Pushing language C Popping language C Pushing language CUDA Popping language CUDA Pushing language Cxx Popping language Cxx Pushing language FC Popping language FC ================================================================================ ================================================================================ Starting Configure Run at Thu Mar 20 18:05:38 2014 Configure Options: --configModules=PETSc.Configure --optionsModule=PETSc.compilerOptions --COPTFLAGS="-O3 -ffast-math -funroll-loops" --CXXOPTFLAGS="-O3 -ffast-math -funroll-loops" --FOPTFLAGS="-O3 -ffast-math -funroll-loops" --download-parmetis --download-metis --download-hypre --with-cc=cc --with-clib-autodetect=0 --with-cxx=CC --with-cxxlib-autodetect=0 --with-debugging=0 --with-fc=ftn --with-fortranlib-autodetect=0 --with-shared-libraries=0 --download-mpich --with-x=0 --with-64-bit-indices PETSC_ARCH=arch-xe6-opt64 PETSC_DIR=/global/homes/m/madams/petsc_maint/ Working directory: /global/u2/m/madams/petsc_maint Machine platform: ('Linux', 'hopper09', '2.6.32.59-0.7-default', '#1 SMP 2012-07-13 15:50:56 +0200', 'x86_64', 'x86_64') Python version: 2.6.8 (unknown, Jul 16 2013, 14:48:55) [GCC 4.3.4 [gcc-4_3-branch revision 152973]] ================================================================================ Pushing language C Popping language C Pushing language CUDA Popping language CUDA Pushing language Cxx Popping language Cxx Pushing language FC Popping language FC ================================================================================ TEST configureExternalPackagesDir from config.framework(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/framework.py:821) TESTING: configureExternalPackagesDir from config.framework(config/BuildSystem/config/framework.py:821) ================================================================================ TEST configureDebuggers from PETSc.utilities.debuggers(/global/u2/m/madams/petsc_maint/config/PETSc/utilities/debuggers.py:22) TESTING: configureDebuggers from PETSc.utilities.debuggers(config/PETSc/utilities/debuggers.py:22) Find a default debugger and determine its arguments Checking for program /usr/common/usg/darshan/2.2.6/bin/gdb...not found Checking for program /scratch/altd/1.0/bin/gdb...not found Checking for program /usr/common/usg/bin/gdb...not found Checking for program /usr/common/mss/bin/gdb...not found Checking for program /usr/common/nsg/bin/gdb...not found Checking for program /global/common/carver/usg/matlab/R2012a/bin/gdb...not found Checking for program /opt/cray/netcdf/4.3.0/bin/gdb...not found Checking for program /opt/cray/hdf5/1.8.11/bin/gdb...not found Checking for program /usr/common/usg/allineatools/4.2-34404/bin/gdb...not found Checking for program /usr/common/usg/ipm/2.00/bin/gdb...not found Checking for program /opt/cray/papi/5.1.2/perf_events/no-cuda/bin/gdb...not found Checking for program /usr/common/graphics/visit/bin/gdb...not found Checking for program /usr/common/usg/cmake/2.8.10.1/bin/gdb...not found Checking for program /opt/cray/atp/1.7.0/bin/gdb...not found Checking for program /opt/cray/switch/1.0-1.0402.45840.2.63.gem/bin/gdb...not found Checking for program /opt/cray/shared-root/1.0-1.0402.46893.3.17.gem/bin/gdb...not found Checking for program /opt/cray/pdsh/2.26-1.0402.45278.1.1.gem/bin/gdb...not found Checking for program /opt/cray/nodehealth/5.1-1.0402.45895.3.76.gem/bin/gdb...not found Checking for program /opt/cray/lbcd/2.1-1.0402.45245.1.2.gem/bin/gdb...not found Checking for program /opt/cray/hosts/1.0-1.0402.45251.1.86.gem/bin/gdb...not found Checking for program /opt/cray/configuration/1.0-1.0402.45284.1.2.gem/bin/gdb...not found Checking for program /opt/cray/ccm/default/sbin/gdb...not found Checking for program /opt/cray/ccm/default/bin/gdb...not found Checking for program /opt/cray/audit/1.0.0-1.0402.45273.1.86.gem/bin/gdb...not found Checking for program /opt/cray/rca/1.0.0-2.0402.47290.7.1.gem/bin/gdb...not found Checking for program /opt/cray/csa/3.0.0-1_2.0402.45268.1.90.gem/sbin/gdb...not found Checking for program /opt/cray/csa/3.0.0-1_2.0402.45268.1.90.gem/bin/gdb...not found Checking for program /opt/cray/job/1.5.5-0.1_2.0402.45272.1.5.gem/bin/gdb...not found Checking for program /opt/cray/xpmem/0.1-2.0402.45248.1.5.gem/bin/gdb...not found Checking for program /opt/cray/dmapp/4.0.1-1.0402.7784.4.1.gem/bin/gdb...not found Checking for program /opt/cray/pmi/4.0.1-1.0000.9753.86.3.gem/bin/gdb...not found Checking for program /opt/cray/ugni/5.0-1.0402.7551.1.10.gem/bin/gdb...not found Checking for program /opt/cray/udreg/2.3.2-1.0402.7546.1.5.gem/bin/gdb...not found Checking for program /opt/gcc/4.8.1/bin/gdb...not found Checking for program /opt/cray/xt-asyncpe/5.23/bin/gdb...not found Checking for program /usr/common/usg/valgrind/3.8.1/bin/gdb...not found Checking for program /global/homes/m/madams/git-fat/gdb...not found Checking for program /opt/moab/7.2.3_notcpretry/bin/gdb...not found Checking for program /opt/moab/7.2.3_notcpretry/sbin/gdb...not found Checking for program /opt/torque/4.2.3.h5_notcpretry/sbin/gdb...not found Checking for program /opt/torque/4.2.3.h5_notcpretry/bin/gdb...not found Checking for program /opt/cray/eslogin/eswrap/1.0.20-1.010102.662.0/bin/gdb...not found Checking for program /opt/modules/3.2.6.7/bin/gdb...not found Checking for program /usr/syscom/nsg/sbin/gdb...not found Checking for program /usr/syscom/nsg/bin/gdb...not found Checking for program /opt/modules/3.2.6.6/bin/gdb...not found Checking for program /usr/lpp/mmfs/bin/gdb...not found Checking for program /usr/local/bin/gdb...not found Checking for program /usr/bin/gdb...found Defined make macro "GDB" to "/usr/bin/gdb" Checking for program /usr/common/usg/darshan/2.2.6/bin/dbx...not found Checking for program /scratch/altd/1.0/bin/dbx...not found Checking for program /usr/common/usg/bin/dbx...not found Checking for program /usr/common/mss/bin/dbx...not found Checking for program /usr/common/nsg/bin/dbx...not found Checking for program /global/common/carver/usg/matlab/R2012a/bin/dbx...not found Checking for program /opt/cray/netcdf/4.3.0/bin/dbx...not found Checking for program /opt/cray/hdf5/1.8.11/bin/dbx...not found Checking for program /usr/common/usg/allineatools/4.2-34404/bin/dbx...not found Checking for program /usr/common/usg/ipm/2.00/bin/dbx...not found Checking for program /opt/cray/papi/5.1.2/perf_events/no-cuda/bin/dbx...not found Checking for program /usr/common/graphics/visit/bin/dbx...not found Checking for program /usr/common/usg/cmake/2.8.10.1/bin/dbx...not found Checking for program /opt/cray/atp/1.7.0/bin/dbx...not found Checking for program /opt/cray/switch/1.0-1.0402.45840.2.63.gem/bin/dbx...not found Checking for program /opt/cray/shared-root/1.0-1.0402.46893.3.17.gem/bin/dbx...not found Checking for program /opt/cray/pdsh/2.26-1.0402.45278.1.1.gem/bin/dbx...not found Checking for program /opt/cray/nodehealth/5.1-1.0402.45895.3.76.gem/bin/dbx...not found Checking for program /opt/cray/lbcd/2.1-1.0402.45245.1.2.gem/bin/dbx...not found Checking for program /opt/cray/hosts/1.0-1.0402.45251.1.86.gem/bin/dbx...not found Checking for program /opt/cray/configuration/1.0-1.0402.45284.1.2.gem/bin/dbx...not found Checking for program /opt/cray/ccm/default/sbin/dbx...not found Checking for program /opt/cray/ccm/default/bin/dbx...not found Checking for program /opt/cray/audit/1.0.0-1.0402.45273.1.86.gem/bin/dbx...not found Checking for program /opt/cray/rca/1.0.0-2.0402.47290.7.1.gem/bin/dbx...not found Checking for program /opt/cray/csa/3.0.0-1_2.0402.45268.1.90.gem/sbin/dbx...not found Checking for program /opt/cray/csa/3.0.0-1_2.0402.45268.1.90.gem/bin/dbx...not found Checking for program /opt/cray/job/1.5.5-0.1_2.0402.45272.1.5.gem/bin/dbx...not found Checking for program /opt/cray/xpmem/0.1-2.0402.45248.1.5.gem/bin/dbx...not found Checking for program /opt/cray/dmapp/4.0.1-1.0402.7784.4.1.gem/bin/dbx...not found Checking for program /opt/cray/pmi/4.0.1-1.0000.9753.86.3.gem/bin/dbx...not found Checking for program /opt/cray/ugni/5.0-1.0402.7551.1.10.gem/bin/dbx...not found Checking for program /opt/cray/udreg/2.3.2-1.0402.7546.1.5.gem/bin/dbx...not found Checking for program /opt/gcc/4.8.1/bin/dbx...not found Checking for program /opt/cray/xt-asyncpe/5.23/bin/dbx...not found Checking for program /usr/common/usg/valgrind/3.8.1/bin/dbx...not found Checking for program /global/homes/m/madams/git-fat/dbx...not found Checking for program /opt/moab/7.2.3_notcpretry/bin/dbx...not found Checking for program /opt/moab/7.2.3_notcpretry/sbin/dbx...not found Checking for program /opt/torque/4.2.3.h5_notcpretry/sbin/dbx...not found Checking for program /opt/torque/4.2.3.h5_notcpretry/bin/dbx...not found Checking for program /opt/cray/eslogin/eswrap/1.0.20-1.010102.662.0/bin/dbx...not found Checking for program /opt/modules/3.2.6.7/bin/dbx...not found Checking for program /usr/syscom/nsg/sbin/dbx...not found Checking for program /usr/syscom/nsg/bin/dbx...not found Checking for program /opt/modules/3.2.6.6/bin/dbx...not found Checking for program /usr/lpp/mmfs/bin/dbx...not found Checking for program /usr/local/bin/dbx...not found Checking for program /usr/bin/dbx...not found Checking for program /bin/dbx...not found Checking for program /usr/bin/X11/dbx...not found Checking for program /usr/X11R6/bin/dbx...not found Checking for program /usr/games/dbx...not found Checking for program /usr/lib64/jvm/jre/bin/dbx...not found Checking for program /usr/lib/mit/bin/dbx...not found Checking for program /usr/lib/mit/sbin/dbx...not found Checking for program /usr/lib/qt3/bin/dbx...not found Checking for program /opt/cray/bin/dbx...not found Checking for program /global/homes/m/madams/dbx...not found Checking for program /usr/common/usg/darshan/2.2.6/bin/xdb...not found Checking for program /scratch/altd/1.0/bin/xdb...not found Checking for program /usr/common/usg/bin/xdb...not found Checking for program /usr/common/mss/bin/xdb...not found Checking for program /usr/common/nsg/bin/xdb...not found Checking for program /global/common/carver/usg/matlab/R2012a/bin/xdb...not found Checking for program /opt/cray/netcdf/4.3.0/bin/xdb...not found Checking for program /opt/cray/hdf5/1.8.11/bin/xdb...not found Checking for program /usr/common/usg/allineatools/4.2-34404/bin/xdb...not found Checking for program /usr/common/usg/ipm/2.00/bin/xdb...not found Checking for program /opt/cray/papi/5.1.2/perf_events/no-cuda/bin/xdb...not found Checking for program /usr/common/graphics/visit/bin/xdb...not found Checking for program /usr/common/usg/cmake/2.8.10.1/bin/xdb...not found Checking for program /opt/cray/atp/1.7.0/bin/xdb...not found Checking for program /opt/cray/switch/1.0-1.0402.45840.2.63.gem/bin/xdb...not found Checking for program /opt/cray/shared-root/1.0-1.0402.46893.3.17.gem/bin/xdb...not found Checking for program /opt/cray/pdsh/2.26-1.0402.45278.1.1.gem/bin/xdb...not found Checking for program /opt/cray/nodehealth/5.1-1.0402.45895.3.76.gem/bin/xdb...not found Checking for program /opt/cray/lbcd/2.1-1.0402.45245.1.2.gem/bin/xdb...not found Checking for program /opt/cray/hosts/1.0-1.0402.45251.1.86.gem/bin/xdb...not found Checking for program /opt/cray/configuration/1.0-1.0402.45284.1.2.gem/bin/xdb...not found Checking for program /opt/cray/ccm/default/sbin/xdb...not found Checking for program /opt/cray/ccm/default/bin/xdb...not found Checking for program /opt/cray/audit/1.0.0-1.0402.45273.1.86.gem/bin/xdb...not found Checking for program /opt/cray/rca/1.0.0-2.0402.47290.7.1.gem/bin/xdb...not found Checking for program /opt/cray/csa/3.0.0-1_2.0402.45268.1.90.gem/sbin/xdb...not found Checking for program /opt/cray/csa/3.0.0-1_2.0402.45268.1.90.gem/bin/xdb...not found Checking for program /opt/cray/job/1.5.5-0.1_2.0402.45272.1.5.gem/bin/xdb...not found Checking for program /opt/cray/xpmem/0.1-2.0402.45248.1.5.gem/bin/xdb...not found Checking for program /opt/cray/dmapp/4.0.1-1.0402.7784.4.1.gem/bin/xdb...not found Checking for program /opt/cray/pmi/4.0.1-1.0000.9753.86.3.gem/bin/xdb...not found Checking for program /opt/cray/ugni/5.0-1.0402.7551.1.10.gem/bin/xdb...not found Checking for program /opt/cray/udreg/2.3.2-1.0402.7546.1.5.gem/bin/xdb...not found Checking for program /opt/gcc/4.8.1/bin/xdb...not found Checking for program /opt/cray/xt-asyncpe/5.23/bin/xdb...not found Checking for program /usr/common/usg/valgrind/3.8.1/bin/xdb...not found Checking for program /global/homes/m/madams/git-fat/xdb...not found Checking for program /opt/moab/7.2.3_notcpretry/bin/xdb...not found Checking for program /opt/moab/7.2.3_notcpretry/sbin/xdb...not found Checking for program /opt/torque/4.2.3.h5_notcpretry/sbin/xdb...not found Checking for program /opt/torque/4.2.3.h5_notcpretry/bin/xdb...not found Checking for program /opt/cray/eslogin/eswrap/1.0.20-1.010102.662.0/bin/xdb...not found Checking for program /opt/modules/3.2.6.7/bin/xdb...not found Checking for program /usr/syscom/nsg/sbin/xdb...not found Checking for program /usr/syscom/nsg/bin/xdb...not found Checking for program /opt/modules/3.2.6.6/bin/xdb...not found Checking for program /usr/lpp/mmfs/bin/xdb...not found Checking for program /usr/local/bin/xdb...not found Checking for program /usr/bin/xdb...not found Checking for program /bin/xdb...not found Checking for program /usr/bin/X11/xdb...not found Checking for program /usr/X11R6/bin/xdb...not found Checking for program /usr/games/xdb...not found Checking for program /usr/lib64/jvm/jre/bin/xdb...not found Checking for program /usr/lib/mit/bin/xdb...not found Checking for program /usr/lib/mit/sbin/xdb...not found Checking for program /usr/lib/qt3/bin/xdb...not found Checking for program /opt/cray/bin/xdb...not found Checking for program /global/homes/m/madams/xdb...not found Checking for program /usr/common/usg/darshan/2.2.6/bin/dsymutil...not found Checking for program /scratch/altd/1.0/bin/dsymutil...not found Checking for program /usr/common/usg/bin/dsymutil...not found Checking for program /usr/common/mss/bin/dsymutil...not found Checking for program /usr/common/nsg/bin/dsymutil...not found Checking for program /global/common/carver/usg/matlab/R2012a/bin/dsymutil...not found Checking for program /opt/cray/netcdf/4.3.0/bin/dsymutil...not found Checking for program /opt/cray/hdf5/1.8.11/bin/dsymutil...not found Checking for program /usr/common/usg/allineatools/4.2-34404/bin/dsymutil...not found Checking for program /usr/common/usg/ipm/2.00/bin/dsymutil...not found Checking for program /opt/cray/papi/5.1.2/perf_events/no-cuda/bin/dsymutil...not found Checking for program /usr/common/graphics/visit/bin/dsymutil...not found Checking for program /usr/common/usg/cmake/2.8.10.1/bin/dsymutil...not found Checking for program /opt/cray/atp/1.7.0/bin/dsymutil...not found Checking for program /opt/cray/switch/1.0-1.0402.45840.2.63.gem/bin/dsymutil...not found Checking for program /opt/cray/shared-root/1.0-1.0402.46893.3.17.gem/bin/dsymutil...not found Checking for program /opt/cray/pdsh/2.26-1.0402.45278.1.1.gem/bin/dsymutil...not found Checking for program /opt/cray/nodehealth/5.1-1.0402.45895.3.76.gem/bin/dsymutil...not found Checking for program /opt/cray/lbcd/2.1-1.0402.45245.1.2.gem/bin/dsymutil...not found Checking for program /opt/cray/hosts/1.0-1.0402.45251.1.86.gem/bin/dsymutil...not found Checking for program /opt/cray/configuration/1.0-1.0402.45284.1.2.gem/bin/dsymutil...not found Checking for program /opt/cray/ccm/default/sbin/dsymutil...not found Checking for program /opt/cray/ccm/default/bin/dsymutil...not found Checking for program /opt/cray/audit/1.0.0-1.0402.45273.1.86.gem/bin/dsymutil...not found Checking for program /opt/cray/rca/1.0.0-2.0402.47290.7.1.gem/bin/dsymutil...not found Checking for program /opt/cray/csa/3.0.0-1_2.0402.45268.1.90.gem/sbin/dsymutil...not found Checking for program /opt/cray/csa/3.0.0-1_2.0402.45268.1.90.gem/bin/dsymutil...not found Checking for program /opt/cray/job/1.5.5-0.1_2.0402.45272.1.5.gem/bin/dsymutil...not found Checking for program /opt/cray/xpmem/0.1-2.0402.45248.1.5.gem/bin/dsymutil...not found Checking for program /opt/cray/dmapp/4.0.1-1.0402.7784.4.1.gem/bin/dsymutil...not found Checking for program /opt/cray/pmi/4.0.1-1.0000.9753.86.3.gem/bin/dsymutil...not found Checking for program /opt/cray/ugni/5.0-1.0402.7551.1.10.gem/bin/dsymutil...not found Checking for program /opt/cray/udreg/2.3.2-1.0402.7546.1.5.gem/bin/dsymutil...not found Checking for program /opt/gcc/4.8.1/bin/dsymutil...not found Checking for program /opt/cray/xt-asyncpe/5.23/bin/dsymutil...not found Checking for program /usr/common/usg/valgrind/3.8.1/bin/dsymutil...not found Checking for program /global/homes/m/madams/git-fat/dsymutil...not found Checking for program /opt/moab/7.2.3_notcpretry/bin/dsymutil...not found Checking for program /opt/moab/7.2.3_notcpretry/sbin/dsymutil...not found Checking for program /opt/torque/4.2.3.h5_notcpretry/sbin/dsymutil...not found Checking for program /opt/torque/4.2.3.h5_notcpretry/bin/dsymutil...not found Checking for program /opt/cray/eslogin/eswrap/1.0.20-1.010102.662.0/bin/dsymutil...not found Checking for program /opt/modules/3.2.6.7/bin/dsymutil...not found Checking for program /usr/syscom/nsg/sbin/dsymutil...not found Checking for program /usr/syscom/nsg/bin/dsymutil...not found Checking for program /opt/modules/3.2.6.6/bin/dsymutil...not found Checking for program /usr/lpp/mmfs/bin/dsymutil...not found Checking for program /usr/local/bin/dsymutil...not found Checking for program /usr/bin/dsymutil...not found Checking for program /bin/dsymutil...not found Checking for program /usr/bin/X11/dsymutil...not found Checking for program /usr/X11R6/bin/dsymutil...not found Checking for program /usr/games/dsymutil...not found Checking for program /usr/lib64/jvm/jre/bin/dsymutil...not found Checking for program /usr/lib/mit/bin/dsymutil...not found Checking for program /usr/lib/mit/sbin/dsymutil...not found Checking for program /usr/lib/qt3/bin/dsymutil...not found Checking for program /opt/cray/bin/dsymutil...not found Checking for program /global/homes/m/madams/dsymutil...not found Defined make macro "DSYMUTIL" to "true" Defined "USE_GDB_DEBUGGER" to "1" ================================================================================ TEST configureCLanguage from PETSc.utilities.languages(/global/u2/m/madams/petsc_maint/config/PETSc/utilities/languages.py:28) TESTING: configureCLanguage from PETSc.utilities.languages(config/PETSc/utilities/languages.py:28) Choose whether to compile the PETSc library using a C or C++ compiler C language is C Defined "CLANGUAGE_C" to "1" ================================================================================ TEST configureFortranLanguage from PETSc.utilities.languages(/global/u2/m/madams/petsc_maint/config/PETSc/utilities/languages.py:37) TESTING: configureFortranLanguage from PETSc.utilities.languages(config/PETSc/utilities/languages.py:37) Turn on Fortran bindings Using Fortran ================================================================================ TEST configureMake from config.programs(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/programs.py:24) TESTING: configureMake from config.programs(config/BuildSystem/config/programs.py:24) Check various things about make Checking for program /usr/common/usg/darshan/2.2.6/bin/make...not found Checking for program /scratch/altd/1.0/bin/make...not found Checking for program /usr/common/usg/bin/make...not found Checking for program /usr/common/mss/bin/make...not found Checking for program /usr/common/nsg/bin/make...not found Checking for program /global/common/carver/usg/matlab/R2012a/bin/make...not found Checking for program /opt/cray/netcdf/4.3.0/bin/make...not found Checking for program /opt/cray/hdf5/1.8.11/bin/make...not found Checking for program /usr/common/usg/allineatools/4.2-34404/bin/make...not found Checking for program /usr/common/usg/ipm/2.00/bin/make...not found Checking for program /opt/cray/papi/5.1.2/perf_events/no-cuda/bin/make...not found Checking for program /usr/common/graphics/visit/bin/make...not found Checking for program /usr/common/usg/cmake/2.8.10.1/bin/make...not found Checking for program /opt/cray/atp/1.7.0/bin/make...not found Checking for program /opt/cray/switch/1.0-1.0402.45840.2.63.gem/bin/make...not found Checking for program /opt/cray/shared-root/1.0-1.0402.46893.3.17.gem/bin/make...not found Checking for program /opt/cray/pdsh/2.26-1.0402.45278.1.1.gem/bin/make...not found Checking for program /opt/cray/nodehealth/5.1-1.0402.45895.3.76.gem/bin/make...not found Checking for program /opt/cray/lbcd/2.1-1.0402.45245.1.2.gem/bin/make...not found Checking for program /opt/cray/hosts/1.0-1.0402.45251.1.86.gem/bin/make...not found Checking for program /opt/cray/configuration/1.0-1.0402.45284.1.2.gem/bin/make...not found Checking for program /opt/cray/ccm/default/sbin/make...not found Checking for program /opt/cray/ccm/default/bin/make...not found Checking for program /opt/cray/audit/1.0.0-1.0402.45273.1.86.gem/bin/make...not found Checking for program /opt/cray/rca/1.0.0-2.0402.47290.7.1.gem/bin/make...not found Checking for program /opt/cray/csa/3.0.0-1_2.0402.45268.1.90.gem/sbin/make...not found Checking for program /opt/cray/csa/3.0.0-1_2.0402.45268.1.90.gem/bin/make...not found Checking for program /opt/cray/job/1.5.5-0.1_2.0402.45272.1.5.gem/bin/make...not found Checking for program /opt/cray/xpmem/0.1-2.0402.45248.1.5.gem/bin/make...not found Checking for program /opt/cray/dmapp/4.0.1-1.0402.7784.4.1.gem/bin/make...not found Checking for program /opt/cray/pmi/4.0.1-1.0000.9753.86.3.gem/bin/make...not found Checking for program /opt/cray/ugni/5.0-1.0402.7551.1.10.gem/bin/make...not found Checking for program /opt/cray/udreg/2.3.2-1.0402.7546.1.5.gem/bin/make...not found Checking for program /opt/gcc/4.8.1/bin/make...not found Checking for program /opt/cray/xt-asyncpe/5.23/bin/make...not found Checking for program /usr/common/usg/valgrind/3.8.1/bin/make...not found Checking for program /global/homes/m/madams/git-fat/make...not found Checking for program /opt/moab/7.2.3_notcpretry/bin/make...not found Checking for program /opt/moab/7.2.3_notcpretry/sbin/make...not found Checking for program /opt/torque/4.2.3.h5_notcpretry/sbin/make...not found Checking for program /opt/torque/4.2.3.h5_notcpretry/bin/make...not found Checking for program /opt/cray/eslogin/eswrap/1.0.20-1.010102.662.0/bin/make...not found Checking for program /opt/modules/3.2.6.7/bin/make...not found Checking for program /usr/syscom/nsg/sbin/make...not found Checking for program /usr/syscom/nsg/bin/make...not found Checking for program /opt/modules/3.2.6.6/bin/make...not found Checking for program /usr/lpp/mmfs/bin/make...not found Checking for program /usr/local/bin/make...not found Checking for program /usr/bin/make...found Defined make macro "MAKE" to "/usr/bin/make" Checking for program /usr/common/usg/darshan/2.2.6/bin/strings...not found Checking for program /scratch/altd/1.0/bin/strings...not found Checking for program /usr/common/usg/bin/strings...not found Checking for program /usr/common/mss/bin/strings...not found Checking for program /usr/common/nsg/bin/strings...not found Checking for program /global/common/carver/usg/matlab/R2012a/bin/strings...not found Checking for program /opt/cray/netcdf/4.3.0/bin/strings...not found Checking for program /opt/cray/hdf5/1.8.11/bin/strings...not found Checking for program /usr/common/usg/allineatools/4.2-34404/bin/strings...not found Checking for program /usr/common/usg/ipm/2.00/bin/strings...not found Checking for program /opt/cray/papi/5.1.2/perf_events/no-cuda/bin/strings...not found Checking for program /usr/common/graphics/visit/bin/strings...not found Checking for program /usr/common/usg/cmake/2.8.10.1/bin/strings...not found Checking for program /opt/cray/atp/1.7.0/bin/strings...not found Checking for program /opt/cray/switch/1.0-1.0402.45840.2.63.gem/bin/strings...not found Checking for program /opt/cray/shared-root/1.0-1.0402.46893.3.17.gem/bin/strings...not found Checking for program /opt/cray/pdsh/2.26-1.0402.45278.1.1.gem/bin/strings...not found Checking for program /opt/cray/nodehealth/5.1-1.0402.45895.3.76.gem/bin/strings...not found Checking for program /opt/cray/lbcd/2.1-1.0402.45245.1.2.gem/bin/strings...not found Checking for program /opt/cray/hosts/1.0-1.0402.45251.1.86.gem/bin/strings...not found Checking for program /opt/cray/configuration/1.0-1.0402.45284.1.2.gem/bin/strings...not found Checking for program /opt/cray/ccm/default/sbin/strings...not found Checking for program /opt/cray/ccm/default/bin/strings...not found Checking for program /opt/cray/audit/1.0.0-1.0402.45273.1.86.gem/bin/strings...not found Checking for program /opt/cray/rca/1.0.0-2.0402.47290.7.1.gem/bin/strings...not found Checking for program /opt/cray/csa/3.0.0-1_2.0402.45268.1.90.gem/sbin/strings...not found Checking for program /opt/cray/csa/3.0.0-1_2.0402.45268.1.90.gem/bin/strings...not found Checking for program /opt/cray/job/1.5.5-0.1_2.0402.45272.1.5.gem/bin/strings...not found Checking for program /opt/cray/xpmem/0.1-2.0402.45248.1.5.gem/bin/strings...not found Checking for program /opt/cray/dmapp/4.0.1-1.0402.7784.4.1.gem/bin/strings...not found Checking for program /opt/cray/pmi/4.0.1-1.0000.9753.86.3.gem/bin/strings...not found Checking for program /opt/cray/ugni/5.0-1.0402.7551.1.10.gem/bin/strings...not found Checking for program /opt/cray/udreg/2.3.2-1.0402.7546.1.5.gem/bin/strings...not found Checking for program /opt/gcc/4.8.1/bin/strings...not found Checking for program /opt/cray/xt-asyncpe/5.23/bin/strings...not found Checking for program /usr/common/usg/valgrind/3.8.1/bin/strings...not found Checking for program /global/homes/m/madams/git-fat/strings...not found Checking for program /opt/moab/7.2.3_notcpretry/bin/strings...not found Checking for program /opt/moab/7.2.3_notcpretry/sbin/strings...not found Checking for program /opt/torque/4.2.3.h5_notcpretry/sbin/strings...not found Checking for program /opt/torque/4.2.3.h5_notcpretry/bin/strings...not found Checking for program /opt/cray/eslogin/eswrap/1.0.20-1.010102.662.0/bin/strings...not found Checking for program /opt/modules/3.2.6.7/bin/strings...not found Checking for program /usr/syscom/nsg/sbin/strings...not found Checking for program /usr/syscom/nsg/bin/strings...not found Checking for program /opt/modules/3.2.6.6/bin/strings...not found Checking for program /usr/lpp/mmfs/bin/strings...not found Checking for program /usr/local/bin/strings...not found Checking for program /usr/bin/strings...found Defined make macro "STRINGS" to "/usr/bin/strings" sh: /usr/bin/strings /usr/bin/make Executing: /usr/bin/strings /usr/bin/make sh: /lib64/ld-linux-x86-64.so.2 SuSESuSE librt.so.1 __gmon_start__ _Jv_RegisterClasses clock_gettime libc.so.6 fflush strcpy __rawmemchr __printf_chk fnmatch readdir _IO_putc setlocale fopen strsignal strncmp optind strrchr wait pipe __strdup dcgettext closedir sigprocmask __stack_chk_fail __lxstat unlink realloc abort stdin _exit getpid kill __assert_fail mkstemp strtod strtol feof getloadavg fgets getpwnam calloc strlen sigemptyset memset glob strstr __errno_location chdir dup2 __fprintf_chk sigaddset ctime putenv stdout fputs lseek memcpy fclose malloc remove __strncpy_chk opendir getenv __ctype_b_loc sscanf optarg stderr alarm getlogin readlink setrlimit getopt_long execvp __fxstat __realpath_chk getcwd fwrite fread gettimeofday sigaction waitpid localtime strchr vfork __vfprintf_chk fdopen qsort __strcpy_chk __ctype_tolower_loc setvbuf fcntl __sprintf_chk bsd_signal __xstat getrlimit memmove bindtextdomain opterr strcmp strerror __libc_start_main ferror globfree __environ __cxa_atexit GLIBC_2.2.5 GLIBC_2.4 GLIBC_2.3 GLIBC_2.3.4 5B^" %D^" %B^" %:^" %2^" %*^" %"^" %z]" %r]" %j]" %b]" %Z]" %R]" %J]" %B]" %:]" %2]" %*]" %"]" %z\" %r\" %j\" %b\" %Z\" %R\" %J\" %B\" %:\" %2\" %*\" %"\" %z[" %r[" %j[" %b[" %Z[" %R[" %J[" %B[" %:[" %2[" %*[" %"[" fff. ATSH t^F" -3F" []A\A] AVAUI ATUSH t$0I D$(I ->E" H[]A\A]A^A_ H[]A\A]A^ D$$I |$(H t$0H D$$f D$$H |$(f L;l$ t=H;-FC" L;%QB" D$hu ffffff. AVAUATUSH H9T$ []A\A]A^A_ =.C" l$ H AWAVAUATSH [A\A]A^A_ =Z;" ffff. L;%s;" []A\A] []A\A] []A\A] ffffff. StZH D$ H D$ H E(@t+ U(E1 E(u^H =[." \$(H l$0L d$8L l$@L t$HH |$PH %{8" fffff. ATSH %A-" D$ Hi L;d$ I \$(H l$0L d$8L l$@L t$HL |$PH H9D$ wPIc L9d$ 5L*" |$0H 5 )" D$81 \$0H \$8H t$@H |$ H |$PH D$8dH3 @[]A\ D$81 T$8dH3 \$@H l$HL d$PH ffff. %R!" l$ L t$(L |$0H l$ L t$(L |$0H AWAVI AUATUSH E@I;E@v []A\A]A^A_ fff. fffff. H;-Q <.u1 t% ARFILENAMES/ # commands to execute (built-in): (from `%s', line %lu): %.*s *** [%s] Deleting file `%s' *** Deleting file `%s' unlink: kill $(MAKE) ${MAKE} .SUFFIXES *** [%s] Archive member `%s' may be bogus; not deleted *** Archive member `%s' may be bogus; not deleted ARFLAGS CHECKOUT,v COFLAGS $(CC) -E $(FC) F77FLAGS $(FFLAGS) LINT lint YACC yacc MAKEINFO makeinfo TEXI2DVI texi2dvi CWEAVE cweave CTANGLE ctangle rm -f LINK.o COMPILE.c LINK.c COMPILE.cc COMPILE.C $(COMPILE.cc) COMPILE.cpp LINK.cc LINK.C $(LINK.cc) LINK.cpp YACC.y $(YACC) $(YFLAGS) LEX.l $(LEX) $(LFLAGS) -t COMPILE.f LINK.f COMPILE.F LINK.F COMPILE.r LINK.r COMPILE.def COMPILE.mod COMPILE.p LINK.p LINK.s COMPILE.s LINK.S COMPILE.S PREPROCESS.S $(CC) -E $(CPPFLAGS) PREPROCESS.F PREPROCESS.r LINT.c OUTPUT_OPTION -o $@ .LIBPATTERNS lib%.so lib%.a $(AR) $(ARFLAGS) $@ $< %.out @rm -f $@ cp $< $@ %.w %.ch $(CTANGLE) $^ $@ %.tex $(CWEAVE) $^ $@ $(CHECKOUT,v) RCS/%,v RCS/% SCCS/s.% $(COMPILE.mod) -o $@ -e $@ $^ .def.sym $(COMPILE.def) -o $@ $< cat $< >$@ chmod a+x $@ .s.o $(COMPILE.s) -o $@ $< .S.o $(COMPILE.S) -o $@ $< .c.o .cc.o .C.o .cpp.o .f.o .p.o .F.o .r.o .mod.o $(COMPILE.mod) -o $@ $< .c.ln $(LINT.c) -C$* $< .y.ln .l.ln .y.c .l.c @$(RM) $@ $(LEX.l) $< > $@ .F.f .r.f .l.r .S.s $(PREPROCESS.S) $< > $@ .texinfo.info .texi.info .txinfo.info .tex.dvi $(TEX) $< .texinfo.dvi .texi.dvi .txinfo.dvi .w.c $(CTANGLE) $< - $@ .web.p $(TANGLE) $< .w.tex $(CWEAVE) $< - $@ .web.tex $(WEAVE) $< +$(if $(wildcard $@),,$(CO) $(COFLAGS) $< $@) $(CC) $(LDFLAGS) $(TARGET_ARCH) $(CC) $(CFLAGS) $(CPPFLAGS) $(TARGET_ARCH) -c $(CC) $(CFLAGS) $(CPPFLAGS) $(LDFLAGS) $(TARGET_ARCH) $(CXX) $(CXXFLAGS) $(CPPFLAGS) $(TARGET_ARCH) -c $(CXX) $(CXXFLAGS) $(CPPFLAGS) $(LDFLAGS) $(TARGET_ARCH) $(FC) $(FFLAGS) $(TARGET_ARCH) -c $(FC) $(FFLAGS) $(LDFLAGS) $(TARGET_ARCH) $(FC) $(FFLAGS) $(CPPFLAGS) $(TARGET_ARCH) -c $(FC) $(FFLAGS) $(CPPFLAGS) $(LDFLAGS) $(TARGET_ARCH) $(FC) $(FFLAGS) $(RFLAGS) $(TARGET_ARCH) -c $(FC) $(FFLAGS) $(RFLAGS) $(LDFLAGS) $(TARGET_ARCH) $(M2C) $(M2FLAGS) $(DEFFLAGS) $(TARGET_ARCH) $(M2C) $(M2FLAGS) $(MODFLAGS) $(TARGET_ARCH) $(PC) $(PFLAGS) $(CPPFLAGS) $(TARGET_ARCH) -c $(PC) $(PFLAGS) $(CPPFLAGS) $(LDFLAGS) $(TARGET_ARCH) $(CC) $(ASFLAGS) $(LDFLAGS) $(TARGET_MACH) $(AS) $(ASFLAGS) $(TARGET_MACH) $(CC) $(ASFLAGS) $(CPPFLAGS) $(LDFLAGS) $(TARGET_MACH) $(CC) $(ASFLAGS) $(CPPFLAGS) $(TARGET_MACH) -c $(FC) $(FFLAGS) $(CPPFLAGS) $(TARGET_ARCH) -F $(FC) $(FFLAGS) $(RFLAGS) $(TARGET_ARCH) -F $(LINT) $(LINTFLAGS) $(CPPFLAGS) $(TARGET_ARCH) $(GET) $(GFLAGS) $(SCCS_OUTPUT_OPTION) $< $(LINK.o) $^ $(LOADLIBES) $(LDLIBS) -o $@ $(LINK.s) $^ $(LOADLIBES) $(LDLIBS) -o $@ $(LINK.S) $^ $(LOADLIBES) $(LDLIBS) -o $@ $(LINK.c) $^ $(LOADLIBES) $(LDLIBS) -o $@ $(LINK.cc) $^ $(LOADLIBES) $(LDLIBS) -o $@ $(LINK.C) $^ $(LOADLIBES) $(LDLIBS) -o $@ $(LINK.cpp) $^ $(LOADLIBES) $(LDLIBS) -o $@ $(LINK.f) $^ $(LOADLIBES) $(LDLIBS) -o $@ $(LINK.p) $^ $(LOADLIBES) $(LDLIBS) -o $@ $(LINK.F) $^ $(LOADLIBES) $(LDLIBS) -o $@ $(LINK.r) $^ $(LOADLIBES) $(LDLIBS) -o $@ $(COMPILE.c) $(OUTPUT_OPTION) $< $(COMPILE.cc) $(OUTPUT_OPTION) $< $(COMPILE.C) $(OUTPUT_OPTION) $< $(COMPILE.cpp) $(OUTPUT_OPTION) $< $(COMPILE.f) $(OUTPUT_OPTION) $< $(COMPILE.p) $(OUTPUT_OPTION) $< $(COMPILE.F) $(OUTPUT_OPTION) $< $(COMPILE.r) $(OUTPUT_OPTION) $< $(YACC.y) $< $(LINT.c) -C$* y.tab.c $(RM) y.tab.c @$(RM) $*.c $(LEX.l) $< > $*.c $(LINT.c) -i $*.c -o $@ $(RM) $*.c $(YACC.y) $< mv -f y.tab.c $@ $(PREPROCESS.F) $(OUTPUT_OPTION) $< $(PREPROCESS.r) $(OUTPUT_OPTION) $< $(LEX.l) $< > $@ mv -f lex.yy.r $@ $(MAKEINFO) $(MAKEINFO_FLAGS) $< -o $@ $(TEXI2DVI) $(TEXI2DVI_FLAGS) $< # Directories # %s: could not be stat'd. files, impossibilities so far. # %s (device %ld, inode %ld): could not be opened. # %s (device %ld, inode %ld): impossibilities in %lu directories. unterminated variable reference warning: undefined variable `%.*s' Recursive variable `%s' references itself (eventually) # Files # files hash-table stats: %04d-%02d-%02d %02d:%02d:%02d .