_NEIGH_GC_THRESH1=14, NET_NEIGH_GC_THRESH2=15, NET_NEIGH_GC_THRESH3=16, NET_NEIGH_RETRANS_TIME_MS=17, NET_NEIGH_REACHABLE_TIME_MS=18, }; enum { NET_DCCP_DEFAULT=1, }; enum { NET_IPX_PPROP_BROADCASTING=1, NET_IPX_FORWARDING=2 }; enum { NET_LLC2=1, NET_LLC_STATION=2, }; enum { NET_LLC2_TIMEOUT=1, }; enum { NET_LLC_STATION_ACK_TIMEOUT=1, }; enum { NET_LLC2_ACK_TIMEOUT=1, NET_LLC2_P_TIMEOUT=2, NET_LLC2_REJ_TIMEOUT=3, NET_LLC2_BUSY_TIMEOUT=4, }; enum { NET_ATALK_AARP_EXPIRY_TIME=1, NET_ATALK_AARP_TICK_TIME=2, NET_ATALK_AARP_RETRANSMIT_LIMIT=3, NET_ATALK_AARP_RESOLVE_TIME=4 }; enum { NET_NETROM_DEFAULT_PATH_QUALITY=1, NET_NETROM_OBSOLESCENCE_COUNT_INITIALISER=2, NET_NETROM_NETWORK_TTL_INITIALISER=3, NET_NETROM_TRANSPORT_TIMEOUT=4, NET_NETROM_TRANSPORT_MAXIMUM_TRIES=5, NET_NETROM_TRANSPORT_ACKNOWLEDGE_DELAY=6, NET_NETROM_TRANSPORT_BUSY_DELAY=7, NET_NETROM_TRANSPORT_REQUESTED_WINDOW_SIZE=8, NET_NETROM_TRANSPORT_NO_ACTIVITY_TIMEOUT=9, NET_NETROM_ROUTING_CONTROL=10, NET_NETROM_LINK_FAILS_COUNT=11, NET_NETROM_RESET=12 }; enum { NET_AX25_IP_DEFAULT_MODE=1, NET_AX25_DEFAULT_MODE=2, NET_AX25_BACKOFF_TYPE=3, NET_AX25_CONNECT_MODE=4, NET_AX25_STANDARD_WINDOW=5, NET_AX25_EXTENDED_WINDOW=6, NET_AX25_T1_TIMEOUT=7, NET_AX25_T2_TIMEOUT=8, NET_AX25_T3_TIMEOUT=9, NET_AX25_IDLE_TIMEOUT=10, NET_AX25_N2=11, NET_AX25_PACLEN=12, NET_AX25_PROTOCOL=13, NET_AX25_DAMA_SLAVE_TIMEOUT=14 }; enum { NET_ROSE_RESTART_REQUEST_TIMEOUT=1, NET_ROSE_CALL_REQUEST_TIMEOUT=2, NET_ROSE_RESET_REQUEST_TIMEOUT=3, NET_ROSE_CLEAR_REQUEST_TIMEOUT=4, NET_ROSE_ACK_HOLD_BACK_TIMEOUT=5, NET_ROSE_ROUTING_CONTROL=6, NET_ROSE_LINK_FAIL_TIMEOUT=7, NET_ROSE_MAX_VCS=8, NET_ROSE_WINDOW_SIZE=9, NET_ROSE_NO_ACTIVITY_TIMEOUT=10 }; enum { NET_X25_RESTART_REQUEST_TIMEOUT=1, NET_X25_CALL_REQUEST_TIMEOUT=2, NET_X25_RESET_REQUEST_TIMEOUT=3, NET_X25_CLEAR_REQUEST_TIMEOUT=4, NET_X25_ACK_HOLD_BACK_TIMEOUT=5, NET_X25_FORWARD=6 }; enum { NET_TR_RIF_TIMEOUT=1 }; enum { NET_DECNET_NODE_TYPE = 1, NET_DECNET_NODE_ADDRESS = 2, NET_DECNET_NODE_NAME = 3, NET_DECNET_DEFAULT_DEVICE = 4, NET_DECNET_TIME_WAIT = 5, NET_DECNET_DN_COUNT = 6, NET_DECNET_DI_COUNT = 7, NET_DECNET_DR_COUNT = 8, NET_DECNET_DST_GC_INTERVAL = 9, NET_DECNET_CONF = 10, NET_DECNET_NO_FC_MAX_CWND = 11, NET_DECNET_MEM = 12, NET_DECNET_RMEM = 13, NET_DECNET_WMEM = 14, NET_DECNET_DEBUG_LEVEL = 255 }; enum { NET_DECNET_CONF_LOOPBACK = -2, NET_DECNET_CONF_DDCMP = -3, NET_DECNET_CONF_PPP = -4, NET_DECNET_CONF_X25 = -5, NET_DECNET_CONF_GRE = -6, NET_DECNET_CONF_ETHER = -7 }; enum { NET_DECNET_CONF_DEV_PRIORITY = 1, NET_DECNET_CONF_DEV_T1 = 2, NET_DECNET_CONF_DEV_T2 = 3, NET_DECNET_CONF_DEV_T3 = 4, NET_DECNET_CONF_DEV_FORWARDING = 5, NET_DECNET_CONF_DEV_BLKSIZE = 6, NET_DECNET_CONF_DEV_STATE = 7 }; enum { NET_SCTP_RTO_INITIAL = 1, NET_SCTP_RTO_MIN = 2, NET_SCTP_RTO_MAX = 3, NET_SCTP_RTO_ALPHA = 4, NET_SCTP_RTO_BETA = 5, NET_SCTP_VALID_COOKIE_LIFE = 6, NET_SCTP_ASSOCIATION_MAX_RETRANS = 7, NET_SCTP_PATH_MAX_RETRANS = 8, NET_SCTP_MAX_INIT_RETRANSMITS = 9, NET_SCTP_HB_INTERVAL = 10, NET_SCTP_PRESERVE_ENABLE = 11, NET_SCTP_MAX_BURST = 12, NET_SCTP_ADDIP_ENABLE = 13, NET_SCTP_PRSCTP_ENABLE = 14, NET_SCTP_SNDBUF_POLICY = 15, NET_SCTP_SACK_TIMEOUT = 16, NET_SCTP_RCVBUF_POLICY = 17, }; enum { NET_BRIDGE_NF_CALL_ARPTABLES = 1, NET_BRIDGE_NF_CALL_IPTABLES = 2, NET_BRIDGE_NF_CALL_IP6TABLES = 3, NET_BRIDGE_NF_FILTER_VLAN_TAGGED = 4, NET_BRIDGE_NF_FILTER_PPPOE_TAGGED = 5, }; enum { NET_IRDA_DISCOVERY=1, NET_IRDA_DEVNAME=2, NET_IRDA_DEBUG=3, NET_IRDA_FAST_POLL=4, NET_IRDA_DISCOVERY_SLOTS=5, NET_IRDA_DISCOVERY_TIMEOUT=6, NET_IRDA_SLOT_TIMEOUT=7, NET_IRDA_MAX_BAUD_RATE=8, NET_IRDA_MIN_TX_TURN_TIME=9, NET_IRDA_MAX_TX_DATA_SIZE=10, NET_IRDA_MAX_TX_WINDOW=11, NET_IRDA_MAX_NOREPLY_TIME=12, NET_IRDA_WARN_NOREPLY_TIME=13, NET_IRDA_LAP_KEEPALIVE_TIME=14, }; enum { FS_NRINODE=1, FS_STATINODE=2, FS_MAXINODE=3, FS_NRDQUOT=4, FS_MAXDQUOT=5, FS_NRFILE=6, FS_MAXFILE=7, FS_DENTRY=8, FS_NRSUPER=9, FS_MAXSUPER=10, FS_OVERFLOWUID=11, FS_OVERFLOWGID=12, FS_LEASES=13, FS_DIR_NOTIFY=14, FS_LEASE_TIME=15, FS_DQSTATS=16, FS_XFS=17, FS_AIO_NR=18, FS_AIO_MAX_NR=19, FS_INOTIFY=20, FS_OCFS2=988, }; enum { FS_DQ_LOOKUPS = 1, FS_DQ_DROPS = 2, FS_DQ_READS = 3, FS_DQ_WRITES = 4, FS_DQ_CACHE_HITS = 5, FS_DQ_ALLOCATED = 6, FS_DQ_FREE = 7, FS_DQ_SYNCS = 8, FS_DQ_WARNINGS = 9, }; enum { DEV_CDROM=1, DEV_HWMON=2, DEV_PARPORT=3, DEV_RAID=4, DEV_MAC_HID=5, DEV_SCSI=6, DEV_IPMI=7, }; enum { DEV_CDROM_INFO=1, DEV_CDROM_AUTOCLOSE=2, DEV_CDROM_AUTOEJECT=3, DEV_CDROM_DEBUG=4, DEV_CDROM_LOCK=5, DEV_CDROM_CHECK_MEDIA=6 }; enum { DEV_PARPORT_DEFAULT=-3 }; enum { DEV_RAID_SPEED_LIMIT_MIN=1, DEV_RAID_SPEED_LIMIT_MAX=2 }; enum { DEV_PARPORT_DEFAULT_TIMESLICE=1, DEV_PARPORT_DEFAULT_SPINTIME=2 }; enum { DEV_PARPORT_SPINTIME=1, DEV_PARPORT_BASE_ADDR=2, DEV_PARPORT_IRQ=3, DEV_PARPORT_DMA=4, DEV_PARPORT_MODES=5, DEV_PARPORT_DEVICES=6, DEV_PARPORT_AUTOPROBE=16 }; enum { DEV_PARPORT_DEVICES_ACTIVE=-3, }; enum { DEV_PARPORT_DEVICE_TIMESLICE=1, }; enum { DEV_MAC_HID_KEYBOARD_SENDS_LINUX_KEYCODES=1, DEV_MAC_HID_KEYBOARD_LOCK_KEYCODES=2, DEV_MAC_HID_MOUSE_BUTTON_EMULATION=3, DEV_MAC_HID_MOUSE_BUTTON2_KEYCODE=4, DEV_MAC_HID_MOUSE_BUTTON3_KEYCODE=5, DEV_MAC_HID_ADB_MOUSE_SENDS_KEYCODES=6 }; enum { DEV_SCSI_LOGGING_LEVEL=1, }; enum { DEV_IPMI_POWEROFF_POWERCYCLE=1, }; enum { ABI_DEFHANDLER_COFF=1, ABI_DEFHANDLER_ELF=2, ABI_DEFHANDLER_LCALL7=3, ABI_DEFHANDLER_LIBCSO=4, ABI_TRACE=5, ABI_FAKE_UTSNAME=6, }; # 44 "/usr/include/x86_64-linux-gnu/sys/sysctl.h" 2 3 4 # 63 "/usr/include/x86_64-linux-gnu/sys/sysctl.h" 3 4 # 1 "/usr/include/x86_64-linux-gnu/bits/sysctl.h" 1 3 4 # 64 "/usr/include/x86_64-linux-gnu/sys/sysctl.h" 2 3 4 extern int sysctl (int *__name, int __nlen, void *__oldval, size_t *__oldlenp, void *__newval, size_t __newlen) __attribute__ ((__nothrow__ , __leaf__)); # 3 "/tmp/petsc-U9YCMv/PETSc.packages.pthread/conftest.c" 2 Defined "HAVE_SYS_SYSCTL_H" to "1" ================================================================================ TEST checkSharedLibrary from PETSc.packages.pthread(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/package.py:518) TESTING: checkSharedLibrary from PETSc.packages.pthread(config/BuildSystem/config/package.py:518) By default we don't care about checking if the library is shared Popping language C ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.pthreadclasses(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/package.py:522) TESTING: alternateConfigureLibrary from PETSc.packages.pthreadclasses(config/BuildSystem/config/package.py:522) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.openmp(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/package.py:522) TESTING: alternateConfigureLibrary from PETSc.packages.openmp(config/BuildSystem/config/package.py:522) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.server(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/package.py:522) TESTING: alternateConfigureLibrary from PETSc.packages.server(config/BuildSystem/config/package.py:522) Called if --with-packagename=0; does nothing by default Not a clone of PETSc, don't need c2html Pushing language C ================================================================================ TEST configureLibrary from PETSc.packages.X(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/package.py:464) TESTING: configureLibrary from PETSc.packages.X(config/BuildSystem/config/package.py:464) Find an installation and check if it can work with PETSc ================================================================================== Checking for a functional X Checking for library in Package specific search directory X: ['libX11.a'] ================================================================================ TEST check from config.libraries(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/libraries.py:145) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:145) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for function XSetWMName in library ['libX11.a'] [] Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.libraries/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -o /tmp/petsc-U9YCMv/config.libraries/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char XSetWMName(); int main() { XSetWMName() ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -lX11 -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -lX11 -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -lX11 -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -lX11 -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -lX11 -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -lX11 -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Possible ERROR while running linker: /usr/bin/ld: cannot find -lX11 collect2: error: ld returned 1 exit status /usr/bin/ld: cannot find -lX11 collect2: error: ld returned 1 exit status make: *** [all] Error 1 output: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -lX11 -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -lX11 -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -lX11 -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -lX11 -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt ret = 256 error message = {/usr/bin/ld: cannot find -lX11 collect2: error: ld returned 1 exit status /usr/bin/ld: cannot find -lX11 collect2: error: ld returned 1 exit status make: *** [all] Error 1 } Pushing language C Popping language C in tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -lX11 -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char XSetWMName(); int main() { XSetWMName() ; return 0; } Popping language C Checking for library in Package specific search directory X: ['lib64/libX11.a'] ================================================================================ TEST check from config.libraries(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/libraries.py:145) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:145) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for function XSetWMName in library ['lib64/libX11.a'] [] Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.libraries/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -o /tmp/petsc-U9YCMv/config.libraries/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char XSetWMName(); int main() { XSetWMName() ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -lX11 -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -lX11 -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -lX11 -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -lX11 -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -lX11 -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -lX11 -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Possible ERROR while running linker: /usr/bin/ld: cannot find -lX11 collect2: error: ld returned 1 exit status /usr/bin/ld: cannot find -lX11 collect2: error: ld returned 1 exit status make: *** [all] Error 1 output: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -lX11 -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -lX11 -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -lX11 -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -lX11 -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt ret = 256 error message = {/usr/bin/ld: cannot find -lX11 collect2: error: ld returned 1 exit status /usr/bin/ld: cannot find -lX11 collect2: error: ld returned 1 exit status make: *** [all] Error 1 } Pushing language C Popping language C in tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -lX11 -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char XSetWMName(); int main() { XSetWMName() ; return 0; } Popping language C Directory does not exist: /opt/X11 (while checking "Package specific search directory X" for "['/opt/X11/lib/libX11.a']") Directory does not exist: /opt/X11 (while checking "Package specific search directory X" for "['/opt/X11/lib64/libX11.a']") Directory does not exist: /Developer/SDKs/MacOSX10.5.sdk/usr/X11 (while checking "Package specific search directory X" for "['/Developer/SDKs/MacOSX10.5.sdk/usr/X11/lib/libX11.a']") Directory does not exist: /Developer/SDKs/MacOSX10.5.sdk/usr/X11 (while checking "Package specific search directory X" for "['/Developer/SDKs/MacOSX10.5.sdk/usr/X11/lib64/libX11.a']") Directory does not exist: /Developer/SDKs/MacOSX10.4u.sdk/usr/X11R6 (while checking "Package specific search directory X" for "['/Developer/SDKs/MacOSX10.4u.sdk/usr/X11R6/lib/libX11.a']") Directory does not exist: /Developer/SDKs/MacOSX10.4u.sdk/usr/X11R6 (while checking "Package specific search directory X" for "['/Developer/SDKs/MacOSX10.4u.sdk/usr/X11R6/lib64/libX11.a']") Directory does not exist: /usr/X11 (while checking "Package specific search directory X" for "['/usr/X11/lib/libX11.a']") Directory does not exist: /usr/X11 (while checking "Package specific search directory X" for "['/usr/X11/lib64/libX11.a']") Directory does not exist: /usr/X11R6 (while checking "Package specific search directory X" for "['/usr/X11R6/lib/libX11.a']") Directory does not exist: /usr/X11R6 (while checking "Package specific search directory X" for "['/usr/X11R6/lib64/libX11.a']") Directory does not exist: /usr/X11R5 (while checking "Package specific search directory X" for "['/usr/X11R5/lib/libX11.a']") Directory does not exist: /usr/X11R5 (while checking "Package specific search directory X" for "['/usr/X11R5/lib64/libX11.a']") Directory does not exist: /usr/X11R4 (while checking "Package specific search directory X" for "['/usr/X11R4/lib/libX11.a']") Directory does not exist: /usr/X11R4 (while checking "Package specific search directory X" for "['/usr/X11R4/lib64/libX11.a']") Directory does not exist: /usr/local/X11 (while checking "Package specific search directory X" for "['/usr/local/X11/lib/libX11.a']") Directory does not exist: /usr/local/X11 (while checking "Package specific search directory X" for "['/usr/local/X11/lib64/libX11.a']") Directory does not exist: /usr/local/X11R6 (while checking "Package specific search directory X" for "['/usr/local/X11R6/lib/libX11.a']") Directory does not exist: /usr/local/X11R6 (while checking "Package specific search directory X" for "['/usr/local/X11R6/lib64/libX11.a']") Directory does not exist: /usr/local/X11R5 (while checking "Package specific search directory X" for "['/usr/local/X11R5/lib/libX11.a']") Directory does not exist: /usr/local/X11R5 (while checking "Package specific search directory X" for "['/usr/local/X11R5/lib64/libX11.a']") Directory does not exist: /usr/local/X11R4 (while checking "Package specific search directory X" for "['/usr/local/X11R4/lib/libX11.a']") Directory does not exist: /usr/local/X11R4 (while checking "Package specific search directory X" for "['/usr/local/X11R4/lib64/libX11.a']") Directory does not exist: /usr/X386 (while checking "Package specific search directory X" for "['/usr/X386/lib/libX11.a']") Directory does not exist: /usr/X386 (while checking "Package specific search directory X" for "['/usr/X386/lib64/libX11.a']") Directory does not exist: /usr/x386 (while checking "Package specific search directory X" for "['/usr/x386/lib/libX11.a']") Directory does not exist: /usr/x386 (while checking "Package specific search directory X" for "['/usr/x386/lib64/libX11.a']") Directory does not exist: /usr/XFree86/X11 (while checking "Package specific search directory X" for "['/usr/XFree86/X11/lib/libX11.a']") Directory does not exist: /usr/XFree86/X11 (while checking "Package specific search directory X" for "['/usr/XFree86/X11/lib64/libX11.a']") Checking for library in Package specific search directory X: ['/usr/local/lib/libX11.a'] Contents: ['man', 'games', 'sbin', 'include', 'etc', 'share', 'src', 'lib', 'bin'] ================================================================================ TEST check from config.libraries(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/libraries.py:145) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:145) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for function XSetWMName in library ['/usr/local/lib/libX11.a'] [] Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.libraries/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -o /tmp/petsc-U9YCMv/config.libraries/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char XSetWMName(); int main() { XSetWMName() ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/usr/local/lib -L/usr/local/lib -lX11 -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/usr/local/lib -L/usr/local/lib -lX11 -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/usr/local/lib -L/usr/local/lib -lX11 -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/usr/local/lib -L/usr/local/lib -lX11 -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/usr/local/lib -L/usr/local/lib -lX11 -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/usr/local/lib -L/usr/local/lib -lX11 -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Possible ERROR while running linker: /usr/bin/ld: cannot find -lX11 collect2: error: ld returned 1 exit status /usr/bin/ld: cannot find -lX11 collect2: error: ld returned 1 exit status make: *** [all] Error 1 output: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/usr/local/lib -L/usr/local/lib -lX11 -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/usr/local/lib -L/usr/local/lib -lX11 -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/usr/local/lib -L/usr/local/lib -lX11 -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/usr/local/lib -L/usr/local/lib -lX11 -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt ret = 256 error message = {/usr/bin/ld: cannot find -lX11 collect2: error: ld returned 1 exit status /usr/bin/ld: cannot find -lX11 collect2: error: ld returned 1 exit status make: *** [all] Error 1 } Pushing language C Popping language C in tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/usr/local/lib -L/usr/local/lib -lX11 -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char XSetWMName(); int main() { XSetWMName() ; return 0; } Popping language C Checking for library in Package specific search directory X: ['/usr/local/lib64/libX11.a'] Contents: ['man', 'games', 'sbin', 'include', 'etc', 'share', 'src', 'lib', 'bin'] ================================================================================ TEST check from config.libraries(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/libraries.py:145) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:145) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for function XSetWMName in library ['/usr/local/lib64/libX11.a'] [] Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.libraries/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -o /tmp/petsc-U9YCMv/config.libraries/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char XSetWMName(); int main() { XSetWMName() ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/usr/local/lib64 -L/usr/local/lib64 -lX11 -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/usr/local/lib64 -L/usr/local/lib64 -lX11 -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/usr/local/lib64 -L/usr/local/lib64 -lX11 -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/usr/local/lib64 -L/usr/local/lib64 -lX11 -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/usr/local/lib64 -L/usr/local/lib64 -lX11 -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/usr/local/lib64 -L/usr/local/lib64 -lX11 -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Possible ERROR while running linker: /usr/bin/ld: cannot find -lX11 collect2: error: ld returned 1 exit status /usr/bin/ld: cannot find -lX11 collect2: error: ld returned 1 exit status make: *** [all] Error 1 output: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/usr/local/lib64 -L/usr/local/lib64 -lX11 -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/usr/local/lib64 -L/usr/local/lib64 -lX11 -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/usr/local/lib64 -L/usr/local/lib64 -lX11 -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/usr/local/lib64 -L/usr/local/lib64 -lX11 -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt ret = 256 error message = {/usr/bin/ld: cannot find -lX11 collect2: error: ld returned 1 exit status /usr/bin/ld: cannot find -lX11 collect2: error: ld returned 1 exit status make: *** [all] Error 1 } Pushing language C Popping language C in tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/usr/local/lib64 -L/usr/local/lib64 -lX11 -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char XSetWMName(); int main() { XSetWMName() ; return 0; } Popping language C Directory does not exist: /usr/local/x11r5 (while checking "Package specific search directory X" for "['/usr/local/x11r5/lib/libX11.a']") Directory does not exist: /usr/local/x11r5 (while checking "Package specific search directory X" for "['/usr/local/x11r5/lib64/libX11.a']") Directory does not exist: /usr/lpp/Xamples (while checking "Package specific search directory X" for "['/usr/lpp/Xamples/lib/libX11.a']") Directory does not exist: /usr/lpp/Xamples (while checking "Package specific search directory X" for "['/usr/lpp/Xamples/lib64/libX11.a']") Directory does not exist: /usr/openwin (while checking "Package specific search directory X" for "['/usr/openwin/lib/libX11.a']") Directory does not exist: /usr/openwin (while checking "Package specific search directory X" for "['/usr/openwin/lib64/libX11.a']") Directory does not exist: /usr/openwin/share (while checking "Package specific search directory X" for "['/usr/openwin/share/lib/libX11.a']") Directory does not exist: /usr/openwin/share (while checking "Package specific search directory X" for "['/usr/openwin/share/lib64/libX11.a']") ================================================================================ TEST checkSharedLibrary from PETSc.packages.X(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/package.py:518) TESTING: checkSharedLibrary from PETSc.packages.X(config/BuildSystem/config/package.py:518) By default we don't care about checking if the library is shared Popping language C ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.Zoltan(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/package.py:522) TESTING: alternateConfigureLibrary from PETSc.packages.Zoltan(config/BuildSystem/config/package.py:522) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.Triangle(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/package.py:522) TESTING: alternateConfigureLibrary from PETSc.packages.Triangle(config/BuildSystem/config/package.py:522) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.afterimage(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/package.py:522) TESTING: alternateConfigureLibrary from PETSc.packages.afterimage(config/BuildSystem/config/package.py:522) Called if --with-packagename=0; does nothing by default ================================================================================ TEST configureRegression from PETSc.utilities.Regression(/home/hills/seska-hills/packages/petsc-3.4.2/config/PETSc/utilities/Regression.py:32) TESTING: configureRegression from PETSc.utilities.Regression(config/PETSc/utilities/Regression.py:32) Output a file listing the jobs that should be run by the PETSc buildtest Defined make macro "TEST_RUNS" to "C Fortran F90 F90_NoComplex F2003 Fortran_NoComplex C_NoComplex" ================================================================================ TEST alternateConfigureLibrary from config.packages.f2cblaslapack(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/package.py:522) TESTING: alternateConfigureLibrary from config.packages.f2cblaslapack(config/BuildSystem/config/package.py:522) Called if --with-packagename=0; does nothing by default ================================================================================ TEST configureLibrary from config.packages.BlasLapack(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/packages/BlasLapack.py:441) TESTING: configureLibrary from config.packages.BlasLapack(config/BuildSystem/config/packages/BlasLapack.py:441) Looking for BLAS/LAPACK in user specified directory: /home/hills/seska/packages/fblaslapack Files and directorys in that directory: ['lapack', 'makefile~', 'libfblas.a', 'linpack', 'libflapack.a', '.hg_archival.txt', 'libflinpack.a', 'makefile', 'blas', 'lapack-extra'] ================================================================================ Checking for a functional BLAS and LAPACK in User specified installation root (HPUX) ================================================================================ TEST checkLib from config.packages.BlasLapack(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/packages/BlasLapack.py:113) TESTING: checkLib from config.packages.BlasLapack(config/BuildSystem/config/packages/BlasLapack.py:113) Checking for BLAS and LAPACK symbols Checking for function ddot_ in library ['/home/hills/seska/packages/fblaslapack/libveclib.a'] ['-Wl,-rpath,/home/hills/seska/packages/openmpi/lib', '-L/home/hills/seska/packages/openmpi/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib', '-L/home/hills/seska/packages/tau/x86_64/lib', '-Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7', '-L/usr/lib/gcc/x86_64-linux-gnu/4.7', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-Wl,-rpath,/usr/lib/x86_64-linux-gnu', '-L/usr/lib/x86_64-linux-gnu', '-Wl,-rpath,/lib/x86_64-linux-gnu', '-L/lib/x86_64-linux-gnu', '-lmpichf90', '-lgfortran', '-lm', '-Wl,-rpath,/home/hills/seska/packages/openmpi/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib', '-Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-Wl,-rpath,/usr/lib/x86_64-linux-gnu', '-Wl,-rpath,/lib/x86_64-linux-gnu', '-lgfortran', '-lm', '-lquadmath', '-lm'] Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.libraries/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -o /tmp/petsc-U9YCMv/config.libraries/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char ddot_(); int main() { ddot_() ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lveclib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lveclib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lveclib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lveclib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lveclib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lveclib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Possible ERROR while running linker: /usr/bin/ld: cannot find -lveclib collect2: error: ld returned 1 exit status /usr/bin/ld: cannot find -lveclib collect2: error: ld returned 1 exit status make: *** [all] Error 1 output: Debug: Moving these libraries to the end of the link line: -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lveclib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lveclib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lveclib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lveclib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt ret = 256 error message = {/usr/bin/ld: cannot find -lveclib collect2: error: ld returned 1 exit status /usr/bin/ld: cannot find -lveclib collect2: error: ld returned 1 exit status make: *** [all] Error 1 } Pushing language C Popping language C in tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lveclib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char ddot_(); int main() { ddot_() ; return 0; } Popping language C Checking for no name mangling on BLAS/LAPACK Checking for function ddot in library ['/home/hills/seska/packages/fblaslapack/libveclib.a'] ['-Wl,-rpath,/home/hills/seska/packages/openmpi/lib', '-L/home/hills/seska/packages/openmpi/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib', '-L/home/hills/seska/packages/tau/x86_64/lib', '-Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7', '-L/usr/lib/gcc/x86_64-linux-gnu/4.7', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-Wl,-rpath,/usr/lib/x86_64-linux-gnu', '-L/usr/lib/x86_64-linux-gnu', '-Wl,-rpath,/lib/x86_64-linux-gnu', '-L/lib/x86_64-linux-gnu', '-lmpichf90', '-lgfortran', '-lm', '-Wl,-rpath,/home/hills/seska/packages/openmpi/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib', '-Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-Wl,-rpath,/usr/lib/x86_64-linux-gnu', '-Wl,-rpath,/lib/x86_64-linux-gnu', '-lgfortran', '-lm', '-lquadmath', '-lm'] Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.libraries/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -o /tmp/petsc-U9YCMv/config.libraries/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char ddot(); int main() { ddot() ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lveclib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lveclib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lveclib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lveclib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lveclib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lveclib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Possible ERROR while running linker: /usr/bin/ld: cannot find -lveclib collect2: error: ld returned 1 exit status /usr/bin/ld: cannot find -lveclib collect2: error: ld returned 1 exit status make: *** [all] Error 1 output: Debug: Moving these libraries to the end of the link line: -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lveclib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lveclib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lveclib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lveclib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt ret = 256 error message = {/usr/bin/ld: cannot find -lveclib collect2: error: ld returned 1 exit status /usr/bin/ld: cannot find -lveclib collect2: error: ld returned 1 exit status make: *** [all] Error 1 } Pushing language C Popping language C in tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lveclib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char