%09d # Not a target: %s:%s | %s # Command-line target. # Also makes: # File does not exist. # File is very old. # Last modified %s # File has been updated. # File has not been updated. # Successfully updated. file.c question_flag # Failed to be updated. Current time *name != '\0' .PRECIOUS .LOW_RESOLUTION_TIME .PHONY .INTERMEDIATE .SECONDARY .EXPORT_ALL_VARIABLES .IGNORE .SILENT .NOTPARALLEL # Precious file (prerequisite of .PRECIOUS). # Phony target (prerequisite of .PHONY). # A default, MAKEFILES, or -include/sinclude makefile. # Implicit rule search has been done. # Implicit rule search has not been done. # Implicit/static pattern stem: `%s' # File is an intermediate prerequisite. # Modification time never checked. # Commands currently running (THIS IS A BUG). # Dependencies commands running (THIS IS A BUG). # Needs to be updated (-q is set). # Invalid value in `update_status' member! # Invalid value in `command_state' member! %s: Timestamp out of range; substituting %s *** Deleting intermediate file `%s' Removing intermediate files... Commands were specified for file `%s' at %s:%lu, Commands for file `%s' were found by implicit rule search, but `%s' is now considered the same file as `%s'. Commands for `%s' will be ignored in favor of those for `%s'. can't rename single-colon `%s' to double-colon `%s' can't rename double-colon `%s' to single-colon `%s' print_file enter_file lookup_file undefined recursive simple %s: '%s' default environment environment override command line automatic basename addprefix %s:%lu: filter abspath addsuffix notdir filter-out findstring firstword flavor join lastword patsubst realpath shell sort strip wildcard wordlist words origin foreach call warning value eval Internal error: func_error: '%s' insufficient number of arguments (%d) to function `%s' unimplemented on this platform: function `%s' non-numeric first argument to `wordlist' function non-numeric second argument to `wordlist' function invalid first argument to `wordlist' function: `%d' non-numeric first argument to `word' function first argument to `word' function must be greater than 0 Cleaning up temporary batch file %s unterminated call to function `%s': missing `%c' Avoiding implicit rule recursion. Trying pattern rule with stem `%.*s'. Rejecting impossible implicit prerequisite `%s'. Rejecting impossible rule prerequisite `%s'. Trying implicit prerequisite `%s'. Trying rule prerequisite `%s'. Found prerequisite `%s' as VPATH `%s' Looking for a rule with intermediate file `%s'. Looking for an implicit rule for `%s'. Looking for archive-member implicit rule for `%s'. job.c ap <= end $(SHELL) $(IFS) %s: Command not found SHELL %s: Shell program not found execvp: write jobserver /bin/sh vfork cannot enforce load limit: getloadavg (remote) [%s] Error %d (ignored) *** [%s] Error %d (core dumped) *** [%s] %s%s remote_status wait .DELETE_ON_ERROR don't Duplicate the job FD read jobs pipe Read returned EBADF. break case continue exec exit login logout read readonly shift switch test trap umask while %s (line %d) Bad shell context (!unixy && !batch_mode_shell) INTERNAL: Freeing child 0x%08lx (%s) but no tokens left! Released token for child 0x%08lx (%s). cannot enforce load limits on this operating system Estimated system load = %f (actual = %f) (max requested = %f) Putting child 0x%08lx (%s) PID %ld%s on the chain. f->command_state == cs_finished *** Waiting for unfinished jobs.... Live child 0x%08lx (%s) PID %ld %s Reaping losing child 0x%08lx PID %ld %s Reaping winning child 0x%08lx PID %ld %s Cleaning up temp batch file %s Removing child 0x%08lx PID %ld%s from chain. Need a job token; we %shave children INTERNAL: no children as we go to sleep on read Obtained token for child 0x%08lx (%s). construct_command_argv_internal start_waiting_job ?%s: Entering directory `%s' %s: Leaving directory `%s' %sThis program built for %s write MAKECMDGOALS Options: This program built for %s MFLAGS MAKEFLAGS /usr/share/locale getcwd .VARIABLES .FEATURES archives check-symlink MAKE_RESTARTS MAKE_COMMAND $(MAKE_COMMAND) MAKE -*-command-variables-*- ${-*-command-variables-*-} MAKEOVERRIDES MAKELEVEL CURDIR TMPDIR /tmp fopen (temporary file) fwrite (temporary file) .DEFAULT .DEFAULT_GOAL %d,%d dup jobserver creating jobs pipe init jobserver pipe Updating makefiles.... Makefile `%s' was not found chdir Re-executing[%u]: %s=%u MAKE_RESTARTS= MAKE_RESTARTS=%u main.c unlink (temporary file): No targets Updating goal targets.... always-make basic debug environment-overrides help ignore-errors include-dir jobs jobserver-fds load-average check-symlink-times just-print old-file print-data-base question no-builtin-rules no-builtin-variables silent no-keep-going touch version no-print-directory what-if warn-undefined-variables quiet stop new-file assume-new assume-old max-load dry-run recon %s: Entering an unknown directory %s: Leaving an unknown directory %s[%u]: Entering an unknown directory %s[%u]: Leaving an unknown directory %s[%u]: Entering directory `%s' %s[%u]: Leaving directory `%s' %sGNU Make %s %sCopyright (C) 2006 Free Software Foundation, Inc. %sThis is free software; see the source for copying conditions. %sThere is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A %sPARTICULAR PURPOSE. %sThis program built for %s (%s) # Make data base, printed on %s # Finished Make data base on %s INTERNAL: Exiting with %u jobserver tokens (should be 0)! INTERNAL: Exiting with %u jobserver tokens available; should be %u! empty string invalid as file name the `-%c' option requires a non-empty string argument the `-%c' option requires a positive integral argument Usage: %s [options] [target] ... This program built for %s (%s) Report bugs to target-specific order-only second-expansion else-if unknown debug level specification `%s' Makefile from standard input specified twice. internal error: multiple --jobserver-fds options internal error: invalid --jobserver-fds string `%s' warning: -jN forced in submake: disabling jobserver mode. warning: jobserver unavailable: using -j1. Add `+' to parent make rule. Makefile `%s' might loop; not remaking it. Failed to remake makefile `%s'. Included makefile `%s' was not found. .DEFAULT_GOAL contains more than one target No targets specified and no makefile found warning: Clock skew detected. Your build may be incomplete. Couldn't change back to original directory. -b, -m Ignored for compatibility. -B, --always-make Unconditionally make all targets. -C DIRECTORY, --directory=DIRECTORY Change to DIRECTORY before doing anything. -d Print lots of debugging information. --debug[=FLAGS] Print various types of debugging information. -e, --environment-overrides Environment variables override makefiles. -f FILE, --file=FILE, --makefile=FILE Read FILE as a makefile. -h, --help Print this message and exit. -i, --ignore-errors Ignore errors from commands. -I DIRECTORY, --include-dir=DIRECTORY Search DIRECTORY for included makefiles. -j [N], --jobs[=N] Allow N jobs at once; infinite jobs with no arg. -k, --keep-going Keep going when some targets can't be made. -l [N], --load-average[=N], --max-load[=N] Don't start multiple jobs unless load is below N. -L, --check-symlink-times Use the latest mtime between symlinks and target. -n, --just-print, --dry-run, --recon Don't actually run any commands; just print them. -o FILE, --old-file=FILE, --assume-old=FILE Consider FILE to be very old and don't remake it. -p, --print-data-base Print make's internal database. -q, --question Run no commands; exit status says if up to date. -r, --no-builtin-rules Disable the built-in implicit rules. -R, --no-builtin-variables Disable the built-in variable settings. -s, --silent, --quiet Don't echo commands. -S, --no-keep-going, --stop Turns off -k. -t, --touch Touch targets instead of remaking them. -v, --version Print the version number of make and exit. -w, --print-directory Print the current directory. --no-print-directory Turn off -w, even if it was turned on implicitly. -W FILE, --what-if=FILE, --new-file=FILE, --assume-new=FILE Consider FILE to be infinitely new. --warn-undefined-variables Warn when an undefined variable is referenced. main %s:%lu: *** %s: *** %s[%u]: *** . Stop. virtual memory exhausted %s: %s[%u]: write error: %s write error %s%s: %s $(HOME) HOME /usr/include .INCLUDE_DIRS define endef ifdef ifndef ifeq ifneq else endif extraneous `%s' .POSIX .SECONDEXPANSION invalid syntax in conditional extraneous `endef' empty variable name empty `override' directive invalid `override' directive unexport vpath -include sinclude missing rule before commands missing separator%s read.c *p2 != '\0' v != 0 missing target pattern multiple target patterns missing `endif' Reading makefile `%s' (no default goal) (search path) (don't care) (no ~ expansion) MAKEFILE_LIST Reading makefiles... $(MAKEFILES) /usr/gnu/include /usr/local/include GNUmakefile Makefile warning: NUL character seen; rest of line ignored Extraneous text after `endef' directive missing `endef', unterminated `define' Extraneous text after `%s' directive only one `else' per conditional prerequisites cannot be defined in command scripts mixed implicit and static pattern rules mixed implicit and normal rules target `%s' doesn't match the target pattern target file `%s' has both : and :: entries target `%s' given more than once in the same rule. warning: overriding commands for target `%s' warning: ignoring old commands for target `%s' commands commence before first target (did you mean TAB instead of 8 spaces?) Malformed target-specific variable definition target pattern contains no `%%' eval record_target_var lstat: readlink: $(strip $(.LIBPATTERNS)) %s/%s touch %s touch: open: touch: fstat: touch: read: touch: lseek: touch: write: Pruning file `%s'. Still updating file `%s'. Finished updating file `%s'. File `%s' does not exist. No need to remake target `%s' ; using VPATH name `%s' Must remake target `%s'. Ignoring VPATH name `%s'. remake.c Nothing to be done for `%s'. `%s' is up to date. /usr/lib64 /usr/lib .LIBPATTERNS element `%s' is not a pattern Warning: File `%s' has modification time %.2g s in the future %sNo rule to make target `%s'%s %sNo rule to make target `%s', needed by `%s'%s Considering target file `%s'. Recently tried and failed to update file `%s'. File `%s' was considered already. *** Warning: .LOW_RESOLUTION_TIME file `%s' has a high resolution time stamp Found an implicit rule for `%s'. No implicit rule found for `%s'. Using default commands for `%s'. Circular %s <- %s dependency dropped. Finished prerequisites of target file `%s'. The prerequisites of `%s' are being made. Giving up on target file `%s'. Target `%s' not remade because of errors. Prerequisite `%s' is order-only for target `%s'. Prerequisite `%s' of target `%s' does not exist. Prerequisite `%s' is newer than target `%s'. Prerequisite `%s' is older than target `%s'. Target `%s' is double-colon and has no prerequisites. No commands for `%s' and no prerequisites actually changed. Making `%s' due to always-make flag. Commands of `%s' are being run. Failed to remake target file `%s'. Successfully remade target file `%s'. Target file `%s' needs remade under -q. file->update_status >= 0 && file->update_status <= 2 update_file_1 # Implicit Rules # No implicit rules. # %u implicit rules, %u (%.1f%%) terminal. (%.o) BUG: num_pattern_rules wrong! %u != %u %s # of strings in strcache: %d %s strcache size: total = %d / max = %d / min = %d / avg = %d %s strcache free: total = %d / max = %d / min = %d / avg = %d %s # of strcache buffers: %d strcache.c best->bytesfree > len add_string environment under -e (from `%s', line %lu) define %s endef %s %s= $(subst ,,%s) # Variables %s : variable.c %s%s%s MAKE_VERSION MAKEFILES $(patsubst %/,%,$(dir $@)) $(patsubst %/,%,$(dir $%)) $(patsubst %/,%,$(dir $*)) $(patsubst %/,%,$(dir $<)) $(patsubst %/,%,$(dir $?)) $(patsubst %/,%,$(dir $^)) $(patsubst %/,%,$(dir $+)) $(notdir $@) $(notdir $%) $(notdir $*) $(notdir $<) $(notdir $?) $(notdir $^) $(notdir $+) pop_variable_scope # variable set hash-table stats: # Pattern-specific Variable Values # %u pattern-specific variable values # No pattern-specific variable values. current_variable_set_list->next != ((void *)0) 3.81 x86_64-unknown-linux-gnu # VPATH Search Paths vpath %s %s%c # No `vpath' search paths. # %u `vpath' search paths. $(strip $(VPATH)) $(strip $(GPATH)) # No general (`VPATH' variable) search path. # General (`VPATH' variable) search path: Load=%ld/%ld=%.0f%%, Rehash=%d, Collisions=%ld/%ld=%.0f%% can't allocate %ld bytes for hash table: memory exhausted .out .a .ln .o .c .cc .C .cpp .p .f .F .r .y .l .s .S .mod .sym .def .h .info .dvi .tex .texinfo .texi .txinfo .w .ch .web .sh .elc .el /bin/sh -c #;"*?[]&|<>(){}$`^~! Defined make macro "OMAKE " to "/usr/bin/make --no-print-directory" Defined make rule "libc" with dependencies "${LIBNAME}(${OBJSC})" and code [] Defined make rule "libcu" with dependencies "${LIBNAME}(${OBJSCU})" and code [] Defined make rule "libf" with dependencies "${OBJSF}" and code -${AR} ${AR_FLAGS} ${LIBNAME} ${OBJSF} module multiprocessing found 32 cores: using make_np = 10 Defined make macro "MAKE_NP" to "10" ================================================================================ TEST configureMkdir from config.programs(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/programs.py:111) TESTING: configureMkdir from config.programs(config/BuildSystem/config/programs.py:111) Make sure we can have mkdir automatically make intermediate directories Checking for program /usr/common/usg/darshan/2.2.6/bin/mkdir...not found Checking for program /scratch/altd/1.0/bin/mkdir...not found Checking for program /usr/common/usg/bin/mkdir...not found Checking for program /usr/common/mss/bin/mkdir...not found Checking for program /usr/common/nsg/bin/mkdir...not found Checking for program /global/common/carver/usg/matlab/R2012a/bin/mkdir...not found Checking for program /opt/cray/netcdf/4.3.0/bin/mkdir...not found Checking for program /opt/cray/hdf5/1.8.11/bin/mkdir...not found Checking for program /usr/common/usg/allineatools/4.2-34404/bin/mkdir...not found Checking for program /usr/common/usg/ipm/2.00/bin/mkdir...not found Checking for program /opt/cray/papi/5.1.2/perf_events/no-cuda/bin/mkdir...not found Checking for program /usr/common/graphics/visit/bin/mkdir...not found Checking for program /usr/common/usg/cmake/2.8.10.1/bin/mkdir...not found Checking for program /opt/cray/atp/1.7.0/bin/mkdir...not found Checking for program /opt/cray/switch/1.0-1.0402.45840.2.63.gem/bin/mkdir...not found Checking for program /opt/cray/shared-root/1.0-1.0402.46893.3.17.gem/bin/mkdir...not found Checking for program /opt/cray/pdsh/2.26-1.0402.45278.1.1.gem/bin/mkdir...not found Checking for program /opt/cray/nodehealth/5.1-1.0402.45895.3.76.gem/bin/mkdir...not found Checking for program /opt/cray/lbcd/2.1-1.0402.45245.1.2.gem/bin/mkdir...not found Checking for program /opt/cray/hosts/1.0-1.0402.45251.1.86.gem/bin/mkdir...not found Checking for program /opt/cray/configuration/1.0-1.0402.45284.1.2.gem/bin/mkdir...not found Checking for program /opt/cray/ccm/default/sbin/mkdir...not found Checking for program /opt/cray/ccm/default/bin/mkdir...not found Checking for program /opt/cray/audit/1.0.0-1.0402.45273.1.86.gem/bin/mkdir...not found Checking for program /opt/cray/rca/1.0.0-2.0402.47290.7.1.gem/bin/mkdir...not found Checking for program /opt/cray/csa/3.0.0-1_2.0402.45268.1.90.gem/sbin/mkdir...not found Checking for program /opt/cray/csa/3.0.0-1_2.0402.45268.1.90.gem/bin/mkdir...not found Checking for program /opt/cray/job/1.5.5-0.1_2.0402.45272.1.5.gem/bin/mkdir...not found Checking for program /opt/cray/xpmem/0.1-2.0402.45248.1.5.gem/bin/mkdir...not found Checking for program /opt/cray/dmapp/4.0.1-1.0402.7784.4.1.gem/bin/mkdir...not found Checking for program /opt/cray/pmi/4.0.1-1.0000.9753.86.3.gem/bin/mkdir...not found Checking for program /opt/cray/ugni/5.0-1.0402.7551.1.10.gem/bin/mkdir...not found Checking for program /opt/cray/udreg/2.3.2-1.0402.7546.1.5.gem/bin/mkdir...not found Checking for program /opt/gcc/4.8.1/bin/mkdir...not found Checking for program /opt/cray/xt-asyncpe/5.23/bin/mkdir...not found Checking for program /usr/common/usg/valgrind/3.8.1/bin/mkdir...not found Checking for program /global/homes/m/madams/git-fat/mkdir...not found Checking for program /opt/moab/7.2.3_notcpretry/bin/mkdir...not found Checking for program /opt/moab/7.2.3_notcpretry/sbin/mkdir...not found Checking for program /opt/torque/4.2.3.h5_notcpretry/sbin/mkdir...not found Checking for program /opt/torque/4.2.3.h5_notcpretry/bin/mkdir...not found Checking for program /opt/cray/eslogin/eswrap/1.0.20-1.010102.662.0/bin/mkdir...not found Checking for program /opt/modules/3.2.6.7/bin/mkdir...not found Checking for program /usr/syscom/nsg/sbin/mkdir...not found Checking for program /usr/syscom/nsg/bin/mkdir...not found Checking for program /opt/modules/3.2.6.6/bin/mkdir...not found Checking for program /usr/lpp/mmfs/bin/mkdir...not found Checking for program /usr/local/bin/mkdir...not found Checking for program /usr/bin/mkdir...not found Checking for program /bin/mkdir...found sh: /bin/mkdir -p .conftest/tmp Executing: /bin/mkdir -p .conftest/tmp sh: Adding -p flag to /bin/mkdir -p to automatically create directories Defined make macro "MKDIR" to "/bin/mkdir -p" ================================================================================ TEST configurePrograms from config.programs(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/programs.py:133) TESTING: configurePrograms from config.programs(config/BuildSystem/config/programs.py:133) Check for the programs needed to build and run PETSc Checking for program /usr/common/usg/darshan/2.2.6/bin/sh...not found Checking for program /scratch/altd/1.0/bin/sh...not found Checking for program /usr/common/usg/bin/sh...not found Checking for program /usr/common/mss/bin/sh...not found Checking for program /usr/common/nsg/bin/sh...not found Checking for program /global/common/carver/usg/matlab/R2012a/bin/sh...not found Checking for program /opt/cray/netcdf/4.3.0/bin/sh...not found Checking for program /opt/cray/hdf5/1.8.11/bin/sh...not found Checking for program /usr/common/usg/allineatools/4.2-34404/bin/sh...not found Checking for program /usr/common/usg/ipm/2.00/bin/sh...not found Checking for program /opt/cray/papi/5.1.2/perf_events/no-cuda/bin/sh...not found Checking for program /usr/common/graphics/visit/bin/sh...not found Checking for program /usr/common/usg/cmake/2.8.10.1/bin/sh...not found Checking for program /opt/cray/atp/1.7.0/bin/sh...not found Checking for program /opt/cray/switch/1.0-1.0402.45840.2.63.gem/bin/sh...not found Checking for program /opt/cray/shared-root/1.0-1.0402.46893.3.17.gem/bin/sh...not found Checking for program /opt/cray/pdsh/2.26-1.0402.45278.1.1.gem/bin/sh...not found Checking for program /opt/cray/nodehealth/5.1-1.0402.45895.3.76.gem/bin/sh...not found Checking for program /opt/cray/lbcd/2.1-1.0402.45245.1.2.gem/bin/sh...not found Checking for program /opt/cray/hosts/1.0-1.0402.45251.1.86.gem/bin/sh...not found Checking for program /opt/cray/configuration/1.0-1.0402.45284.1.2.gem/bin/sh...not found Checking for program /opt/cray/ccm/default/sbin/sh...not found Checking for program /opt/cray/ccm/default/bin/sh...not found Checking for program /opt/cray/audit/1.0.0-1.0402.45273.1.86.gem/bin/sh...not found Checking for program /opt/cray/rca/1.0.0-2.0402.47290.7.1.gem/bin/sh...not found Checking for program /opt/cray/csa/3.0.0-1_2.0402.45268.1.90.gem/sbin/sh...not found Checking for program /opt/cray/csa/3.0.0-1_2.0402.45268.1.90.gem/bin/sh...not found Checking for program /opt/cray/job/1.5.5-0.1_2.0402.45272.1.5.gem/bin/sh...not found Checking for program /opt/cray/xpmem/0.1-2.0402.45248.1.5.gem/bin/sh...not found Checking for program /opt/cray/dmapp/4.0.1-1.0402.7784.4.1.gem/bin/sh...not found Checking for program /opt/cray/pmi/4.0.1-1.0000.9753.86.3.gem/bin/sh...not found Checking for program /opt/cray/ugni/5.0-1.0402.7551.1.10.gem/bin/sh...not found Checking for program /opt/cray/udreg/2.3.2-1.0402.7546.1.5.gem/bin/sh...not found Checking for program /opt/gcc/4.8.1/bin/sh...not found Checking for program /opt/cray/xt-asyncpe/5.23/bin/sh...not found Checking for program /usr/common/usg/valgrind/3.8.1/bin/sh...not found Checking for program /global/homes/m/madams/git-fat/sh...not found Checking for program /opt/moab/7.2.3_notcpretry/bin/sh...not found Checking for program /opt/moab/7.2.3_notcpretry/sbin/sh...not found Checking for program /opt/torque/4.2.3.h5_notcpretry/sbin/sh...not found Checking for program /opt/torque/4.2.3.h5_notcpretry/bin/sh...not found Checking for program /opt/cray/eslogin/eswrap/1.0.20-1.010102.662.0/bin/sh...not found Checking for program /opt/modules/3.2.6.7/bin/sh...not found Checking for program /usr/syscom/nsg/sbin/sh...not found Checking for program /usr/syscom/nsg/bin/sh...not found Checking for program /opt/modules/3.2.6.6/bin/sh...not found Checking for program /usr/lpp/mmfs/bin/sh...not found Checking for program /usr/local/bin/sh...not found Checking for program /usr/bin/sh...found Defined make macro "SHELL" to "/usr/bin/sh" Checking for program /usr/common/usg/darshan/2.2.6/bin/sed...not found Checking for program /scratch/altd/1.0/bin/sed...not found Checking for program /usr/common/usg/bin/sed...not found Checking for program /usr/common/mss/bin/sed...not found Checking for program /usr/common/nsg/bin/sed...not found Checking for program /global/common/carver/usg/matlab/R2012a/bin/sed...not found Checking for program /opt/cray/netcdf/4.3.0/bin/sed...not found Checking for program /opt/cray/hdf5/1.8.11/bin/sed...not found Checking for program /usr/common/usg/allineatools/4.2-34404/bin/sed...not found Checking for program /usr/common/usg/ipm/2.00/bin/sed...not found Checking for program /opt/cray/papi/5.1.2/perf_events/no-cuda/bin/sed...not found Checking for program /usr/common/graphics/visit/bin/sed...not found Checking for program /usr/common/usg/cmake/2.8.10.1/bin/sed...not found Checking for program /opt/cray/atp/1.7.0/bin/sed...not found Checking for program /opt/cray/switch/1.0-1.0402.45840.2.63.gem/bin/sed...not found Checking for program /opt/cray/shared-root/1.0-1.0402.46893.3.17.gem/bin/sed...not found Checking for program /opt/cray/pdsh/2.26-1.0402.45278.1.1.gem/bin/sed...not found Checking for program /opt/cray/nodehealth/5.1-1.0402.45895.3.76.gem/bin/sed...not found Checking for program /opt/cray/lbcd/2.1-1.0402.45245.1.2.gem/bin/sed...not found Checking for program /opt/cray/hosts/1.0-1.0402.45251.1.86.gem/bin/sed...not found Checking for program /opt/cray/configuration/1.0-1.0402.45284.1.2.gem/bin/sed...not found Checking for program /opt/cray/ccm/default/sbin/sed...not found Checking for program /opt/cray/ccm/default/bin/sed...not found Checking for program /opt/cray/audit/1.0.0-1.0402.45273.1.86.gem/bin/sed...not found Checking for program /opt/cray/rca/1.0.0-2.0402.47290.7.1.gem/bin/sed...not found Checking for program /opt/cray/csa/3.0.0-1_2.0402.45268.1.90.gem/sbin/sed...not found Checking for program /opt/cray/csa/3.0.0-1_2.0402.45268.1.90.gem/bin/sed...not found Checking for program /opt/cray/job/1.5.5-0.1_2.0402.45272.1.5.gem/bin/sed...not found Checking for program /opt/cray/xpmem/0.1-2.0402.45248.1.5.gem/bin/sed...not found Checking for program /opt/cray/dmapp/4.0.1-1.0402.7784.4.1.gem/bin/sed...not found Checking for program /opt/cray/pmi/4.0.1-1.0000.9753.86.3.gem/bin/sed...not found Checking for program /opt/cray/ugni/5.0-1.0402.7551.1.10.gem/bin/sed...not found Checking for program /opt/cray/udreg/2.3.2-1.0402.7546.1.5.gem/bin/sed...not found Checking for program /opt/gcc/4.8.1/bin/sed...not found Checking for program /opt/cray/xt-asyncpe/5.23/bin/sed...not found Checking for program /usr/common/usg/valgrind/3.8.1/bin/sed...not found Checking for program /global/homes/m/madams/git-fat/sed...not found Checking for program /opt/moab/7.2.3_notcpretry/bin/sed...not found Checking for program /opt/moab/7.2.3_notcpretry/sbin/sed...not found Checking for program /opt/torque/4.2.3.h5_notcpretry/sbin/sed...not found Checking for program /opt/torque/4.2.3.h5_notcpretry/bin/sed...not found Checking for program /opt/cray/eslogin/eswrap/1.0.20-1.010102.662.0/bin/sed...not found Checking for program /opt/modules/3.2.6.7/bin/sed...not found Checking for program /usr/syscom/nsg/sbin/sed...not found Checking for program /usr/syscom/nsg/bin/sed...not found Checking for program /opt/modules/3.2.6.6/bin/sed...not found Checking for program /usr/lpp/mmfs/bin/sed...not found Checking for program /usr/local/bin/sed...not found Checking for program /usr/bin/sed...found Defined make macro "SED" to "/usr/bin/sed" All intermediate test results are stored in /scratch/scratchdirs/madams/petsc-i5209_ All intermediate test results are stored in /scratch/scratchdirs/madams/petsc-i5209_/config.programs sh: /usr/bin/sed -i s/sed/sd/g "/scratch/scratchdirs/madams/petsc-i5209_/config.programs/sed1" Executing: /usr/bin/sed -i s/sed/sd/g "/scratch/scratchdirs/madams/petsc-i5209_/config.programs/sed1" sh: Adding SEDINPLACE cmd: /usr/bin/sed -i Defined make macro "SEDINPLACE" to "/usr/bin/sed -i" Checking for program /usr/common/usg/darshan/2.2.6/bin/mv...not found Checking for program /scratch/altd/1.0/bin/mv...not found Checking for program /usr/common/usg/bin/mv...not found Checking for program /usr/common/mss/bin/mv...not found Checking for program /usr/common/nsg/bin/mv...not found Checking for program /global/common/carver/usg/matlab/R2012a/bin/mv...not found Checking for program /opt/cray/netcdf/4.3.0/bin/mv...not found Checking for program /opt/cray/hdf5/1.8.11/bin/mv...not found Checking for program /usr/common/usg/allineatools/4.2-34404/bin/mv...not found Checking for program /usr/common/usg/ipm/2.00/bin/mv...not found Checking for program /opt/cray/papi/5.1.2/perf_events/no-cuda/bin/mv...not found Checking for program /usr/common/graphics/visit/bin/mv...not found Checking for program /usr/common/usg/cmake/2.8.10.1/bin/mv...not found Checking for program /opt/cray/atp/1.7.0/bin/mv...not found Checking for program /opt/cray/switch/1.0-1.0402.45840.2.63.gem/bin/mv...not found Checking for program /opt/cray/shared-root/1.0-1.0402.46893.3.17.gem/bin/mv...not found Checking for program /opt/cray/pdsh/2.26-1.0402.45278.1.1.gem/bin/mv...not found Checking for program /opt/cray/nodehealth/5.1-1.0402.45895.3.76.gem/bin/mv...not found Checking for program /opt/cray/lbcd/2.1-1.0402.45245.1.2.gem/bin/mv...not found Checking for program /opt/cray/hosts/1.0-1.0402.45251.1.86.gem/bin/mv...not found Checking for program /opt/cray/configuration/1.0-1.0402.45284.1.2.gem/bin/mv...not found Checking for program /opt/cray/ccm/default/sbin/mv...not found Checking for program /opt/cray/ccm/default/bin/mv...not found Checking for program /opt/cray/audit/1.0.0-1.0402.45273.1.86.gem/bin/mv...not found Checking for program /opt/cray/rca/1.0.0-2.0402.47290.7.1.gem/bin/mv...not found Checking for program /opt/cray/csa/3.0.0-1_2.0402.45268.1.90.gem/sbin/mv...not found Checking for program /opt/cray/csa/3.0.0-1_2.0402.45268.1.90.gem/bin/mv...not found Checking for program /opt/cray/job/1.5.5-0.1_2.0402.45272.1.5.gem/bin/mv...not found Checking for program /opt/cray/xpmem/0.1-2.0402.45248.1.5.gem/bin/mv...not found Checking for program /opt/cray/dmapp/4.0.1-1.0402.7784.4.1.gem/bin/mv...not found Checking for program /opt/cray/pmi/4.0.1-1.0000.9753.86.3.gem/bin/mv...not found Checking for program /opt/cray/ugni/5.0-1.0402.7551.1.10.gem/bin/mv...not found Checking for program /opt/cray/udreg/2.3.2-1.0402.7546.1.5.gem/bin/mv...not found Checking for program /opt/gcc/4.8.1/bin/mv...not found Checking for program /opt/cray/xt-asyncpe/5.23/bin/mv...not found Checking for program /usr/common/usg/valgrind/3.8.1/bin/mv...not found Checking for program /global/homes/m/madams/git-fat/mv...not found Checking for program /opt/moab/7.2.3_notcpretry/bin/mv...not found Checking for program /opt/moab/7.2.3_notcpretry/sbin/mv...not found Checking for program /opt/torque/4.2.3.h5_notcpretry/sbin/mv...not found Checking for program /opt/torque/4.2.3.h5_notcpretry/bin/mv...not found Checking for program /opt/cray/eslogin/eswrap/1.0.20-1.010102.662.0/bin/mv...not found Checking for program /opt/modules/3.2.6.7/bin/mv...not found Checking for program /usr/syscom/nsg/sbin/mv...not found Checking for program /usr/syscom/nsg/bin/mv...not found Checking for program /opt/modules/3.2.6.6/bin/mv...not found Checking for program /usr/lpp/mmfs/bin/mv...not found Checking for program /usr/local/bin/mv...not found Checking for program /usr/bin/mv...not found Checking for program /bin/mv...found Defined make macro "MV" to "/bin/mv" Checking for program /usr/common/usg/darshan/2.2.6/bin/cp...not found Checking for program /scratch/altd/1.0/bin/cp...not found Checking for program /usr/common/usg/bin/cp...not found Checking for program /usr/common/mss/bin/cp...not found Checking for program /usr/common/nsg/bin/cp...not found Checking for program /global/common/carver/usg/matlab/R2012a/bin/cp...not found Checking for program /opt/cray/netcdf/4.3.0/bin/cp...not found Checking for program /opt/cray/hdf5/1.8.11/bin/cp...not found Checking for program /usr/common/usg/allineatools/4.2-34404/bin/cp...not found Checking for program /usr/common/usg/ipm/2.00/bin/cp...not found Checking for program /opt/cray/papi/5.1.2/perf_events/no-cuda/bin/cp...not found Checking for program /usr/common/graphics/visit/bin/cp...not found Checking for program /usr/common/usg/cmake/2.8.10.1/bin/cp...not found Checking for program /opt/cray/atp/1.7.0/bin/cp...not found Checking for program /opt/cray/switch/1.0-1.0402.45840.2.63.gem/bin/cp...not found Checking for program /opt/cray/shared-root/1.0-1.0402.46893.3.17.gem/bin/cp...not found Checking for program /opt/cray/pdsh/2.26-1.0402.45278.1.1.gem/bin/cp...not found Checking for program /opt/cray/nodehealth/5.1-1.0402.45895.3.76.gem/bin/cp...not found Checking for program /opt/cray/lbcd/2.1-1.0402.45245.1.2.gem/bin/cp...not found Checking for program /opt/cray/hosts/1.0-1.0402.45251.1.86.gem/bin/cp...not found Checking for program /opt/cray/configuration/1.0-1.0402.45284.1.2.gem/bin/cp...not found Checking for program /opt/cray/ccm/default/sbin/cp...not found Checking for program /opt/cray/ccm/default/bin/cp...not found Checking for program /opt/cray/audit/1.0.0-1.0402.45273.1.86.gem/bin/cp...not found Checking for program /opt/cray/rca/1.0.0-2.0402.47290.7.1.gem/bin/cp...not found Checking for program /opt/cray/csa/3.0.0-1_2.0402.45268.1.90.gem/sbin/cp...not found Checking for program /opt/cray/csa/3.0.0-1_2.0402.45268.1.90.gem/bin/cp...not found Checking for program /opt/cray/job/1.5.5-0.1_2.0402.45272.1.5.gem/bin/cp...not found Checking for program /opt/cray/xpmem/0.1-2.0402.45248.1.5.gem/bin/cp...not found Checking for program /opt/cray/dmapp/4.0.1-1.0402.7784.4.1.gem/bin/cp...not found Checking for program /opt/cray/pmi/4.0.1-1.0000.9753.86.3.gem/bin/cp...not found Checking for program /opt/cray/ugni/5.0-1.0402.7551.1.10.gem/bin/cp...not found Checking for program /opt/cray/udreg/2.3.2-1.0402.7546.1.5.gem/bin/cp...not found Checking for program /opt/gcc/4.8.1/bin/cp...not found Checking for program /opt/cray/xt-asyncpe/5.23/bin/cp...not found Checking for program /usr/common/usg/valgrind/3.8.1/bin/cp...not found Checking for program /global/homes/m/madams/git-fat/cp...not found Checking for program /opt/moab/7.2.3_notcpretry/bin/cp...not found Checking for program /opt/moab/7.2.3_notcpretry/sbin/cp...not found Checking for program /opt/torque/4.2.3.h5_notcpretry/sbin/cp...not found Checking for program /opt/torque/4.2.3.h5_notcpretry/bin/cp...not found Checking for program /opt/cray/eslogin/eswrap/1.0.20-1.010102.662.0/bin/cp...not found Checking for program /opt/modules/3.2.6.7/bin/cp...not found Checking for program /usr/syscom/nsg/sbin/cp...not found Checking for program /usr/syscom/nsg/bin/cp...not found Checking for program /opt/modules/3.2.6.6/bin/cp...not found Checking for program /usr/lpp/mmfs/bin/cp...not found Checking for program /usr/local/bin/cp...not found Checking for program /usr/bin/cp...not found Checking for program /bin/cp...found Defined make macro "CP" to "/bin/cp" Checking for program /usr/common/usg/darshan/2.2.6/bin/grep...not found Checking for program /scratch/altd/1.0/bin/grep...not found Checking for program /usr/common/usg/bin/grep...not found Checking for program /usr/common/mss/bin/grep...not found Checking for program /usr/common/nsg/bin/grep...not found Checking for program /global/common/carver/usg/matlab/R2012a/bin/grep...not found Checking for program /opt/cray/netcdf/4.3.0/bin/grep...not found Checking for program /opt/cray/hdf5/1.8.11/bin/grep...not found Checking for program /usr/common/usg/allineatools/4.2-34404/bin/grep...not