ddot(); int main() { ddot() ; return 0; } Popping language C Checking for function dgetrs in library ['/home/hills/seska/packages/fblaslapack/liblapack.a'] ['-Wl,-rpath,/home/hills/seska/packages/openmpi/lib', '-L/home/hills/seska/packages/openmpi/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib', '-L/home/hills/seska/packages/tau/x86_64/lib', '-Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7', '-L/usr/lib/gcc/x86_64-linux-gnu/4.7', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-Wl,-rpath,/usr/lib/x86_64-linux-gnu', '-L/usr/lib/x86_64-linux-gnu', '-Wl,-rpath,/lib/x86_64-linux-gnu', '-L/lib/x86_64-linux-gnu', '-lmpichf90', '-lgfortran', '-lm', '-Wl,-rpath,/home/hills/seska/packages/openmpi/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib', '-Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-Wl,-rpath,/usr/lib/x86_64-linux-gnu', '-Wl,-rpath,/lib/x86_64-linux-gnu', '-lgfortran', '-lm', '-lquadmath', '-lm'] Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.libraries/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -o /tmp/petsc-U9YCMv/config.libraries/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dgetrs(); int main() { dgetrs() ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -llapack -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -llapack -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -llapack -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -llapack -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -llapack -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -llapack -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Possible ERROR while running linker: /usr/bin/ld: cannot find -llapack collect2: error: ld returned 1 exit status /usr/bin/ld: cannot find -llapack collect2: error: ld returned 1 exit status make: *** [all] Error 1 output: Debug: Moving these libraries to the end of the link line: -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -llapack -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -llapack -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -llapack -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -llapack -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt ret = 256 error message = {/usr/bin/ld: cannot find -llapack collect2: error: ld returned 1 exit status /usr/bin/ld: cannot find -llapack collect2: error: ld returned 1 exit status make: *** [all] Error 1 } Pushing language C Popping language C in tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -llapack -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dgetrs(); int main() { dgetrs() ; return 0; } Popping language C Checking for function dgeev in library ['/home/hills/seska/packages/fblaslapack/liblapack.a'] ['-Wl,-rpath,/home/hills/seska/packages/openmpi/lib', '-L/home/hills/seska/packages/openmpi/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib', '-L/home/hills/seska/packages/tau/x86_64/lib', '-Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7', '-L/usr/lib/gcc/x86_64-linux-gnu/4.7', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-Wl,-rpath,/usr/lib/x86_64-linux-gnu', '-L/usr/lib/x86_64-linux-gnu', '-Wl,-rpath,/lib/x86_64-linux-gnu', '-L/lib/x86_64-linux-gnu', '-lmpichf90', '-lgfortran', '-lm', '-Wl,-rpath,/home/hills/seska/packages/openmpi/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib', '-Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-Wl,-rpath,/usr/lib/x86_64-linux-gnu', '-Wl,-rpath,/lib/x86_64-linux-gnu', '-lgfortran', '-lm', '-lquadmath', '-lm'] Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.libraries/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -o /tmp/petsc-U9YCMv/config.libraries/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dgeev(); int main() { dgeev() ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -llapack -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -llapack -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -llapack -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -llapack -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -llapack -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -llapack -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Possible ERROR while running linker: /usr/bin/ld: cannot find -llapack collect2: error: ld returned 1 exit status /usr/bin/ld: cannot find -llapack collect2: error: ld returned 1 exit status make: *** [all] Error 1 output: Debug: Moving these libraries to the end of the link line: -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -llapack -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -llapack -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -llapack -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -llapack -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt ret = 256 error message = {/usr/bin/ld: cannot find -llapack collect2: error: ld returned 1 exit status /usr/bin/ld: cannot find -llapack collect2: error: ld returned 1 exit status make: *** [all] Error 1 } Pushing language C Popping language C in tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -llapack -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dgeev(); int main() { dgeev() ; return 0; } Popping language C Checking for underscore name mangling on BLAS/LAPACK Checking for function ddot_ in library ['/home/hills/seska/packages/fblaslapack/libveclib.a'] ['-Wl,-rpath,/home/hills/seska/packages/openmpi/lib', '-L/home/hills/seska/packages/openmpi/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib', '-L/home/hills/seska/packages/tau/x86_64/lib', '-Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7', '-L/usr/lib/gcc/x86_64-linux-gnu/4.7', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-Wl,-rpath,/usr/lib/x86_64-linux-gnu', '-L/usr/lib/x86_64-linux-gnu', '-Wl,-rpath,/lib/x86_64-linux-gnu', '-L/lib/x86_64-linux-gnu', '-lmpichf90', '-lgfortran', '-lm', '-Wl,-rpath,/home/hills/seska/packages/openmpi/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib', '-Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-Wl,-rpath,/usr/lib/x86_64-linux-gnu', '-Wl,-rpath,/lib/x86_64-linux-gnu', '-lgfortran', '-lm', '-lquadmath', '-lm'] Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.libraries/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -o /tmp/petsc-U9YCMv/config.libraries/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char ddot_(); int main() { ddot_() ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lveclib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lveclib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lveclib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lveclib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lveclib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lveclib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Possible ERROR while running linker: /usr/bin/ld: cannot find -lveclib collect2: error: ld returned 1 exit status /usr/bin/ld: cannot find -lveclib collect2: error: ld returned 1 exit status make: *** [all] Error 1 output: Debug: Moving these libraries to the end of the link line: -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lveclib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lveclib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lveclib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lveclib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt ret = 256 error message = {/usr/bin/ld: cannot find -lveclib collect2: error: ld returned 1 exit status /usr/bin/ld: cannot find -lveclib collect2: error: ld returned 1 exit status make: *** [all] Error 1 } Pushing language C Popping language C in tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lveclib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char ddot_(); int main() { ddot_() ; return 0; } Popping language C Checking for function dgetrs_ in library ['/home/hills/seska/packages/fblaslapack/liblapack.a'] ['-Wl,-rpath,/home/hills/seska/packages/openmpi/lib', '-L/home/hills/seska/packages/openmpi/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib', '-L/home/hills/seska/packages/tau/x86_64/lib', '-Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7', '-L/usr/lib/gcc/x86_64-linux-gnu/4.7', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-Wl,-rpath,/usr/lib/x86_64-linux-gnu', '-L/usr/lib/x86_64-linux-gnu', '-Wl,-rpath,/lib/x86_64-linux-gnu', '-L/lib/x86_64-linux-gnu', '-lmpichf90', '-lgfortran', '-lm', '-Wl,-rpath,/home/hills/seska/packages/openmpi/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib', '-Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-Wl,-rpath,/usr/lib/x86_64-linux-gnu', '-Wl,-rpath,/lib/x86_64-linux-gnu', '-lgfortran', '-lm', '-lquadmath', '-lm'] Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.libraries/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -o /tmp/petsc-U9YCMv/config.libraries/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dgetrs_(); int main() { dgetrs_() ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -llapack -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -llapack -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -llapack -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -llapack -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -llapack -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -llapack -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Possible ERROR while running linker: /usr/bin/ld: cannot find -llapack collect2: error: ld returned 1 exit status /usr/bin/ld: cannot find -llapack collect2: error: ld returned 1 exit status make: *** [all] Error 1 output: Debug: Moving these libraries to the end of the link line: -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -llapack -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -llapack -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -llapack -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -llapack -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt ret = 256 error message = {/usr/bin/ld: cannot find -llapack collect2: error: ld returned 1 exit status /usr/bin/ld: cannot find -llapack collect2: error: ld returned 1 exit status make: *** [all] Error 1 } Pushing language C Popping language C in tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -llapack -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dgetrs_(); int main() { dgetrs_() ; return 0; } Popping language C Checking for function dgeev_ in library ['/home/hills/seska/packages/fblaslapack/liblapack.a'] ['-Wl,-rpath,/home/hills/seska/packages/openmpi/lib', '-L/home/hills/seska/packages/openmpi/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib', '-L/home/hills/seska/packages/tau/x86_64/lib', '-Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7', '-L/usr/lib/gcc/x86_64-linux-gnu/4.7', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-Wl,-rpath,/usr/lib/x86_64-linux-gnu', '-L/usr/lib/x86_64-linux-gnu', '-Wl,-rpath,/lib/x86_64-linux-gnu', '-L/lib/x86_64-linux-gnu', '-lmpichf90', '-lgfortran', '-lm', '-Wl,-rpath,/home/hills/seska/packages/openmpi/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib', '-Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-Wl,-rpath,/usr/lib/x86_64-linux-gnu', '-Wl,-rpath,/lib/x86_64-linux-gnu', '-lgfortran', '-lm', '-lquadmath', '-lm'] Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.libraries/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -o /tmp/petsc-U9YCMv/config.libraries/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dgeev_(); int main() { dgeev_() ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -llapack -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -llapack -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -llapack -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -llapack -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -llapack -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -llapack -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Possible ERROR while running linker: /usr/bin/ld: cannot find -llapack collect2: error: ld returned 1 exit status /usr/bin/ld: cannot find -llapack collect2: error: ld returned 1 exit status make: *** [all] Error 1 output: Debug: Moving these libraries to the end of the link line: -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -llapack -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -llapack -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -llapack -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -llapack -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt ret = 256 error message = {/usr/bin/ld: cannot find -llapack collect2: error: ld returned 1 exit status /usr/bin/ld: cannot find -llapack collect2: error: ld returned 1 exit status make: *** [all] Error 1 } Pushing language C Popping language C in tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -llapack -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dgeev_(); int main() { dgeev_() ; return 0; } Popping language C Checking for function df2cblaslapack311_id in library ['/home/hills/seska/packages/fblaslapack/libveclib.a'] ['-Wl,-rpath,/home/hills/seska/packages/openmpi/lib', '-L/home/hills/seska/packages/openmpi/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib', '-L/home/hills/seska/packages/tau/x86_64/lib', '-Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7', '-L/usr/lib/gcc/x86_64-linux-gnu/4.7', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-Wl,-rpath,/usr/lib/x86_64-linux-gnu', '-L/usr/lib/x86_64-linux-gnu', '-Wl,-rpath,/lib/x86_64-linux-gnu', '-L/lib/x86_64-linux-gnu', '-lmpichf90', '-lgfortran', '-lm', '-Wl,-rpath,/home/hills/seska/packages/openmpi/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib', '-Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-Wl,-rpath,/usr/lib/x86_64-linux-gnu', '-Wl,-rpath,/lib/x86_64-linux-gnu', '-lgfortran', '-lm', '-lquadmath', '-lm'] Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.libraries/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -o /tmp/petsc-U9YCMv/config.libraries/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char df2cblaslapack311_id(); int main() { df2cblaslapack311_id() ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lveclib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lveclib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lveclib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lveclib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lveclib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lveclib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Possible ERROR while running linker: /usr/bin/ld: cannot find -lveclib collect2: error: ld returned 1 exit status /usr/bin/ld: cannot find -lveclib collect2: error: ld returned 1 exit status make: *** [all] Error 1 output: Debug: Moving these libraries to the end of the link line: -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lveclib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lveclib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lveclib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lveclib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt ret = 256 error message = {/usr/bin/ld: cannot find -lveclib collect2: error: ld returned 1 exit status /usr/bin/ld: cannot find -lveclib collect2: error: ld returned 1 exit status make: *** [all] Error 1 } Pushing language C Popping language C in tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lveclib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char df2cblaslapack311_id(); int main() { df2cblaslapack311_id() ; return 0; } Popping language C ================================================================================ Checking for a functional BLAS and LAPACK in User specified installation root (F2C) ================================================================================ TEST checkLib from config.packages.BlasLapack(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/packages/BlasLapack.py:113) TESTING: checkLib from config.packages.BlasLapack(config/BuildSystem/config/packages/BlasLapack.py:113) Checking for BLAS and LAPACK symbols Checking for function ddot_ in library ['/home/hills/seska/packages/fblaslapack/libf2cblas.a'] ['-Wl,-rpath,/home/hills/seska/packages/openmpi/lib', '-L/home/hills/seska/packages/openmpi/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib', '-L/home/hills/seska/packages/tau/x86_64/lib', '-Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7', '-L/usr/lib/gcc/x86_64-linux-gnu/4.7', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-Wl,-rpath,/usr/lib/x86_64-linux-gnu', '-L/usr/lib/x86_64-linux-gnu', '-Wl,-rpath,/lib/x86_64-linux-gnu', '-L/lib/x86_64-linux-gnu', '-lmpichf90', '-lgfortran', '-lm', '-Wl,-rpath,/home/hills/seska/packages/openmpi/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib', '-Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-Wl,-rpath,/usr/lib/x86_64-linux-gnu', '-Wl,-rpath,/lib/x86_64-linux-gnu', '-lgfortran', '-lm', '-lquadmath', '-lm'] Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.libraries/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -o /tmp/petsc-U9YCMv/config.libraries/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char ddot_(); int main() { ddot_() ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lf2cblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lf2cblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lf2cblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lf2cblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lf2cblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lf2cblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Possible ERROR while running linker: /usr/bin/ld: cannot find -lf2cblas collect2: error: ld returned 1 exit status /usr/bin/ld: cannot find -lf2cblas collect2: error: ld returned 1 exit status make: *** [all] Error 1 output: Debug: Moving these libraries to the end of the link line: -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lf2cblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lf2cblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lf2cblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lf2cblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt ret = 256 error message = {/usr/bin/ld: cannot find -lf2cblas collect2: error: ld returned 1 exit status /usr/bin/ld: cannot find -lf2cblas collect2: error: ld returned 1 exit status make: *** [all] Error 1 } Pushing language C Popping language C in tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lf2cblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char ddot_(); int main() { ddot_() ; return 0; } Popping language C Checking for no name mangling on BLAS/LAPACK Checking for function ddot in library ['/home/hills/seska/packages/fblaslapack/libf2cblas.a'] ['-Wl,-rpath,/home/hills/seska/packages/openmpi/lib', '-L/home/hills/seska/packages/openmpi/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib', '-L/home/hills/seska/packages/tau/x86_64/lib', '-Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7', '-L/usr/lib/gcc/x86_64-linux-gnu/4.7', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-Wl,-rpath,/usr/lib/x86_64-linux-gnu', '-L/usr/lib/x86_64-linux-gnu', '-Wl,-rpath,/lib/x86_64-linux-gnu', '-L/lib/x86_64-linux-gnu', '-lmpichf90', '-lgfortran', '-lm', '-Wl,-rpath,/home/hills/seska/packages/openmpi/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib', '-Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-Wl,-rpath,/usr/lib/x86_64-linux-gnu', '-Wl,-rpath,/lib/x86_64-linux-gnu', '-lgfortran', '-lm', '-lquadmath', '-lm'] Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.libraries/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -o /tmp/petsc-U9YCMv/config.libraries/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char ddot(); int main() { ddot() ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lf2cblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lf2cblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lf2cblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lf2cblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lf2cblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lf2cblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Possible ERROR while running linker: /usr/bin/ld: cannot find -lf2cblas collect2: error: ld returned 1 exit status /usr/bin/ld: cannot find -lf2cblas collect2: error: ld returned 1 exit status make: *** [all] Error 1 output: Debug: Moving these libraries to the end of the link line: -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lf2cblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lf2cblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lf2cblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lf2cblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt ret = 256 error message = {/usr/bin/ld: cannot find -lf2cblas collect2: error: ld returned 1 exit status /usr/bin/ld: cannot find -lf2cblas collect2: error: ld returned 1 exit status make: *** [all] Error 1 } Pushing language C Popping language C in tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lf2cblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char ddot(); int main() { ddot() ; return 0; } Popping language C Checking for function dgetrs in library ['/home/hills/seska/packages/fblaslapack/libf2clapack.a'] ['-Wl,-rpath,/home/hills/seska/packages/openmpi/lib', '-L/home/hills/seska/packages/openmpi/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib', '-L/home/hills/seska/packages/tau/x86_64/lib', '-Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7', '-L/usr/lib/gcc/x86_64-linux-gnu/4.7', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-Wl,-rpath,/usr/lib/x86_64-linux-gnu', '-L/usr/lib/x86_64-linux-gnu', '-Wl,-rpath,/lib/x86_64-linux-gnu', '-L/lib/x86_64-linux-gnu', '-lmpichf90', '-lgfortran', '-lm', '-Wl,-rpath,/home/hills/seska/packages/openmpi/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib', '-Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-Wl,-rpath,/usr/lib/x86_64-linux-gnu', '-Wl,-rpath,/lib/x86_64-linux-gnu', '-lgfortran', '-lm', '-lquadmath', '-lm'] Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.libraries/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -o /tmp/petsc-U9YCMv/config.libraries/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dgetrs(); int main() { dgetrs() ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lf2clapack -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lf2clapack -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lf2clapack -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lf2clapack -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lf2clapack -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lf2clapack -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Possible ERROR while running linker: /usr/bin/ld: cannot find -lf2clapack collect2: error: ld returned 1 exit status /usr/bin/ld: cannot find -lf2clapack collect2: error: ld returned 1 exit status make: *** [all] Error 1 output: Debug: Moving these libraries to the end of the link line: -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lf2clapack -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lf2clapack -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lf2clapack -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lf2clapack -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt ret = 256 error message = {/usr/bin/ld: cannot find -lf2clapack collect2: error: ld returned 1 exit status /usr/bin/ld: cannot find -lf2clapack collect2: error: ld returned 1 exit status make: *** [all] Error 1 } Pushing language C Popping language C in tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lf2clapack -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dgetrs(); int main() { dgetrs() ; return 0; } Popping language C Checking for function dgeev in library ['/home/hills/seska/packages/fblaslapack/libf2clapack.a'] ['-Wl,-rpath,/home/hills/seska/packages/openmpi/lib', '-L/home/hills/seska/packages/openmpi/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib', '-L/home/hills/seska/packages/tau/x86_64/lib', '-Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7', '-L/usr/lib/gcc/x86_64-linux-gnu/4.7', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-Wl,-rpath,/usr/lib/x86_64-linux-gnu', '-L/usr/lib/x86_64-linux-gnu', '-Wl,-rpath,/lib/x86_64-linux-gnu', '-L/lib/x86_64-linux-gnu', '-lmpichf90', '-lgfortran', '-lm', '-Wl,-rpath,/home/hills/seska/packages/openmpi/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib', '-Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-Wl,-rpath,/usr/lib/x86_64-linux-gnu', '-Wl,-rpath,/lib/x86_64-linux-gnu', '-lgfortran', '-lm', '-lquadmath', '-lm'] Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.libraries/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -o /tmp/petsc-U9YCMv/config.libraries/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dgeev(); int main() { dgeev() ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lf2clapack -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lf2clapack -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lf2clapack -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lf2clapack -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lf2clapack -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lf2clapack -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Possible ERROR while running linker: /usr/bin/ld: cannot find -lf2clapack collect2: error: ld returned 1 exit status /usr/bin/ld: cannot find -lf2clapack collect2: error: ld returned 1 exit status make: *** [all] Error 1 output: Debug: Moving these libraries to the end of the link line: -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lf2clapack -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lf2clapack -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lf2clapack -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lf2clapack -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt ret = 256 error message = {/usr/bin/ld: cannot find -lf2clapack collect2: error: ld returned 1 exit status /usr/bin/ld: cannot find -lf2clapack collect2: error: ld returned 1 exit status make: *** [all] Error 1 } Pushing language C Popping language C in tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lf2clapack -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dgeev(); int main() { dgeev() ; return 0; } Popping language C Checking for underscore name mangling on BLAS/LAPACK Checking for function ddot_ in library ['/home/hills/seska/packages/fblaslapack/libf2cblas.a'] ['-Wl,-rpath,/home/hills/seska/packages/openmpi/lib', '-L/home/hills/seska/packages/openmpi/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib', '-L/home/hills/seska/packages/tau/x86_64/lib', '-Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7', '-L/usr/lib/gcc/x86_64-linux-gnu/4.7', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-Wl,-rpath,/usr/lib/x86_64-linux-gnu', '-L/usr/lib/x86_64-linux-gnu', '-Wl,-rpath,/lib/x86_64-linux-gnu', '-L/lib/x86_64-linux-gnu', '-lmpichf90', '-lgfortran', '-lm', '-Wl,-rpath,/home/hills/seska/packages/openmpi/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib', '-Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-Wl,-rpath,/usr/lib/x86_64-linux-gnu', '-Wl,-rpath,/lib/x86_64-linux-gnu', '-lgfortran', '-lm', '-lquadmath', '-lm'] Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.libraries/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -o /tmp/petsc-U9YCMv/config.libraries/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char ddot_(); int main() { ddot_() ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lf2cblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lf2cblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lf2cblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lf2cblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lf2cblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lf2cblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Possible ERROR while running linker: /usr/bin/ld: cannot find -lf2cblas collect2: error: ld returned 1 exit status /usr/bin/ld: cannot find -lf2cblas collect2: error: ld returned 1 exit status make: *** [all] Error 1 output: Debug: Moving these libraries to the end of the link line: -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lf2cblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lf2cblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lf2cblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lf2cblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt ret = 256 error message = {/usr/bin/ld: cannot find -lf2cblas collect2: error: ld returned 1 exit status /usr/bin/ld: cannot find -lf2cblas collect2: error: ld returned 1 exit status make: *** [all] Error 1 } Pushing language C Popping language C in tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lf2cblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char ddot_(); int main() { ddot_() ; return 0; } Popping language C Checking for function dgetrs_ in library ['/home/hills/seska/packages/fblaslapack/libf2clapack.a'] ['-Wl,-rpath,/home/hills/seska/packages/openmpi/lib', '-L/home/hills/seska/packages/openmpi/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib', '-L/home/hills/seska/packages/tau/x86_64/lib', '-Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7', '-L/usr/lib/gcc/x86_64-linux-gnu/4.7', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-Wl,-rpath,/usr/lib/x86_64-linux-gnu', '-L/usr/lib/x86_64-linux-gnu', '-Wl,-rpath,/lib/x86_64-linux-gnu', '-L/lib/x86_64-linux-gnu', '-lmpichf90', '-lgfortran', '-lm', '-Wl,-rpath,/home/hills/seska/packages/openmpi/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib', '-Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-Wl,-rpath,/usr/lib/x86_64-linux-gnu', '-Wl,-rpath,/lib/x86_64-linux-gnu', '-lgfortran', '-lm', '-lquadmath', '-lm'] Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.libraries/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -o /tmp/petsc-U9YCMv/config.libraries/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dgetrs_(); int main() { dgetrs_() ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lf2clapack -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lf2clapack -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lf2clapack -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lf2clapack -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lf2clapack -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lf2clapack -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Possible ERROR while running linker: /usr/bin/ld: cannot find -lf2clapack collect2: error: ld returned 1 exit status /usr/bin/ld: cannot find -lf2clapack collect2: error: ld returned 1 exit status make: *** [all] Error 1 output: Debug: Moving these libraries to the end of the link line: -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lf2clapack -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lf2clapack -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lf2clapack -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lf2clapack -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt ret = 256 error message = {/usr/bin/ld: cannot find -lf2clapack collect2: error: ld returned 1 exit status /usr/bin/ld: cannot find -lf2clapack collect2: error: ld returned 1 exit status make: *** [all] Error 1 } Pushing language C Popping language C in tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lf2clapack -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dgetrs_(); int main() { dgetrs_() ; return 0; } Popping language C Checking for function dgeev_ in library ['/home/hills/seska/packages/fblaslapack/libf2clapack.a'] ['-Wl,-rpath,/home/hills/seska/packages/openmpi/lib', '-L/home/hills/seska/packages/openmpi/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib', '-L/home/hills/seska/packages/tau/x86_64/lib', '-Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7', '-L/usr/lib/gcc/x86_64-linux-gnu/4.7', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-Wl,-rpath,/usr/lib/x86_64-linux-gnu', '-L/usr/lib/x86_64-linux-gnu', '-Wl,-rpath,/lib/x86_64-linux-gnu', '-L/lib/x86_64-linux-gnu', '-lmpichf90', '-lgfortran', '-lm', '-Wl,-rpath,/home/hills/seska/packages/openmpi/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib', '-Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-Wl,-rpath,/usr/lib/x86_64-linux-gnu', '-Wl,-rpath,/lib/x86_64-linux-gnu', '-lgfortran', '-lm', '-lquadmath', '-lm'] Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.libraries/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -o /tmp/petsc-U9YCMv/config.libraries/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dgeev_(); int main() { dgeev_() ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lf2clapack -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lf2clapack -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lf2clapack -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lf2clapack -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lf2clapack -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lf2clapack -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Possible ERROR while running linker: /usr/bin/ld: cannot find -lf2clapack collect2: error: ld returned 1 exit status /usr/bin/ld: cannot find -lf2clapack collect2: error: ld returned 1 exit status make: *** [all] Error 1 output: Debug: Moving these libraries to the end of the link line: -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lf2clapack -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lf2clapack -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lf2clapack -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lf2clapack -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt ret = 256 error message = {/usr/bin/ld: cannot find -lf2clapack collect2: error: ld returned 1 exit status /usr/bin/ld: cannot find -lf2clapack collect2: error: ld returned 1 exit status make: *** [all] Error 1 } Pushing language C Popping language C in tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lf2clapack -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dgeev_(); int main() { dgeev_() ; return 0; } Popping language C Checking for function df2cblaslapack311_id in library ['/home/hills/seska/packages/fblaslapack/libf2cblas.a'] ['-Wl,-rpath,/home/hills/seska/packages/openmpi/lib', '-L/home/hills/seska/packages/openmpi/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib', '-L/home/hills/seska/packages/tau/x86_64/lib', '-Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7', '-L/usr/lib/gcc/x86_64-linux-gnu/4.7', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-Wl,-rpath,/usr/lib/x86_64-linux-gnu', '-L/usr/lib/x86_64-linux-gnu', '-Wl,-rpath,/lib/x86_64-linux-gnu', '-L/lib/x86_64-linux-gnu', '-lmpichf90', '-lgfortran', '-lm', '-Wl,-rpath,/home/hills/seska/packages/openmpi/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib', '-Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-Wl,-rpath,/usr/lib/x86_64-linux-gnu', '-Wl,-rpath,/lib/x86_64-linux-gnu', '-lgfortran', '-lm', '-lquadmath', '-lm'] Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.libraries/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -o /tmp/petsc-U9YCMv/config.libraries/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char df2cblaslapack311_id(); int main() { df2cblaslapack311_id() ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lf2cblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lf2cblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lf2cblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lf2cblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lf2cblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lf2cblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Possible ERROR while running linker: /usr/bin/ld: cannot find -lf2cblas collect2: error: ld returned 1 exit status /usr/bin/ld: cannot find -lf2cblas collect2: error: ld returned 1 exit status make: *** [all] Error 1 output: Debug: Moving these libraries to the end of the link line: -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lf2cblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lf2cblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lf2cblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lf2cblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt ret = 256 error message = {/usr/bin/ld: cannot find -lf2cblas collect2: error: ld returned 1 exit status /usr/bin/ld: cannot find -lf2cblas collect2: error: ld returned 1 exit status make: *** [all] Error 1 } Pushing language C Popping language C in tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lf2cblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char df2cblaslapack311_id(); int main() { df2cblaslapack311_id() ; return 0; } Popping language C ================================================================================ Checking for a functional BLAS and LAPACK in User specified installation root ================================================================================ TEST checkLib from config.packages.BlasLapack(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/packages/BlasLapack.py:113) TESTING: checkLib from config.packages.BlasLapack(config/BuildSystem/config/packages/BlasLapack.py:113) Checking for BLAS and LAPACK symbols Checking for function ddot_ in library ['/home/hills/seska/packages/fblaslapack/libfblas.a'] ['-Wl,-rpath,/home/hills/seska/packages/openmpi/lib', '-L/home/hills/seska/packages/openmpi/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib', '-L/home/hills/seska/packages/tau/x86_64/lib', '-Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7', '-L/usr/lib/gcc/x86_64-linux-gnu/4.7', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-Wl,-rpath,/usr/lib/x86_64-linux-gnu', '-L/usr/lib/x86_64-linux-gnu', '-Wl,-rpath,/lib/x86_64-linux-gnu', '-L/lib/x86_64-linux-gnu', '-lmpichf90', '-lgfortran', '-lm', '-Wl,-rpath,/home/hills/seska/packages/openmpi/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib', '-Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-Wl,-rpath,/usr/lib/x86_64-linux-gnu', '-Wl,-rpath,/lib/x86_64-linux-gnu', '-lgfortran', '-lm', '-lquadmath', '-lm'] Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.libraries/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -o /tmp/petsc-U9YCMv/config.libraries/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char ddot_(); int main() { ddot_() ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lfblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lfblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lfblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Defined "HAVE_LIBFBLAS" to "1" Popping language C Checking for function dgetrs_ in library ['/home/hills/seska/packages/fblaslapack/libflapack.a'] ['/home/hills/seska/packages/fblaslapack/libfblas.a', '-Wl,-rpath,/home/hills/seska/packages/openmpi/lib', '-L/home/hills/seska/packages/openmpi/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib', '-L/home/hills/seska/packages/tau/x86_64/lib', '-Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7', '-L/usr/lib/gcc/x86_64-linux-gnu/4.7', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-Wl,-rpath,/usr/lib/x86_64-linux-gnu', '-L/usr/lib/x86_64-linux-gnu', '-Wl,-rpath,/lib/x86_64-linux-gnu', '-L/lib/x86_64-linux-gnu', '-lmpichf90', '-lgfortran', '-lm', '-Wl,-rpath,/home/hills/seska/packages/openmpi/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib', '-Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-Wl,-rpath,/usr/lib/x86_64-linux-gnu', '-Wl,-rpath,/lib/x86_64-linux-gnu', '-lgfortran', '-lm', '-lquadmath', '-lm'] Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.libraries/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -o /tmp/petsc-U9YCMv/config.libraries/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dgetrs_(); int main() { dgetrs_() ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lflapack -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lfblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lflapack -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lfblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lflapack -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lfblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Defined "HAVE_LIBFLAPACK" to "1" Popping language C Found Fortran mangling on BLAS/LAPACK which is underscore Checking for function df2cblaslapack311_id in library ['/home/hills/seska/packages/fblaslapack/libfblas.a'] ['/home/hills/seska/packages/fblaslapack/libfblas.a', '-Wl,-rpath,/home/hills/seska/packages/openmpi/lib', '-L/home/hills/seska/packages/openmpi/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib', '-L/home/hills/seska/packages/tau/x86_64/lib', '-Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7', '-L/usr/lib/gcc/x86_64-linux-gnu/4.7', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-Wl,-rpath,/usr/lib/x86_64-linux-gnu', '-L/usr/lib/x86_64-linux-gnu', '-Wl,-rpath,/lib/x86_64-linux-gnu', '-L/lib/x86_64-linux-gnu', '-lmpichf90', '-lgfortran', '-lm', '-Wl,-rpath,/home/hills/seska/packages/openmpi/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib', '-Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-Wl,-rpath,/usr/lib/x86_64-linux-gnu', '-Wl,-rpath,/lib/x86_64-linux-gnu', '-lgfortran', '-lm', '-lquadmath', '-lm'] Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.libraries/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -o /tmp/petsc-U9YCMv/config.libraries/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char df2cblaslapack311_id(); int main() { df2cblaslapack311_id() ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lfblas -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lfblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lfblas -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lfblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lfblas -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lfblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lfblas -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lfblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lfblas -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lfblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lfblas -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lfblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Possible ERROR while running linker: /tmp/petsc-U9YCMv/config.libraries/conftest.o: In function `main': /tmp/petsc-U9YCMv/config.libraries/conftest.c:7: undefined reference to `df2cblaslapack311_id' collect2: error: ld returned 1 exit status /tmp/petsc-U9YCMv/config.libraries/conftest.o: In function `main': /tmp/petsc-U9YCMv/config.libraries/conftest.c:7: undefined reference to `df2cblaslapack311_id' collect2: error: ld returned 1 exit status make: *** [all] Error 1 output: Debug: Moving these libraries to the end of the link line: -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lfblas -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lfblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lfblas -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lfblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lfblas -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lfblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lfblas -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lfblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt ret = 256 error message = {/tmp/petsc-U9YCMv/config.libraries/conftest.o: In function `main': /tmp/petsc-U9YCMv/config.libraries/conftest.c:7: undefined reference to `df2cblaslapack311_id' collect2: error: ld returned 1 exit status /tmp/petsc-U9YCMv/config.libraries/conftest.o: In function `main': /tmp/petsc-U9YCMv/config.libraries/conftest.c:7: undefined reference to `df2cblaslapack311_id' collect2: error: ld returned 1 exit status make: *** [all] Error 1 } Pushing language C Popping language C in tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lfblas -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lfblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char df2cblaslapack311_id(); int main() { df2cblaslapack311_id() ; return 0; } Popping language C Defined "BLASLAPACK_UNDERSCORE" to "1" ================================================================================ TEST check64BitBLASIndices from config.packages.BlasLapack(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/packages/BlasLapack.py:554) TESTING: check64BitBLASIndices from config.packages.BlasLapack(config/BuildSystem/config/packages/BlasLapack.py:554) Check for and use 64bit integer blas ================================================================================ TEST checkESSL from config.packages.BlasLapack(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/packages/BlasLapack.py:500) TESTING: checkESSL from config.packages.BlasLapack(config/BuildSystem/config/packages/BlasLapack.py:500) Check for the IBM ESSL library Checking for function iessl in library ['/home/hills/seska/packages/fblaslapack/libflapack.a'] [] Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.libraries/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -o /tmp/petsc-U9YCMv/config.libraries/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char iessl(); int main() { iessl() ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lflapack -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lflapack -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lflapack -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lflapack -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lflapack -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lflapack -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Possible ERROR while running linker: /tmp/petsc-U9YCMv/config.libraries/conftest.o: In function `main': /tmp/petsc-U9YCMv/config.libraries/conftest.c:7: undefined reference to `iessl' collect2: error: ld returned 1 exit status /tmp/petsc-U9YCMv/config.libraries/conftest.o: In function `main': /tmp/petsc-U9YCMv/config.libraries/conftest.c:7: undefined reference to `iessl' collect2: error: ld returned 1 exit status make: *** [all] Error 1 output: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lflapack -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lflapack -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lflapack -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lflapack -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt ret = 256 error message = {/tmp/petsc-U9YCMv/config.libraries/conftest.o: In function `main': /tmp/petsc-U9YCMv/config.libraries/conftest.c:7: undefined reference to `iessl' collect2: error: ld returned 1 exit status /tmp/petsc-U9YCMv/config.libraries/conftest.o: In function `main': /tmp/petsc-U9YCMv/config.libraries/conftest.c:7: undefined reference to `iessl' collect2: error: ld returned 1 exit status make: *** [all] Error 1 } Pushing language C Popping language C in tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lflapack -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char iessl(); int main() { iessl() ; return 0; } Popping language C ================================================================================ TEST checkPESSL from config.packages.BlasLapack(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/packages/BlasLapack.py:506) TESTING: checkPESSL from config.packages.BlasLapack(config/BuildSystem/config/packages/BlasLapack.py:506) Check for the IBM PESSL library - and error out - if used instead of ESSL Checking for function ipessl in library ['/home/hills/seska/packages/fblaslapack/libflapack.a'] [] Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.libraries/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -o /tmp/petsc-U9YCMv/config.libraries/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char ipessl(); int main() { ipessl() ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lflapack -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lflapack -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lflapack -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lflapack -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lflapack -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lflapack -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Possible ERROR while running linker: /tmp/petsc-U9YCMv/config.libraries/conftest.o: In function `main': /tmp/petsc-U9YCMv/config.libraries/conftest.c:7: undefined reference to `ipessl' collect2: error: ld returned 1 exit status /tmp/petsc-U9YCMv/config.libraries/conftest.o: In function `main': /tmp/petsc-U9YCMv/config.libraries/conftest.c:7: undefined reference to `ipessl' collect2: error: ld returned 1 exit status make: *** [all] Error 1 output: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lflapack -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lflapack -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lflapack -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lflapack -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt ret = 256 error message = {/tmp/petsc-U9YCMv/config.libraries/conftest.o: In function `main': /tmp/petsc-U9YCMv/config.libraries/conftest.c:7: undefined reference to `ipessl' collect2: error: ld returned 1 exit status /tmp/petsc-U9YCMv/config.libraries/conftest.o: In function `main': /tmp/petsc-U9YCMv/config.libraries/conftest.c:7: undefined reference to `ipessl' collect2: error: ld returned 1 exit status make: *** [all] Error 1 } Pushing language C Popping language C in tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lflapack -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char ipessl(); int main() { ipessl() ; return 0; } Popping language C ================================================================================ TEST checkMissing from config.packages.BlasLapack(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/packages/BlasLapack.py:512) TESTING: checkMissing from config.packages.BlasLapack(config/BuildSystem/config/packages/BlasLapack.py:512) Check for missing LAPACK routines Checking for function dtrsen_ in library ['/home/hills/seska/packages/fblaslapack/libflapack.a'] ['/home/hills/seska/packages/fblaslapack/libfblas.a', '-Wl,-rpath,/home/hills/seska/packages/openmpi/lib', '-L/home/hills/seska/packages/openmpi/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib', '-L/home/hills/seska/packages/tau/x86_64/lib', '-Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7', '-L/usr/lib/gcc/x86_64-linux-gnu/4.7', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-Wl,-rpath,/usr/lib/x86_64-linux-gnu', '-L/usr/lib/x86_64-linux-gnu', '-Wl,-rpath,/lib/x86_64-linux-gnu', '-L/lib/x86_64-linux-gnu', '-lmpichf90', '-lgfortran', '-lm', '-Wl,-rpath,/home/hills/seska/packages/openmpi/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib', '-Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-Wl,-rpath,/usr/lib/x86_64-linux-gnu', '-Wl,-rpath,/lib/x86_64-linux-gnu', '-lgfortran', '-lm', '-lquadmath', '-lm'] Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.libraries/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -o /tmp/petsc-U9YCMv/config.libraries/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dtrsen_(); int main() { dtrsen_() ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lflapack -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lfblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lflapack -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lfblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lflapack -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lfblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Defined "HAVE_LIBFLAPACK" to "1" Popping language C Checking for function dgerfs_ in library ['/home/hills/seska/packages/fblaslapack/libflapack.a'] ['/home/hills/seska/packages/fblaslapack/libfblas.a', '-Wl,-rpath,/home/hills/seska/packages/openmpi/lib', '-L/home/hills/seska/packages/openmpi/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib', '-L/home/hills/seska/packages/tau/x86_64/lib', '-Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7', '-L/usr/lib/gcc/x86_64-linux-gnu/4.7', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-Wl,-rpath,/usr/lib/x86_64-linux-gnu', '-L/usr/lib/x86_64-linux-gnu', '-Wl,-rpath,/lib/x86_64-linux-gnu', '-L/lib/x86_64-linux-gnu', '-lmpichf90', '-lgfortran', '-lm', '-Wl,-rpath,/home/hills/seska/packages/openmpi/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib', '-Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-Wl,-rpath,/usr/lib/x86_64-linux-gnu', '-Wl,-rpath,/lib/x86_64-linux-gnu', '-lgfortran', '-lm', '-lquadmath', '-lm'] Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.libraries/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -o /tmp/petsc-U9YCMv/config.libraries/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dgerfs_(); int main() { dgerfs_() ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lflapack -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lfblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lflapack -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lfblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lflapack -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lfblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Defined "HAVE_LIBFLAPACK" to "1" Popping language C Checking for function dgges_ in library ['/home/hills/seska/packages/fblaslapack/libflapack.a'] ['/home/hills/seska/packages/fblaslapack/libfblas.a', '-Wl,-rpath,/home/hills/seska/packages/openmpi/lib', '-L/home/hills/seska/packages/openmpi/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib', '-L/home/hills/seska/packages/tau/x86_64/lib', '-Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7', '-L/usr/lib/gcc/x86_64-linux-gnu/4.7', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-Wl,-rpath,/usr/lib/x86_64-linux-gnu', '-L/usr/lib/x86_64-linux-gnu', '-Wl,-rpath,/lib/x86_64-linux-gnu', '-L/lib/x86_64-linux-gnu', '-lmpichf90', '-lgfortran', '-lm', '-Wl,-rpath,/home/hills/seska/packages/openmpi/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib', '-Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-Wl,-rpath,/usr/lib/x86_64-linux-gnu', '-Wl,-rpath,/lib/x86_64-linux-gnu', '-lgfortran', '-lm', '-lquadmath', '-lm'] Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.libraries/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -o /tmp/petsc-U9YCMv/config.libraries/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dgges_(); int main() { dgges_() ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lflapack -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lfblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lflapack -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lfblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lflapack -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lfblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Defined "HAVE_LIBFLAPACK" to "1" Popping language C Checking for function dtgsen_ in library ['/home/hills/seska/packages/fblaslapack/libflapack.a'] ['/home/hills/seska/packages/fblaslapack/libfblas.a', '-Wl,-rpath,/home/hills/seska/packages/openmpi/lib', '-L/home/hills/seska/packages/openmpi/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib', '-L/home/hills/seska/packages/tau/x86_64/lib', '-Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7', '-L/usr/lib/gcc/x86_64-linux-gnu/4.7', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-Wl,-rpath,/usr/lib/x86_64-linux-gnu', '-L/usr/lib/x86_64-linux-gnu', '-Wl,-rpath,/lib/x86_64-linux-gnu', '-L/lib/x86_64-linux-gnu', '-lmpichf90', '-lgfortran', '-lm', '-Wl,-rpath,/home/hills/seska/packages/openmpi/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib', '-Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-Wl,-rpath,/usr/lib/x86_64-linux-gnu', '-Wl,-rpath,/lib/x86_64-linux-gnu', '-lgfortran', '-lm', '-lquadmath', '-lm'] Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.libraries/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -o /tmp/petsc-U9YCMv/config.libraries/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dtgsen_(); int main() { dtgsen_() ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lflapack -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lfblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lflapack -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lfblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lflapack -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lfblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Defined "HAVE_LIBFLAPACK" to "1" Popping language C Checking for function dgesvd_ in library ['/home/hills/seska/packages/fblaslapack/libflapack.a'] ['/home/hills/seska/packages/fblaslapack/libfblas.a', '-Wl,-rpath,/home/hills/seska/packages/openmpi/lib', '-L/home/hills/seska/packages/openmpi/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib', '-L/home/hills/seska/packages/tau/x86_64/lib', '-Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7', '-L/usr/lib/gcc/x86_64-linux-gnu/4.7', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-Wl,-rpath,/usr/lib/x86_64-linux-gnu', '-L/usr/lib/x86_64-linux-gnu', '-Wl,-rpath,/lib/x86_64-linux-gnu', '-L/lib/x86_64-linux-gnu', '-lmpichf90', '-lgfortran', '-lm', '-Wl,-rpath,/home/hills/seska/packages/openmpi/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib', '-Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-Wl,-rpath,/usr/lib/x86_64-linux-gnu', '-Wl,-rpath,/lib/x86_64-linux-gnu', '-lgfortran', '-lm', '-lquadmath', '-lm'] Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.libraries/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -o /tmp/petsc-U9YCMv/config.libraries/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dgesvd_(); int main() { dgesvd_() ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lflapack -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lfblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lflapack -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lfblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lflapack -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lfblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Defined "HAVE_LIBFLAPACK" to "1" Popping language C Checking for function dgetrf_ in library ['/home/hills/seska/packages/fblaslapack/libflapack.a'] ['/home/hills/seska/packages/fblaslapack/libfblas.a', '-Wl,-rpath,/home/hills/seska/packages/openmpi/lib', '-L/home/hills/seska/packages/openmpi/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib', '-L/home/hills/seska/packages/tau/x86_64/lib', '-Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7', '-L/usr/lib/gcc/x86_64-linux-gnu/4.7', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-Wl,-rpath,/usr/lib/x86_64-linux-gnu', '-L/usr/lib/x86_64-linux-gnu', '-Wl,-rpath,/lib/x86_64-linux-gnu', '-L/lib/x86_64-linux-gnu', '-lmpichf90', '-lgfortran', '-lm', '-Wl,-rpath,/home/hills/seska/packages/openmpi/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib', '-Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-Wl,-rpath,/usr/lib/x86_64-linux-gnu', '-Wl,-rpath,/lib/x86_64-linux-gnu', '-lgfortran', '-lm', '-lquadmath', '-lm'] Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.libraries/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -o /tmp/petsc-U9YCMv/config.libraries/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dgetrf_(); int main() { dgetrf_() ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lflapack -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lfblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lflapack -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lfblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lflapack -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lfblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Defined "HAVE_LIBFLAPACK" to "1" Popping language C Checking for function dgetrs_ in library ['/home/hills/seska/packages/fblaslapack/libflapack.a'] ['/home/hills/seska/packages/fblaslapack/libfblas.a', '-Wl,-rpath,/home/hills/seska/packages/openmpi/lib', '-L/home/hills/seska/packages/openmpi/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib', '-L/home/hills/seska/packages/tau/x86_64/lib', '-Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7', '-L/usr/lib/gcc/x86_64-linux-gnu/4.7', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-Wl,-rpath,/usr/lib/x86_64-linux-gnu', '-L/usr/lib/x86_64-linux-gnu', '-Wl,-rpath,/lib/x86_64-linux-gnu', '-L/lib/x86_64-linux-gnu', '-lmpichf90', '-lgfortran', '-lm', '-Wl,-rpath,/home/hills/seska/packages/openmpi/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib', '-Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-Wl,-rpath,/usr/lib/x86_64-linux-gnu', '-Wl,-rpath,/lib/x86_64-linux-gnu', '-lgfortran', '-lm', '-lquadmath', '-lm'] Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.libraries/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -o /tmp/petsc-U9YCMv/config.libraries/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dgetrs_(); int main() { dgetrs_() ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lflapack -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lfblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lflapack -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lfblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lflapack -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lfblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Defined "HAVE_LIBFLAPACK" to "1" Popping language C Checking for function dgeev_ in library ['/home/hills/seska/packages/fblaslapack/libflapack.a'] ['/home/hills/seska/packages/fblaslapack/libfblas.a', '-Wl,-rpath,/home/hills/seska/packages/openmpi/lib', '-L/home/hills/seska/packages/openmpi/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib', '-L/home/hills/seska/packages/tau/x86_64/lib', '-Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7', '-L/usr/lib/gcc/x86_64-linux-gnu/4.7', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-Wl,-rpath,/usr/lib/x86_64-linux-gnu', '-L/usr/lib/x86_64-linux-gnu', '-Wl,-rpath,/lib/x86_64-linux-gnu', '-L/lib/x86_64-linux-gnu', '-lmpichf90', '-lgfortran', '-lm', '-Wl,-rpath,/home/hills/seska/packages/openmpi/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib', '-Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-Wl,-rpath,/usr/lib/x86_64-linux-gnu', '-Wl,-rpath,/lib/x86_64-linux-gnu', '-lgfortran', '-lm', '-lquadmath', '-lm'] Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.libraries/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -o /tmp/petsc-U9YCMv/config.libraries/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dgeev_(); int main() { dgeev_() ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lflapack -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lfblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lflapack -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lfblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lflapack -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lfblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Defined "HAVE_LIBFLAPACK" to "1" Popping language C Checking for function dgelss_ in library ['/home/hills/seska/packages/fblaslapack/libflapack.a'] ['/home/hills/seska/packages/fblaslapack/libfblas.a', '-Wl,-rpath,/home/hills/seska/packages/openmpi/lib', '-L/home/hills/seska/packages/openmpi/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib', '-L/home/hills/seska/packages/tau/x86_64/lib', '-Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7', '-L/usr/lib/gcc/x86_64-linux-gnu/4.7', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-Wl,-rpath,/usr/lib/x86_64-linux-gnu', '-L/usr/lib/x86_64-linux-gnu', '-Wl,-rpath,/lib/x86_64-linux-gnu', '-L/lib/x86_64-linux-gnu', '-lmpichf90', '-lgfortran', '-lm', '-Wl,-rpath,/home/hills/seska/packages/openmpi/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib', '-Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-Wl,-rpath,/usr/lib/x86_64-linux-gnu', '-Wl,-rpath,/lib/x86_64-linux-gnu', '-lgfortran', '-lm', '-lquadmath', '-lm'] Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.libraries/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -o /tmp/petsc-U9YCMv/config.libraries/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dgelss_(); int main() { dgelss_() ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lflapack -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lfblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lflapack -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lfblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lflapack -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lfblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Defined "HAVE_LIBFLAPACK" to "1" Popping language C Checking for function dsyev_ in library ['/home/hills/seska/packages/fblaslapack/libflapack.a'] ['/home/hills/seska/packages/fblaslapack/libfblas.a', '-Wl,-rpath,/home/hills/seska/packages/openmpi/lib', '-L/home/hills/seska/packages/openmpi/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib', '-L/home/hills/seska/packages/tau/x86_64/lib', '-Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7', '-L/usr/lib/gcc/x86_64-linux-gnu/4.7', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-Wl,-rpath,/usr/lib/x86_64-linux-gnu', '-L/usr/lib/x86_64-linux-gnu', '-Wl,-rpath,/lib/x86_64-linux-gnu', '-L/lib/x86_64-linux-gnu', '-lmpichf90', '-lgfortran', '-lm', '-Wl,-rpath,/home/hills/seska/packages/openmpi/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib', '-Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-Wl,-rpath,/usr/lib/x86_64-linux-gnu', '-Wl,-rpath,/lib/x86_64-linux-gnu', '-lgfortran', '-lm', '-lquadmath', '-lm'] Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.libraries/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -o /tmp/petsc-U9YCMv/config.libraries/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dsyev_(); int main() { dsyev_() ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lflapack -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lfblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lflapack -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lfblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lflapack -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lfblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Defined "HAVE_LIBFLAPACK" to "1" Popping language C Checking for function dsyevx_ in library ['/home/hills/seska/packages/fblaslapack/libflapack.a'] ['/home/hills/seska/packages/fblaslapack/libfblas.a', '-Wl,-rpath,/home/hills/seska/packages/openmpi/lib', '-L/home/hills/seska/packages/openmpi/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib', '-L/home/hills/seska/packages/tau/x86_64/lib', '-Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7', '-L/usr/lib/gcc/x86_64-linux-gnu/4.7', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-Wl,-rpath,/usr/lib/x86_64-linux-gnu', '-L/usr/lib/x86_64-linux-gnu', '-Wl,-rpath,/lib/x86_64-linux-gnu', '-L/lib/x86_64-linux-gnu', '-lmpichf90', '-lgfortran', '-lm', '-Wl,-rpath,/home/hills/seska/packages/openmpi/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib', '-Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-Wl,-rpath,/usr/lib/x86_64-linux-gnu', '-Wl,-rpath,/lib/x86_64-linux-gnu', '-lgfortran', '-lm', '-lquadmath', '-lm'] Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.libraries/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -o /tmp/petsc-U9YCMv/config.libraries/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dsyevx_(); int main() { dsyevx_() ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lflapack -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lfblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lflapack -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lfblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lflapack -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lfblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Defined "HAVE_LIBFLAPACK" to "1" Popping language C Checking for function dsygv_ in library ['/home/hills/seska/packages/fblaslapack/libflapack.a'] ['/home/hills/seska/packages/fblaslapack/libfblas.a', '-Wl,-rpath,/home/hills/seska/packages/openmpi/lib', '-L/home/hills/seska/packages/openmpi/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib', '-L/home/hills/seska/packages/tau/x86_64/lib', '-Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7', '-L/usr/lib/gcc/x86_64-linux-gnu/4.7', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-Wl,-rpath,/usr/lib/x86_64-linux-gnu', '-L/usr/lib/x86_64-linux-gnu', '-Wl,-rpath,/lib/x86_64-linux-gnu', '-L/lib/x86_64-linux-gnu', '-lmpichf90', '-lgfortran', '-lm', '-Wl,-rpath,/home/hills/seska/packages/openmpi/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib', '-Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-Wl,-rpath,/usr/lib/x86_64-linux-gnu', '-Wl,-rpath,/lib/x86_64-linux-gnu', '-lgfortran', '-lm', '-lquadmath', '-lm'] Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.libraries/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -o /tmp/petsc-U9YCMv/config.libraries/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dsygv_(); int main() { dsygv_() ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lflapack -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lfblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lflapack -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lfblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lflapack -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lfblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Defined "HAVE_LIBFLAPACK" to "1" Popping language C Checking for function dsygvx_ in library ['/home/hills/seska/packages/fblaslapack/libflapack.a'] ['/home/hills/seska/packages/fblaslapack/libfblas.a', '-Wl,-rpath,/home/hills/seska/packages/openmpi/lib', '-L/home/hills/seska/packages/openmpi/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib', '-L/home/hills/seska/packages/tau/x86_64/lib', '-Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7', '-L/usr/lib/gcc/x86_64-linux-gnu/4.7', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-Wl,-rpath,/usr/lib/x86_64-linux-gnu', '-L/usr/lib/x86_64-linux-gnu', '-Wl,-rpath,/lib/x86_64-linux-gnu', '-L/lib/x86_64-linux-gnu', '-lmpichf90', '-lgfortran', '-lm', '-Wl,-rpath,/home/hills/seska/packages/openmpi/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib', '-Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-Wl,-rpath,/usr/lib/x86_64-linux-gnu', '-Wl,-rpath,/lib/x86_64-linux-gnu', '-lgfortran', '-lm', '-lquadmath', '-lm'] Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.libraries/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -o /tmp/petsc-U9YCMv/config.libraries/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dsygvx_(); int main() { dsygvx_() ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lflapack -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lfblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lflapack -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lfblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lflapack -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lfblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Defined "HAVE_LIBFLAPACK" to "1" Popping language C Checking for function dpotrf_ in library ['/home/hills/seska/packages/fblaslapack/libflapack.a'] ['/home/hills/seska/packages/fblaslapack/libfblas.a', '-Wl,-rpath,/home/hills/seska/packages/openmpi/lib', '-L/home/hills/seska/packages/openmpi/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib', '-L/home/hills/seska/packages/tau/x86_64/lib', '-Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7', '-L/usr/lib/gcc/x86_64-linux-gnu/4.7', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-Wl,-rpath,/usr/lib/x86_64-linux-gnu', '-L/usr/lib/x86_64-linux-gnu', '-Wl,-rpath,/lib/x86_64-linux-gnu', '-L/lib/x86_64-linux-gnu', '-lmpichf90', '-lgfortran', '-lm', '-Wl,-rpath,/home/hills/seska/packages/openmpi/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib', '-Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-Wl,-rpath,/usr/lib/x86_64-linux-gnu', '-Wl,-rpath,/lib/x86_64-linux-gnu', '-lgfortran', '-lm', '-lquadmath', '-lm'] Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.libraries/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -o /tmp/petsc-U9YCMv/config.libraries/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dpotrf_(); int main() { dpotrf_() ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lflapack -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lfblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lflapack -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lfblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lflapack -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lfblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Defined "HAVE_LIBFLAPACK" to "1" Popping language C Checking for function dpotrs_ in library ['/home/hills/seska/packages/fblaslapack/libflapack.a'] ['/home/hills/seska/packages/fblaslapack/libfblas.a', '-Wl,-rpath,/home/hills/seska/packages/openmpi/lib', '-L/home/hills/seska/packages/openmpi/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib', '-L/home/hills/seska/packages/tau/x86_64/lib', '-Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7', '-L/usr/lib/gcc/x86_64-linux-gnu/4.7', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-Wl,-rpath,/usr/lib/x86_64-linux-gnu', '-L/usr/lib/x86_64-linux-gnu', '-Wl,-rpath,/lib/x86_64-linux-gnu', '-L/lib/x86_64-linux-gnu', '-lmpichf90', '-lgfortran', '-lm', '-Wl,-rpath,/home/hills/seska/packages/openmpi/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib', '-Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-Wl,-rpath,/usr/lib/x86_64-linux-gnu', '-Wl,-rpath,/lib/x86_64-linux-gnu', '-lgfortran', '-lm', '-lquadmath', '-lm'] Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.libraries/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -o /tmp/petsc-U9YCMv/config.libraries/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dpotrs_(); int main() { dpotrs_() ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lflapack -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lfblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lflapack -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lfblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lflapack -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lfblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Defined "HAVE_LIBFLAPACK" to "1" Popping language C Checking for function dstebz_ in library ['/home/hills/seska/packages/fblaslapack/libflapack.a'] ['/home/hills/seska/packages/fblaslapack/libfblas.a', '-Wl,-rpath,/home/hills/seska/packages/openmpi/lib', '-L/home/hills/seska/packages/openmpi/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib', '-L/home/hills/seska/packages/tau/x86_64/lib', '-Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7', '-L/usr/lib/gcc/x86_64-linux-gnu/4.7', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-Wl,-rpath,/usr/lib/x86_64-linux-gnu', '-L/usr/lib/x86_64-linux-gnu', '-Wl,-rpath,/lib/x86_64-linux-gnu', '-L/lib/x86_64-linux-gnu', '-lmpichf90', '-lgfortran', '-lm', '-Wl,-rpath,/home/hills/seska/packages/openmpi/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib', '-Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-Wl,-rpath,/usr/lib/x86_64-linux-gnu', '-Wl,-rpath,/lib/x86_64-linux-gnu', '-lgfortran', '-lm', '-lquadmath', '-lm'] Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.libraries/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -o /tmp/petsc-U9YCMv/config.libraries/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dstebz_(); int main() { dstebz_() ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lflapack -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lfblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lflapack -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lfblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lflapack -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lfblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Defined "HAVE_LIBFLAPACK" to "1" Popping language C Checking for function dpttrf_ in library ['/home/hills/seska/packages/fblaslapack/libflapack.a'] ['/home/hills/seska/packages/fblaslapack/libfblas.a', '-Wl,-rpath,/home/hills/seska/packages/openmpi/lib', '-L/home/hills/seska/packages/openmpi/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib', '-L/home/hills/seska/packages/tau/x86_64/lib', '-Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7', '-L/usr/lib/gcc/x86_64-linux-gnu/4.7', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-Wl,-rpath,/usr/lib/x86_64-linux-gnu', '-L/usr/lib/x86_64-linux-gnu', '-Wl,-rpath,/lib/x86_64-linux-gnu', '-L/lib/x86_64-linux-gnu', '-lmpichf90', '-lgfortran', '-lm', '-Wl,-rpath,/home/hills/seska/packages/openmpi/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib', '-Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-Wl,-rpath,/usr/lib/x86_64-linux-gnu', '-Wl,-rpath,/lib/x86_64-linux-gnu', '-lgfortran', '-lm', '-lquadmath', '-lm'] Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.libraries/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -o /tmp/petsc-U9YCMv/config.libraries/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dpttrf_(); int main() { dpttrf_() ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lflapack -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lfblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lflapack -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lfblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lflapack -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lfblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Defined "HAVE_LIBFLAPACK" to "1" Popping language C Checking for function dpttrs_ in library ['/home/hills/seska/packages/fblaslapack/libflapack.a'] ['/home/hills/seska/packages/fblaslapack/libfblas.a', '-Wl,-rpath,/home/hills/seska/packages/openmpi/lib', '-L/home/hills/seska/packages/openmpi/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib', '-L/home/hills/seska/packages/tau/x86_64/lib', '-Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7', '-L/usr/lib/gcc/x86_64-linux-gnu/4.7', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-Wl,-rpath,/usr/lib/x86_64-linux-gnu', '-L/usr/lib/x86_64-linux-gnu', '-Wl,-rpath,/lib/x86_64-linux-gnu', '-L/lib/x86_64-linux-gnu', '-lmpichf90', '-lgfortran', '-lm', '-Wl,-rpath,/home/hills/seska/packages/openmpi/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib', '-Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-Wl,-rpath,/usr/lib/x86_64-linux-gnu', '-Wl,-rpath,/lib/x86_64-linux-gnu', '-lgfortran', '-lm', '-lquadmath', '-lm'] Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.libraries/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -o /tmp/petsc-U9YCMv/config.libraries/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dpttrs_(); int main() { dpttrs_() ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lflapack -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lfblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lflapack -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lfblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lflapack -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lfblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Defined "HAVE_LIBFLAPACK" to "1" Popping language C Checking for function dstein_ in library ['/home/hills/seska/packages/fblaslapack/libflapack.a'] ['/home/hills/seska/packages/fblaslapack/libfblas.a', '-Wl,-rpath,/home/hills/seska/packages/openmpi/lib', '-L/home/hills/seska/packages/openmpi/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib', '-L/home/hills/seska/packages/tau/x86_64/lib', '-Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7', '-L/usr/lib/gcc/x86_64-linux-gnu/4.7', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-Wl,-rpath,/usr/lib/x86_64-linux-gnu', '-L/usr/lib/x86_64-linux-gnu', '-Wl,-rpath,/lib/x86_64-linux-gnu', '-L/lib/x86_64-linux-gnu', '-lmpichf90', '-lgfortran', '-lm', '-Wl,-rpath,/home/hills/seska/packages/openmpi/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib', '-Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-Wl,-rpath,/usr/lib/x86_64-linux-gnu', '-Wl,-rpath,/lib/x86_64-linux-gnu', '-lgfortran', '-lm', '-lquadmath', '-lm'] Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.libraries/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -o /tmp/petsc-U9YCMv/config.libraries/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dstein_(); int main() { dstein_() ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lflapack -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lfblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lflapack -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lfblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lflapack -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lfblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Defined "HAVE_LIBFLAPACK" to "1" Popping language C Checking for function dorgqr_ in library ['/home/hills/seska/packages/fblaslapack/libflapack.a'] ['/home/hills/seska/packages/fblaslapack/libfblas.a', '-Wl,-rpath,/home/hills/seska/packages/openmpi/lib', '-L/home/hills/seska/packages/openmpi/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib', '-L/home/hills/seska/packages/tau/x86_64/lib', '-Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7', '-L/usr/lib/gcc/x86_64-linux-gnu/4.7', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-Wl,-rpath,/usr/lib/x86_64-linux-gnu', '-L/usr/lib/x86_64-linux-gnu', '-Wl,-rpath,/lib/x86_64-linux-gnu', '-L/lib/x86_64-linux-gnu', '-lmpichf90', '-lgfortran', '-lm', '-Wl,-rpath,/home/hills/seska/packages/openmpi/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib', '-Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-Wl,-rpath,/usr/lib/x86_64-linux-gnu', '-Wl,-rpath,/lib/x86_64-linux-gnu', '-lgfortran', '-lm', '-lquadmath', '-lm'] Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.libraries/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -o /tmp/petsc-U9YCMv/config.libraries/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dorgqr_(); int main() { dorgqr_() ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lflapack -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lfblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lflapack -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lfblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lflapack -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lfblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Defined "HAVE_LIBFLAPACK" to "1" Popping language C Checking for function dgeqrf_ in library ['/home/hills/seska/packages/fblaslapack/libflapack.a'] ['/home/hills/seska/packages/fblaslapack/libfblas.a', '-Wl,-rpath,/home/hills/seska/packages/openmpi/lib', '-L/home/hills/seska/packages/openmpi/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib', '-L/home/hills/seska/packages/tau/x86_64/lib', '-Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7', '-L/usr/lib/gcc/x86_64-linux-gnu/4.7', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-Wl,-rpath,/usr/lib/x86_64-linux-gnu', '-L/usr/lib/x86_64-linux-gnu', '-Wl,-rpath,/lib/x86_64-linux-gnu', '-L/lib/x86_64-linux-gnu', '-lmpichf90', '-lgfortran', '-lm', '-Wl,-rpath,/home/hills/seska/packages/openmpi/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib', '-Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-Wl,-rpath,/usr/lib/x86_64-linux-gnu', '-Wl,-rpath,/lib/x86_64-linux-gnu', '-lgfortran', '-lm', '-lquadmath', '-lm'] Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.libraries/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -o /tmp/petsc-U9YCMv/config.libraries/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dgeqrf_(); int main() { dgeqrf_() ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lflapack -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lfblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lflapack -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lfblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lflapack -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lfblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Defined "HAVE_LIBFLAPACK" to "1" Popping language C Checking for function dgesv_ in library ['/home/hills/seska/packages/fblaslapack/libflapack.a'] ['/home/hills/seska/packages/fblaslapack/libfblas.a', '-Wl,-rpath,/home/hills/seska/packages/openmpi/lib', '-L/home/hills/seska/packages/openmpi/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib', '-L/home/hills/seska/packages/tau/x86_64/lib', '-Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7', '-L/usr/lib/gcc/x86_64-linux-gnu/4.7', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-Wl,-rpath,/usr/lib/x86_64-linux-gnu', '-L/usr/lib/x86_64-linux-gnu', '-Wl,-rpath,/lib/x86_64-linux-gnu', '-L/lib/x86_64-linux-gnu', '-lmpichf90', '-lgfortran', '-lm', '-Wl,-rpath,/home/hills/seska/packages/openmpi/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib', '-Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-Wl,-rpath,/usr/lib/x86_64-linux-gnu', '-Wl,-rpath,/lib/x86_64-linux-gnu', '-lgfortran', '-lm', '-lquadmath', '-lm'] Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.libraries/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -o /tmp/petsc-U9YCMv/config.libraries/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dgesv_(); int main() { dgesv_() ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lflapack -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lfblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lflapack -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lfblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lflapack -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lfblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Defined "HAVE_LIBFLAPACK" to "1" Popping language C Checking for function dhseqr_ in library ['/home/hills/seska/packages/fblaslapack/libflapack.a'] ['/home/hills/seska/packages/fblaslapack/libfblas.a', '-Wl,-rpath,/home/hills/seska/packages/openmpi/lib', '-L/home/hills/seska/packages/openmpi/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib', '-L/home/hills/seska/packages/tau/x86_64/lib', '-Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7', '-L/usr/lib/gcc/x86_64-linux-gnu/4.7', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-Wl,-rpath,/usr/lib/x86_64-linux-gnu', '-L/usr/lib/x86_64-linux-gnu', '-Wl,-rpath,/lib/x86_64-linux-gnu', '-L/lib/x86_64-linux-gnu', '-lmpichf90', '-lgfortran', '-lm', '-Wl,-rpath,/home/hills/seska/packages/openmpi/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib', '-Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-Wl,-rpath,/usr/lib/x86_64-linux-gnu', '-Wl,-rpath,/lib/x86_64-linux-gnu', '-lgfortran', '-lm', '-lquadmath', '-lm'] Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.libraries/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -o /tmp/petsc-U9YCMv/config.libraries/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dhseqr_(); int main() { dhseqr_() ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lflapack -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lfblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lflapack -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lfblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lflapack -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lfblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Defined "HAVE_LIBFLAPACK" to "1" Popping language C Checking for function dgeqrf_ in library ['/home/hills/seska/packages/fblaslapack/libflapack.a'] ['/home/hills/seska/packages/fblaslapack/libfblas.a', '-Wl,-rpath,/home/hills/seska/packages/openmpi/lib', '-L/home/hills/seska/packages/openmpi/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib', '-L/home/hills/seska/packages/tau/x86_64/lib', '-Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7', '-L/usr/lib/gcc/x86_64-linux-gnu/4.7', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-Wl,-rpath,/usr/lib/x86_64-linux-gnu', '-L/usr/lib/x86_64-linux-gnu', '-Wl,-rpath,/lib/x86_64-linux-gnu', '-L/lib/x86_64-linux-gnu', '-lmpichf90', '-lgfortran', '-lm', '-Wl,-rpath,/home/hills/seska/packages/openmpi/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib', '-Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-Wl,-rpath,/usr/lib/x86_64-linux-gnu', '-Wl,-rpath,/lib/x86_64-linux-gnu', '-lgfortran', '-lm', '-lquadmath', '-lm'] Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.libraries/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -o /tmp/petsc-U9YCMv/config.libraries/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dgeqrf_(); int main() { dgeqrf_() ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lflapack -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lfblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lflapack -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lfblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lflapack -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lfblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Defined "HAVE_LIBFLAPACK" to "1" Popping language C Checking for function dsteqr_ in library ['/home/hills/seska/packages/fblaslapack/libflapack.a'] ['/home/hills/seska/packages/fblaslapack/libfblas.a', '-Wl,-rpath,/home/hills/seska/packages/openmpi/lib', '-L/home/hills/seska/packages/openmpi/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib', '-L/home/hills/seska/packages/tau/x86_64/lib', '-Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7', '-L/usr/lib/gcc/x86_64-linux-gnu/4.7', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-Wl,-rpath,/usr/lib/x86_64-linux-gnu', '-L/usr/lib/x86_64-linux-gnu', '-Wl,-rpath,/lib/x86_64-linux-gnu', '-L/lib/x86_64-linux-gnu', '-lmpichf90', '-lgfortran', '-lm', '-Wl,-rpath,/home/hills/seska/packages/openmpi/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib', '-Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-Wl,-rpath,/usr/lib/x86_64-linux-gnu', '-Wl,-rpath,/lib/x86_64-linux-gnu', '-lgfortran', '-lm', '-lquadmath', '-lm'] Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.libraries/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -o /tmp/petsc-U9YCMv/config.libraries/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dsteqr_(); int main() { dsteqr_() ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lflapack -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lfblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lflapack -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lfblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lflapack -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lfblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Defined "HAVE_LIBFLAPACK" to "1" Popping language C ================================================================================ TEST checklsame from config.packages.BlasLapack(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/packages/BlasLapack.py:532) TESTING: checklsame from config.packages.BlasLapack(config/BuildSystem/config/packages/BlasLapack.py:532) Do the BLAS/LAPACK libraries have a valid lsame() function with correction binding. Lion and xcode 4.2 do not Checking for function lsame_ in library ['/home/hills/seska/packages/fblaslapack/libflapack.a', '/home/hills/seska/packages/fblaslapack/libfblas.a', '-Wl,-rpath,/home/hills/seska/packages/openmpi/lib', '-L/home/hills/seska/packages/openmpi/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib', '-L/home/hills/seska/packages/tau/x86_64/lib', '-Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7', '-L/usr/lib/gcc/x86_64-linux-gnu/4.7', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-Wl,-rpath,/usr/lib/x86_64-linux-gnu', '-L/usr/lib/x86_64-linux-gnu', '-Wl,-rpath,/lib/x86_64-linux-gnu', '-L/lib/x86_64-linux-gnu', '-lmpichf90', '-lgfortran', '-lm', '-Wl,-rpath,/home/hills/seska/packages/openmpi/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib', '-Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-Wl,-rpath,/usr/lib/x86_64-linux-gnu', '-Wl,-rpath,/lib/x86_64-linux-gnu', '-lgfortran', '-lm', '-lquadmath', '-lm'] [] Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.libraries/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -o /tmp/petsc-U9YCMv/config.libraries/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char lsame_(); int main() { lsame_() ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lflapack -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lfblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lflapack -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lfblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lflapack -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lfblas -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Defined "HAVE_LIBFLAPACK" to "1" Defined "HAVE_LIBFBLAS" to "1" Defined "HAVE_LIBMPICHF90" to "1" Defined "HAVE_LIBGFORTRAN" to "1" Defined "HAVE_LIBM" to "1" Defined "HAVE_LIBGFORTRAN" to "1" Defined "HAVE_LIBM" to "1" Defined "HAVE_LIBQUADMATH" to "1" Defined "HAVE_LIBM" to "1" Popping language C ================================================================================ TEST alternateConfigureLibrary from config.packages.UMFPACK(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/package.py:522) TESTING: alternateConfigureLibrary from config.packages.UMFPACK(config/BuildSystem/config/package.py:522) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from config.packages.CHOLMOD(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/package.py:522) TESTING: alternateConfigureLibrary from config.packages.CHOLMOD(config/BuildSystem/config/package.py:522) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.SuperLU_DIST(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/package.py:522) TESTING: alternateConfigureLibrary from PETSc.packages.SuperLU_DIST(config/BuildSystem/config/package.py:522) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.ml(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/package.py:522) TESTING: alternateConfigureLibrary from PETSc.packages.ml(config/BuildSystem/config/package.py:522) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.spai(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/package.py:522) TESTING: alternateConfigureLibrary from PETSc.packages.spai(config/BuildSystem/config/package.py:522) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.PaStiX(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/package.py:522) TESTING: alternateConfigureLibrary from PETSc.packages.PaStiX(config/BuildSystem/config/package.py:522) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.pARMS(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/package.py:522) TESTING: alternateConfigureLibrary from PETSc.packages.pARMS(config/BuildSystem/config/package.py:522) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.oski(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/package.py:522) TESTING: alternateConfigureLibrary from PETSc.packages.oski(config/BuildSystem/config/package.py:522) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.hypre(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/package.py:522) TESTING: alternateConfigureLibrary from PETSc.packages.hypre(config/BuildSystem/config/package.py:522) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.elemental(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/package.py:522) TESTING: alternateConfigureLibrary from PETSc.packages.elemental(config/BuildSystem/config/package.py:522) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.clique(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/package.py:522) TESTING: alternateConfigureLibrary from PETSc.packages.clique(config/BuildSystem/config/package.py:522) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.SuperLU(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/package.py:522) TESTING: alternateConfigureLibrary from PETSc.packages.SuperLU(config/BuildSystem/config/package.py:522) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.sundials(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/package.py:522) TESTING: alternateConfigureLibrary from PETSc.packages.sundials(config/BuildSystem/config/package.py:522) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.scalapack(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/package.py:522) TESTING: alternateConfigureLibrary from PETSc.packages.scalapack(config/BuildSystem/config/package.py:522) Called if --with-packagename=0; does nothing by default ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.MUMPS(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/package.py:522) TESTING: alternateConfigureLibrary from PETSc.packages.MUMPS(config/BuildSystem/config/package.py:522) Called if --with-packagename=0; does nothing by default ================================================================================ TEST configureCPURelax from config.atomics(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/atomics.py:17) TESTING: configureCPURelax from config.atomics(config/BuildSystem/config/atomics.py:17) Definitions for cpu relax assembly instructions All intermediate test results are stored in /tmp/petsc-U9YCMv/config.atomics sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.atomics/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.atomics/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.atomics/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.atomics/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.atomics/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.atomics Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.atomics/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.atomics -o /tmp/petsc-U9YCMv/config.atomics/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { asm volatile("rep; nop" ::: "memory");; return 0; } Defined "CPU_RELAX()" to "asm volatile("rep; nop" ::: "memory")" ================================================================================ TEST configureMemoryBarriers from config.atomics(/home/hills/seska-hills/packages/petsc-3.4.2/config/BuildSystem/config/atomics.py:36) TESTING: configureMemoryBarriers from config.atomics(config/BuildSystem/config/atomics.py:36) Definitions for memory barrier instructions sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.atomics/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.atomics -fPIC -g /tmp/petsc-U9YCMv/config.atomics/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.atomics/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.atomics -fPIC -g /tmp/petsc-U9YCMv/config.atomics/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.atomics/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.atomics -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.atomics Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.atomics/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.atomics -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.atomics -o /tmp/petsc-U9YCMv/config.atomics/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { asm volatile("mfence":::"memory"); return 0; } Defined "MEMORY_BARRIER()" to "asm volatile("mfence":::"memory")" sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.atomics/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.atomics -fPIC -g /tmp/petsc-U9YCMv/config.atomics/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.atomics/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.atomics -fPIC -g /tmp/petsc-U9YCMv/config.atomics/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.atomics/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.atomics -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.atomics Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.atomics/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.atomics -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.atomics -o /tmp/petsc-U9YCMv/config.atomics/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { asm volatile("lfence":::"memory"); return 0; } Defined "READ_MEMORY_BARRIER()" to "asm volatile("lfence":::"memory")" sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.atomics/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.atomics -fPIC -g /tmp/petsc-U9YCMv/config.atomics/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.atomics/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.atomics -fPIC -g /tmp/petsc-U9YCMv/config.atomics/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.atomics/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.atomics -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.atomics Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.atomics/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.atomics -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.atomics -o /tmp/petsc-U9YCMv/config.atomics/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { asm volatile("sfence":::"memory"); return 0; } Defined "WRITE_MEMORY_BARRIER()" to "asm volatile("sfence":::"memory")" ================================================================================ TEST configureInline from PETSc.Configure(/home/hills/seska-hills/packages/petsc-3.4.2/config/PETSc/Configure.py:722) TESTING: configureInline from PETSc.Configure(config/PETSc/Configure.py:722) Get a generic inline keyword, depending on the language Defined "STATIC_INLINE" to "static inline" Defined "RESTRICT" to " __restrict__" All intermediate test results are stored in /tmp/petsc-U9YCMv/PETSc.Configure sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/PETSc.Configure/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -fPIC -g /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/PETSc.Configure/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -fPIC -g /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.Configure PDT: Error: Couldn't create conftest.pdb: Trying the alternate PDT Rose parser based on EDG 4.4: /home/hills/seska/packages/pdt/x86_64//bin/edg44-c-roseparse /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.Configure PDT: Error parsing input file /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c Trying Older PDT Rose parser based on EDG 3.3: /home/hills/seska/packages/pdt/x86_64//bin/roseparse /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.Configure PDT: Error parsing input file /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c Error: Command(Executable) is -- Error: Full Command attempted is -- /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.Configure Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/PETSc.Configure -o /tmp/petsc-U9YCMv/PETSc.Configure/conftest.o Error: Compilation Failed Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -c -fPIC -g /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/PETSc.Configure -o /tmp/petsc-U9YCMv/PETSc.Configure/conftest.o Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Possible ERROR while running compiler: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.Configure PDT: Error: Couldn't create conftest.pdb: Trying the alternate PDT Rose parser based on EDG 4.4: /home/hills/seska/packages/pdt/x86_64//bin/edg44-c-roseparse /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.Configure PDT: Error parsing input file /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c Trying Older PDT Rose parser based on EDG 3.3: /home/hills/seska/packages/pdt/x86_64//bin/roseparse /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.Configure PDT: Error parsing input file /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c Error: Command(Executable) is -- Error: Full Command attempted is -- /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.Configure Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/PETSc.Configure -o /tmp/petsc-U9YCMv/PETSc.Configure/conftest.o Error: Compilation Failed Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -c -fPIC -g /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/PETSc.Configure -o /tmp/petsc-U9YCMv/PETSc.Configure/conftest.o Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue ret = 256 error message = {"/tmp/petsc-U9YCMv/PETSc.Configure/conftest.c", line 4: error: identifier "RTLD_DEFAULT" is undefined void *ptr = RTLD_DEFAULT; ^ 1 error detected in the compilation of "/tmp/petsc-U9YCMv/PETSc.Configure/conftest.c". "/tmp/petsc-U9YCMv/PETSc.Configure/conftest.c", line 4: error: identifier "RTLD_DEFAULT" is undefined void *ptr = RTLD_DEFAULT; ^ terminate called after throwing an instance of 'rose_exception' what(): Errors in Processing: (frontend_failed) Aborted (core dumped) "/tmp/petsc-U9YCMv/PETSc.Configure/conftest.c", line 4: error: identifier "RTLD_DEFAULT" is undefined void *ptr = RTLD_DEFAULT; ^ terminate called after throwing an instance of 'rose_exception' what(): Errors in Processing: (frontend_failed) Aborted (core dumped) /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c:4:15: error: ‘RTLD_DEFAULT’ undeclared here (not in a function) make: *** [all] Error 1 } Source: #include "confdefs.h" #include "conffix.h" #include void *ptr = RTLD_DEFAULT; int main() { ; return 0; } ================================================================================ TEST configurePrefetch from PETSc.Configure(/home/hills/seska-hills/packages/petsc-3.4.2/config/PETSc/Configure.py:580) TESTING: configurePrefetch from PETSc.Configure(config/PETSc/Configure.py:580) Sees if there are any prefetch functions supported sh: uname -s Executing: uname -s sh: Linux Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/PETSc.Configure/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -fPIC -g /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/PETSc.Configure/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -fPIC -g /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.Configure PDT: Error: Couldn't create conftest.pdb: Trying the alternate PDT Rose parser based on EDG 4.4: /home/hills/seska/packages/pdt/x86_64//bin/edg44-c-roseparse /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.Configure Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.Configure -o /tmp/petsc-U9YCMv/PETSc.Configure/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Possible ERROR while running compiler: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.Configure PDT: Error: Couldn't create conftest.pdb: Trying the alternate PDT Rose parser based on EDG 4.4: /home/hills/seska/packages/pdt/x86_64//bin/edg44-c-roseparse /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.Configure Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.Configure -o /tmp/petsc-U9YCMv/PETSc.Configure/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb error message = {"/tmp/petsc-U9YCMv/PETSc.Configure/conftest.c", line 6: error: identifier "_MM_HINT_NTA" is undefined void *v = 0;_mm_prefetch((const char*)v,_MM_HINT_NTA); ^ 1 error detected in the compilation of "/tmp/petsc-U9YCMv/PETSc.Configure/conftest.c". } Source: #include "confdefs.h" #include "conffix.h" #include int main() { void *v = 0;_mm_prefetch((const char*)v,_MM_HINT_NTA); ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/PETSc.Configure/conftest -fPIC -g /tmp/petsc-U9YCMv/PETSc.Configure/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/PETSc.Configure/conftest -fPIC -g /tmp/petsc-U9YCMv/PETSc.Configure/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/PETSc.Configure/conftest -fPIC -g /tmp/petsc-U9YCMv/PETSc.Configure/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Defined "HAVE_XMMINTRIN_H" to "1" Defined "Prefetch(a,b,c)" to "_mm_prefetch((const char*)(a),(c))" Defined "PREFETCH_HINT_NTA" to "_MM_HINT_NTA" Defined "PREFETCH_HINT_T0" to "_MM_HINT_T0" Defined "PREFETCH_HINT_T1" to "_MM_HINT_T1" Defined "PREFETCH_HINT_T2" to "_MM_HINT_T2" Popping language C ================================================================================ TEST configureUnused from PETSc.Configure(/home/hills/seska-hills/packages/petsc-3.4.2/config/PETSc/Configure.py:650) TESTING: configureUnused from PETSc.Configure(config/PETSc/Configure.py:650) Sees if __attribute((unused)) is supported Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/PETSc.Configure/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -fPIC -g /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/PETSc.Configure/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -fPIC -g /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.Configure Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.Configure -o /tmp/petsc-U9YCMv/PETSc.Configure/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" __attribute((unused)) static int myfunc(__attribute((unused)) void *name){ return 1;} int main() { int i = 0; int j = myfunc(&i); typedef void* atype; __attribute((unused)) atype a; ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/PETSc.Configure/conftest -fPIC -g /tmp/petsc-U9YCMv/PETSc.Configure/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/PETSc.Configure/conftest -fPIC -g /tmp/petsc-U9YCMv/PETSc.Configure/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/PETSc.Configure/conftest -fPIC -g /tmp/petsc-U9YCMv/PETSc.Configure/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Defined "UNUSED" to "__attribute((unused))" Popping language C ================================================================================ TEST configureDeprecated from PETSc.Configure(/home/hills/seska-hills/packages/petsc-3.4.2/config/PETSc/Configure.py:662) TESTING: configureDeprecated from PETSc.Configure(config/PETSc/Configure.py:662) Check if __attribute((deprecated)) is supported Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/PETSc.Configure/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -fPIC -g /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/PETSc.Configure/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -fPIC -g /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.Configure PDT: Error: Couldn't create conftest.pdb: Trying the alternate PDT Rose parser based on EDG 4.4: /home/hills/seska/packages/pdt/x86_64//bin/edg44-c-roseparse /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.Configure PDT: Error parsing input file /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c Trying Older PDT Rose parser based on EDG 3.3: /home/hills/seska/packages/pdt/x86_64//bin/roseparse /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.Configure PDT: Error parsing input file /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c Error: Command(Executable) is -- Error: Full Command attempted is -- /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.Configure Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/PETSc.Configure -o /tmp/petsc-U9YCMv/PETSc.Configure/conftest.o Looking for file: conftest.o Possible ERROR while running compiler: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.Configure PDT: Error: Couldn't create conftest.pdb: Trying the alternate PDT Rose parser based on EDG 4.4: /home/hills/seska/packages/pdt/x86_64//bin/edg44-c-roseparse /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.Configure PDT: Error parsing input file /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c Trying Older PDT Rose parser based on EDG 3.3: /home/hills/seska/packages/pdt/x86_64//bin/roseparse /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.Configure PDT: Error parsing input file /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c Error: Command(Executable) is -- Error: Full Command attempted is -- /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.Configure Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/PETSc.Configure -o /tmp/petsc-U9YCMv/PETSc.Configure/conftest.o Looking for file: conftest.o error message = {"/tmp/petsc-U9YCMv/PETSc.Configure/conftest.c", line 3: error: attribute "deprecated" does not take arguments __attribute((deprecated("Why you shouldn't use myfunc"))) static int myfunc(void) { return 1;} ^ "/tmp/petsc-U9YCMv/PETSc.Configure/conftest.c", line 3: warning: function "myfunc" was declared but never referenced __attribute((deprecated("Why you shouldn't use myfunc"))) static int myfunc(void) { return 1;} ^ 1 error detected in the compilation of "/tmp/petsc-U9YCMv/PETSc.Configure/conftest.c". "/tmp/petsc-U9YCMv/PETSc.Configure/conftest.c", line 3: error: invalid argument to attribute "deprecated" __attribute((deprecated("Why you shouldn't use myfunc"))) static int myfunc(void) { return 1;} ^ "/tmp/petsc-U9YCMv/PETSc.Configure/conftest.c", line 3: warning: function "myfunc" was declared but never referenced __attribute((deprecated("Why you shouldn't use myfunc"))) static int myfunc(void) { return 1;} ^ terminate called after throwing an instance of 'rose_exception' what(): Errors in Processing: (frontend_failed) Aborted (core dumped) "/tmp/petsc-U9YCMv/PETSc.Configure/conftest.c", line 3: error: attribute "deprecated" does not take arguments __attribute((deprecated("Why you shouldn't use myfunc"))) static int myfunc(void) { return 1;} ^ "/tmp/petsc-U9YCMv/PETSc.Configure/conftest.c", line 3: warning: function "myfunc" was declared but never referenced __attribute((deprecated("Why you shouldn't use myfunc"))) static int myfunc(void) { return 1;} ^ terminate called after throwing an instance of 'rose_exception' what(): Errors in Processing: (frontend_failed) Aborted (core dumped) } Source: #include "confdefs.h" #include "conffix.h" __attribute((deprecated("Why you shouldn't use myfunc"))) static int myfunc(void) { return 1;} int main() { ; return 0; } Defined "DEPRECATED(why)" to "__attribute((deprecated(why)))" Popping language C ================================================================================ TEST configureExpect from PETSc.Configure(/home/hills/seska-hills/packages/petsc-3.4.2/config/PETSc/Configure.py:671) TESTING: configureExpect from PETSc.Configure(config/PETSc/Configure.py:671) Sees if the __builtin_expect directive is supported Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/PETSc.Configure/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -fPIC -g /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/PETSc.Configure/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -fPIC -g /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.Configure Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.Configure -o /tmp/petsc-U9YCMv/PETSc.Configure/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { if (__builtin_expect(0,1)) return 1;; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/PETSc.Configure/conftest -fPIC -g /tmp/petsc-U9YCMv/PETSc.Configure/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/PETSc.Configure/conftest -fPIC -g /tmp/petsc-U9YCMv/PETSc.Configure/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/PETSc.Configure/conftest -fPIC -g /tmp/petsc-U9YCMv/PETSc.Configure/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Defined "HAVE_BUILTIN_EXPECT" to "1" Popping language C ================================================================================ TEST configureFunctionName from PETSc.Configure(/home/hills/seska-hills/packages/petsc-3.4.2/config/PETSc/Configure.py:678) TESTING: configureFunctionName from PETSc.Configure(config/PETSc/Configure.py:678) Sees if the compiler supports __func__ or a variant. Falls back on __FUNCT__ which PETSc source defines, but most users do not, thus stack traces through user code are better when the compiler's variant is used. Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/PETSc.Configure/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -fPIC -g /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/PETSc.Configure/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -fPIC -g /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.Configure Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.Configure -o /tmp/petsc-U9YCMv/PETSc.Configure/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { if (__func__[0] != 'm') return 1;; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/PETSc.Configure/conftest -fPIC -g /tmp/petsc-U9YCMv/PETSc.Configure/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/PETSc.Configure/conftest -fPIC -g /tmp/petsc-U9YCMv/PETSc.Configure/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/PETSc.Configure/conftest -fPIC -g /tmp/petsc-U9YCMv/PETSc.Configure/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Popping language C Defined "FUNCTION_NAME_C" to "__func__" Pushing language Cxx sh: mpicxx -c -o /tmp/petsc-U9YCMv/PETSc.Configure/conftest.o -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g -fPIC /tmp/petsc-U9YCMv/PETSc.Configure/conftest.cc Executing: mpicxx -c -o /tmp/petsc-U9YCMv/PETSc.Configure/conftest.o -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g -fPIC /tmp/petsc-U9YCMv/PETSc.Configure/conftest.cc sh: Successful compile: Source: #include "confdefs.h" #include "conffix.h" int main() { if (__func__[0] != 'm') return 1;; return 0; } Pushing language CXX Popping language CXX sh: mpicxx -o /tmp/petsc-U9YCMv/PETSc.Configure/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g /tmp/petsc-U9YCMv/PETSc.Configure/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: mpicxx -o /tmp/petsc-U9YCMv/PETSc.Configure/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g /tmp/petsc-U9YCMv/PETSc.Configure/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Popping language Cxx Defined "FUNCTION_NAME_CXX" to "__func__" ================================================================================ TEST configureIntptrt from PETSc.Configure(/home/hills/seska-hills/packages/petsc-3.4.2/config/PETSc/Configure.py:700) TESTING: configureIntptrt from PETSc.Configure(config/PETSc/Configure.py:700) Determine what to use for uintptr_t Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/PETSc.Configure/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -fPIC -g /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/PETSc.Configure/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -fPIC -g /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.Configure Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.libraries -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.Configure -o /tmp/petsc-U9YCMv/PETSc.Configure/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int x; uintptr_t i = (uintptr_t)&x;; return 0; } Defined "UINTPTR_T" to "uintptr_t" Popping language C ================================================================================ TEST configureSolaris from PETSc.Configure(/home/hills/seska-hills/packages/petsc-3.4.2/config/PETSc/Configure.py:735) TESTING: configureSolaris from PETSc.Configure(config/PETSc/Configure.py:735) Solaris specific stuff ================================================================================ TEST configureLinux from PETSc.Configure(/home/hills/seska-hills/packages/petsc-3.4.2/config/PETSc/Configure.py:748) TESTING: configureLinux from PETSc.Configure(config/PETSc/Configure.py:748) Linux specific stuff Defined "HAVE_DOUBLE_ALIGN_MALLOC" to "1" ================================================================================ TEST configureWin32 from PETSc.Configure(/home/hills/seska-hills/packages/petsc-3.4.2/config/PETSc/Configure.py:754) TESTING: configureWin32 from PETSc.Configure(config/PETSc/Configure.py:754) Win32 non-cygwin specific stuff Checking for function GetComputerName in library ['Kernel32.lib'] [] Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries PDT: Error: Couldn't create conftest.pdb: Trying the alternate PDT Rose parser based on EDG 4.4: /home/hills/seska/packages/pdt/x86_64//bin/edg44-c-roseparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries PDT: Error parsing input file /tmp/petsc-U9YCMv/config.libraries/conftest.c Trying Older PDT Rose parser based on EDG 3.3: /home/hills/seska/packages/pdt/x86_64//bin/roseparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries PDT: Error parsing input file /tmp/petsc-U9YCMv/config.libraries/conftest.c Error: Command(Executable) is -- Error: Full Command attempted is -- /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/config.libraries -o /tmp/petsc-U9YCMv/config.libraries/conftest.o Error: Compilation Failed Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -c -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/config.libraries -o /tmp/petsc-U9YCMv/config.libraries/conftest.o Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Possible ERROR while running compiler: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries PDT: Error: Couldn't create conftest.pdb: Trying the alternate PDT Rose parser based on EDG 4.4: /home/hills/seska/packages/pdt/x86_64//bin/edg44-c-roseparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries PDT: Error parsing input file /tmp/petsc-U9YCMv/config.libraries/conftest.c Trying Older PDT Rose parser based on EDG 3.3: /home/hills/seska/packages/pdt/x86_64//bin/roseparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries PDT: Error parsing input file /tmp/petsc-U9YCMv/config.libraries/conftest.c Error: Command(Executable) is -- Error: Full Command attempted is -- /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/config.libraries -o /tmp/petsc-U9YCMv/config.libraries/conftest.o Error: Compilation Failed Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -c -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/config.libraries -o /tmp/petsc-U9YCMv/config.libraries/conftest.o Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue ret = 256 error message = {"/tmp/petsc-U9YCMv/config.libraries/conftest.c", line 4: catastrophic error: could not open source file "Windows.h" #include ^ 1 catastrophic error detected in the compilation of "/tmp/petsc-U9YCMv/config.libraries/conftest.c". Compilation terminated. "/tmp/petsc-U9YCMv/config.libraries/conftest.c", line 4: catastrophic error: cannot open source file "Windows.h" #include ^ terminate called after throwing an instance of 'rose_exception' what(): Errors in Processing: (frontend_failed) Aborted (core dumped) "/tmp/petsc-U9YCMv/config.libraries/conftest.c", line 4: catastrophic error: could not open source file "Windows.h" #include ^ "/tmp/petsc-U9YCMv/config.libraries/conftest.c", line 4: internal error: assertion failed at: "../../../../../../../src/frontend/CxxFrontend/EDG/EDG_3.3/src/lexica l.c", line 3411 #include ^ Compilation aborted. Segmentation fault (core dumped) /tmp/petsc-U9YCMv/config.libraries/conftest.c:4:21: fatal error: Windows.h: No such file or directory compilation terminated. make: *** [all] Error 1 } Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include int main() { GetComputerName(NULL,NULL);; return 0; } Compile failed inside link Popping language C Checking for function GetComputerName in library ['kernel32'] [] Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries PDT: Error: Couldn't create conftest.pdb: Trying the alternate PDT Rose parser based on EDG 4.4: /home/hills/seska/packages/pdt/x86_64//bin/edg44-c-roseparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries PDT: Error parsing input file /tmp/petsc-U9YCMv/config.libraries/conftest.c Trying Older PDT Rose parser based on EDG 3.3: /home/hills/seska/packages/pdt/x86_64//bin/roseparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries PDT: Error parsing input file /tmp/petsc-U9YCMv/config.libraries/conftest.c Error: Command(Executable) is -- Error: Full Command attempted is -- /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/config.libraries -o /tmp/petsc-U9YCMv/config.libraries/conftest.o Error: Compilation Failed Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -c -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/config.libraries -o /tmp/petsc-U9YCMv/config.libraries/conftest.o Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Possible ERROR while running compiler: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries PDT: Error: Couldn't create conftest.pdb: Trying the alternate PDT Rose parser based on EDG 4.4: /home/hills/seska/packages/pdt/x86_64//bin/edg44-c-roseparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries PDT: Error parsing input file /tmp/petsc-U9YCMv/config.libraries/conftest.c Trying Older PDT Rose parser based on EDG 3.3: /home/hills/seska/packages/pdt/x86_64//bin/roseparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries PDT: Error parsing input file /tmp/petsc-U9YCMv/config.libraries/conftest.c Error: Command(Executable) is -- Error: Full Command attempted is -- /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/config.libraries -o /tmp/petsc-U9YCMv/config.libraries/conftest.o Error: Compilation Failed Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -c -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/config.libraries -o /tmp/petsc-U9YCMv/config.libraries/conftest.o Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue ret = 256 error message = {"/tmp/petsc-U9YCMv/config.libraries/conftest.c", line 4: catastrophic error: could not open source file "Windows.h" #include ^ 1 catastrophic error detected in the compilation of "/tmp/petsc-U9YCMv/config.libraries/conftest.c". Compilation terminated. "/tmp/petsc-U9YCMv/config.libraries/conftest.c", line 4: catastrophic error: cannot open source file "Windows.h" #include ^ terminate called after throwing an instance of 'rose_exception' what(): Errors in Processing: (frontend_failed) Aborted (core dumped) "/tmp/petsc-U9YCMv/config.libraries/conftest.c", line 4: catastrophic error: could not open source file "Windows.h" #include ^ "/tmp/petsc-U9YCMv/config.libraries/conftest.c", line 4: internal error: assertion failed at: "../../../../../../../src/frontend/CxxFrontend/EDG/EDG_3.3/src/lexica l.c", line 3411 #include ^ Compilation aborted. Segmentation fault (core dumped) /tmp/petsc-U9YCMv/config.libraries/conftest.c:4:21: fatal error: Windows.h: No such file or directory compilation terminated. make: *** [all] Error 1 } Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include int main() { GetComputerName(NULL,NULL);; return 0; } Compile failed inside link Popping language C Checking for function GetUserName in library ['Advapi32.lib'] [] Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries PDT: Error: Couldn't create conftest.pdb: Trying the alternate PDT Rose parser based on EDG 4.4: /home/hills/seska/packages/pdt/x86_64//bin/edg44-c-roseparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries PDT: Error parsing input file /tmp/petsc-U9YCMv/config.libraries/conftest.c Trying Older PDT Rose parser based on EDG 3.3: /home/hills/seska/packages/pdt/x86_64//bin/roseparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries PDT: Error parsing input file /tmp/petsc-U9YCMv/config.libraries/conftest.c Error: Command(Executable) is -- Error: Full Command attempted is -- /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/config.libraries -o /tmp/petsc-U9YCMv/config.libraries/conftest.o Error: Compilation Failed Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -c -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/config.libraries -o /tmp/petsc-U9YCMv/config.libraries/conftest.o Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Possible ERROR while running compiler: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries PDT: Error: Couldn't create conftest.pdb: Trying the alternate PDT Rose parser based on EDG 4.4: /home/hills/seska/packages/pdt/x86_64//bin/edg44-c-roseparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries PDT: Error parsing input file /tmp/petsc-U9YCMv/config.libraries/conftest.c Trying Older PDT Rose parser based on EDG 3.3: /home/hills/seska/packages/pdt/x86_64//bin/roseparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries PDT: Error parsing input file /tmp/petsc-U9YCMv/config.libraries/conftest.c Error: Command(Executable) is -- Error: Full Command attempted is -- /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/config.libraries -o /tmp/petsc-U9YCMv/config.libraries/conftest.o Error: Compilation Failed Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -c -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/config.libraries -o /tmp/petsc-U9YCMv/config.libraries/conftest.o Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue ret = 256 error message = {"/tmp/petsc-U9YCMv/config.libraries/conftest.c", line 4: catastrophic error: could not open source file "Windows.h" #include ^ 1 catastrophic error detected in the compilation of "/tmp/petsc-U9YCMv/config.libraries/conftest.c". Compilation terminated. "/tmp/petsc-U9YCMv/config.libraries/conftest.c", line 4: catastrophic error: cannot open source file "Windows.h" #include ^ terminate called after throwing an instance of 'rose_exception' what(): Errors in Processing: (frontend_failed) Aborted (core dumped) "/tmp/petsc-U9YCMv/config.libraries/conftest.c", line 4: catastrophic error: could not open source file "Windows.h" #include ^ "/tmp/petsc-U9YCMv/config.libraries/conftest.c", line 4: internal error: assertion failed at: "../../../../../../../src/frontend/CxxFrontend/EDG/EDG_3.3/src/lexica l.c", line 3411 #include ^ Compilation aborted. Segmentation fault (core dumped) /tmp/petsc-U9YCMv/config.libraries/conftest.c:4:21: fatal error: Windows.h: No such file or directory compilation terminated. make: *** [all] Error 1 } Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include int main() { GetUserName(NULL,NULL);; return 0; } Compile failed inside link Popping language C Checking for function GetUserName in library ['advapi32'] [] Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries PDT: Error: Couldn't create conftest.pdb: Trying the alternate PDT Rose parser based on EDG 4.4: /home/hills/seska/packages/pdt/x86_64//bin/edg44-c-roseparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries PDT: Error parsing input file /tmp/petsc-U9YCMv/config.libraries/conftest.c Trying Older PDT Rose parser based on EDG 3.3: /home/hills/seska/packages/pdt/x86_64//bin/roseparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries PDT: Error parsing input file /tmp/petsc-U9YCMv/config.libraries/conftest.c Error: Command(Executable) is -- Error: Full Command attempted is -- /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/config.libraries -o /tmp/petsc-U9YCMv/config.libraries/conftest.o Error: Compilation Failed Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -c -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/config.libraries -o /tmp/petsc-U9YCMv/config.libraries/conftest.o Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Possible ERROR while running compiler: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries PDT: Error: Couldn't create conftest.pdb: Trying the alternate PDT Rose parser based on EDG 4.4: /home/hills/seska/packages/pdt/x86_64//bin/edg44-c-roseparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries PDT: Error parsing input file /tmp/petsc-U9YCMv/config.libraries/conftest.c Trying Older PDT Rose parser based on EDG 3.3: /home/hills/seska/packages/pdt/x86_64//bin/roseparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries PDT: Error parsing input file /tmp/petsc-U9YCMv/config.libraries/conftest.c Error: Command(Executable) is -- Error: Full Command attempted is -- /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/config.libraries -o /tmp/petsc-U9YCMv/config.libraries/conftest.o Error: Compilation Failed Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -c -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/config.libraries -o /tmp/petsc-U9YCMv/config.libraries/conftest.o Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue ret = 256 error message = {"/tmp/petsc-U9YCMv/config.libraries/conftest.c", line 4: catastrophic error: could not open source file "Windows.h" #include ^ 1 catastrophic error detected in the compilation of "/tmp/petsc-U9YCMv/config.libraries/conftest.c". Compilation terminated. "/tmp/petsc-U9YCMv/config.libraries/conftest.c", line 4: catastrophic error: cannot open source file "Windows.h" #include ^ terminate called after throwing an instance of 'rose_exception' what(): Errors in Processing: (frontend_failed) Aborted (core dumped) "/tmp/petsc-U9YCMv/config.libraries/conftest.c", line 4: catastrophic error: could not open source file "Windows.h" #include ^ "/tmp/petsc-U9YCMv/config.libraries/conftest.c", line 4: internal error: assertion failed at: "../../../../../../../src/frontend/CxxFrontend/EDG/EDG_3.3/src/lexica l.c", line 3411 #include ^ Compilation aborted. Segmentation fault (core dumped) /tmp/petsc-U9YCMv/config.libraries/conftest.c:4:21: fatal error: Windows.h: No such file or directory compilation terminated. make: *** [all] Error 1 } Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include int main() { GetUserName(NULL,NULL);; return 0; } Compile failed inside link Popping language C Checking for function GetDC in library ['User32.lib'] [] Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries PDT: Error: Couldn't create conftest.pdb: Trying the alternate PDT Rose parser based on EDG 4.4: /home/hills/seska/packages/pdt/x86_64//bin/edg44-c-roseparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries PDT: Error parsing input file /tmp/petsc-U9YCMv/config.libraries/conftest.c Trying Older PDT Rose parser based on EDG 3.3: /home/hills/seska/packages/pdt/x86_64//bin/roseparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries PDT: Error parsing input file /tmp/petsc-U9YCMv/config.libraries/conftest.c Error: Command(Executable) is -- Error: Full Command attempted is -- /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/config.libraries -o /tmp/petsc-U9YCMv/config.libraries/conftest.o Error: Compilation Failed Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -c -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/config.libraries -o /tmp/petsc-U9YCMv/config.libraries/conftest.o Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Possible ERROR while running compiler: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries PDT: Error: Couldn't create conftest.pdb: Trying the alternate PDT Rose parser based on EDG 4.4: /home/hills/seska/packages/pdt/x86_64//bin/edg44-c-roseparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries PDT: Error parsing input file /tmp/petsc-U9YCMv/config.libraries/conftest.c Trying Older PDT Rose parser based on EDG 3.3: /home/hills/seska/packages/pdt/x86_64//bin/roseparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries PDT: Error parsing input file /tmp/petsc-U9YCMv/config.libraries/conftest.c Error: Command(Executable) is -- Error: Full Command attempted is -- /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/config.libraries -o /tmp/petsc-U9YCMv/config.libraries/conftest.o Error: Compilation Failed Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -c -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/config.libraries -o /tmp/petsc-U9YCMv/config.libraries/conftest.o Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue ret = 256 error message = {"/tmp/petsc-U9YCMv/config.libraries/conftest.c", line 4: catastrophic error: could not open source file "Windows.h" #include ^ 1 catastrophic error detected in the compilation of "/tmp/petsc-U9YCMv/config.libraries/conftest.c". Compilation terminated. "/tmp/petsc-U9YCMv/config.libraries/conftest.c", line 4: catastrophic error: cannot open source file "Windows.h" #include ^ terminate called after throwing an instance of 'rose_exception' what(): Errors in Processing: (frontend_failed) Aborted (core dumped) "/tmp/petsc-U9YCMv/config.libraries/conftest.c", line 4: catastrophic error: could not open source file "Windows.h" #include ^ "/tmp/petsc-U9YCMv/config.libraries/conftest.c", line 4: internal error: assertion failed at: "../../../../../../../src/frontend/CxxFrontend/EDG/EDG_3.3/src/lexica l.c", line 3411 #include ^ Compilation aborted. Segmentation fault (core dumped) /tmp/petsc-U9YCMv/config.libraries/conftest.c:4:21: fatal error: Windows.h: No such file or directory compilation terminated. make: *** [all] Error 1 } Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include int main() { GetDC(0);; return 0; } Compile failed inside link Popping language C Checking for function GetDC in library ['user32'] [] Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries PDT: Error: Couldn't create conftest.pdb: Trying the alternate PDT Rose parser based on EDG 4.4: /home/hills/seska/packages/pdt/x86_64//bin/edg44-c-roseparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries PDT: Error parsing input file /tmp/petsc-U9YCMv/config.libraries/conftest.c Trying Older PDT Rose parser based on EDG 3.3: /home/hills/seska/packages/pdt/x86_64//bin/roseparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries PDT: Error parsing input file /tmp/petsc-U9YCMv/config.libraries/conftest.c Error: Command(Executable) is -- Error: Full Command attempted is -- /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/config.libraries -o /tmp/petsc-U9YCMv/config.libraries/conftest.o Error: Compilation Failed Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -c -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/config.libraries -o /tmp/petsc-U9YCMv/config.libraries/conftest.o Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Possible ERROR while running compiler: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries PDT: Error: Couldn't create conftest.pdb: Trying the alternate PDT Rose parser based on EDG 4.4: /home/hills/seska/packages/pdt/x86_64//bin/edg44-c-roseparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries PDT: Error parsing input file /tmp/petsc-U9YCMv/config.libraries/conftest.c Trying Older PDT Rose parser based on EDG 3.3: /home/hills/seska/packages/pdt/x86_64//bin/roseparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries PDT: Error parsing input file /tmp/petsc-U9YCMv/config.libraries/conftest.c Error: Command(Executable) is -- Error: Full Command attempted is -- /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/config.libraries -o /tmp/petsc-U9YCMv/config.libraries/conftest.o Error: Compilation Failed Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -c -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/config.libraries -o /tmp/petsc-U9YCMv/config.libraries/conftest.o Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue ret = 256 error message = {"/tmp/petsc-U9YCMv/config.libraries/conftest.c", line 4: catastrophic error: could not open source file "Windows.h" #include ^ 1 catastrophic error detected in the compilation of "/tmp/petsc-U9YCMv/config.libraries/conftest.c". Compilation terminated. "/tmp/petsc-U9YCMv/config.libraries/conftest.c", line 4: catastrophic error: cannot open source file "Windows.h" #include ^ terminate called after throwing an instance of 'rose_exception' what(): Errors in Processing: (frontend_failed) Aborted (core dumped) "/tmp/petsc-U9YCMv/config.libraries/conftest.c", line 4: catastrophic error: could not open source file "Windows.h" #include ^ "/tmp/petsc-U9YCMv/config.libraries/conftest.c", line 4: internal error: assertion failed at: "../../../../../../../src/frontend/CxxFrontend/EDG/EDG_3.3/src/lexica l.c", line 3411 #include ^ Compilation aborted. Segmentation fault (core dumped) /tmp/petsc-U9YCMv/config.libraries/conftest.c:4:21: fatal error: Windows.h: No such file or directory compilation terminated. make: *** [all] Error 1 } Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include int main() { GetDC(0);; return 0; } Compile failed inside link Popping language C Checking for function CreateCompatibleDC in library ['Gdi32.lib'] [] Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries PDT: Error: Couldn't create conftest.pdb: Trying the alternate PDT Rose parser based on EDG 4.4: /home/hills/seska/packages/pdt/x86_64//bin/edg44-c-roseparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries PDT: Error parsing input file /tmp/petsc-U9YCMv/config.libraries/conftest.c Trying Older PDT Rose parser based on EDG 3.3: /home/hills/seska/packages/pdt/x86_64//bin/roseparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries PDT: Error parsing input file /tmp/petsc-U9YCMv/config.libraries/conftest.c Error: Command(Executable) is -- Error: Full Command attempted is -- /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/config.libraries -o /tmp/petsc-U9YCMv/config.libraries/conftest.o Error: Compilation Failed Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -c -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/config.libraries -o /tmp/petsc-U9YCMv/config.libraries/conftest.o Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Possible ERROR while running compiler: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries PDT: Error: Couldn't create conftest.pdb: Trying the alternate PDT Rose parser based on EDG 4.4: /home/hills/seska/packages/pdt/x86_64//bin/edg44-c-roseparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries PDT: Error parsing input file /tmp/petsc-U9YCMv/config.libraries/conftest.c Trying Older PDT Rose parser based on EDG 3.3: /home/hills/seska/packages/pdt/x86_64//bin/roseparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries PDT: Error parsing input file /tmp/petsc-U9YCMv/config.libraries/conftest.c Error: Command(Executable) is -- Error: Full Command attempted is -- /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/config.libraries -o /tmp/petsc-U9YCMv/config.libraries/conftest.o Error: Compilation Failed Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -c -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/config.libraries -o /tmp/petsc-U9YCMv/config.libraries/conftest.o Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue ret = 256 error message = {"/tmp/petsc-U9YCMv/config.libraries/conftest.c", line 4: catastrophic error: could not open source file "Windows.h" #include ^ 1 catastrophic error detected in the compilation of "/tmp/petsc-U9YCMv/config.libraries/conftest.c". Compilation terminated. "/tmp/petsc-U9YCMv/config.libraries/conftest.c", line 4: catastrophic error: cannot open source file "Windows.h" #include ^ terminate called after throwing an instance of 'rose_exception' what(): Errors in Processing: (frontend_failed) Aborted (core dumped) "/tmp/petsc-U9YCMv/config.libraries/conftest.c", line 4: catastrophic error: could not open source file "Windows.h" #include ^ "/tmp/petsc-U9YCMv/config.libraries/conftest.c", line 4: internal error: assertion failed at: "../../../../../../../src/frontend/CxxFrontend/EDG/EDG_3.3/src/lexica l.c", line 3411 #include ^ Compilation aborted. Segmentation fault (core dumped) /tmp/petsc-U9YCMv/config.libraries/conftest.c:4:21: fatal error: Windows.h: No such file or directory compilation terminated. make: *** [all] Error 1 } Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include int main() { CreateCompatibleDC(0);; return 0; } Compile failed inside link Popping language C Checking for function CreateCompatibleDC in library ['gdi32'] [] Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries PDT: Error: Couldn't create conftest.pdb: Trying the alternate PDT Rose parser based on EDG 4.4: /home/hills/seska/packages/pdt/x86_64//bin/edg44-c-roseparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries PDT: Error parsing input file /tmp/petsc-U9YCMv/config.libraries/conftest.c Trying Older PDT Rose parser based on EDG 3.3: /home/hills/seska/packages/pdt/x86_64//bin/roseparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries PDT: Error parsing input file /tmp/petsc-U9YCMv/config.libraries/conftest.c Error: Command(Executable) is -- Error: Full Command attempted is -- /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/config.libraries -o /tmp/petsc-U9YCMv/config.libraries/conftest.o Error: Compilation Failed Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -c -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/config.libraries -o /tmp/petsc-U9YCMv/config.libraries/conftest.o Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Possible ERROR while running compiler: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries PDT: Error: Couldn't create conftest.pdb: Trying the alternate PDT Rose parser based on EDG 4.4: /home/hills/seska/packages/pdt/x86_64//bin/edg44-c-roseparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries PDT: Error parsing input file /tmp/petsc-U9YCMv/config.libraries/conftest.c Trying Older PDT Rose parser based on EDG 3.3: /home/hills/seska/packages/pdt/x86_64//bin/roseparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries PDT: Error parsing input file /tmp/petsc-U9YCMv/config.libraries/conftest.c Error: Command(Executable) is -- Error: Full Command attempted is -- /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/config.libraries -o /tmp/petsc-U9YCMv/config.libraries/conftest.o Error: Compilation Failed Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -c -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/config.libraries -o /tmp/petsc-U9YCMv/config.libraries/conftest.o Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue ret = 256 error message = {"/tmp/petsc-U9YCMv/config.libraries/conftest.c", line 4: catastrophic error: could not open source file "Windows.h" #include ^ 1 catastrophic error detected in the compilation of "/tmp/petsc-U9YCMv/config.libraries/conftest.c". Compilation terminated. "/tmp/petsc-U9YCMv/config.libraries/conftest.c", line 4: catastrophic error: cannot open source file "Windows.h" #include ^ terminate called after throwing an instance of 'rose_exception' what(): Errors in Processing: (frontend_failed) Aborted (core dumped) "/tmp/petsc-U9YCMv/config.libraries/conftest.c", line 4: catastrophic error: could not open source file "Windows.h" #include ^ "/tmp/petsc-U9YCMv/config.libraries/conftest.c", line 4: internal error: assertion failed at: "../../../../../../../src/frontend/CxxFrontend/EDG/EDG_3.3/src/lexica l.c", line 3411 #include ^ Compilation aborted. Segmentation fault (core dumped) /tmp/petsc-U9YCMv/config.libraries/conftest.c:4:21: fatal error: Windows.h: No such file or directory compilation terminated. make: *** [all] Error 1 } Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include int main() { CreateCompatibleDC(0);; return 0; } Compile failed inside link Popping language C Checking for type: int32_t sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.types/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.types/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.types/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.types/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.types/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.types Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.types/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.types -o /tmp/petsc-U9YCMv/config.types/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #endif int main() { int32_t a;; return 0; } int32_t found sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/PETSc.Configure/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/PETSc.Configure/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.Configure Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.Configure -o /tmp/petsc-U9YCMv/PETSc.Configure/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { uid_t u; ; return 0; } sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/PETSc.Configure/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/PETSc.Configure/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.Configure Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.Configure -o /tmp/petsc-U9YCMv/PETSc.Configure/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" #if defined(PETSC_HAVE_UNISTD_H) #include #endif int main() { int a=R_OK; ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/PETSc.Configure/conftest -fPIC -g /tmp/petsc-U9YCMv/PETSc.Configure/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/PETSc.Configure/conftest -fPIC -g /tmp/petsc-U9YCMv/PETSc.Configure/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/PETSc.Configure/conftest -fPIC -g /tmp/petsc-U9YCMv/PETSc.Configure/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/PETSc.Configure/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/PETSc.Configure/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.Configure Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.Configure -o /tmp/petsc-U9YCMv/PETSc.Configure/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { int a=0; if (S_ISDIR(a)){} ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/PETSc.Configure/conftest -fPIC -g /tmp/petsc-U9YCMv/PETSc.Configure/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/PETSc.Configure/conftest -fPIC -g /tmp/petsc-U9YCMv/PETSc.Configure/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/PETSc.Configure/conftest -fPIC -g /tmp/petsc-U9YCMv/PETSc.Configure/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/PETSc.Configure/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/PETSc.Configure/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.Configure PDT: Error: Couldn't create conftest.pdb: Trying the alternate PDT Rose parser based on EDG 4.4: /home/hills/seska/packages/pdt/x86_64//bin/edg44-c-roseparse /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.Configure PDT: Error parsing input file /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c Trying Older PDT Rose parser based on EDG 3.3: /home/hills/seska/packages/pdt/x86_64//bin/roseparse /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.Configure PDT: Error parsing input file /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c Error: Command(Executable) is -- Error: Full Command attempted is -- /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.Configure Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/PETSc.Configure -o /tmp/petsc-U9YCMv/PETSc.Configure/conftest.o Error: Compilation Failed Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -c -fPIC -g /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/PETSc.Configure -o /tmp/petsc-U9YCMv/PETSc.Configure/conftest.o Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Possible ERROR while running compiler: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.Configure PDT: Error: Couldn't create conftest.pdb: Trying the alternate PDT Rose parser based on EDG 4.4: /home/hills/seska/packages/pdt/x86_64//bin/edg44-c-roseparse /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.Configure PDT: Error parsing input file /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c Trying Older PDT Rose parser based on EDG 3.3: /home/hills/seska/packages/pdt/x86_64//bin/roseparse /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.Configure PDT: Error parsing input file /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c Error: Command(Executable) is -- Error: Full Command attempted is -- /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.Configure Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/PETSc.Configure -o /tmp/petsc-U9YCMv/PETSc.Configure/conftest.o Error: Compilation Failed Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -c -fPIC -g /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/PETSc.Configure -o /tmp/petsc-U9YCMv/PETSc.Configure/conftest.o Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue ret = 256 error message = {"/tmp/petsc-U9YCMv/PETSc.Configure/conftest.c", line 3: catastrophic error: could not open source file "Windows.h" #include ^ 1 catastrophic error detected in the compilation of "/tmp/petsc-U9YCMv/PETSc.Configure/conftest.c". Compilation terminated. "/tmp/petsc-U9YCMv/PETSc.Configure/conftest.c", line 3: catastrophic error: cannot open source file "Windows.h" #include ^ terminate called after throwing an instance of 'rose_exception' what(): Errors in Processing: (frontend_failed) Aborted (core dumped) "/tmp/petsc-U9YCMv/PETSc.Configure/conftest.c", line 3: catastrophic error: could not open source file "Windows.h" #include ^ "/tmp/petsc-U9YCMv/PETSc.Configure/conftest.c", line 3: internal error: assertion failed at: "../../../../../../../src/frontend/CxxFrontend/EDG/EDG_3.3/src/lexica l.c", line 3411 #include ^ Compilation aborted. Segmentation fault (core dumped) /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c:3:21: fatal error: Windows.h: No such file or directory compilation terminated. make: *** [all] Error 1 } Source: #include "confdefs.h" #include "conffix.h" #include int main() { LARGE_INTEGER a; DWORD b=a.u.HighPart; ; return 0; } sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/PETSc.Configure/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/PETSc.Configure/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.Configure PDT: Error: Couldn't create conftest.pdb: Trying the alternate PDT Rose parser based on EDG 4.4: /home/hills/seska/packages/pdt/x86_64//bin/edg44-c-roseparse /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.Configure PDT: Error parsing input file /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c Trying Older PDT Rose parser based on EDG 3.3: /home/hills/seska/packages/pdt/x86_64//bin/roseparse /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.Configure PDT: Error parsing input file /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c Error: Command(Executable) is -- Error: Full Command attempted is -- /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.Configure Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/PETSc.Configure -o /tmp/petsc-U9YCMv/PETSc.Configure/conftest.o Error: Compilation Failed Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -c -fPIC -g /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/PETSc.Configure -o /tmp/petsc-U9YCMv/PETSc.Configure/conftest.o Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Possible ERROR while running compiler: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.Configure PDT: Error: Couldn't create conftest.pdb: Trying the alternate PDT Rose parser based on EDG 4.4: /home/hills/seska/packages/pdt/x86_64//bin/edg44-c-roseparse /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.Configure PDT: Error parsing input file /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c Trying Older PDT Rose parser based on EDG 3.3: /home/hills/seska/packages/pdt/x86_64//bin/roseparse /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.Configure PDT: Error parsing input file /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c Error: Command(Executable) is -- Error: Full Command attempted is -- /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.Configure Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/PETSc.Configure -o /tmp/petsc-U9YCMv/PETSc.Configure/conftest.o Error: Compilation Failed Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -c -fPIC -g /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/PETSc.Configure -o /tmp/petsc-U9YCMv/PETSc.Configure/conftest.o Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue ret = 256 error message = {"/tmp/petsc-U9YCMv/PETSc.Configure/conftest.c", line 3: catastrophic error: could not open source file "Windows.h" #include ^ 1 catastrophic error detected in the compilation of "/tmp/petsc-U9YCMv/PETSc.Configure/conftest.c". Compilation terminated. "/tmp/petsc-U9YCMv/PETSc.Configure/conftest.c", line 3: catastrophic error: cannot open source file "Windows.h" #include ^ terminate called after throwing an instance of 'rose_exception' what(): Errors in Processing: (frontend_failed) Aborted (core dumped) "/tmp/petsc-U9YCMv/PETSc.Configure/conftest.c", line 3: catastrophic error: could not open source file "Windows.h" #include ^ "/tmp/petsc-U9YCMv/PETSc.Configure/conftest.c", line 3: internal error: assertion failed at: "../../../../../../../src/frontend/CxxFrontend/EDG/EDG_3.3/src/lexica l.c", line 3411 #include ^ Compilation aborted. Segmentation fault (core dumped) /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c:3:21: fatal error: Windows.h: No such file or directory compilation terminated. make: *** [all] Error 1 } Source: #include "confdefs.h" #include "conffix.h" #include #include int main() { int flags = O_BINARY;; return 0; } Defined "PATH_SEPARATOR" to "':'" Defined "REPLACE_DIR_SEPARATOR" to "'\\'" Defined "DIR_SEPARATOR" to "'/'" ================================================================================ TEST configureDefaultArch from PETSc.Configure(/home/hills/seska-hills/packages/petsc-3.4.2/config/PETSc/Configure.py:821) TESTING: configureDefaultArch from PETSc.Configure(config/PETSc/Configure.py:821) ================================================================================ TEST configureScript from PETSc.Configure(/home/hills/seska-hills/packages/petsc-3.4.2/config/PETSc/Configure.py:838) TESTING: configureScript from PETSc.Configure(config/PETSc/Configure.py:838) Output a script in the conf directory which will reproduce the configuration ================================================================================ TEST configureInstall from PETSc.Configure(/home/hills/seska-hills/packages/petsc-3.4.2/config/PETSc/Configure.py:873) TESTING: configureInstall from PETSc.Configure(config/PETSc/Configure.py:873) Setup the directories for installation Defined make rule "shared_install" with dependencies "" and code ['-@echo "Now to install the libraries do:"', '-@echo "make PETSC_DIR=${PETSC_DIR} PETSC_ARCH=${PETSC_ARCH} install"', '-@echo "========================================="'] ================================================================================ TEST configureGCOV from PETSc.Configure(/home/hills/seska-hills/packages/petsc-3.4.2/config/PETSc/Configure.py:887) TESTING: configureGCOV from PETSc.Configure(config/PETSc/Configure.py:887) ================================================================================ TEST configureFortranFlush from PETSc.Configure(/home/hills/seska-hills/packages/petsc-3.4.2/config/PETSc/Configure.py:892) TESTING: configureFortranFlush from PETSc.Configure(config/PETSc/Configure.py:892) Checking for function flush_ in library [''] ['-Wl,-rpath,/home/hills/seska/packages/openmpi/lib', '-L/home/hills/seska/packages/openmpi/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib', '-L/home/hills/seska/packages/tau/x86_64/lib', '-Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7', '-L/usr/lib/gcc/x86_64-linux-gnu/4.7', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-Wl,-rpath,/usr/lib/x86_64-linux-gnu', '-L/usr/lib/x86_64-linux-gnu', '-Wl,-rpath,/lib/x86_64-linux-gnu', '-L/lib/x86_64-linux-gnu', '-lmpichf90', '-lgfortran', '-lm', '-Wl,-rpath,/home/hills/seska/packages/openmpi/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib', '-Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-Wl,-rpath,/usr/lib/x86_64-linux-gnu', '-Wl,-rpath,/lib/x86_64-linux-gnu', '-lgfortran', '-lm', '-lquadmath', '-lm'] Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.libraries/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -o /tmp/petsc-U9YCMv/config.libraries/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char flush_(); int main() { flush_() ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Possible ERROR while running linker: /tmp/petsc-U9YCMv/config.libraries/conftest.o: In function `main': /tmp/petsc-U9YCMv/config.libraries/conftest.c:7: undefined reference to `flush_' collect2: error: ld returned 1 exit status /tmp/petsc-U9YCMv/config.libraries/conftest.o: In function `main': /tmp/petsc-U9YCMv/config.libraries/conftest.c:7: undefined reference to `flush_' collect2: error: ld returned 1 exit status make: *** [all] Error 1 output: Debug: Moving these libraries to the end of the link line: -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt ret = 256 error message = {/tmp/petsc-U9YCMv/config.libraries/conftest.o: In function `main': /tmp/petsc-U9YCMv/config.libraries/conftest.c:7: undefined reference to `flush_' collect2: error: ld returned 1 exit status /tmp/petsc-U9YCMv/config.libraries/conftest.o: In function `main': /tmp/petsc-U9YCMv/config.libraries/conftest.c:7: undefined reference to `flush_' collect2: error: ld returned 1 exit status make: *** [all] Error 1 } Pushing language C Popping language C in tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char flush_(); int main() { flush_() ; return 0; } Popping language C Checking for function flush__ in library [''] ['-Wl,-rpath,/home/hills/seska/packages/openmpi/lib', '-L/home/hills/seska/packages/openmpi/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib', '-L/home/hills/seska/packages/tau/x86_64/lib', '-Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7', '-L/usr/lib/gcc/x86_64-linux-gnu/4.7', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-Wl,-rpath,/usr/lib/x86_64-linux-gnu', '-L/usr/lib/x86_64-linux-gnu', '-Wl,-rpath,/lib/x86_64-linux-gnu', '-L/lib/x86_64-linux-gnu', '-lmpichf90', '-lgfortran', '-lm', '-Wl,-rpath,/home/hills/seska/packages/openmpi/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib', '-Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64', '-Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7', '-Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt', '-Wl,-rpath,/usr/lib/x86_64-linux-gnu', '-Wl,-rpath,/lib/x86_64-linux-gnu', '-lgfortran', '-lm', '-lquadmath', '-lm'] Pushing language C sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/config.libraries/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/config.libraries/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/config.libraries/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.libraries -o /tmp/petsc-U9YCMv/config.libraries/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char flush__(); int main() { flush__() ; return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Possible ERROR while running linker: /tmp/petsc-U9YCMv/config.libraries/conftest.o: In function `main': /tmp/petsc-U9YCMv/config.libraries/conftest.c:7: undefined reference to `flush__' collect2: error: ld returned 1 exit status /tmp/petsc-U9YCMv/config.libraries/conftest.o: In function `main': /tmp/petsc-U9YCMv/config.libraries/conftest.c:7: undefined reference to `flush__' collect2: error: ld returned 1 exit status make: *** [all] Error 1 output: Debug: Moving these libraries to the end of the link line: -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Moving these libraries to the end of the link line: Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Error: Tried looking for file: /tmp/petsc-U9YCMv/config.libraries/conftest Error: Failed to link with TAU options Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpichf90 -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt ret = 256 error message = {/tmp/petsc-U9YCMv/config.libraries/conftest.o: In function `main': /tmp/petsc-U9YCMv/config.libraries/conftest.c:7: undefined reference to `flush__' collect2: error: ld returned 1 exit status /tmp/petsc-U9YCMv/config.libraries/conftest.o: In function `main': /tmp/petsc-U9YCMv/config.libraries/conftest.c:7: undefined reference to `flush__' collect2: error: ld returned 1 exit status make: *** [all] Error 1 } Pushing language C Popping language C in tau_cc.sh -o /tmp/petsc-U9YCMv/config.libraries/conftest -fPIC -g /tmp/petsc-U9YCMv/config.libraries/conftest.o -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -lgfortran -lm -lquadmath -lm -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char flush__(); int main() { flush__() ; return 0; } Popping language C ================================================================================ TEST configureFeatureTestMacros from PETSc.Configure(/home/hills/seska-hills/packages/petsc-3.4.2/config/PETSc/Configure.py:636) TESTING: configureFeatureTestMacros from PETSc.Configure(config/PETSc/Configure.py:636) Checks if certain feature test macros are support sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/PETSc.Configure/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/PETSc.Configure/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.Configure PDT: Error: Couldn't create conftest.pdb: Trying the alternate PDT Rose parser based on EDG 4.4: /home/hills/seska/packages/pdt/x86_64//bin/edg44-c-roseparse /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.Configure PDT: Error parsing input file /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c Trying Older PDT Rose parser based on EDG 3.3: /home/hills/seska/packages/pdt/x86_64//bin/roseparse /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.Configure PDT: Error parsing input file /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c Error: Command(Executable) is -- Error: Full Command attempted is -- /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.Configure Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/PETSc.Configure -o /tmp/petsc-U9YCMv/PETSc.Configure/conftest.o Error: Compilation Failed Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -c -fPIC -g /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/PETSc.Configure -o /tmp/petsc-U9YCMv/PETSc.Configure/conftest.o Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Possible ERROR while running compiler: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.Configure PDT: Error: Couldn't create conftest.pdb: Trying the alternate PDT Rose parser based on EDG 4.4: /home/hills/seska/packages/pdt/x86_64//bin/edg44-c-roseparse /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.Configure PDT: Error parsing input file /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c Trying Older PDT Rose parser based on EDG 3.3: /home/hills/seska/packages/pdt/x86_64//bin/roseparse /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.Configure PDT: Error parsing input file /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c Error: Command(Executable) is -- Error: Full Command attempted is -- /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.Configure Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Debug: PDT failed, switching to compiler-based instrumentation Debug: Using compiler-based instrumentation Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/PETSc.Configure -o /tmp/petsc-U9YCMv/PETSc.Configure/conftest.o Error: Compilation Failed Error: Command(Executable) is -- gcc Error: Full Command attempted is -- gcc -c -fPIC -g /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -g -finstrument-functions -I/tmp/petsc-U9YCMv/PETSc.Configure -o /tmp/petsc-U9YCMv/PETSc.Configure/conftest.o Error: Reverting to a Regular Make To suppress this message and revert automatically, please add -optRevert to your TAU_OPTIONS environment variable Press Enter to continue ret = 256 error message = {"/tmp/petsc-U9YCMv/PETSc.Configure/conftest.c", line 4: catastrophic error: could not open source file "sysctl.h" #include ^ 1 catastrophic error detected in the compilation of "/tmp/petsc-U9YCMv/PETSc.Configure/conftest.c". Compilation terminated. "/tmp/petsc-U9YCMv/PETSc.Configure/conftest.c", line 4: catastrophic error: cannot open source file "sysctl.h" #include ^ terminate called after throwing an instance of 'rose_exception' what(): Errors in Processing: (frontend_failed) Aborted (core dumped) "/tmp/petsc-U9YCMv/PETSc.Configure/conftest.c", line 4: catastrophic error: could not open source file "sysctl.h" #include ^ "/tmp/petsc-U9YCMv/PETSc.Configure/conftest.c", line 4: internal error: assertion failed at: "../../../../../../../src/frontend/CxxFrontend/EDG/EDG_3.3/src/lexica l.c", line 3411 #include ^ Compilation aborted. Segmentation fault (core dumped) /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c:4:20: fatal error: sysctl.h: No such file or directory compilation terminated. make: *** [all] Error 1 } Source: #include "confdefs.h" #include "conffix.h" #define _POSIX_C_SOURCE 200112L #include int main() { ; return 0; } sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/PETSc.Configure/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/PETSc.Configure/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.Configure Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.Configure -o /tmp/petsc-U9YCMv/PETSc.Configure/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Possible ERROR while running compiler: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.Configure Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.Configure -o /tmp/petsc-U9YCMv/PETSc.Configure/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb error message = {/tmp/petsc-U9YCMv/PETSc.Configure/conftest.c:3:0: warning: "_BSD_SOURCE" redefined [enabled by default] In file included from /usr/include/x86_64-linux-gnu/sys/types.h:25:0, from /home/hills/seska/packages/tau/include/Profile/Profiler.h:28, from conftest.inst.c:1: /usr/include/features.h:188:0: note: this is the location of the previous definition } Source: #include "confdefs.h" #include "conffix.h" #define _BSD_SOURCE #include int main() { ; return 0; } Defined "_BSD_SOURCE" to "1" sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/PETSc.Configure/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/PETSc.Configure/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.Configure Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.Configure -o /tmp/petsc-U9YCMv/PETSc.Configure/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" #define _GNU_SOURCE #include int main() { cpu_set_t mset; CPU_ZERO(&mset);; return 0; } Defined "_GNU_SOURCE" to "1" ================================================================================ TEST configureAtoll from PETSc.Configure(/home/hills/seska-hills/packages/petsc-3.4.2/config/PETSc/Configure.py:645) TESTING: configureAtoll from PETSc.Configure(config/PETSc/Configure.py:645) Checks if atoll exists sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/PETSc.Configure/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/PETSc.Configure/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.Configure Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.Configure -o /tmp/petsc-U9YCMv/PETSc.Configure/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Possible ERROR while running compiler: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.Configure Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.Configure -o /tmp/petsc-U9YCMv/PETSc.Configure/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb error message = {/tmp/petsc-U9YCMv/PETSc.Configure/conftest.c:3:0: warning: "_POSIX_C_SOURCE" redefined [enabled by default] In file included from /usr/include/x86_64-linux-gnu/sys/types.h:25:0, from /home/hills/seska/packages/tau/include/Profile/Profiler.h:28, from conftest.inst.c:1: /usr/include/features.h:231:0: note: this is the location of the previous definition } Source: #include "confdefs.h" #include "conffix.h" #define _POSIX_C_SOURCE 200112L #include int main() { long v = atoll("25"); return 0; } Pushing language C Popping language C sh: tau_cc.sh -o /tmp/petsc-U9YCMv/PETSc.Configure/conftest -fPIC -g /tmp/petsc-U9YCMv/PETSc.Configure/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl Executing: tau_cc.sh -o /tmp/petsc-U9YCMv/PETSc.Configure/conftest -fPIC -g /tmp/petsc-U9YCMv/PETSc.Configure/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl sh: Debug: Moving these libraries to the end of the link line: -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Debug: Linking with TAU Options Executing> gcc -o /tmp/petsc-U9YCMv/PETSc.Configure/conftest -fPIC -g /tmp/petsc-U9YCMv/PETSc.Configure/conftest.o -ldl -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lopa -lmpl -lrt -lpthread -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -lstdc++ -lgcc_s -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -L/home/hills/seska/packages/openmpi/lib -lmpi_f77 -L/home/hills/seska/packages/tau/x86_64/lib -lTauMpi-mpi-pdt -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/tau/x86_64/lib -ltau-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -lbfd -liberty -Wl,--export-dynamic -lrt -L/home/hills/seska/packages/openmpi/lib -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g3 -fno-inline -O0 -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -lmpi_f77 -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -ldl -lm -L/usr/lib/gcc/x86_64-linux-gnu/4.7/ -lstdc++ -lgcc_s -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt Defined "HAVE_ATOLL" to "1" Defined make rule "remote" with dependencies "" and code [] Defined make rule "remoteclean" with dependencies "" and code [] Pushing language C Defined make macro "CC_FLAGS" to " -fPIC -g " Popping language C Defined make macro "CPP_FLAGS" to " " Pushing language C Defined make macro "PCC" to "tau_cc.sh" Defined make macro "PCC_FLAGS" to " -fPIC -g " Popping language C Defined make macro "CC_SUFFIX" to "o" Pushing language C Defined make macro "PCC_LINKER" to "tau_cc.sh" Defined make macro "PCC_LINKER_FLAGS" to " -fPIC -g" Popping language C Defined make macro "CC_LINKER_SUFFIX" to "" Pushing language FC Defined "HAVE_FORTRAN" to "1" Defined make macro "FPP_FLAGS" to "" Defined make macro "FC_FLAGS" to " -fPIC -Wall -Wno-unused-variable -Wno-unused-dummy-argument -g " Popping language FC Defined make macro "FC_SUFFIX" to "o" Pushing language FC sh: mpif90 -V Executing: mpif90 -V sh: Defined make macro "FC_LINKER" to "mpif90" Defined make macro "FC_LINKER_FLAGS" to " -fPIC -Wall -Wno-unused-variable -Wno-unused-dummy-argument -g " Popping language FC Defined make macro "FC_MODULE_FLAG" to "-I" Defined make macro "FC_MODULE_OUTPUT_FLAG" to "-J" Pushing language C Defined make macro "SL_LINKER" to "tau_cc.sh" Defined make macro "SL_LINKER_FLAGS" to "${PCC_LINKER_FLAGS}" Popping language C Defined make macro "SL_LINKER_SUFFIX" to "so" Defined "SLSUFFIX" to ""so"" Defined make macro "SL_LINKER_LIBS" to "${PETSC_EXTERNAL_LIB_BASIC}" Defined make macro "PETSC_LANGUAGE" to "CONLY" Defined make macro "PETSC_SCALAR" to "real" Defined make macro "PETSC_PRECISION" to "double" sh: CC -VV Executing: CC -VV sh: Defined "USE_SOCKET_VIEWER" to "1" sh: tau_cc.sh -c -o /tmp/petsc-U9YCMv/PETSc.Configure/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c Executing: tau_cc.sh -c -o /tmp/petsc-U9YCMv/PETSc.Configure/conftest.o -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -fPIC -g /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c sh: Debug: Parsing with PDT Parser Executing> /home/hills/seska/packages/pdt/x86_64/bin/cparse /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c -I/home/hills/seska/packages/tau/include -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.Configure Debug: Instrumenting with TAU Executing> /home/hills/seska/packages/tau/x86_64/bin/tau_instrumentor conftest.pdb /tmp/petsc-U9YCMv/PETSc.Configure/conftest.c -o conftest.inst.c -c Debug: Compiling with Instrumented Code Executing> gcc -c -fPIC -g conftest.inst.c -I/tmp/petsc-U9YCMv/config.setCompilers -I/tmp/petsc-U9YCMv/config.compilers -I/tmp/petsc-U9YCMv/config.headers -I/tmp/petsc-U9YCMv/PETSc.utilities.cacheDetails -I/tmp/petsc-U9YCMv/PETSc.utilities.missing -I/tmp/petsc-U9YCMv/config.functions -I/tmp/petsc-U9YCMv/PETSc.utilities.scalarTypes -I/tmp/petsc-U9YCMv/config.packages.MPI -I/tmp/petsc-U9YCMv/PETSc.packages.pthread -I/tmp/petsc-U9YCMv/config.atomics -I/tmp/petsc-U9YCMv/config.types -I/tmp/petsc-U9YCMv/PETSc.Configure -I/tmp/petsc-U9YCMv/config.libraries -DPROFILING_ON -DTAU_GNU -DTAU_DOT_H_LESS_HEADERS -DTAU_MPI -DTAU_UNIFY -DTAU_MPI_THREADED -DTAU_LINUX_TIMERS -DTAU_MPIGREQUEST -DTAU_MPIDATAREP -DTAU_MPIERRHANDLER -DTAU_MPIATTRFUNCTION -DTAU_MPITYPEEX -DTAU_MPIADDERROR -DTAU_LARGEFILE -D_LARGEFILE64_SOURCE -DTAU_BFD -DTAU_MPIFILE -DHAVE_GNU_DEMANGLE -DHAVE_TR1_HASH_MAP -DTAU_SS_ALLOC_SUPPORT -DEBS_CLOCK_RES=1 -DTAU_STRSIGNAL_OK -DTAU_TRACK_LD_LOADER -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/tmp/petsc-U9YCMv/PETSc.Configure -o /tmp/petsc-U9YCMv/PETSc.Configure/conftest.o Looking for file: conftest.o Debug: cleaning inst file Executing> /bin/rm -f conftest.inst.c Debug: cleaning PDB file Executing> /bin/rm -f conftest.pdb Successful compile: Source: #include "confdefs.h" #include "conffix.h" #include int main() { setsockopt(0,SOL_SOCKET,SO_REUSEADDR,0,0); return 0; } Defined "HAVE_SO_REUSEADDR" to "1" Defined "HAVE_BLASLAPACK" to "1" Defined make macro "BLASLAPACK_LIB" to "-Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lflapack -lfblas" Defined make macro "BLASLAPACK_INCLUDE" to "" Defined "HAVE_PTHREAD" to "1" Defined make macro "PTHREAD_LIB" to "-lpthread" Defined make macro "PTHREAD_INCLUDE" to "" Defined "HAVE_MPI" to "1" Defined make macro "MPI_LIB" to "" Defined make macro "MPI_INCLUDE" to "-I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include" Defined make macro "PETSC_WITH_EXTERNAL_LIB" to "-L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lpetsc -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lflapack -lfblas -lpthread -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -lgfortran -lm -lquadmath -lm -lmpichcxx -ldl -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt -lbfd -liberty -lstdc++ -lgcc_s -ldl " Defined make macro "PETSC_EXTERNAL_LIB_BASIC" to "-Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lflapack -lfblas -lpthread -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -lgfortran -lm -lquadmath -lm -lmpichcxx -ldl -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt -lbfd -liberty -lstdc++ -lgcc_s -ldl " Defined make macro "PETSC_CC_INCLUDES" to "-I/home/hills/seska/packages/petsc/include -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib" Pushing language FC Popping language FC Pushing language FC Popping language FC Pushing language FC Popping language FC Pushing language FC Popping language FC Pushing language FC Popping language FC Pushing language FC Popping language FC Pushing language FC Popping language FC Pushing language FC Popping language FC Pushing language FC Popping language FC Defined make macro "PETSC_FC_INCLUDES" to "-I/home/hills/seska/packages/petsc/include -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib" Defined make macro "DESTDIR" to "pwd" Defined "LIB_DIR" to ""pwd/lib"" Defined make macro "LIBNAME" to "${INSTALL_LIB_DIR}/libpetsc.