found Checking for program /usr/common/usg/ipm/2.00/bin/grep...not found Checking for program /opt/cray/papi/5.1.2/perf_events/no-cuda/bin/grep...not found Checking for program /usr/common/graphics/visit/bin/grep...not found Checking for program /usr/common/usg/cmake/2.8.10.1/bin/grep...not found Checking for program /opt/cray/atp/1.7.0/bin/grep...not found Checking for program /opt/cray/switch/1.0-1.0402.45840.2.63.gem/bin/grep...not found Checking for program /opt/cray/shared-root/1.0-1.0402.46893.3.17.gem/bin/grep...not found Checking for program /opt/cray/pdsh/2.26-1.0402.45278.1.1.gem/bin/grep...not found Checking for program /opt/cray/nodehealth/5.1-1.0402.45895.3.76.gem/bin/grep...not found Checking for program /opt/cray/lbcd/2.1-1.0402.45245.1.2.gem/bin/grep...not found Checking for program /opt/cray/hosts/1.0-1.0402.45251.1.86.gem/bin/grep...not found Checking for program /opt/cray/configuration/1.0-1.0402.45284.1.2.gem/bin/grep...not found Checking for program /opt/cray/ccm/default/sbin/grep...not found Checking for program /opt/cray/ccm/default/bin/grep...not found Checking for program /opt/cray/audit/1.0.0-1.0402.45273.1.86.gem/bin/grep...not found Checking for program /opt/cray/rca/1.0.0-2.0402.47290.7.1.gem/bin/grep...not found Checking for program /opt/cray/csa/3.0.0-1_2.0402.45268.1.90.gem/sbin/grep...not found Checking for program /opt/cray/csa/3.0.0-1_2.0402.45268.1.90.gem/bin/grep...not found Checking for program /opt/cray/job/1.5.5-0.1_2.0402.45272.1.5.gem/bin/grep...not found Checking for program /opt/cray/xpmem/0.1-2.0402.45248.1.5.gem/bin/grep...not found Checking for program /opt/cray/dmapp/4.0.1-1.0402.7784.4.1.gem/bin/grep...not found Checking for program /opt/cray/pmi/4.0.1-1.0000.9753.86.3.gem/bin/grep...not found Checking for program /opt/cray/ugni/5.0-1.0402.7551.1.10.gem/bin/grep...not found Checking for program /opt/cray/udreg/2.3.2-1.0402.7546.1.5.gem/bin/grep...not found Checking for program /opt/gcc/4.8.1/bin/grep...not found Checking for program /opt/cray/xt-asyncpe/5.23/bin/grep...not found Checking for program /usr/common/usg/valgrind/3.8.1/bin/grep...not found Checking for program /global/homes/m/madams/git-fat/grep...not found Checking for program /opt/moab/7.2.3_notcpretry/bin/grep...not found Checking for program /opt/moab/7.2.3_notcpretry/sbin/grep...not found Checking for program /opt/torque/4.2.3.h5_notcpretry/sbin/grep...not found Checking for program /opt/torque/4.2.3.h5_notcpretry/bin/grep...not found Checking for program /opt/cray/eslogin/eswrap/1.0.20-1.010102.662.0/bin/grep...not found Checking for program /opt/modules/3.2.6.7/bin/grep...not found Checking for program /usr/syscom/nsg/sbin/grep...not found Checking for program /usr/syscom/nsg/bin/grep...not found Checking for program /opt/modules/3.2.6.6/bin/grep...not found Checking for program /usr/lpp/mmfs/bin/grep...not found Checking for program /usr/local/bin/grep...not found Checking for program /usr/bin/grep...found Defined make macro "GREP" to "/usr/bin/grep" Checking for program /usr/common/usg/darshan/2.2.6/bin/rm...not found Checking for program /scratch/altd/1.0/bin/rm...not found Checking for program /usr/common/usg/bin/rm...not found Checking for program /usr/common/mss/bin/rm...not found Checking for program /usr/common/nsg/bin/rm...not found Checking for program /global/common/carver/usg/matlab/R2012a/bin/rm...not found Checking for program /opt/cray/netcdf/4.3.0/bin/rm...not found Checking for program /opt/cray/hdf5/1.8.11/bin/rm...not found Checking for program /usr/common/usg/allineatools/4.2-34404/bin/rm...not found Checking for program /usr/common/usg/ipm/2.00/bin/rm...not found Checking for program /opt/cray/papi/5.1.2/perf_events/no-cuda/bin/rm...not found Checking for program /usr/common/graphics/visit/bin/rm...not found Checking for program /usr/common/usg/cmake/2.8.10.1/bin/rm...not found Checking for program /opt/cray/atp/1.7.0/bin/rm...not found Checking for program /opt/cray/switch/1.0-1.0402.45840.2.63.gem/bin/rm...not found Checking for program /opt/cray/shared-root/1.0-1.0402.46893.3.17.gem/bin/rm...not found Checking for program /opt/cray/pdsh/2.26-1.0402.45278.1.1.gem/bin/rm...not found Checking for program /opt/cray/nodehealth/5.1-1.0402.45895.3.76.gem/bin/rm...not found Checking for program /opt/cray/lbcd/2.1-1.0402.45245.1.2.gem/bin/rm...not found Checking for program /opt/cray/hosts/1.0-1.0402.45251.1.86.gem/bin/rm...not found Checking for program /opt/cray/configuration/1.0-1.0402.45284.1.2.gem/bin/rm...not found Checking for program /opt/cray/ccm/default/sbin/rm...not found Checking for program /opt/cray/ccm/default/bin/rm...not found Checking for program /opt/cray/audit/1.0.0-1.0402.45273.1.86.gem/bin/rm...not found Checking for program /opt/cray/rca/1.0.0-2.0402.47290.7.1.gem/bin/rm...not found Checking for program /opt/cray/csa/3.0.0-1_2.0402.45268.1.90.gem/sbin/rm...not found Checking for program /opt/cray/csa/3.0.0-1_2.0402.45268.1.90.gem/bin/rm...not found Checking for program /opt/cray/job/1.5.5-0.1_2.0402.45272.1.5.gem/bin/rm...not found Checking for program /opt/cray/xpmem/0.1-2.0402.45248.1.5.gem/bin/rm...not found Checking for program /opt/cray/dmapp/4.0.1-1.0402.7784.4.1.gem/bin/rm...not found Checking for program /opt/cray/pmi/4.0.1-1.0000.9753.86.3.gem/bin/rm...not found Checking for program /opt/cray/ugni/5.0-1.0402.7551.1.10.gem/bin/rm...not found Checking for program /opt/cray/udreg/2.3.2-1.0402.7546.1.5.gem/bin/rm...not found Checking for program /opt/gcc/4.8.1/bin/rm...not found Checking for program /opt/cray/xt-asyncpe/5.23/bin/rm...not found Checking for program /usr/common/usg/valgrind/3.8.1/bin/rm...not found Checking for program /global/homes/m/madams/git-fat/rm...not found Checking for program /opt/moab/7.2.3_notcpretry/bin/rm...not found Checking for program /opt/moab/7.2.3_notcpretry/sbin/rm...not found Checking for program /opt/torque/4.2.3.h5_notcpretry/sbin/rm...not found Checking for program /opt/torque/4.2.3.h5_notcpretry/bin/rm...not found Checking for program /opt/cray/eslogin/eswrap/1.0.20-1.010102.662.0/bin/rm...not found Checking for program /opt/modules/3.2.6.7/bin/rm...not found Checking for program /usr/syscom/nsg/sbin/rm...not found Checking for program /usr/syscom/nsg/bin/rm...not found Checking for program /opt/modules/3.2.6.6/bin/rm...not found Checking for program /usr/lpp/mmfs/bin/rm...not found Checking for program /usr/local/bin/rm...not found Checking for program /usr/bin/rm...not found Checking for program /bin/rm...found Defined make macro "RM" to "/bin/rm -f" Checking for program /usr/common/usg/darshan/2.2.6/bin/diff...not found Checking for program /scratch/altd/1.0/bin/diff...not found Checking for program /usr/common/usg/bin/diff...not found Checking for program /usr/common/mss/bin/diff...not found Checking for program /usr/common/nsg/bin/diff...not found Checking for program /global/common/carver/usg/matlab/R2012a/bin/diff...not found Checking for program /opt/cray/netcdf/4.3.0/bin/diff...not found Checking for program /opt/cray/hdf5/1.8.11/bin/diff...not found Checking for program /usr/common/usg/allineatools/4.2-34404/bin/diff...not found Checking for program /usr/common/usg/ipm/2.00/bin/diff...not found Checking for program /opt/cray/papi/5.1.2/perf_events/no-cuda/bin/diff...not found Checking for program /usr/common/graphics/visit/bin/diff...not found Checking for program /usr/common/usg/cmake/2.8.10.1/bin/diff...not found Checking for program /opt/cray/atp/1.7.0/bin/diff...not found Checking for program /opt/cray/switch/1.0-1.0402.45840.2.63.gem/bin/diff...not found Checking for program /opt/cray/shared-root/1.0-1.0402.46893.3.17.gem/bin/diff...not found Checking for program /opt/cray/pdsh/2.26-1.0402.45278.1.1.gem/bin/diff...not found Checking for program /opt/cray/nodehealth/5.1-1.0402.45895.3.76.gem/bin/diff...not found Checking for program /opt/cray/lbcd/2.1-1.0402.45245.1.2.gem/bin/diff...not found Checking for program /opt/cray/hosts/1.0-1.0402.45251.1.86.gem/bin/diff...not found Checking for program /opt/cray/configuration/1.0-1.0402.45284.1.2.gem/bin/diff...not found Checking for program /opt/cray/ccm/default/sbin/diff...not found Checking for program /opt/cray/ccm/default/bin/diff...not found Checking for program /opt/cray/audit/1.0.0-1.0402.45273.1.86.gem/bin/diff...not found Checking for program /opt/cray/rca/1.0.0-2.0402.47290.7.1.gem/bin/diff...not found Checking for program /opt/cray/csa/3.0.0-1_2.0402.45268.1.90.gem/sbin/diff...not found Checking for program /opt/cray/csa/3.0.0-1_2.0402.45268.1.90.gem/bin/diff...not found Checking for program /opt/cray/job/1.5.5-0.1_2.0402.45272.1.5.gem/bin/diff...not found Checking for program /opt/cray/xpmem/0.1-2.0402.45248.1.5.gem/bin/diff...not found Checking for program /opt/cray/dmapp/4.0.1-1.0402.7784.4.1.gem/bin/diff...not found Checking for program /opt/cray/pmi/4.0.1-1.0000.9753.86.3.gem/bin/diff...not found Checking for program /opt/cray/ugni/5.0-1.0402.7551.1.10.gem/bin/diff...not found Checking for program /opt/cray/udreg/2.3.2-1.0402.7546.1.5.gem/bin/diff...not found Checking for program /opt/gcc/4.8.1/bin/diff...not found Checking for program /opt/cray/xt-asyncpe/5.23/bin/diff...not found Checking for program /usr/common/usg/valgrind/3.8.1/bin/diff...not found Checking for program /global/homes/m/madams/git-fat/diff...not found Checking for program /opt/moab/7.2.3_notcpretry/bin/diff...not found Checking for program /opt/moab/7.2.3_notcpretry/sbin/diff...not found Checking for program /opt/torque/4.2.3.h5_notcpretry/sbin/diff...not found Checking for program /opt/torque/4.2.3.h5_notcpretry/bin/diff...not found Checking for program /opt/cray/eslogin/eswrap/1.0.20-1.010102.662.0/bin/diff...not found Checking for program /opt/modules/3.2.6.7/bin/diff...not found Checking for program /usr/syscom/nsg/sbin/diff...not found Checking for program /usr/syscom/nsg/bin/diff...not found Checking for program /opt/modules/3.2.6.6/bin/diff...not found Checking for program /usr/lpp/mmfs/bin/diff...not found Checking for program /usr/local/bin/diff...not found Checking for program /usr/bin/diff...found sh: "/usr/bin/diff" -w "/scratch/scratchdirs/madams/petsc-i5209_/config.programs/diff1" "/scratch/scratchdirs/madams/petsc-i5209_/config.programs/diff2" Executing: "/usr/bin/diff" -w "/scratch/scratchdirs/madams/petsc-i5209_/config.programs/diff1" "/scratch/scratchdirs/madams/petsc-i5209_/config.programs/diff2" sh: Defined make macro "DIFF" to "/usr/bin/diff -w" Checking for program /usr/ucb/ps...not found Checking for program /usr/usb/ps...not found Checking for program /global/homes/m/madams/ps...not found Checking for program /usr/common/usg/darshan/2.2.6/bin/gzip...not found Checking for program /scratch/altd/1.0/bin/gzip...not found Checking for program /usr/common/usg/bin/gzip...not found Checking for program /usr/common/mss/bin/gzip...not found Checking for program /usr/common/nsg/bin/gzip...not found Checking for program /global/common/carver/usg/matlab/R2012a/bin/gzip...not found Checking for program /opt/cray/netcdf/4.3.0/bin/gzip...not found Checking for program /opt/cray/hdf5/1.8.11/bin/gzip...not found Checking for program /usr/common/usg/allineatools/4.2-34404/bin/gzip...not found Checking for program /usr/common/usg/ipm/2.00/bin/gzip...not found Checking for program /opt/cray/papi/5.1.2/perf_events/no-cuda/bin/gzip...not found Checking for program /usr/common/graphics/visit/bin/gzip...not found Checking for program /usr/common/usg/cmake/2.8.10.1/bin/gzip...not found Checking for program /opt/cray/atp/1.7.0/bin/gzip...not found Checking for program /opt/cray/switch/1.0-1.0402.45840.2.63.gem/bin/gzip...not found Checking for program /opt/cray/shared-root/1.0-1.0402.46893.3.17.gem/bin/gzip...not found Checking for program /opt/cray/pdsh/2.26-1.0402.45278.1.1.gem/bin/gzip...not found Checking for program /opt/cray/nodehealth/5.1-1.0402.45895.3.76.gem/bin/gzip...not found Checking for program /opt/cray/lbcd/2.1-1.0402.45245.1.2.gem/bin/gzip...not found Checking for program /opt/cray/hosts/1.0-1.0402.45251.1.86.gem/bin/gzip...not found Checking for program /opt/cray/configuration/1.0-1.0402.45284.1.2.gem/bin/gzip...not found Checking for program /opt/cray/ccm/default/sbin/gzip...not found Checking for program /opt/cray/ccm/default/bin/gzip...not found Checking for program /opt/cray/audit/1.0.0-1.0402.45273.1.86.gem/bin/gzip...not found Checking for program /opt/cray/rca/1.0.0-2.0402.47290.7.1.gem/bin/gzip...not found Checking for program /opt/cray/csa/3.0.0-1_2.0402.45268.1.90.gem/sbin/gzip...not found Checking for program /opt/cray/csa/3.0.0-1_2.0402.45268.1.90.gem/bin/gzip...not found Checking for program /opt/cray/job/1.5.5-0.1_2.0402.45272.1.5.gem/bin/gzip...not found Checking for program /opt/cray/xpmem/0.1-2.0402.45248.1.5.gem/bin/gzip...not found Checking for program /opt/cray/dmapp/4.0.1-1.0402.7784.4.1.gem/bin/gzip...not found Checking for program /opt/cray/pmi/4.0.1-1.0000.9753.86.3.gem/bin/gzip...not found Checking for program /opt/cray/ugni/5.0-1.0402.7551.1.10.gem/bin/gzip...not found Checking for program /opt/cray/udreg/2.3.2-1.0402.7546.1.5.gem/bin/gzip...not found Checking for program /opt/gcc/4.8.1/bin/gzip...not found Checking for program /opt/cray/xt-asyncpe/5.23/bin/gzip...not found Checking for program /usr/common/usg/valgrind/3.8.1/bin/gzip...not found Checking for program /global/homes/m/madams/git-fat/gzip...not found Checking for program /opt/moab/7.2.3_notcpretry/bin/gzip...not found Checking for program /opt/moab/7.2.3_notcpretry/sbin/gzip...not found Checking for program /opt/torque/4.2.3.h5_notcpretry/sbin/gzip...not found Checking for program /opt/torque/4.2.3.h5_notcpretry/bin/gzip...not found Checking for program /opt/cray/eslogin/eswrap/1.0.20-1.010102.662.0/bin/gzip...not found Checking for program /opt/modules/3.2.6.7/bin/gzip...not found Checking for program /usr/syscom/nsg/sbin/gzip...not found Checking for program /usr/syscom/nsg/bin/gzip...not found Checking for program /opt/modules/3.2.6.6/bin/gzip...not found Checking for program /usr/lpp/mmfs/bin/gzip...not found Checking for program /usr/local/bin/gzip...not found Checking for program /usr/bin/gzip...found Defined make macro "GZIP" to "/usr/bin/gzip" Defined "HAVE_GZIP" to "1" Defined make macro "PYTHON" to "/usr/bin/python" ================================================================================ TEST configureGit from config.sourceControl(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/sourceControl.py:24) TESTING: configureGit from config.sourceControl(config/BuildSystem/config/sourceControl.py:24) Find the Git executable Checking for program /usr/common/usg/darshan/2.2.6/bin/git...not found Checking for program /scratch/altd/1.0/bin/git...not found Checking for program /usr/common/usg/bin/git...found Defined make macro "GIT" to "git" sh: git --version Executing: git --version sh: git version 1.7.7.4 ================================================================================ TEST configureMercurial from config.sourceControl(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/sourceControl.py:35) TESTING: configureMercurial from config.sourceControl(config/BuildSystem/config/sourceControl.py:35) Find the Mercurial executable Checking for program /usr/common/usg/darshan/2.2.6/bin/hg...not found Checking for program /scratch/altd/1.0/bin/hg...not found Checking for program /usr/common/usg/bin/hg...not found Checking for program /usr/common/mss/bin/hg...not found Checking for program /usr/common/nsg/bin/hg...not found Checking for program /global/common/carver/usg/matlab/R2012a/bin/hg...not found Checking for program /opt/cray/netcdf/4.3.0/bin/hg...not found Checking for program /opt/cray/hdf5/1.8.11/bin/hg...not found Checking for program /usr/common/usg/allineatools/4.2-34404/bin/hg...not found Checking for program /usr/common/usg/ipm/2.00/bin/hg...not found Checking for program /opt/cray/papi/5.1.2/perf_events/no-cuda/bin/hg...not found Checking for program /usr/common/graphics/visit/bin/hg...not found Checking for program /usr/common/usg/cmake/2.8.10.1/bin/hg...not found Checking for program /opt/cray/atp/1.7.0/bin/hg...not found Checking for program /opt/cray/switch/1.0-1.0402.45840.2.63.gem/bin/hg...not found Checking for program /opt/cray/shared-root/1.0-1.0402.46893.3.17.gem/bin/hg...not found