${AR_LIB_SUFFIX}" Defined make macro "SHLIBS" to "libpetsc" Defined make macro "PETSC_LIB_BASIC" to "-lpetsc" Defined make macro "PETSC_KSP_LIB_BASIC" to "-lpetsc" Defined make macro "PETSC_TS_LIB_BASIC" to "-lpetsc" Defined "USE_SINGLE_LIBRARY" to "1" Defined make macro "PETSC_SYS_LIB" to "${C_SH_LIB_PATH} ${PETSC_WITH_EXTERNAL_LIB}" Defined make macro "PETSC_VEC_LIB" to "${C_SH_LIB_PATH} ${PETSC_WITH_EXTERNAL_LIB}" Defined make macro "PETSC_MAT_LIB" to "${C_SH_LIB_PATH} ${PETSC_WITH_EXTERNAL_LIB}" Defined make macro "PETSC_DM_LIB" to "${C_SH_LIB_PATH} ${PETSC_WITH_EXTERNAL_LIB}" Defined make macro "PETSC_KSP_LIB" to "${C_SH_LIB_PATH} ${PETSC_WITH_EXTERNAL_LIB}" Defined make macro "PETSC_SNES_LIB" to "${C_SH_LIB_PATH} ${PETSC_WITH_EXTERNAL_LIB}" Defined make macro "PETSC_TS_LIB" to "${C_SH_LIB_PATH} ${PETSC_WITH_EXTERNAL_LIB}" Defined make macro "PETSC_CHARACTERISTIC_LIB" to "${C_SH_LIB_PATH} ${PETSC_WITH_EXTERNAL_LIB}" Defined make macro "PETSC_LIB" to "${C_SH_LIB_PATH} ${PETSC_WITH_EXTERNAL_LIB}" Defined make macro "PETSC_CONTRIB" to "${C_SH_LIB_PATH} ${PETSC_WITH_EXTERNAL_LIB}" Defined make macro "CONFIGURE_OPTIONS" to "--prefix=pwd --with-mpi=1 --with-cc=tau_cc.sh --with-cxx=mpicxx --with-fc=mpif90 --with-blas-lapack-dir=/home/hills/seska/packages/fblaslapack" Pushing language C Popping language C Pushing language FC Popping language FC Pushing language C Popping language C Pushing language FC Popping language FC sh: ['/usr/bin/cmake', '--version'] Executing: ['/usr/bin/cmake', '--version'] sh: cmake version 2.8.10.1 Pushing language C Popping language C Pushing language FC Popping language FC Contents of initial cache file /home/hills/seska/packages/petsc/linux-gnu-cxx-opt/initial_cache_file.cmake : SET (CMAKE_C_COMPILER tau_cc.sh CACHE FILEPATH "Dummy comment" FORCE) SET (CMAKE_C_FLAGS " -fPIC -g " CACHE STRING "Dummy comment" FORCE) SET (PETSC_CUDA_HOST_FLAGS ,-fPIC,-g CACHE STRING "Dummy comment" FORCE) SET (CMAKE_Fortran_COMPILER mpif90 CACHE FILEPATH "Dummy comment" FORCE) SET (CMAKE_Fortran_FLAGS " -fPIC -Wall -Wno-unused-variable -Wno-unused-dummy-argument -g " CACHE STRING "Dummy comment" FORCE) SET (CMAKE_AR /usr/bin/ar CACHE FILEPATH "Dummy comment" FORCE) SET (CMAKE_RANLIB /usr/bin/ranlib CACHE FILEPATH "Dummy comment" FORCE) Removing: /home/hills/seska/packages/petsc/linux-gnu-cxx-opt/CMakeCache.txt Removing: /home/hills/seska/packages/petsc/linux-gnu-cxx-opt/CMakeFiles/2.8.10.1 Invoking: ['/usr/bin/cmake', '--trace', '--debug-output', '-C/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/initial_cache_file.cmake', '-DPETSC_CMAKE_ARCH:STRING=linux-gnu-cxx-opt', '/home/hills/seska/packages/petsc'] sh: ['/usr/bin/cmake', '--trace', '--debug-output', '-C/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/initial_cache_file.cmake', '-DPETSC_CMAKE_ARCH:STRING=linux-gnu-cxx-opt', '/home/hills/seska/packages/petsc'] Executing: ['/usr/bin/cmake', '--trace', '--debug-output', '-C/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/initial_cache_file.cmake', '-DPETSC_CMAKE_ARCH:STRING=linux-gnu-cxx-opt', '/home/hills/seska/packages/petsc'] sh: Running with trace output on. Running with debug output on. -- The C compiler identification is GNU 4.7.3 Called from: [2] /usr/share/cmake-2.8/Modules/CMakeDetermineCCompiler.cmake [1] /home/hills/seska/packages/petsc/CMakeLists.txt -- Check for working C compiler: /home/hills/seska/packages/tau/x86_64/bin/tau_cc.sh Called from: [2] /usr/share/cmake-2.8/Modules/CMakeTestCCompiler.cmake [1] /home/hills/seska/packages/petsc/CMakeLists.txt -- Check for working C compiler: /home/hills/seska/packages/tau/x86_64/bin/tau_cc.sh -- works Called from: [2] /usr/share/cmake-2.8/Modules/CMakeTestCCompiler.cmake [1] /home/hills/seska/packages/petsc/CMakeLists.txt -- Detecting C compiler ABI info Called from: [2] /usr/share/cmake-2.8/Modules/CMakeTestCCompiler.cmake [1] /home/hills/seska/packages/petsc/CMakeLists.txt -- Detecting C compiler ABI info - done Called from: [2] /usr/share/cmake-2.8/Modules/CMakeTestCCompiler.cmake [1] /home/hills/seska/packages/petsc/CMakeLists.txt -- The Fortran compiler identification is GNU Called from: [2] /usr/share/cmake-2.8/Modules/CMakeDetermineFortranCompiler.cmake [1] /home/hills/seska/packages/petsc/CMakeLists.txt -- Check for working Fortran compiler: /home/hills/seska/packages/petsc/linux-gnu-cxx-opt/bin/mpif90 Called from: [2] /usr/share/cmake-2.8/Modules/CMakeTestFortranCompiler.cmake [1] /home/hills/seska/packages/petsc/CMakeLists.txt -- Check for working Fortran compiler: /home/hills/seska/packages/petsc/linux-gnu-cxx-opt/bin/mpif90 -- works Called from: [2] /usr/share/cmake-2.8/Modules/CMakeTestFortranCompiler.cmake [1] /home/hills/seska/packages/petsc/CMakeLists.txt -- Detecting Fortran compiler ABI info Called from: [2] /usr/share/cmake-2.8/Modules/CMakeTestFortranCompiler.cmake [1] /home/hills/seska/packages/petsc/CMakeLists.txt -- Detecting Fortran compiler ABI info - done Called from: [2] /usr/share/cmake-2.8/Modules/CMakeTestFortranCompiler.cmake [1] /home/hills/seska/packages/petsc/CMakeLists.txt -- Checking whether /home/hills/seska/packages/petsc/linux-gnu-cxx-opt/bin/mpif90 supports Fortran 90 Called from: [2] /usr/share/cmake-2.8/Modules/CMakeTestFortranCompiler.cmake [1] /home/hills/seska/packages/petsc/CMakeLists.txt -- Checking whether /home/hills/seska/packages/petsc/linux-gnu-cxx-opt/bin/mpif90 supports Fortran 90 -- yes Called from: [2] /usr/share/cmake-2.8/Modules/CMakeTestFortranCompiler.cmake [1] /home/hills/seska/packages/petsc/CMakeLists.txt -- The CXX compiler identification is GNU 4.7.3 Called from: [2] /usr/share/cmake-2.8/Modules/CMakeDetermineCXXCompiler.cmake [1] /home/hills/seska/packages/petsc/CMakeLists.txt -- Check for working CXX compiler: /usr/bin/c++ Called from: [2] /usr/share/cmake-2.8/Modules/CMakeTestCXXCompiler.cmake [1] /home/hills/seska/packages/petsc/CMakeLists.txt -- Check for working CXX compiler: /usr/bin/c++ -- works Called from: [2] /usr/share/cmake-2.8/Modules/CMakeTestCXXCompiler.cmake [1] /home/hills/seska/packages/petsc/CMakeLists.txt -- Detecting CXX compiler ABI info Called from: [2] /usr/share/cmake-2.8/Modules/CMakeTestCXXCompiler.cmake [1] /home/hills/seska/packages/petsc/CMakeLists.txt -- Detecting CXX compiler ABI info - done Called from: [2] /usr/share/cmake-2.8/Modules/CMakeTestCXXCompiler.cmake [1] /home/hills/seska/packages/petsc/CMakeLists.txt -- Configuring done -- Generating /home/hills/seska-hills/packages/petsc-3.4.2/linux-gnu-cxx-opt -- Generating done -- Build files have been written to: /home/hills/seska-hills/packages/petsc-3.4.2/linux-gnu-cxx-opt CMake configured successfully, using as default build Defined make macro "PETSC_BUILD_USING_CMAKE" to "1" Pushing language C Popping language C Pushing language FC Popping language FC ================================================================================ ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.petsc4py(/home/hills/seska-hills/packages/petsc-3.4.2/config/PETSc/packages/petsc4py.py:65) TESTING: alternateConfigureLibrary from PETSc.packages.petsc4py(config/PETSc/packages/petsc4py.py:65) Defined make rule "petsc4py" with dependencies "" and code [] ================================================================================ TEST alternateConfigureLibrary from PETSc.packages.mpi4py(/home/hills/seska-hills/packages/petsc-3.4.2/config/PETSc/packages/mpi4py.py:49) TESTING: alternateConfigureLibrary from PETSc.packages.mpi4py(config/PETSc/packages/mpi4py.py:49) Defined make rule "mpi4py" with dependencies "" and code [] Defined make rule "mpi4py_noinstall" with dependencies "" and code [] **** linux-gnu-cxx-opt/conf/petscvariables **** MPIFC_SHOW = gfortran -fPIC -Wall -Wno-unused-variable -Wno-unused-dummy-argument -g -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpichf90 -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread MPICXX_SHOW = g++ -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g -fPIC -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpichcxx -Wl,-rpath -Wl,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lmpich -lopa -lmpl -lrt -lpthread FAST_AR_FLAGS = Scq AR_FLAGS = cr FC_MODULE_OUTPUT_FLAG = -J PETSC_LANGUAGE = CONLY FC_LINKER_FLAGS = -fPIC -Wall -Wno-unused-variable -Wno-unused-dummy-argument -g LIBNAME = ${INSTALL_LIB_DIR}/libpetsc.${AR_LIB_SUFFIX} SL_LINKER = tau_cc.sh PETSC_BUILD_USING_CMAKE = 1 CC_FLAGS = -fPIC -g PETSC_PRECISION = double PETSC_LIB_BASIC = -lpetsc FC_FLAGS = -fPIC -Wall -Wno-unused-variable -Wno-unused-dummy-argument -g BLASLAPACK_LIB = -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lflapack -lfblas PETSC_MAT_LIB = ${C_SH_LIB_PATH} ${PETSC_WITH_EXTERNAL_LIB} PCC = tau_cc.sh SL_LINKER_LIBS = ${PETSC_EXTERNAL_LIB_BASIC} MPI_LIB = PETSC_EXTERNAL_LIB_BASIC = -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lflapack -lfblas -lpthread -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -lgfortran -lm -lquadmath -lm -lmpichcxx -ldl -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt -lbfd -liberty -lstdc++ -lgcc_s -ldl SL_LINKER_FLAGS = ${PCC_LINKER_FLAGS} CC_SUFFIX = o PETSC_LIB = ${C_SH_LIB_PATH} ${PETSC_WITH_EXTERNAL_LIB} SHLIBS = libpetsc CONFIGURE_OPTIONS = --prefix=pwd --with-mpi=1 --with-cc=tau_cc.sh --with-cxx=mpicxx --with-fc=mpif90 --with-blas-lapack-dir=/home/hills/seska/packages/fblaslapack PETSC_CHARACTERISTIC_LIB = ${C_SH_LIB_PATH} ${PETSC_WITH_EXTERNAL_LIB} PTHREAD_LIB = -lpthread PETSC_SCALAR = real PETSC_FC_INCLUDES = -I/home/hills/seska/packages/petsc/include -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib CPP_FLAGS = PETSC_KSP_LIB_BASIC = -lpetsc FPP_FLAGS = FC_LINKER = mpif90 PETSC_KSP_LIB = ${C_SH_LIB_PATH} ${PETSC_WITH_EXTERNAL_LIB} PCC_LINKER = tau_cc.sh PCC_LINKER_FLAGS = -fPIC -g PETSC_CONTRIB = ${C_SH_LIB_PATH} ${PETSC_WITH_EXTERNAL_LIB} PETSC_CC_INCLUDES = -I/home/hills/seska/packages/petsc/include -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib PETSC_SYS_LIB = ${C_SH_LIB_PATH} ${PETSC_WITH_EXTERNAL_LIB} PCC_FLAGS = -fPIC -g PTHREAD_INCLUDE = PETSC_TS_LIB = ${C_SH_LIB_PATH} ${PETSC_WITH_EXTERNAL_LIB} BLASLAPACK_INCLUDE = PETSC_TS_LIB_BASIC = -lpetsc PETSC_VEC_LIB = ${C_SH_LIB_PATH} ${PETSC_WITH_EXTERNAL_LIB} CC_LINKER_SUFFIX = SL_LINKER_SUFFIX = so PETSC_DM_LIB = ${C_SH_LIB_PATH} ${PETSC_WITH_EXTERNAL_LIB} DESTDIR = pwd FC_MODULE_FLAG = -I PETSC_WITH_EXTERNAL_LIB = -L/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -lpetsc -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lflapack -lfblas -lpthread -Wl,-rpath,/home/hills/seska/packages/openmpi/lib -L/home/hills/seska/packages/openmpi/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib -L/home/hills/seska/packages/tau/x86_64/lib -Wl,-rpath,/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -L/home/hills/seska/packages/tau/x86_64/binutils-2.23.2/lib64 -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 -L/usr/lib/gcc/x86_64-linux-gnu/4.7 -Wl,-rpath,/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -L/home/hills/seska/packages/tau/x86_64/lib/static-mpi-pdt -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu -lmpichf90 -lgfortran -lm -lgfortran -lm -lquadmath -lm -lmpichcxx -ldl -lmpi_f77 -lTauMpi-mpi-pdt -lmpich -lopa -lmpl -lrt -lpthread -lmpi -lmpi_cxx -lmpi_f90 -ltau-mpi-pdt -lbfd -liberty -lstdc++ -lgcc_s -ldl MPI_INCLUDE = -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include FC_SUFFIX = o PETSC_SNES_LIB = ${C_SH_LIB_PATH} ${PETSC_WITH_EXTERNAL_LIB} CC_LINKER_SLFLAG = -Wl,-rpath, CC = tau_cc.sh RANLIB = /usr/bin/ranlib DYNAMICLINKER = tau_cc.sh CXX = mpicxx FC = mpif90 CXXCPP = mpicxx -E FC_LINKER_SLFLAG = -Wl,-rpath, CPP = tau_cc.sh -E AR_LIB_SUFFIX = a LD_SHARED = tau_cc.sh AR = /usr/bin/ar DIR = /home/hills/seska/packages/petsc SHELL = /bin/sh MAKE_NP = 5 GZIP = /bin/gzip MV = /bin/mv PYTHON = /usr/bin/python MAKE = /usr/bin/make MKDIR = /bin/mkdir -p SEDINPLACE = /bin/sed -i OMAKE = /usr/bin/make --no-print-directory SED = /bin/sed RM = /bin/rm -f DIFF = /usr/bin/diff -w GREP = /bin/grep CP = /bin/cp STRINGS = /usr/bin/strings MPIEXEC = /home/hills/seska/packages/openmpi/bin/mpiexec BUILDSHAREDLIB = yes GDB = /usr/bin/gdb DSYMUTIL = true TEST_RUNS = C Fortran F90 F90_NoComplex F2003 Fortran_NoComplex C_NoComplex DATAFILESPATH = CMAKE = /usr/bin/cmake CMAKE = /usr/bin/cmake **** linux-gnu-cxx-opt/conf/petscrules **** shared_install: -@echo "Now to install the libraries do:" -@echo "make PETSC_DIR=${PETSC_DIR} PETSC_ARCH=${PETSC_ARCH} install" -@echo "=========================================" remoteclean: remote: libc: ${LIBNAME}(${OBJSC}) libcu: ${LIBNAME}(${OBJSCU}) libf: ${OBJSF} -${AR} ${AR_FLAGS} ${LIBNAME} ${OBJSF} shared_arch: shared_linux .F.a: ${PETSC_MAKE_STOP_ON_ERROR}${FC} -c ${FFLAGS} ${FC_FLAGS} ${FCPPFLAGS} $< -${AR} ${AR_FLAGS} ${LIBNAME} $*.o -${RM} $*.o .f.o .f90.o .f95.o: ${PETSC_MAKE_STOP_ON_ERROR}${FC} -c ${FFLAGS} ${FC_FLAGS} -o $@ $< .f.a: ${PETSC_MAKE_STOP_ON_ERROR}${FC} -c ${FFLAGS} ${FC_FLAGS} $< -${AR} ${AR_FLAGS} ${LIBNAME} $*.o -${RM} $*.o .F.o .F90.o .F95.o: ${PETSC_MAKE_STOP_ON_ERROR}${FC} -c ${FFLAGS} ${FC_FLAGS} ${FCPPFLAGS} -o $@ $< mpi4py_noinstall: mpi4py: petsc4py: **** linux-gnu-cxx-opt/include/petscconf.h **** #if !defined(INCLUDED_UNKNOWN) #define INCLUDED_UNKNOWN #ifndef IS_COLORING_MAX #define IS_COLORING_MAX 65535 #endif #ifndef STDC_HEADERS #define STDC_HEADERS 1 #endif #ifndef MPIU_COLORING_VALUE #define MPIU_COLORING_VALUE MPI_UNSIGNED_SHORT #endif #ifndef PETSC_UINTPTR_T #define PETSC_UINTPTR_T uintptr_t #endif #ifndef PETSC_HAVE_PTHREAD #define PETSC_HAVE_PTHREAD 1 #endif #ifndef PETSC_DEPRECATED #define PETSC_DEPRECATED(why) __attribute((deprecated(why))) #endif #ifndef PETSC_STATIC_INLINE #define PETSC_STATIC_INLINE static inline #endif #ifndef PETSC_REPLACE_DIR_SEPARATOR #define PETSC_REPLACE_DIR_SEPARATOR '\\' #endif #ifndef PETSC_RESTRICT #define PETSC_RESTRICT __restrict__ #endif #ifndef PETSC_HAVE_SO_REUSEADDR #define PETSC_HAVE_SO_REUSEADDR 1 #endif #ifndef PETSC_HAVE_MPI #define PETSC_HAVE_MPI 1 #endif #ifndef PETSC_PREFETCH_HINT_T2 #define PETSC_PREFETCH_HINT_T2 _MM_HINT_T2 #endif #ifndef PETSC_PREFETCH_HINT_T0 #define PETSC_PREFETCH_HINT_T0 _MM_HINT_T0 #endif #ifndef PETSC_PREFETCH_HINT_T1 #define PETSC_PREFETCH_HINT_T1 _MM_HINT_T1 #endif #ifndef PETSC__GNU_SOURCE #define PETSC__GNU_SOURCE 1 #endif #ifndef PETSC_HAVE_FORTRAN #define PETSC_HAVE_FORTRAN 1 #endif #ifndef PETSC_LIB_DIR #define PETSC_LIB_DIR "pwd/lib" #endif #ifndef PETSC_USE_SOCKET_VIEWER #define PETSC_USE_SOCKET_VIEWER 1 #endif #ifndef PETSC_SLSUFFIX #define PETSC_SLSUFFIX "so" #endif #ifndef PETSC_FUNCTION_NAME_CXX #define PETSC_FUNCTION_NAME_CXX __func__ #endif #ifndef PETSC_HAVE_ATOLL #define PETSC_HAVE_ATOLL 1 #endif #ifndef PETSC_HAVE_DOUBLE_ALIGN_MALLOC #define PETSC_HAVE_DOUBLE_ALIGN_MALLOC 1 #endif #ifndef PETSC_UNUSED #define PETSC_UNUSED __attribute((unused)) #endif #ifndef PETSC_FUNCTION_NAME_C #define PETSC_FUNCTION_NAME_C __func__ #endif #ifndef PETSC_USE_SINGLE_LIBRARY #define PETSC_USE_SINGLE_LIBRARY 1 #endif #ifndef PETSC_HAVE_BUILTIN_EXPECT #define PETSC_HAVE_BUILTIN_EXPECT 1 #endif #ifndef PETSC_DIR_SEPARATOR #define PETSC_DIR_SEPARATOR '/' #endif #ifndef PETSC_PATH_SEPARATOR #define PETSC_PATH_SEPARATOR ':' #endif #ifndef PETSC__BSD_SOURCE #define PETSC__BSD_SOURCE 1 #endif #ifndef PETSC_HAVE_XMMINTRIN_H #define PETSC_HAVE_XMMINTRIN_H 1 #endif #ifndef PETSC_PREFETCH_HINT_NTA #define PETSC_PREFETCH_HINT_NTA _MM_HINT_NTA #endif #ifndef PETSC_Prefetch #define PETSC_Prefetch(a,b,c) _mm_prefetch((const char*)(a),(c)) #endif #ifndef PETSC_HAVE_BLASLAPACK #define PETSC_HAVE_BLASLAPACK 1 #endif #ifndef PETSC_HAVE_FLOAT_H #define PETSC_HAVE_FLOAT_H 1 #endif #ifndef PETSC_HAVE_STRING_H #define PETSC_HAVE_STRING_H 1 #endif #ifndef PETSC_HAVE_SYS_TIMES_H #define PETSC_HAVE_SYS_TIMES_H 1 #endif #ifndef PETSC_HAVE_SYS_TYPES_H #define PETSC_HAVE_SYS_TYPES_H 1 #endif #ifndef PETSC_HAVE_ENDIAN_H #define PETSC_HAVE_ENDIAN_H 1 #endif #ifndef PETSC_HAVE_SYS_PROCFS_H #define PETSC_HAVE_SYS_PROCFS_H 1 #endif #ifndef PETSC_HAVE_DLFCN_H #define PETSC_HAVE_DLFCN_H 1 #endif #ifndef PETSC_HAVE_SCHED_H #define PETSC_HAVE_SCHED_H 1 #endif #ifndef PETSC_HAVE_STDINT_H #define PETSC_HAVE_STDINT_H 1 #endif #ifndef PETSC_HAVE_LINUX_KERNEL_H #define PETSC_HAVE_LINUX_KERNEL_H 1 #endif #ifndef PETSC_HAVE_TIME_H #define PETSC_HAVE_TIME_H 1 #endif #ifndef PETSC_HAVE_MATH_H #define PETSC_HAVE_MATH_H 1 #endif #ifndef PETSC_HAVE_STDLIB_H #define PETSC_HAVE_STDLIB_H 1 #endif #ifndef PETSC_HAVE_SYS_PARAM_H #define PETSC_HAVE_SYS_PARAM_H 1 #endif #ifndef PETSC_HAVE_PTHREAD_H #define PETSC_HAVE_PTHREAD_H 1 #endif #ifndef PETSC_HAVE_UNISTD_H #define PETSC_HAVE_UNISTD_H 1 #endif #ifndef PETSC_HAVE_SYS_WAIT_H #define PETSC_HAVE_SYS_WAIT_H 1 #endif #ifndef PETSC_HAVE_SETJMP_H #define PETSC_HAVE_SETJMP_H 1 #endif #ifndef PETSC_HAVE_LIMITS_H #define PETSC_HAVE_LIMITS_H 1 #endif #ifndef PETSC_HAVE_SYS_UTSNAME_H #define PETSC_HAVE_SYS_UTSNAME_H 1 #endif #ifndef PETSC_HAVE_NETINET_IN_H #define PETSC_HAVE_NETINET_IN_H 1 #endif #ifndef PETSC_HAVE_FENV_H #define PETSC_HAVE_FENV_H 1 #endif #ifndef PETSC_HAVE_SYS_SOCKET_H #define PETSC_HAVE_SYS_SOCKET_H 1 #endif #ifndef PETSC_HAVE_MEMORY_H #define PETSC_HAVE_MEMORY_H 1 #endif #ifndef PETSC_HAVE_SEARCH_H #define PETSC_HAVE_SEARCH_H 1 #endif #ifndef PETSC_HAVE_SYS_RESOURCE_H #define PETSC_HAVE_SYS_RESOURCE_H 1 #endif #ifndef PETSC_TIME_WITH_SYS_TIME #define PETSC_TIME_WITH_SYS_TIME 1 #endif #ifndef PETSC_HAVE_NETDB_H #define PETSC_HAVE_NETDB_H 1 #endif #ifndef PETSC_HAVE_MALLOC_H #define PETSC_HAVE_MALLOC_H 1 #endif #ifndef PETSC_HAVE_PWD_H #define PETSC_HAVE_PWD_H 1 #endif #ifndef PETSC_HAVE_FCNTL_H #define PETSC_HAVE_FCNTL_H 1 #endif #ifndef PETSC_HAVE_STRINGS_H #define PETSC_HAVE_STRINGS_H 1 #endif #ifndef PETSC_HAVE_SYS_SYSINFO_H #define PETSC_HAVE_SYS_SYSINFO_H 1 #endif #ifndef PETSC_HAVE_SYS_TIME_H #define PETSC_HAVE_SYS_TIME_H 1 #endif #ifndef PETSC_USING_F90 #define PETSC_USING_F90 1 #endif #ifndef PETSC_USING_F2003 #define PETSC_USING_F2003 1 #endif #ifndef PETSC_HAVE_RTLD_NOW #define PETSC_HAVE_RTLD_NOW 1 #endif #ifndef PETSC_HAVE_RTLD_LOCAL #define PETSC_HAVE_RTLD_LOCAL 1 #endif #ifndef PETSC_HAVE_RTLD_LAZY #define PETSC_HAVE_RTLD_LAZY 1 #endif #ifndef PETSC_C_STATIC_INLINE #define PETSC_C_STATIC_INLINE static inline #endif #ifndef PETSC_HAVE_FORTRAN_UNDERSCORE #define PETSC_HAVE_FORTRAN_UNDERSCORE 1 #endif #ifndef PETSC_HAVE_CXX_NAMESPACE #define PETSC_HAVE_CXX_NAMESPACE 1 #endif #ifndef PETSC_HAVE_RTLD_GLOBAL #define PETSC_HAVE_RTLD_GLOBAL 1 #endif #ifndef PETSC_C_RESTRICT #define PETSC_C_RESTRICT __restrict__ #endif #ifndef PETSC_CXX_RESTRICT #define PETSC_CXX_RESTRICT __restrict__ #endif #ifndef PETSC_CXX_STATIC_INLINE #define PETSC_CXX_STATIC_INLINE static inline #endif #ifndef PETSC_HAVE_LIBDL #define PETSC_HAVE_LIBDL 1 #endif #ifndef PETSC_HAVE_LIBGFORTRAN #define PETSC_HAVE_LIBGFORTRAN 1 #endif #ifndef PETSC_HAVE_LIBPTHREAD #define PETSC_HAVE_LIBPTHREAD 1 #endif #ifndef PETSC_HAVE_LIBM #define PETSC_HAVE_LIBM 1 #endif #ifndef PETSC_HAVE_LIBMPICHF90 #define PETSC_HAVE_LIBMPICHF90 1 #endif #ifndef PETSC_HAVE_LIBFLAPACK #define PETSC_HAVE_LIBFLAPACK 1 #endif #ifndef PETSC_HAVE_ERF #define PETSC_HAVE_ERF 1 #endif #ifndef PETSC_HAVE_LIBFBLAS #define PETSC_HAVE_LIBFBLAS 1 #endif #ifndef PETSC_HAVE_LIBQUADMATH #define PETSC_HAVE_LIBQUADMATH 1 #endif #ifndef PETSC_HAVE_TGAMMA #define PETSC_HAVE_TGAMMA 1 #endif #ifndef PETSC_ARCH #define PETSC_ARCH "linux-gnu-cxx-opt" #endif #ifndef PETSC_DIR #define PETSC_DIR "/home/hills/seska/packages/petsc" #endif #ifndef HAVE_GZIP #define HAVE_GZIP 1 #endif #ifndef PETSC_CLANGUAGE_C #define PETSC_CLANGUAGE_C 1 #endif #ifndef PETSC_USE_ERRORCHECKING #define PETSC_USE_ERRORCHECKING 1 #endif #ifndef PETSC_MISSING_DREAL #define PETSC_MISSING_DREAL 1 #endif #ifndef PETSC_SIZEOF_MPI_COMM #define PETSC_SIZEOF_MPI_COMM 8 #endif #ifndef PETSC_BITS_PER_BYTE #define PETSC_BITS_PER_BYTE 8 #endif #ifndef PETSC_SIZEOF_MPI_FINT #define PETSC_SIZEOF_MPI_FINT 4 #endif #ifndef PETSC_SIZEOF_VOID_P #define PETSC_SIZEOF_VOID_P 8 #endif #ifndef PETSC_RETSIGTYPE #define PETSC_RETSIGTYPE void #endif #ifndef PETSC_HAVE_CXX_COMPLEX #define PETSC_HAVE_CXX_COMPLEX 1 #endif #ifndef PETSC_SIZEOF_LONG #define PETSC_SIZEOF_LONG 8 #endif #ifndef PETSC_USE_FORTRANKIND #define PETSC_USE_FORTRANKIND 1 #endif #ifndef PETSC_SIZEOF_SIZE_T #define PETSC_SIZEOF_SIZE_T 8 #endif #ifndef PETSC_HAVE_SIGINFO_T #define PETSC_HAVE_SIGINFO_T 1 #endif #ifndef PETSC_SIZEOF_CHAR #define PETSC_SIZEOF_CHAR 1 #endif #ifndef PETSC_SIZEOF_DOUBLE #define PETSC_SIZEOF_DOUBLE 8 #endif #ifndef PETSC_SIZEOF_FLOAT #define PETSC_SIZEOF_FLOAT 4 #endif #ifndef PETSC_HAVE_C99_COMPLEX #define PETSC_HAVE_C99_COMPLEX 1 #endif #ifndef PETSC_SIZEOF_INT #define PETSC_SIZEOF_INT 4 #endif #ifndef PETSC_SIZEOF_LONG_LONG #define PETSC_SIZEOF_LONG_LONG 8 #endif #ifndef PETSC_SIZEOF_SHORT #define PETSC_SIZEOF_SHORT 2 #endif #ifndef PETSC_HAVE_STRCASECMP #define PETSC_HAVE_STRCASECMP 1 #endif #ifndef PETSC_HAVE_GET_NPROCS #define PETSC_HAVE_GET_NPROCS 1 #endif #ifndef PETSC_HAVE_POPEN #define PETSC_HAVE_POPEN 1 #endif #ifndef PETSC_HAVE_SIGSET #define PETSC_HAVE_SIGSET 1 #endif #ifndef PETSC_HAVE_GETWD #define PETSC_HAVE_GETWD 1 #endif #ifndef PETSC_HAVE_VSNPRINTF #define PETSC_HAVE_VSNPRINTF 1 #endif #ifndef PETSC_HAVE_TIMES #define PETSC_HAVE_TIMES 1 #endif #ifndef PETSC_HAVE_DLSYM #define PETSC_HAVE_DLSYM 1 #endif #ifndef PETSC_HAVE_SNPRINTF #define PETSC_HAVE_SNPRINTF 1 #endif #ifndef PETSC_HAVE_GETPWUID #define PETSC_HAVE_GETPWUID 1 #endif #ifndef PETSC_HAVE_GETHOSTBYNAME #define PETSC_HAVE_GETHOSTBYNAME 1 #endif #ifndef PETSC_HAVE_GETCWD #define PETSC_HAVE_GETCWD 1 #endif #ifndef PETSC_HAVE_DLERROR #define PETSC_HAVE_DLERROR 1 #endif #ifndef PETSC_HAVE_FORK #define PETSC_HAVE_FORK 1 #endif #ifndef PETSC_HAVE_RAND #define PETSC_HAVE_RAND 1 #endif #ifndef PETSC_HAVE_GETTIMEOFDAY #define PETSC_HAVE_GETTIMEOFDAY 1 #endif #ifndef PETSC_HAVE_DLCLOSE #define PETSC_HAVE_DLCLOSE 1 #endif #ifndef PETSC_HAVE_UNAME #define PETSC_HAVE_UNAME 1 #endif #ifndef PETSC_HAVE_GETHOSTNAME #define PETSC_HAVE_GETHOSTNAME 1 #endif #ifndef PETSC_HAVE_MKSTEMP #define PETSC_HAVE_MKSTEMP 1 #endif #ifndef PETSC_HAVE_SIGACTION #define PETSC_HAVE_SIGACTION 1 #endif #ifndef PETSC_HAVE_DRAND48 #define PETSC_HAVE_DRAND48 1 #endif #ifndef PETSC_HAVE_MEMALIGN #define PETSC_HAVE_MEMALIGN 1 #endif #ifndef PETSC_HAVE_VA_COPY #define PETSC_HAVE_VA_COPY 1 #endif #ifndef PETSC_HAVE_CLOCK #define PETSC_HAVE_CLOCK 1 #endif #ifndef PETSC_HAVE_ACCESS #define PETSC_HAVE_ACCESS 1 #endif #ifndef PETSC_HAVE_SIGNAL #define PETSC_HAVE_SIGNAL 1 #endif #ifndef PETSC_HAVE_USLEEP #define PETSC_HAVE_USLEEP 1 #endif #ifndef PETSC_HAVE_GETRUSAGE #define PETSC_HAVE_GETRUSAGE 1 #endif #ifndef PETSC_HAVE_VFPRINTF #define PETSC_HAVE_VFPRINTF 1 #endif #ifndef PETSC_HAVE_NANOSLEEP #define PETSC_HAVE_NANOSLEEP 1 #endif #ifndef PETSC_HAVE_GETDOMAINNAME #define PETSC_HAVE_GETDOMAINNAME 1 #endif #ifndef PETSC_HAVE_TIME #define PETSC_HAVE_TIME 1 #endif #ifndef PETSC_HAVE_LSEEK #define PETSC_HAVE_LSEEK 1 #endif #ifndef PETSC_HAVE_SOCKET #define PETSC_HAVE_SOCKET 1 #endif #ifndef PETSC_HAVE_SYSINFO #define PETSC_HAVE_SYSINFO 1 #endif #ifndef PETSC_HAVE_READLINK #define PETSC_HAVE_READLINK 1 #endif #ifndef PETSC_HAVE_REALPATH #define PETSC_HAVE_REALPATH 1 #endif #ifndef PETSC_HAVE_DLOPEN #define PETSC_HAVE_DLOPEN 1 #endif #ifndef PETSC_HAVE_MEMMOVE #define PETSC_HAVE_MEMMOVE 1 #endif #ifndef PETSC_HAVE__GFORTRAN_IARGC #define PETSC_HAVE__GFORTRAN_IARGC 1 #endif #ifndef PETSC_HAVE_GETPAGESIZE #define PETSC_HAVE_GETPAGESIZE 1 #endif #ifndef PETSC_HAVE_SLEEP #define PETSC_HAVE_SLEEP 1 #endif #ifndef PETSC_HAVE_VPRINTF #define PETSC_HAVE_VPRINTF 1 #endif #ifndef PETSC_HAVE_BZERO #define PETSC_HAVE_BZERO 1 #endif #ifndef PETSC_SIGNAL_CAST #define PETSC_SIGNAL_CAST #endif #ifndef PETSC_WRITE_MEMORY_BARRIER #define PETSC_WRITE_MEMORY_BARRIER() asm volatile("sfence":::"memory") #endif #ifndef PETSC_MEMORY_BARRIER #define PETSC_MEMORY_BARRIER() asm volatile("mfence":::"memory") #endif #ifndef PETSC_READ_MEMORY_BARRIER #define PETSC_READ_MEMORY_BARRIER() asm volatile("lfence":::"memory") #endif #ifndef PETSC_CPU_RELAX #define PETSC_CPU_RELAX() asm volatile("rep; nop" ::: "memory") #endif #ifndef PETSC_BLASLAPACK_UNDERSCORE #define PETSC_BLASLAPACK_UNDERSCORE 1 #endif #ifndef PETSC_HAVE_MPI_COMM_C2F #define PETSC_HAVE_MPI_COMM_C2F 1 #endif #ifndef PETSC_HAVE_MPI_EXSCAN #define PETSC_HAVE_MPI_EXSCAN 1 #endif #ifndef PETSC_HAVE_MPI_COMM_F2C #define PETSC_HAVE_MPI_COMM_F2C 1 #endif #ifndef PETSC_HAVE_MPI_FINT #define PETSC_HAVE_MPI_FINT 1 #endif #ifndef PETSC_HAVE_MPI_F90MODULE #define PETSC_HAVE_MPI_F90MODULE 1 #endif #ifndef PETSC_HAVE_MPI_TYPE_GET_ENVELOPE #define PETSC_HAVE_MPI_TYPE_GET_ENVELOPE 1 #endif #ifndef PETSC_HAVE_MPI_IBARRIER #define PETSC_HAVE_MPI_IBARRIER 1 #endif #ifndef PETSC_HAVE_MPI_FINALIZED #define PETSC_HAVE_MPI_FINALIZED 1 #endif #ifndef PETSC_HAVE_MPI_COMM_SPAWN #define PETSC_HAVE_MPI_COMM_SPAWN 1 #endif #ifndef PETSC_HAVE_MPI_IALLREDUCE #define PETSC_HAVE_MPI_IALLREDUCE 1 #endif #ifndef PETSC_HAVE_MPI_TYPE_GET_EXTENT #define PETSC_HAVE_MPI_TYPE_GET_EXTENT 1 #endif #ifndef PETSC_HAVE_MPICH_CH3_SOCK #define PETSC_HAVE_MPICH_CH3_SOCK 1 #endif #ifndef PETSC_HAVE_MPI_COMBINER_DUP #define PETSC_HAVE_MPI_COMBINER_DUP 1 #endif #ifndef PETSC_HAVE_MPI_WIN_CREATE #define PETSC_HAVE_MPI_WIN_CREATE 1 #endif #ifndef PETSC_HAVE_MPI_REPLACE #define PETSC_HAVE_MPI_REPLACE 1 #endif #ifndef PETSC_HAVE_MPI_TYPE_DUP #define PETSC_HAVE_MPI_TYPE_DUP 1 #endif #ifndef PETSC_HAVE_MPIIO #define PETSC_HAVE_MPIIO 1 #endif #ifndef PETSC_HAVE_MPI_INIT_THREAD #define PETSC_HAVE_MPI_INIT_THREAD 1 #endif #ifndef PETSC_HAVE_MPI_ALLTOALLW #define PETSC_HAVE_MPI_ALLTOALLW 1 #endif #ifndef PETSC_HAVE_MPI_IN_PLACE #define PETSC_HAVE_MPI_IN_PLACE 1 #endif #ifndef PETSC_HAVE_MPICH_CH3_SOCK_FIXED_NBC_PROGRESS #define PETSC_HAVE_MPICH_CH3_SOCK_FIXED_NBC_PROGRESS 1 #endif #ifndef PETSC_HAVE_DYNAMIC_LIBRARIES #define PETSC_HAVE_DYNAMIC_LIBRARIES 1 #endif #ifndef PETSC_HAVE_SHARED_LIBRARIES #define PETSC_HAVE_SHARED_LIBRARIES 1 #endif #ifndef PETSC_USE_SHARED_LIBRARIES #define PETSC_USE_SHARED_LIBRARIES 1 #endif #ifndef PETSC_USE_GDB_DEBUGGER #define PETSC_USE_GDB_DEBUGGER 1 #endif #ifndef PETSC_USE_SCALAR_REAL #define PETSC_USE_SCALAR_REAL 1 #endif #ifndef PETSC_HAVE_ISINF #define PETSC_HAVE_ISINF 1 #endif #ifndef PETSC_HAVE_ISNAN #define PETSC_HAVE_ISNAN 1 #endif #ifndef PETSC_USE_REAL_DOUBLE #define PETSC_USE_REAL_DOUBLE 1 #endif #ifndef PETSC_USE_INFO #define PETSC_USE_INFO 1 #endif #ifndef PETSC_Alignx #define PETSC_Alignx(a,b) #endif #ifndef PETSC_USE_BACKWARD_LOOP #define PETSC_USE_BACKWARD_LOOP 1 #endif #ifndef PETSC_USE_DEBUG #define PETSC_USE_DEBUG 1 #endif #ifndef PETSC_USE_LOG #define PETSC_USE_LOG 1 #endif #ifndef PETSC_IS_COLOR_VALUE_TYPE #define PETSC_IS_COLOR_VALUE_TYPE short #endif #ifndef PETSC_USE_CTABLE #define PETSC_USE_CTABLE 1 #endif #ifndef PETSC_USE_PROC_FOR_SIZE #define PETSC_USE_PROC_FOR_SIZE 1 #endif #ifndef PETSC_HAVE_FORTRAN_GET_COMMAND_ARGUMENT #define PETSC_HAVE_FORTRAN_GET_COMMAND_ARGUMENT 1 #endif #ifndef PETSC_HAVE_GFORTRAN_IARGC #define PETSC_HAVE_GFORTRAN_IARGC 1 #endif #ifndef PETSC_MEMALIGN #define PETSC_MEMALIGN 16 #endif #ifndef PETSC_LEVEL1_DCACHE_LINESIZE #define PETSC_LEVEL1_DCACHE_LINESIZE 64 #endif #ifndef PETSC_LEVEL1_DCACHE_SIZE #define PETSC_LEVEL1_DCACHE_SIZE 32768 #endif #ifndef PETSC_LEVEL1_DCACHE_ASSOC #define PETSC_LEVEL1_DCACHE_ASSOC 8 #endif #ifndef PETSC_HAVE_SCHED_CPU_SET_T #define PETSC_HAVE_SCHED_CPU_SET_T 1 #endif #ifndef PETSC_HAVE_PTHREAD_BARRIER_T #define PETSC_HAVE_PTHREAD_BARRIER_T 1 #endif #ifndef PETSC_HAVE_SYS_SYSCTL_H #define PETSC_HAVE_SYS_SYSCTL_H 1 #endif #endif **** linux-gnu-cxx-opt/include/petscfix.h **** #if !defined(INCLUDED_UNKNOWN) #define INCLUDED_UNKNOWN #if defined(__cplusplus) extern "C" { } #else #endif #endif Configure Actions These are the actions performed by configure on the filesystem ----------------------------------------------------------------- PETSc: Build : Set default architecture to linux-gnu-cxx-opt in conf/petscvariables File creation : Created linux-gnu-cxx-opt/conf/reconfigure-linux-gnu-cxx-opt.py for automatic reconfiguration Framework: File creation : Created makefile configure header linux-gnu-cxx-opt/conf/petscvariables File creation : Created makefile configure header linux-gnu-cxx-opt/conf/petscvariables File creation : Created configure header linux-gnu-cxx-opt/include/petscconf.h File creation : Created C specific configure header linux-gnu-cxx-opt/include/petscfix.h Pushing language C Popping language C Pushing language Cxx Popping language Cxx Pushing language FC Popping language FC Compilers: C Compiler: tau_cc.sh -fPIC -g C++ Compiler: mpicxx -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -g -fPIC Fortran Compiler: mpif90 -fPIC -Wall -Wno-unused-variable -Wno-unused-dummy-argument -g Linkers: Shared linker: tau_cc.sh -shared -fPIC -g Dynamic linker: tau_cc.sh -shared -fPIC -g BLAS/LAPACK: -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lflapack -Wl,-rpath,/home/hills/seska/packages/fblaslapack -L/home/hills/seska/packages/fblaslapack -lfblas MPI: Includes: -I/home/hills/seska/packages/tau/include -I/home/hills/seska/packages/openmpi/include -I/home/hills/seska/packages/openmpi/include/openmpi -I/home/hills/seska/packages/openmpi/include/openmpi/ompi -I/home/hills/seska/packages/openmpi/lib -I/home/hills/seska/packages/petsc/linux-gnu-cxx-opt/include pthread: Library: -lpthread cmake: Arch: PETSc: PETSC_ARCH: linux-gnu-cxx-opt PETSC_DIR: /home/hills/seska/packages/petsc Clanguage: C shared libraries: enabled dynamic loading: disabled Scalar type: real Precision: double Memory alignment: 16 xxx=========================================================================xxx Configure stage complete. Now build PETSc libraries with (cmake build): make PETSC_DIR=/home/hills/seska/packages/petsc PETSC_ARCH=linux-gnu-cxx-opt all or (experimental with python): PETSC_DIR=/home/hills/seska/packages/petsc PETSC_ARCH=linux-gnu-cxx-opt ./config/builder.py xxx=========================================================================xxx