Checking for program /opt/cray/pdsh/2.26-1.0402.45278.1.1.gem/bin/hg...not found Checking for program /opt/cray/nodehealth/5.1-1.0402.45895.3.76.gem/bin/hg...not found Checking for program /opt/cray/lbcd/2.1-1.0402.45245.1.2.gem/bin/hg...not found Checking for program /opt/cray/hosts/1.0-1.0402.45251.1.86.gem/bin/hg...not found Checking for program /opt/cray/configuration/1.0-1.0402.45284.1.2.gem/bin/hg...not found Checking for program /opt/cray/ccm/default/sbin/hg...not found Checking for program /opt/cray/ccm/default/bin/hg...not found Checking for program /opt/cray/audit/1.0.0-1.0402.45273.1.86.gem/bin/hg...not found Checking for program /opt/cray/rca/1.0.0-2.0402.47290.7.1.gem/bin/hg...not found Checking for program /opt/cray/csa/3.0.0-1_2.0402.45268.1.90.gem/sbin/hg...not found Checking for program /opt/cray/csa/3.0.0-1_2.0402.45268.1.90.gem/bin/hg...not found Checking for program /opt/cray/job/1.5.5-0.1_2.0402.45272.1.5.gem/bin/hg...not found Checking for program /opt/cray/xpmem/0.1-2.0402.45248.1.5.gem/bin/hg...not found Checking for program /opt/cray/dmapp/4.0.1-1.0402.7784.4.1.gem/bin/hg...not found Checking for program /opt/cray/pmi/4.0.1-1.0000.9753.86.3.gem/bin/hg...not found Checking for program /opt/cray/ugni/5.0-1.0402.7551.1.10.gem/bin/hg...not found Checking for program /opt/cray/udreg/2.3.2-1.0402.7546.1.5.gem/bin/hg...not found Checking for program /opt/gcc/4.8.1/bin/hg...not found Checking for program /opt/cray/xt-asyncpe/5.23/bin/hg...not found Checking for program /usr/common/usg/valgrind/3.8.1/bin/hg...not found Checking for program /global/homes/m/madams/git-fat/hg...not found Checking for program /opt/moab/7.2.3_notcpretry/bin/hg...not found Checking for program /opt/moab/7.2.3_notcpretry/sbin/hg...not found Checking for program /opt/torque/4.2.3.h5_notcpretry/sbin/hg...not found Checking for program /opt/torque/4.2.3.h5_notcpretry/bin/hg...not found Checking for program /opt/cray/eslogin/eswrap/1.0.20-1.010102.662.0/bin/hg...not found Checking for program /opt/modules/3.2.6.7/bin/hg...not found Checking for program /usr/syscom/nsg/sbin/hg...not found Checking for program /usr/syscom/nsg/bin/hg...not found Checking for program /opt/modules/3.2.6.6/bin/hg...not found Checking for program /usr/lpp/mmfs/bin/hg...not found Checking for program /usr/local/bin/hg...not found Checking for program /usr/bin/hg...not found Checking for program /bin/hg...not found Checking for program /usr/bin/X11/hg...not found Checking for program /usr/X11R6/bin/hg...not found Checking for program /usr/games/hg...not found Checking for program /usr/lib64/jvm/jre/bin/hg...not found Checking for program /usr/lib/mit/bin/hg...not found Checking for program /usr/lib/mit/sbin/hg...not found Checking for program /usr/lib/qt3/bin/hg...not found Checking for program /opt/cray/bin/hg...not found Checking for program /global/homes/m/madams/hg...not found ================================================================================ TEST configureCVS from config.sourceControl(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/sourceControl.py:46) TESTING: configureCVS from config.sourceControl(config/BuildSystem/config/sourceControl.py:46) Find the CVS executable Checking for program /usr/common/usg/darshan/2.2.6/bin/cvs...not found Checking for program /scratch/altd/1.0/bin/cvs...not found Checking for program /usr/common/usg/bin/cvs...not found Checking for program /usr/common/mss/bin/cvs...not found Checking for program /usr/common/nsg/bin/cvs...not found Checking for program /global/common/carver/usg/matlab/R2012a/bin/cvs...not found Checking for program /opt/cray/netcdf/4.3.0/bin/cvs...not found Checking for program /opt/cray/hdf5/1.8.11/bin/cvs...not found Checking for program /usr/common/usg/allineatools/4.2-34404/bin/cvs...not found Checking for program /usr/common/usg/ipm/2.00/bin/cvs...not found Checking for program /opt/cray/papi/5.1.2/perf_events/no-cuda/bin/cvs...not found Checking for program /usr/common/graphics/visit/bin/cvs...not found Checking for program /usr/common/usg/cmake/2.8.10.1/bin/cvs...not found Checking for program /opt/cray/atp/1.7.0/bin/cvs...not found Checking for program /opt/cray/switch/1.0-1.0402.45840.2.63.gem/bin/cvs...not found Checking for program /opt/cray/shared-root/1.0-1.0402.46893.3.17.gem/bin/cvs...not found Checking for program /opt/cray/pdsh/2.26-1.0402.45278.1.1.gem/bin/cvs...not found Checking for program /opt/cray/nodehealth/5.1-1.0402.45895.3.76.gem/bin/cvs...not found Checking for program /opt/cray/lbcd/2.1-1.0402.45245.1.2.gem/bin/cvs...not found Checking for program /opt/cray/hosts/1.0-1.0402.45251.1.86.gem/bin/cvs...not found Checking for program /opt/cray/configuration/1.0-1.0402.45284.1.2.gem/bin/cvs...not found Checking for program /opt/cray/ccm/default/sbin/cvs...not found Checking for program /opt/cray/ccm/default/bin/cvs...not found Checking for program /opt/cray/audit/1.0.0-1.0402.45273.1.86.gem/bin/cvs...not found Checking for program /opt/cray/rca/1.0.0-2.0402.47290.7.1.gem/bin/cvs...not found Checking for program /opt/cray/csa/3.0.0-1_2.0402.45268.1.90.gem/sbin/cvs...not found Checking for program /opt/cray/csa/3.0.0-1_2.0402.45268.1.90.gem/bin/cvs...not found Checking for program /opt/cray/job/1.5.5-0.1_2.0402.45272.1.5.gem/bin/cvs...not found Checking for program /opt/cray/xpmem/0.1-2.0402.45248.1.5.gem/bin/cvs...not found Checking for program /opt/cray/dmapp/4.0.1-1.0402.7784.4.1.gem/bin/cvs...not found Checking for program /opt/cray/pmi/4.0.1-1.0000.9753.86.3.gem/bin/cvs...not found Checking for program /opt/cray/ugni/5.0-1.0402.7551.1.10.gem/bin/cvs...not found Checking for program /opt/cray/udreg/2.3.2-1.0402.7546.1.5.gem/bin/cvs...not found Checking for program /opt/gcc/4.8.1/bin/cvs...not found Checking for program /opt/cray/xt-asyncpe/5.23/bin/cvs...not found Checking for program /usr/common/usg/valgrind/3.8.1/bin/cvs...not found Checking for program /global/homes/m/madams/git-fat/cvs...not found Checking for program /opt/moab/7.2.3_notcpretry/bin/cvs...not found Checking for program /opt/moab/7.2.3_notcpretry/sbin/cvs...not found Checking for program /opt/torque/4.2.3.h5_notcpretry/sbin/cvs...not found Checking for program /opt/torque/4.2.3.h5_notcpretry/bin/cvs...not found Checking for program /opt/cray/eslogin/eswrap/1.0.20-1.010102.662.0/bin/cvs...not found Checking for program /opt/modules/3.2.6.7/bin/cvs...not found Checking for program /usr/syscom/nsg/sbin/cvs...not found Checking for program /usr/syscom/nsg/bin/cvs...not found Checking for program /opt/modules/3.2.6.6/bin/cvs...not found Checking for program /usr/lpp/mmfs/bin/cvs...not found Checking for program /usr/local/bin/cvs...not found Checking for program /usr/bin/cvs...found Defined make macro "CVS" to "cvs" sh: cvs --version Executing: cvs --version sh: Concurrent Versions System (CVS) 1.12.12 (client/server) Copyright (C) 2005 Free Software Foundation, Inc. Senior active maintainers include Larry Jones, Derek R. Price, and Mark D. Baushke. Please see the AUTHORS and README files from the CVS distribution kit for a complete list of contributors and copyrights. CVS may be copied only under the terms of the GNU General Public License, a copy of which can be found with the CVS distribution kit. Specify the --help option for further information about CVS ================================================================================ TEST configureSubversion from config.sourceControl(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/sourceControl.py:55) TESTING: configureSubversion from config.sourceControl(config/BuildSystem/config/sourceControl.py:55) Find the Subversion executable Checking for program /usr/common/usg/darshan/2.2.6/bin/svn...not found Checking for program /scratch/altd/1.0/bin/svn...not found Checking for program /usr/common/usg/bin/svn...found Defined make macro "SVN" to "svn" sh: svn --version -q Executing: svn --version -q sh: 1.6.4 ================================================================================ TEST configureDirectories from PETSc.utilities.petscdir(/global/u2/m/madams/petsc_maint/config/PETSc/utilities/petscdir.py:28) TESTING: configureDirectories from PETSc.utilities.petscdir(config/PETSc/utilities/petscdir.py:28) Checks PETSC_DIR and sets if not set Version Information: #define PETSC_VERSION_RELEASE 1 #define PETSC_VERSION_MAJOR 3 #define PETSC_VERSION_MINOR 4 #define PETSC_VERSION_SUBMINOR 4 #define PETSC_VERSION_PATCH 0 #define PETSC_VERSION_DATE "unknown" #define PETSC_VERSION_GIT "unknown" #define PETSC_VERSION_DATE_GIT "unknown" #define PETSC_VERSION_(MAJOR,MINOR,SUBMINOR) \ #define PETSC_VERSION_LT(MAJOR,MINOR,SUBMINOR) \ #define PETSC_VERSION_LE(MAJOR,MINOR,SUBMINOR) \ #define PETSC_VERSION_GT(MAJOR,MINOR,SUBMINOR) \ #define PETSC_VERSION_GE(MAJOR,MINOR,SUBMINOR) \ Defined make macro "DIR" to "/global/homes/m/madams/petsc_maint/" Defined "DIR" to ""/global/homes/m/madams/petsc_maint/"" ================================================================================ TEST configureExternalPackagesDir from PETSc.utilities.petscdir(/global/u2/m/madams/petsc_maint/config/PETSc/utilities/petscdir.py:77) TESTING: configureExternalPackagesDir from PETSc.utilities.petscdir(config/PETSc/utilities/petscdir.py:77) ================================================================================ TEST configureInstallationMethod from PETSc.utilities.petscdir(/global/u2/m/madams/petsc_maint/config/PETSc/utilities/petscdir.py:84) TESTING: configureInstallationMethod from PETSc.utilities.petscdir(config/PETSc/utilities/petscdir.py:84) bin/maint exists. This appears to be a repository clone Defined "VERSION_GIT" to ""feac73e2bb2f3c66a339ba9462db539b05123c17"" Defined "VERSION_DATE_GIT" to ""2014-03-14 14:14:39 -0500"" ================================================================================ TEST getDatafilespath from PETSc.utilities.dataFilesPath(/global/u2/m/madams/petsc_maint/config/PETSc/utilities/dataFilesPath.py:29) TESTING: getDatafilespath from PETSc.utilities.dataFilesPath(config/PETSc/utilities/dataFilesPath.py:29) Checks what DATAFILESPATH should be Defined make macro "DATAFILESPATH" to "None" ================================================================================ TEST configureETags from PETSc.utilities.Etags(/global/u2/m/madams/petsc_maint/config/PETSc/utilities/Etags.py:27) TESTING: configureETags from PETSc.utilities.Etags(config/PETSc/utilities/Etags.py:27) Determine if etags files exist and try to create otherwise Found etags file ================================================================================ TEST printEnvVariables from config.setCompilers(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/setCompilers.py:1504) TESTING: printEnvVariables from config.setCompilers(config/BuildSystem/config/setCompilers.py:1504) **** printenv **** MPIEXEC=aprun CHOMBO_DIR=/global/homes/m/madams/Chombo PELOCAL_PRGENV=true LESS=-M -I PE_HDF5_DIR=/opt/cray/hdf5/1.8.11 IPM_HPM=PAPI_FP_OPS INTEL_PRE_COMPILE_OPTS= -msse3 PATHSCALE_PRE_COMPILE_OPTS= -march=barcelona MODULESHOME=/opt/modules/3.2.6.7 CRAY_HDF5_DIR=/opt/cray/hdf5/1.8.11 CRAYPE_NETWORK_TARGET=gemini CRAY_NETCDF_DIR=/opt/cray/netcdf/4.3.0 USERMODULES=acml:alps:apprentice2:atp:blcr:cce:chapel:cray-fftw:cray-libsci:cray-mpich2:craypat:craype:cray-petsc:cray-petsc-complex:cray-shmem:cray-tpsl:cray-trilinos:cudatoolkit:ddt:fftw:ga:gcc:hdf5:hdf5-parallel:intel:iobuf:java:lgdb:libfast:libsci_acc:mpich1:mrnet:netcdf:netcdf-hdf5parallel:netcdf-nofsync:netcdf-nofsync-hdf5parallel:ntk:onesided:papi:parallel-netcdf:pathscale:perftools:petsc:petsc-complex:pgi:pmi:PrgEnv-cray:PrgEnv-gnu:PrgEnv-intel:PrgEnv-pathscale:PrgEnv-pgi:stat:totalview:tpsl:trilinos:xt-asyncpe:xt-craypat:xt-lgdb:xt-libsci:xt-mpich2:xt-mpt:xt-papi:xt-shmem:xt-totalview:/etc/opt/cray/modules/site_usermodules:/usr/common/nsg/Modules/modulefiles CRAY_LIBSCI_BASE_DIR=/opt/cray/libsci/12.1.01 GCC_PATH=/opt/gcc/4.8.1 CH_OUTPUT_INTERVAL=100000 XKEYSYMDB=/usr/share/X11/XKeysymDB INTEL_MPICH2=130 PAT_RT_HWPC=1 INFOPATH=/opt/gcc/4.8.1/snos/share/info:/usr/local/info:/usr/share/info:/usr/info ALTD_ON=1 GCC_VERSION=4.8.1 BASH_ENV=/global/homes/m/madams/.bashrc GNU_PRE_COMPILE_OPTS= -march=amdfam10 CRAY_MPICH2_ROOTDIR=/opt/cray/mpt/6.0.1 GNU48_LIBSCI=48 IPM_CRAY=-L/usr/common/usg/ipm_cray/2.00/lib -lipm HISTSIZE=1000 CRAY_MPICH2_BASEDIR=/opt/cray/mpt/6.0.1/gni CRAY_SHMEM_VER=6.0.1 CRAY_PMI_INCLUDE_OPTS=-I/opt/cray/pmi/4.0.1-1.0000.9753.86.3.gem/include MANPATH=/usr/common/usg/man:/usr/common/mss/man:/usr/common/nsg/man:/global/common/carver/usg/matlab/R2012a/man:/opt/cray/netcdf/4.3.0/share/man:/opt/cray/papi/5.1.2/perf_events/no-cuda/man:/usr/common/usg/cmake/2.8.10.1/man:/opt/cray/atp/1.7.0/man:/opt/cray/pdsh/2.26-1.0402.45278.1.1.gem/man:/opt/cray/ccm/default/man:/opt/cray/audit/1.0.0-1.0402.45273.1.86.gem/man:/opt/cray/csa/3.0.0-1_2.0402.45268.1.90.gem/man:/opt/cray/job/1.5.5-0.1_2.0402.45272.1.5.gem/man:/opt/cray/libsci/12.1.01/man:/opt/gcc/4.8.1/snos/share/man:/opt/cray/xt-asyncpe/5.23/man:/opt/moab/7.2.3_notcpretry/share/man/:/opt/torque/4.2.3.h5_notcpretry/share/man:/opt/cray/mpt/6.0.1/gni/man/mpich2:/opt/cray/mpt/6.0.1/gni/man/shmem:/opt/cray/eslogin/eswrap/1.0.20-1.010102.662.0/man:/opt/modules/3.2.6.7/man:/usr/syscom/nsg/man:/opt/modules/3.2.6.6/man:/usr/share/man:ignore:/cm/local/apps/environment-modules/3.2.6/man SVN_EDITOR=vi PROFILEREAD=true DMAPP_ABORT_ON_ERROR=1 ALTD_SELECT_USERS= NETCDF_DIR=/opt/cray/netcdf/4.3.0/GNU/48 CRAY_DARSHAN_DIR=/usr/common/usg/darshan/2.2.6 PYTHONPATH=/scratch/altd/lib64/python2.6/site-packages LIBSCI_BASE_DIR=/opt/cray/libsci/12.1.01 MPICH_ABORT_ON_ERROR=1 PE_ENV=GNU PE_PRODUCT_LIST=DARSHAN:CRAY_HDF5:CRAY_NETCDF:ATP:XE_SYSROOT:CRAY_RCA:CRAY_XPMEM:CRAY_DMAPP:CRAY_PMI:CRAY_UGNI:CRAY_UDREG:CRAY_LIBSCI:ASYNCPE:GNU:GCC:CRAY_MPICH2:CRAY_SHMEM:CRAYPE_MC12:PAPI VALGRIND_LIB=/usr/common/usg/valgrind/3.8.1/lib/valgrind DDT_LINK_DMALLOC=-L/usr/common/usg/allineatools/4.2-34404/lib/64 -ldmalloc TARGETMODULES=craype-abudhabi:craype-abudhabi-cu:craype-accel-nvidia20:craype-accel-nvidia30:craype-accel-nvidia35:craype-barcelona:craype-hugepages128K:craype-hugepages128M:craype-hugepages16M:craype-hugepages256M:craype-hugepages2M:craype-hugepages512K:craype-hugepages512M:craype-hugepages64M:craype-hugepages8M:craype-interlagos:craype-interlagos-cu:craype-istanbul:craype-ivybridge:craype-knc:craype-mc12:craype-mc8:craype-network-aries:craype-network-gemini:craype-network-seastar:craype-sandybridge:craype-shanghai:craype-target-compute_node:craype-target-local_host:craype-target-native:craype-target-petest:craype-xeon:xtpe-barcelona:xtpe-interlagos:xtpe-interlagos-cu:xtpe-istanbul:xtpe-mc12:xtpe-mc8:xtpe-network-gemini:xtpe-network-seastar:xtpe-shanghai:xtpe-target-native:xtpe-xeon:/etc/opt/cray/modules/site_targetmodules DDT_LINK_DMALLOCTH=-L/usr/common/usg/allineatools/4.2-34404/lib/64 -ldmallocth SSH_CONNECTION=128.55.69.68 40668 128.55.68.100 22 PGI_MPICH2=121 HOSTNAME=hopper09 MOABHOMEDIR=/usr/syscom/nsg/var/spool/moab MPICH_GNI_MBOX_PLACEMENT=preferred PETSC_ARCH=arch-xe6-opt64 ALLINEA_TOOLS_CONFIG_DIR=/global/homes/m/madams/.allinea/hopper CRAY_RCA_POST_LINK_OPTS=-L/opt/cray/rca/1.0.0-2.0402.47290.7.1.gem/lib64 -lrca MAIL=/var/mail/madams LS_COLORS=no=00:fi=00:di=01;34:ln=00;36:pi=40;33:so=01;35:do=01;35:bd=40;33;01:cd=40;33;01:or=41;33;01:ex=00;32:*.cmd=00;32:*.exe=01;32:*.com=01;32:*.bat=01;32:*.btm=01;32:*.dll=01;32:*.tar=00;31:*.tbz=00;31:*.tgz=00;31:*.rpm=00;31:*.deb=00;31:*.arj=00;31:*.taz=00;31:*.lzh=00;31:*.lzma=00;31:*.zip=00;31:*.zoo=00;31:*.z=00;31:*.Z=00;31:*.gz=00;31:*.bz2=00;31:*.tb2=00;31:*.tz2=00;31:*.tbz2=00;31:*.avi=01;35:*.bmp=01;35:*.fli=01;35:*.gif=01;35:*.jpg=01;35:*.jpeg=01;35:*.mng=01;35:*.mov=01;35:*.mpg=01;35:*.pcx=01;35:*.pbm=01;35:*.pgm=01;35:*.png=01;35:*.ppm=01;35:*.tga=01;35:*.tif=01;35:*.xbm=01;35:*.xpm=01;35:*.dl=01;35:*.gl=01;35:*.wmv=01;35:*.aiff=00;32:*.au=00;32:*.mid=00;32:*.mp3=00;32:*.ogg=00;32:*.voc=00;32:*.wav=00;32: MPICH_MPIIO_DVS_MAXNODES=14 ALLINEA_TOOLS_DOCDIR=/usr/common/usg/allineatools/4.2-34404/doc PAPI_VERSION=5.1.2 MINICOM=-c on CSHEDIT=emacs module=() { eval `/opt/modules/3.2.6.7/bin/modulecmd bash $*` } LESSOPEN=lessopen.sh %s ESWRAP_LOGIN=hmom01 MACHTYPE=x86_64-suse-linux CRAY_UDREG_INCLUDE_OPTS=-I/opt/cray/udreg/2.3.2-1.0402.7546.1.5.gem/include USER=madams INPUTRC=/etc/inputrc HOME=/global/homes/m/madams MODULE_VERSION_STACK=3.2.6.7 PAPI_INCLUDE_OPTS= -I/opt/cray/papi/5.1.2/perf_events/no-cuda/include NERSC_HOST=hopper DDT_MPIRUN=/usr/bin/aprun SHLVL=1 CRAY_UGNI_INCLUDE_OPTS=-I/opt/cray/ugni/5.0-1.0402.7551.1.10.gem/include CPU=x86_64 CRAY_XPMEM_POST_LINK_OPTS=-L/opt/cray/xpmem/0.1-2.0402.45248.1.5.gem/lib64 CRAY_LIBSCI_DIR=/opt/cray/libsci/12.1.01 PETSC_DIR=/global/homes/m/madams/petsc_private LIBRARYMODULES=acml:alps:apprentice2:atp:cray-fftw:cray-libsci:cray-mpich2:cray-petsc:cray-petsc-complex:cray-shmem:cray-tpsl:cray-trilinos:cudatoolkit:fftw:ga:hdf5:hdf5-parallel:iobuf:lgdb:libfast:libsci_acc:mpich1:mpich2:mrnet:netcdf:netcdf-hdf5parallel:netcdf-nofsync:netcdf-nofsync-hdf5parallel:ntk:onesided:papi:parallel-netcdf:petsc:petsc-complex:pmi:shmem:tpsl:trilinos:xt-atp:xt-lgdb:xt-libsci:xt-mpt:xt-papi:/etc/opt/cray/modules/site_librarymodules PGI_HDF5=121 CRAY_MPICH2=81 GSCRATCH=/global/scratch2/sd/madams IPM_KEYFILE=/usr/common/usg/ipm/2.00/etc/ipm_key_mpi JAVA_BINDIR=/usr/lib64/jvm/jre/bin NSG_HOME=/usr/syscom/nsg ALTD_SELECT_ON=0 XTPE_NETWORK_TARGET=gemini SYSROOT_DIR=/opt/cray/xe-sysroot/4.2.34 SHELL=/bin/bash HDF5_INCLUDE_OPTS=/opt/cray/hdf5/1.8.11/GNU/48/include PKG_CONFIG_PATH=/opt/cray/switch/1.0-1.0402.45840.2.63.gem/lib64/pkgconfig:/opt/cray/shared-root/1.0-1.0402.46893.3.17.gem/lib64/pkgconfig:/opt/cray/nodehealth/5.1-1.0402.45895.3.76.gem/lib64/pkgconfig:/opt/cray/hosts/1.0-1.0402.45251.1.86.gem/lib64/pkgconfig:/opt/cray/configuration/1.0-1.0402.45284.1.2.gem/lib64/pkgconfig:/opt/cray/rca/1.0.0-2.0402.47290.7.1.gem/lib64/pkgconfig:/opt/cray/xpmem/0.1-2.0402.45248.1.5.gem/lib64/pkgconfig:/opt/cray/gni-headers/2.1-1.0402.7541.1.5.gem/lib64/pkgconfig:/opt/cray/dmapp/4.0.1-1.0402.7784.4.1.gem/lib64/pkgconfig:/opt/cray/pmi/4.0.1-1.0000.9753.86.3.gem/lib64/pkgconfig:/opt/cray/ugni/5.0-1.0402.7551.1.10.gem/lib64/pkgconfig:/opt/cray/udreg/2.3.2-1.0402.7546.1.5.gem/lib64/pkgconfig LS_OPTIONS=-N --color=tty -T 0 XNLSPATH=/usr/share/X11/nls TMPDIR=/scratch/scratchdirs/madams CRAY_HDF5_VERSION=1.8.11 ALTD_VERBOSE=0 PAPI_POST_LINK_OPTS= -L/opt/cray/papi/5.1.2/perf_events/no-cuda/lib -lpapi ALT_LINKER=/scratch/altd/1.0/bin/ld XDG_CONFIG_DIRS=/etc/xdg MAN_POSIXLY_CORRECT=1 WINDOWMANAGER=/usr/bin/gnome XDG_DATA_DIRS=/usr/share:/etc/opt/kde3/share:/opt/kde3/share CRAY_SHMEM_ROOTDIR=/opt/cray/mpt/6.0.1 TOOLMODULES=apprentice:apprentice2:atp:chapel:craypat:ddt:gdb:iobuf:mrnet:papi:perftools:stat:totalview:xt-craypat:xt-lgdb:xt-papi:xt-totalview:/etc/opt/cray/modules/site_toolmodules COLORTERM=1 DDT_LINK_DMALLOCTHCXX=-L/usr/common/usg/allineatools/4.2-34404/lib/64 -ldmallocthcxx CRAY_DMAPP_INCLUDE_OPTS=-I/opt/cray/dmapp/4.0.1-1.0402.7784.4.1.gem/include -I/opt/cray/gni-headers/2.1-1.0402.7541.1.5.gem/include PAGER=less FORT_BUFFERED=yes IPM_INTEL=-L/usr/common/usg/ipm_intel/2.00/lib -lipm MODULE_VERSION=3.2.6.7 ENV=/etc/bash.bashrc LIBSCI_VERSION=12.1.01 HDF5_DIR=/opt/cray/hdf5/1.8.11/GNU/48 CRAY_PMI_POST_LINK_OPTS=-L/opt/cray/pmi/4.0.1-1.0000.9753.86.3.gem/lib64 PGI_NETCDF=121 QT_SYSTEM_DIR=/usr/share/desktop-data ATP_MRNET_COMM_PATH=/opt/cray/atp/1.7.0/bin/atp_mrnet_commnode_wrapper CRAY_MPICH2_VER=6.0.1 QTDIR=/usr/lib/qt3 LD_LIBRARY_PATH=/opt/cray/papi/5.1.2/perf_events/no-cuda/lib:/opt/cray/shared-root/1.0-1.0402.46893.3.17.gem/lib64:/opt/cray/nodehealth/5.1-1.0402.45895.3.76.gem/lib64:/opt/cray/csa/3.0.0-1_2.0402.45268.1.90.gem/lib64:/opt/cray/job/1.5.5-0.1_2.0402.45272.1.5.gem/lib64:/opt/gcc/mpc/0.8.1/lib:/opt/gcc/mpfr/2.4.2/lib:/opt/gcc/gmp/4.3.2/lib:/opt/gcc/4.8.1/snos/lib64:/usr/syscom/nsg/lib CRAY_LIBSCI_PREFIX_DIR=/opt/cray/libsci/12.1.01/GNU/48/mc12 LANG=en_US.UTF-8 JAVA_ROOT=/usr/lib64/jvm/jre PAPI_INTERFACE=perf_events MAP_MPIRUN=/usr/bin/aprun ASYNCPE_DIR=/opt/cray/xt-asyncpe/5.23 G_BROKEN_FILENAMES=1 DVS_MAXNODES=1__ FFTW_SYSTEM_WISDOM_DIR=/opt/cray/libsci/12.1.01 MATLAB=/global/common/carver/usg/matlab/R2012a OSTYPE=linux LESS_ADVANCED_PREPROCESSOR=no MODULEPATH=/opt/cray/gem/modulefiles:/opt/cray/xt-asyncpe/default/modulefiles:/opt/cray/modulefiles:/opt/modulefiles:/usr/common/usg/Modules/modulefiles:/usr/syscom/nsg/modulefiles:/usr/syscom/nsg/opt/modulefiles:/usr/common/acts/Modules/modulefiles:/usr/common/ftg/Modules/modulefiles:/usr/common/graphics/Modules/modulefiles:/usr/common/jgi/Modules/modulefiles:/usr/common/tig/Modules/modulefiles DDT_NO_TIMEOUT=1 LIBSCIFFT=-ldarshan-mpi-io CRAY_CPU_TARGET=mc12 IPM_GNU=-L/usr/common/usg/ipm_gnu/2.00/lib -lipm NNTPSERVER=news ALTD_PATH=/scratch/altd/1.0 CRAY_UGNI_POST_LINK_OPTS=-L/opt/cray/ugni/5.0-1.0402.7551.1.10.gem/lib64 CRAY_NETCDF_VERSION=4.3.0 HOST=hopper09 IPM_LOGDIR=/project/projectdirs/ipm/log/hopper CRAY_SHMEM_DIR=/opt/cray/mpt/6.0.1/gni/sma BUILD_OPTS=/opt/cray/xt-asyncpe/5.23/bin/build-opts DDT_LINK_DMALLOCXX=-L/usr/common/usg/allineatools/4.2-34404/lib/64 -ldmallocxx CRAY_LIBSCI_VERSION=12.1.01 FROM_HEADER=nersc.gov LESSCLOSE=lessclose.sh %s %s SSH_TTY=/dev/pts/10 CRAY_RCA_INCLUDE_OPTS=-I/opt/cray/rca/1.0.0-2.0402.47290.7.1.gem/include -I/opt/cray-hss-devel/7.1.0/include -I/opt/cray/krca/1.0.0-2.0402.46083.4.47.gem/include SCRATCH2=/scratch2/scratchdirs/madams CVS_RSH=ssh GNU47_LIBSCI=47 DISPLAY=hopper09:15.0 JRE_HOME=/usr/lib64/jvm/jre MORE=-sl _=../arch-xe6-opt64.py CRAY_LIBSCI=81 MATLAB_SET_FONT=hopper09:15.0 GNU_VERSION=4.8.1 INTEL_LIBSCI=130 INTEL_NETCDF=130 HOSTTYPE=x86_64 CH_TIMER=FALSE LIBGL_ALWAYS_INDIRECT=1 SSH_CLIENT=128.55.69.68 40668 22 LOGNAME=madams CRAY_PRGENVGNU=loaded PATH=/usr/common/usg/darshan/2.2.6/bin:/scratch/altd/1.0/bin:/usr/common/usg/bin:/usr/common/mss/bin:/usr/common/nsg/bin:/global/common/carver/usg/matlab/R2012a/bin:/opt/cray/netcdf/4.3.0/bin:/opt/cray/hdf5/1.8.11/bin:/usr/common/usg/allineatools/4.2-34404/bin:/usr/common/usg/ipm/2.00/bin:/opt/cray/papi/5.1.2/perf_events/no-cuda/bin:/usr/common/graphics/visit/bin:/usr/common/usg/cmake/2.8.10.1/bin:/opt/cray/atp/1.7.0/bin:/opt/cray/switch/1.0-1.0402.45840.2.63.gem/bin:/opt/cray/shared-root/1.0-1.0402.46893.3.17.gem/bin:/opt/cray/pdsh/2.26-1.0402.45278.1.1.gem/bin:/opt/cray/nodehealth/5.1-1.0402.45895.3.76.gem/bin:/opt/cray/lbcd/2.1-1.0402.45245.1.2.gem/bin:/opt/cray/hosts/1.0-1.0402.45251.1.86.gem/bin:/opt/cray/configuration/1.0-1.0402.45284.1.2.gem/bin:/opt/cray/ccm/default/sbin:/opt/cray/ccm/default/bin:/opt/cray/audit/1.0.0-1.0402.45273.1.86.gem/bin:/opt/cray/rca/1.0.0-2.0402.47290.7.1.gem/bin:/opt/cray/csa/3.0.0-1_2.0402.45268.1.90.gem/sbin:/opt/cray/csa/3.0.0-1_2.0402.45268.1.90.gem/bin:/opt/cray/job/1.5.5-0.1_2.0402.45272.1.5.gem/bin:/opt/cray/xpmem/0.1-2.0402.45248.1.5.gem/bin:/opt/cray/dmapp/4.0.1-1.0402.7784.4.1.gem/bin:/opt/cray/pmi/4.0.1-1.0000.9753.86.3.gem/bin:/opt/cray/ugni/5.0-1.0402.7551.1.10.gem/bin:/opt/cray/udreg/2.3.2-1.0402.7546.1.5.gem/bin:/opt/gcc/4.8.1/bin:/opt/cray/xt-asyncpe/5.23/bin:/usr/common/usg/valgrind/3.8.1/bin:/global/homes/m/madams/git-fat:/opt/moab/7.2.3_notcpretry/bin:/opt/moab/7.2.3_notcpretry/sbin:/opt/torque/4.2.3.h5_notcpretry/sbin:/opt/torque/4.2.3.h5_notcpretry/bin:/opt/cray/eslogin/eswrap/1.0.20-1.010102.662.0/bin:/opt/modules/3.2.6.7/bin:/usr/syscom/nsg/sbin:/usr/syscom/nsg/bin:/opt/modules/3.2.6.6/bin:/usr/lpp/mmfs/bin:/usr/local/bin:/usr/bin:/bin:/usr/bin/X11:/usr/X11R6/bin:/usr/games:/usr/lib64/jvm/jre/bin:/usr/lib/mit/bin:/usr/lib/mit/sbin:/usr/lib/qt3/bin:/opt/cray/bin ATP_HOME=/opt/cray/atp/1.7.0 IPM=-L/usr/common/usg/ipm/2.00/lib -lipm ASYNCPE_VERSION=5.23 TERM=xterm CRAY_XPMEM_INCLUDE_OPTS=-I/opt/cray/xpmem/0.1-2.0402.45248.1.5.gem/include JAVA_HOME=/usr/lib64/jvm/jre ALTD_WORKDIR=/scratch/altd/logs CRAY_MPICH2_DIR=/opt/cray/mpt/6.0.1/gni/mpich2-pgi/121 _LMFILES_=/opt/modulefiles/modules/3.2.6.6:/usr/syscom/nsg/modulefiles/nsg/1.2.0:/opt/modulefiles/modules/3.2.6.7:/opt/cray/xt-asyncpe/default/modulefiles/xtpe-network-gemini:/opt/modulefiles/PrgEnv-gnu/4.2.34:/opt/cray/modulefiles/atp/1.7.0:/opt/modulefiles/xe-sysroot/4.2.34:/opt/cray/gem/modulefiles/switch/1.0-1.0402.45840.2.63.gem:/opt/cray/gem/modulefiles/shared-root/1.0-1.0402.46893.3.17.gem:/opt/cray/gem/modulefiles/pdsh/2.26-1.0402.45278.1.1.gem:/opt/cray/gem/modulefiles/nodehealth/5.1-1.0402.45895.3.76.gem:/opt/cray/gem/modulefiles/lbcd/2.1-1.0402.45245.1.2.gem:/opt/cray/gem/modulefiles/hosts/1.0-1.0402.45251.1.86.gem:/opt/cray/gem/modulefiles/configuration/1.0-1.0402.45284.1.2.gem:/opt/cray/modulefiles/ccm/2.2.0-1.0402.46086.4.120:/opt/cray/gem/modulefiles/audit/1.0.0-1.0402.45273.1.86.gem:/opt/cray/gem/modulefiles/rca/1.0.0-2.0402.47290.7.1.gem:/opt/cray/gem/modulefiles/csa/3.0.0-1_2.0402.45268.1.90.gem:/opt/cray/gem/modulefiles/job/1.5.5-0.1_2.0402.45272.1.5.gem:/opt/cray/gem/modulefiles/xpmem/0.1-2.0402.45248.1.5.gem:/opt/cray/gem/modulefiles/gni-headers/2.1-1.0402.7541.1.5.gem:/opt/cray/gem/modulefiles/dmapp/4.0.1-1.0402.7784.4.1.gem:/opt/cray/gem/modulefiles/pmi/4.0.1-1.0000.9753.86.3.gem:/opt/cray/gem/modulefiles/ugni/5.0-1.0402.7551.1.10.gem:/opt/cray/gem/modulefiles/udreg/2.3.2-1.0402.7546.1.5.gem:/opt/cray/modulefiles/cray-libsci/12.1.01:/opt/modulefiles/gcc/4.8.1:/opt/modulefiles/xt-asyncpe/5.23:/opt/modulefiles/eswrap/1.0.20-1.010102.662.0:/opt/cray/xt-asyncpe/default/modulefiles/craype-mc12:/opt/cray/modulefiles/cray-shmem/6.0.1:/opt/cray/modulefiles/cray-mpich/6.0.1:/opt/modulefiles/torque/4.2.3.h5_notcpretry:/opt/modulefiles/moab/7.2.3-r19-b121-SUSE11:/usr/common/usg/Modules/modulefiles/valgrind/3.8.1:/usr/common/usg/Modules/modulefiles/cmake/2.8.10.1:/usr/common/graphics/Modules/modulefiles/visit/2.7.0:/opt/cray/modulefiles/papi/5.1.2:/usr/common/usg/Modules/modulefiles/ipm/2.00:/usr/common/usg/Modules/modulefiles/allineatools/4.2-34404:/opt/cray/modulefiles/cray-hdf5/1.8.11:/opt/cray/modulefiles/cray-netcdf/4.3.0:/usr/common/usg/Modules/modulefiles/matlab/R2012a:/usr/common/usg/Modules/modulefiles/altd/1.0:/usr/common/usg/Modules/modulefiles/darshan/2.2.6:/usr/common/usg/Modules/modulefiles/usg-default-modules/1.0 CRAY_DMAPP_POST_LINK_OPTS=-L/opt/cray/dmapp/4.0.1-1.0402.7784.4.1.gem/lib64 CRAY_GNI_HEADERS_INCLUDE_OPTS=-I/opt/cray/gni-headers/2.1-1.0402.7541.1.5.gem/include CRAY_PRE_COMPILE_OPTS=-hnetwork=gemini CRAY_DARSHAN_VERSION=2.2.6 CRAY_SHMEM_BASEDIR=/opt/cray/mpt/6.0.1/gni ATP_POST_LINK_OPTS=-Wl,-L/opt/cray/atp/1.7.0/lib/ -Wl,--undefined=_ATP_Data_Globals -Wl,--undefined=__atpHandlerInstall -Wl,-lAtpSigHCommData -Wl,-lAtpSigHandler INFODIR=/usr/local/info:/usr/share/info:/usr/info MPICH_DIR=/opt/cray/mpt/6.0.1/gni/mpich2-pgi/121 ALLINEA_TOOLS_VERSION=4.2-34404 SYSROOT_GCC_VER=4.3.4 CRAY_SITE_LIST_DIR=/etc/opt/cray/modules LESSKEY=/etc/lesskey.bin RCLOCAL_PRGENV=true INTEL_HDF5=130 XCURSOR_THEME=DMZ GSCRATCH2=/global/scratch2/sd/madams G_FILENAME_ENCODING=@locale,UTF-8,ISO-8859-15,CP1252 PAPI_INTERFACE_VERSION=no-cuda DARSHAN_POST_LINK_OPTS= -L/usr/common/usg/darshan/2.2.6/lib -ldarshan-mpi-io -lz -Wl,-u,__wrap_fopen,-u,MPI_Init,-u,MPI_Wtime,-wrap,write,-wrap,open,-wrap,creat,-wrap,creat64,-wrap,open64,-wrap,close,-wrap,read,-wrap,lseek,-wrap,lseek64,-wrap,pread,-wrap,pwrite,-wrap,readv,-wrap,writev,-wrap,__xstat,-wrap,__lxstat,-wrap,__fxstat,-wrap,__xstat64,-wrap,__lxstat64,-wrap,__fxstat64,-wrap,mmap,-wrap,mmap64,-wrap,fopen,-wrap,fclose,-wrap,fread,-wrap,fwrite,-wrap,fseek,-wrap,fopen64,-wrap,pread64,-wrap,pwrite64,-wrap,fsync,-wrap,fdatasync,-wrap,ncmpi_create,-wrap,ncmpi_open,-wrap,ncmpi_close,-wrap,H5Fcreate,-wrap,H5Fopen,-wrap,H5Fclose -lfmpich -lmpichcxx -ldarshan-posix -ldarshan-mpi-io -lz PYTHONSTARTUP=/etc/pythonstart SCRATCH=/scratch/scratchdirs/madams OLDPWD=/global/homes/m/madams LOADEDMODULES=modules/3.2.6.6:nsg/1.2.0:modules/3.2.6.7:xtpe-network-gemini:PrgEnv-gnu/4.2.34:atp/1.7.0:xe-sysroot/4.2.34:switch/1.0-1.0402.45840.2.63.gem:shared-root/1.0-1.0402.46893.3.17.gem:pdsh/2.26-1.0402.45278.1.1.gem:nodehealth/5.1-1.0402.45895.3.76.gem:lbcd/2.1-1.0402.45245.1.2.gem:hosts/1.0-1.0402.45251.1.86.gem:configuration/1.0-1.0402.45284.1.2.gem:ccm/2.2.0-1.0402.46086.4.120:audit/1.0.0-1.0402.45273.1.86.gem:rca/1.0.0-2.0402.47290.7.1.gem:csa/3.0.0-1_2.0402.45268.1.90.gem:job/1.5.5-0.1_2.0402.45272.1.5.gem:xpmem/0.1-2.0402.45248.1.5.gem:gni-headers/2.1-1.0402.7541.1.5.gem:dmapp/4.0.1-1.0402.7784.4.1.gem:pmi/4.0.1-1.0000.9753.86.3.gem:ugni/5.0-1.0402.7551.1.10.gem:udreg/2.3.2-1.0402.7546.1.5.gem:cray-libsci/12.1.01:gcc/4.8.1:xt-asyncpe/5.23:eswrap/1.0.20-1.010102.662.0:craype-mc12:cray-shmem/6.0.1:cray-mpich/6.0.1:torque/4.2.3.h5_notcpretry:moab/7.2.3-r19-b121-SUSE11:valgrind/3.8.1:cmake/2.8.10.1:visit/2.7.0:papi/5.1.2:ipm/2.00:allineatools/4.2-34404:cray-hdf5/1.8.11:cray-netcdf/4.3.0:matlab/R2012a:altd/1.0:darshan/2.2.6:usg-default-modules/1.0 ALTD_SELECT_OFF_USERS= SHMEM_ABORT_ON_ERROR=1 PWD=/global/homes/m/madams/petsc_maint PGI_LIBSCI=121 ALLINEA_TOOLS_DIR=/usr/common/usg/allineatools/4.2-34404/.. CRAY_UDREG_POST_LINK_OPTS=-L/opt/cray/udreg/2.3.2-1.0402.7546.1.5.gem/lib64 CRAY_LD_LIBRARY_PATH=/usr/common/usg/darshan/2.2.6/lib:/opt/cray/netcdf/4.3.0/GNU/48/lib:/opt/cray/hdf5/1.8.11/GNU/48/lib:/opt/cray/rca/1.0.0-2.0402.47290.7.1.gem/lib64:/opt/cray/xpmem/0.1-2.0402.45248.1.5.gem/lib64:/opt/cray/dmapp/4.0.1-1.0402.7784.4.1.gem/lib64:/opt/cray/pmi/4.0.1-1.0000.9753.86.3.gem/lib64:/opt/cray/ugni/5.0-1.0402.7551.1.10.gem/lib64:/opt/cray/udreg/2.3.2-1.0402.7546.1.5.gem/lib64:/opt/cray/libsci/12.1.01/GNU/48/mc12/lib:/opt/cray/mpt/6.0.1/gni/mpich2-pgi/121/lib:/opt/cray/mpt/6.0.1/gni/sma/lib64:/opt/cray/mpt/6.0.1/gni/sma64/lib64:/opt/cray/libsci/12.1.01/PGI/121/x86_64/lib XTOS_VERSION=4.2.34 PRGENVMODULES=PrgEnv-cray:PrgEnv-gnu:PrgEnv-intel:PrgEnv-pathscale:PrgEnv-pgi ================================================================================ TEST resetEnvCompilers from config.setCompilers(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/setCompilers.py:1511) TESTING: resetEnvCompilers from config.setCompilers(config/BuildSystem/config/setCompilers.py:1511) ================================================================================ TEST checkMPICompilerOverride from config.setCompilers(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/setCompilers.py:1476) TESTING: checkMPICompilerOverride from config.setCompilers(config/BuildSystem/config/setCompilers.py:1476) Check if --with-mpi-dir is used along with CC CXX or FC compiler options. This usually prevents mpi compilers from being used - so issue a warning ================================================================================ TEST requireMpiLdPath from config.setCompilers(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/setCompilers.py:1495) TESTING: requireMpiLdPath from config.setCompilers(config/BuildSystem/config/setCompilers.py:1495) OpenMPI wrappers require LD_LIBRARY_PATH set ================================================================================ TEST checkVendor from config.setCompilers(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/setCompilers.py:399) TESTING: checkVendor from config.setCompilers(config/BuildSystem/config/setCompilers.py:399) Determine the compiler vendor Compiler vendor is "" ================================================================================ TEST checkInitialFlags from config.setCompilers(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/setCompilers.py:409) TESTING: checkInitialFlags from config.setCompilers(config/BuildSystem/config/setCompilers.py:409) Initialize the compiler and linker flags Pushing language C Initialized CFLAGS to Initialized CFLAGS to Initialized LDFLAGS to Popping language C Pushing language CUDA Initialized CUDAFLAGS to Initialized CUDAFLAGS to Initialized LDFLAGS to Popping language CUDA Pushing language Cxx Initialized CXXFLAGS to Initialized CXX_CXXFLAGS to Initialized LDFLAGS to Popping language Cxx Pushing language FC Initialized FFLAGS to Initialized FFLAGS to Initialized LDFLAGS to Popping language FC Initialized CPPFLAGS to Initialized CUDAPPFLAGS to Initialized CXXCPPFLAGS to Initialized CC_LINKER_FLAGS to [] Initialized CXX_LINKER_FLAGS to [] Initialized FC_LINKER_FLAGS to [] Initialized CUDAC_LINKER_FLAGS to [] Initialized sharedLibraryFlags to [] Initialized dynamicLibraryFlags to [] ================================================================================ TEST checkCCompiler from config.setCompilers(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/setCompilers.py:525) TESTING: checkCCompiler from config.setCompilers(config/BuildSystem/config/setCompilers.py:525) Locate a functional C compiler Checking for program /usr/common/usg/darshan/2.2.6/bin/cc...not found Checking for program /scratch/altd/1.0/bin/cc...not found Checking for program /usr/common/usg/bin/cc...not found Checking for program /usr/common/mss/bin/cc...not found Checking for program /usr/common/nsg/bin/cc...not found Checking for program /global/common/carver/usg/matlab/R2012a/bin/cc...not found Checking for program /opt/cray/netcdf/4.3.0/bin/cc...not found Checking for program /opt/cray/hdf5/1.8.11/bin/cc...not found Checking for program /usr/common/usg/allineatools/4.2-34404/bin/cc...not found Checking for program /usr/common/usg/ipm/2.00/bin/cc...not found Checking for program /opt/cray/papi/5.1.2/perf_events/no-cuda/bin/cc...not found Checking for program /usr/common/graphics/visit/bin/cc...not found Checking for program /usr/common/usg/cmake/2.8.10.1/bin/cc...not found Checking for program /opt/cray/atp/1.7.0/bin/cc...not found Checking for program /opt/cray/switch/1.0-1.0402.45840.2.63.gem/bin/cc...not found Checking for program /opt/cray/shared-root/1.0-1.0402.46893.3.17.gem/bin/cc...not found Checking for program /opt/cray/pdsh/2.26-1.0402.45278.1.1.gem/bin/cc...not found Checking for program /opt/cray/nodehealth/5.1-1.0402.45895.3.76.gem/bin/cc...not found Checking for program /opt/cray/lbcd/2.1-1.0402.45245.1.2.gem/bin/cc...not found Checking for program /opt/cray/hosts/1.0-1.0402.45251.1.86.gem/bin/cc...not found Checking for program /opt/cray/configuration/1.0-1.0402.45284.1.2.gem/bin/cc...not found Checking for program /opt/cray/ccm/default/sbin/cc...not found Checking for program /opt/cray/ccm/default/bin/cc...not found Checking for program /opt/cray/audit/1.0.0-1.0402.45273.1.86.gem/bin/cc...not found Checking for program /opt/cray/rca/1.0.0-2.0402.47290.7.1.gem/bin/cc...not found Checking for program /opt/cray/csa/3.0.0-1_2.0402.45268.1.90.gem/sbin/cc...not found Checking for program /opt/cray/csa/3.0.0-1_2.0402.45268.1.90.gem/bin/cc...not found Checking for program /opt/cray/job/1.5.5-0.1_2.0402.45272.1.5.gem/bin/cc...not found Checking for program /opt/cray/xpmem/0.1-2.0402.45248.1.5.gem/bin/cc...not found Checking for program /opt/cray/dmapp/4.0.1-1.0402.7784.4.1.gem/bin/cc...not found Checking for program /opt/cray/pmi/4.0.1-1.0000.9753.86.3.gem/bin/cc...not found Checking for program /opt/cray/ugni/5.0-1.0402.7551.1.10.gem/bin/cc...not found Checking for program /opt/cray/udreg/2.3.2-1.0402.7546.1.5.gem/bin/cc...not found Checking for program /opt/gcc/4.8.1/bin/cc...not found Checking for program /opt/cray/xt-asyncpe/5.23/bin/cc...found Defined make macro "CC" to "cc" Pushing language C All intermediate test results are stored in /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language C Popping language C Pushing language CUDA Popping language CUDA Pushing language Cxx Popping language Cxx Pushing language FC Popping language FC Pushing language C Popping language C sh: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o Executing: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded output: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Pushing language C Popping language C in cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language C Popping language C sh: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o Executing: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded output: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Pushing language C Popping language C in cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Executing: /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest sh: /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest Executing: /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest sh: Popping language C ================================================================================ TEST checkCPreprocessor from config.setCompilers(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/setCompilers.py:560) TESTING: checkCPreprocessor from config.setCompilers(config/BuildSystem/config/setCompilers.py:560) Locate a functional C preprocessor Checking for program /usr/common/usg/darshan/2.2.6/bin/cc...not found Checking for program /scratch/altd/1.0/bin/cc...not found Checking for program /usr/common/usg/bin/cc...not found Checking for program /usr/common/mss/bin/cc...not found Checking for program /usr/common/nsg/bin/cc...not found Checking for program /global/common/carver/usg/matlab/R2012a/bin/cc...not found Checking for program /opt/cray/netcdf/4.3.0/bin/cc...not found Checking for program /opt/cray/hdf5/1.8.11/bin/cc...not found Checking for program /usr/common/usg/allineatools/4.2-34404/bin/cc...not found Checking for program /usr/common/usg/ipm/2.00/bin/cc...not found Checking for program /opt/cray/papi/5.1.2/perf_events/no-cuda/bin/cc...not found Checking for program /usr/common/graphics/visit/bin/cc...not found Checking for program /usr/common/usg/cmake/2.8.10.1/bin/cc...not found Checking for program /opt/cray/atp/1.7.0/bin/cc...not found Checking for program /opt/cray/switch/1.0-1.0402.45840.2.63.gem/bin/cc...not found Checking for program /opt/cray/shared-root/1.0-1.0402.46893.3.17.gem/bin/cc...not found Checking for program /opt/cray/pdsh/2.26-1.0402.45278.1.1.gem/bin/cc...not found Checking for program /opt/cray/nodehealth/5.1-1.0402.45895.3.76.gem/bin/cc...not found Checking for program /opt/cray/lbcd/2.1-1.0402.45245.1.2.gem/bin/cc...not found Checking for program /opt/cray/hosts/1.0-1.0402.45251.1.86.gem/bin/cc...not found Checking for program /opt/cray/configuration/1.0-1.0402.45284.1.2.gem/bin/cc...not found Checking for program /opt/cray/ccm/default/sbin/cc...not found Checking for program /opt/cray/ccm/default/bin/cc...not found Checking for program /opt/cray/audit/1.0.0-1.0402.45273.1.86.gem/bin/cc...not found Checking for program /opt/cray/rca/1.0.0-2.0402.47290.7.1.gem/bin/cc...not found Checking for program /opt/cray/csa/3.0.0-1_2.0402.45268.1.90.gem/sbin/cc...not found Checking for program /opt/cray/csa/3.0.0-1_2.0402.45268.1.90.gem/bin/cc...not found Checking for program /opt/cray/job/1.5.5-0.1_2.0402.45272.1.5.gem/bin/cc...not found Checking for program /opt/cray/xpmem/0.1-2.0402.45248.1.5.gem/bin/cc...not found Checking for program /opt/cray/dmapp/4.0.1-1.0402.7784.4.1.gem/bin/cc...not found Checking for program /opt/cray/pmi/4.0.1-1.0000.9753.86.3.gem/bin/cc...not found Checking for program /opt/cray/ugni/5.0-1.0402.7551.1.10.gem/bin/cc...not found Checking for program /opt/cray/udreg/2.3.2-1.0402.7546.1.5.gem/bin/cc...not found Checking for program /opt/gcc/4.8.1/bin/cc...not found Checking for program /opt/cray/xt-asyncpe/5.23/bin/cc...found Defined make macro "CPP" to "cc -E" Pushing language C sh: cc -E -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.c Executing: cc -E -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.c sh: # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.c" # 1 "" # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.c" # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/confdefs.h" 1 # 2 "/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.c" 2 # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conffix.h" 1 # 3 "/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.c" 2 # 1 "/opt/cray/xe-sysroot/4.2.34/usr/include/stdlib.h" 1 3 4 # 25 "/opt/cray/xe-sysroot/4.2.34/usr/include/stdlib.h" 3 4 # 1 "/opt/cray/xe-sysroot/4.2.34/usr/include/features.h" 1 3 4 # 347 "/opt/cray/xe-sysroot/4.2.34/usr/include/features.h" 3 4 # 1 "/opt/cray/xe-sysroot/4.2.34/usr/include/sys/cdefs.h" 1 3 4 # 353 "/opt/cray/xe-sysroot/4.2.34/usr/include/sys/cdefs.h" 3 4 # 1 "/opt/cray/xe-sysroot/4.2.34/usr/include/bits/wordsize.h" 1 3 4 # 354 "/opt/cray/xe-sysroot/4.2.34/usr/include/sys/cdefs.h" 2 3 4 # 348 "/opt/cray/xe-sysroot/4.2.34/usr/include/features.h" 2 3 4 # 371 "/opt/cray/xe-sysroot/4.2.34/usr/include/features.h" 3 4 # 1 "/opt/cray/xe-sysroot/4.2.34/usr/include/gnu/stubs.h" 1 3 4 # 1 "/opt/cray/xe-sysroot/4.2.34/usr/include/bits/wordsize.h" 1 3 4 # 5 "/opt/cray/xe-sysroot/4.2.34/usr/include/gnu/stubs.h" 2 3 4 # 1 "/opt/cray/xe-sysroot/4.2.34/usr/include/gnu/stubs-64.h" 1 3 4 # 10 "/opt/cray/xe-sysroot/4.2.34/usr/include/gnu/stubs.h" 2 3 4 # 372 "/opt/cray/xe-sysroot/4.2.34/usr/include/features.h" 2 3 4 # 26 "/opt/cray/xe-sysroot/4.2.34/usr/include/stdlib.h" 2 3 4 # 1 "/opt/gcc/4.8.1/snos/lib/gcc/x86_64-suse-linux/4.8.1/include/stddef.h" 1 3 4 # 212 "/opt/gcc/4.8.1/snos/lib/gcc/x86_64-suse-linux/4.8.1/include/stddef.h" 3 4 typedef long unsigned int size_t; # 324 "/opt/gcc/4.8.1/snos/lib/gcc/x86_64-suse-linux/4.8.1/include/stddef.h" 3 4 typedef int wchar_t; # 34 "/opt/cray/xe-sysroot/4.2.34/usr/include/stdlib.h" 2 3 4 # 96 "/opt/cray/xe-sysroot/4.2.34/usr/include/stdlib.h" 3 4 typedef struct { int quot; int rem; } div_t; typedef struct { long int quot; long int rem; } ldiv_t; __extension__ typedef struct { long long int quot; long long int rem; } lldiv_t; # 140 "/opt/cray/xe-sysroot/4.2.34/usr/include/stdlib.h" 3 4 extern size_t __ctype_get_mb_cur_max (void) __attribute__ ((__nothrow__)) ; extern double atof (__const char *__nptr) __attribute__ ((__nothrow__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1))) ; extern int atoi (__const char *__nptr) __attribute__ ((__nothrow__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1))) ; extern long int atol (__const char *__nptr) __attribute__ ((__nothrow__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1))) ; __extension__ extern long long int atoll (__const char *__nptr) __attribute__ ((__nothrow__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1))) ; extern double strtod (__const char *__restrict __nptr, char **__restrict __endptr) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) ; extern float strtof (__const char *__restrict __nptr, char **__restrict __endptr) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) ; extern long double strtold (__const char *__restrict __nptr, char **__restrict __endptr) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) ; extern long int strtol (__const char *__restrict __nptr, char **__restrict __endptr, int __base) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) ; extern unsigned long int strtoul (__const char *__restrict __nptr, char **__restrict __endptr, int __base) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) ; __extension__ extern long long int strtoq (__const char *__restrict __nptr, char **__restrict __endptr, int __base) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) ; __extension__ extern unsigned long long int strtouq (__const char *__restrict __nptr, char **__restrict __endptr, int __base) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) ; __extension__ extern long long int strtoll (__const char *__restrict __nptr, char **__restrict __endptr, int __base) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) ; __extension__ extern unsigned long long int strtoull (__const char *__restrict __nptr, char **__restrict __endptr, int __base) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) ; # 311 "/opt/cray/xe-sysroot/4.2.34/usr/include/stdlib.h" 3 4 extern char *l64a (long int __n) __attribute__ ((__nothrow__)) ; extern long int a64l (__const char *__s) __attribute__ ((__nothrow__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1))) ; # 1 "/opt/cray/xe-sysroot/4.2.34/usr/include/sys/types.h" 1 3 4 # 29 "/opt/cray/xe-sysroot/4.2.34/usr/include/sys/types.h" 3 4 # 1 "/opt/cray/xe-sysroot/4.2.34/usr/include/bits/types.h" 1 3 4 # 28 "/opt/cray/xe-sysroot/4.2.34/usr/include/bits/types.h" 3 4 # 1 "/opt/cray/xe-sysroot/4.2.34/usr/include/bits/wordsize.h" 1 3 4 # 29 "/opt/cray/xe-sysroot/4.2.34/usr/include/bits/types.h" 2 3 4 typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; # 131 "/opt/cray/xe-sysroot/4.2.34/usr/include/bits/types.h" 3 4 # 1 "/opt/cray/xe-sysroot/4.2.34/usr/include/bits/typesizes.h" 1 3 4 # 132 "/opt/cray/xe-sysroot/4.2.34/usr/include/bits/types.h" 2 3 4 typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned long int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef long int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; # 32 "/opt/cray/xe-sysroot/4.2.34/usr/include/sys/types.h" 2 3 4 typedef __u_char u_char; typedef __u_short u_short; typedef __u_int u_int; typedef __u_long u_long; typedef __quad_t quad_t; typedef __u_quad_t u_quad_t; typedef __fsid_t fsid_t; typedef __loff_t loff_t; typedef __ino_t ino_t; # 62 "/opt/cray/xe-sysroot/4.2.34/usr/include/sys/types.h" 3 4 typedef __dev_t dev_t; typedef __gid_t gid_t; typedef __mode_t mode_t; typedef __nlink_t nlink_t; typedef __uid_t uid_t; typedef __off_t off_t; # 100 "/opt/cray/xe-sysroot/4.2.34/usr/include/sys/types.h" 3 4 typedef __pid_t pid_t; typedef __id_t id_t; typedef __ssize_t ssize_t; typedef __daddr_t daddr_t; typedef __caddr_t caddr_t; typedef __key_t key_t; # 133 "/opt/cray/xe-sysroot/4.2.34/usr/include/sys/types.h" 3 4 # 1 "/opt/cray/xe-sysroot/4.2.34/usr/include/time.h" 1 3 4 # 74 "/opt/cray/xe-sysroot/4.2.34/usr/include/time.h" 3 4 typedef __time_t time_t; # 92 "/opt/cray/xe-sysroot/4.2.34/usr/include/time.h" 3 4 typedef __clockid_t clockid_t; # 104 "/opt/cray/xe-sysroot/4.2.34/usr/include/time.h" 3 4 typedef __timer_t timer_t; # 134 "/opt/cray/xe-sysroot/4.2.34/usr/include/sys/types.h" 2 3 4 # 147 "/opt/cray/xe-sysroot/4.2.34/usr/include/sys/types.h" 3 4 # 1 "/opt/gcc/4.8.1/snos/lib/gcc/x86_64-suse-linux/4.8.1/include/stddef.h" 1 3 4 # 148 "/opt/cray/xe-sysroot/4.2.34/usr/include/sys/types.h" 2 3 4 typedef unsigned long int ulong; typedef unsigned short int ushort; typedef unsigned int uint; # 195 "/opt/cray/xe-sysroot/4.2.34/usr/include/sys/types.h" 3 4 typedef int int8_t __attribute__ ((__mode__ (__QI__))); typedef int int16_t __attribute__ ((__mode__ (__HI__))); typedef int int32_t __attribute__ ((__mode__ (__SI__))); typedef int int64_t __attribute__ ((__mode__ (__DI__))); typedef unsigned int u_int8_t __attribute__ ((__mode__ (__QI__))); typedef unsigned int u_int16_t __attribute__ ((__mode__ (__HI__))); typedef unsigned int u_int32_t __attribute__ ((__mode__ (__SI__))); typedef unsigned int u_int64_t __attribute__ ((__mode__ (__DI__))); typedef int register_t __attribute__ ((__mode__ (__word__))); # 217 "/opt/cray/xe-sysroot/4.2.34/usr/include/sys/types.h" 3 4 # 1 "/opt/cray/xe-sysroot/4.2.34/usr/include/endian.h" 1 3 4 # 37 "/opt/cray/xe-sysroot/4.2.34/usr/include/endian.h" 3 4 # 1 "/opt/cray/xe-sysroot/4.2.34/usr/include/bits/endian.h" 1 3 4 # 38 "/opt/cray/xe-sysroot/4.2.34/usr/include/endian.h" 2 3 4 # 61 "/opt/cray/xe-sysroot/4.2.34/usr/include/endian.h" 3 4 # 1 "/opt/cray/xe-sysroot/4.2.34/usr/include/bits/byteswap.h" 1 3 4 # 28 "/opt/cray/xe-sysroot/4.2.34/usr/include/bits/byteswap.h" 3 4 # 1 "/opt/cray/xe-sysroot/4.2.34/usr/include/bits/wordsize.h" 1 3 4 # 29 "/opt/cray/xe-sysroot/4.2.34/usr/include/bits/byteswap.h" 2 3 4 # 62 "/opt/cray/xe-sysroot/4.2.34/usr/include/endian.h" 2 3 4 # 218 "/opt/cray/xe-sysroot/4.2.34/usr/include/sys/types.h" 2 3 4 # 1 "/opt/cray/xe-sysroot/4.2.34/usr/include/sys/select.h" 1 3 4 # 31 "/opt/cray/xe-sysroot/4.2.34/usr/include/sys/select.h" 3 4 # 1 "/opt/cray/xe-sysroot/4.2.34/usr/include/bits/select.h" 1 3 4 # 23 "/opt/cray/xe-sysroot/4.2.34/usr/include/bits/select.h" 3 4 # 1 "/opt/cray/xe-sysroot/4.2.34/usr/include/bits/wordsize.h" 1 3 4 # 24 "/opt/cray/xe-sysroot/4.2.34/usr/include/bits/select.h" 2 3 4 # 32 "/opt/cray/xe-sysroot/4.2.34/usr/include/sys/select.h" 2 3 4 # 1 "/opt/cray/xe-sysroot/4.2.34/usr/include/bits/sigset.h" 1 3 4 # 24 "/opt/cray/xe-sysroot/4.2.34/usr/include/bits/sigset.h" 3 4 typedef int __sig_atomic_t; typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; # 35 "/opt/cray/xe-sysroot/4.2.34/usr/include/sys/select.h" 2 3 4 typedef __sigset_t sigset_t; # 1 "/opt/cray/xe-sysroot/4.2.34/usr/include/time.h" 1 3 4 # 120 "/opt/cray/xe-sysroot/4.2.34/usr/include/time.h" 3 4 struct timespec { __time_t tv_sec; long int tv_nsec; }; # 45 "/opt/cray/xe-sysroot/4.2.34/usr/include/sys/select.h" 2 3 4 # 1 "/opt/cray/xe-sysroot/4.2.34/usr/include/bits/time.h" 1 3 4 # 69 "/opt/cray/xe-sysroot/4.2.34/usr/include/bits/time.h" 3 4 struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; # 47 "/opt/cray/xe-sysroot/4.2.34/usr/include/sys/select.h" 2 3 4 typedef __suseconds_t suseconds_t; typedef long int __fd_mask; # 67 "/opt/cray/xe-sysroot/4.2.34/usr/include/sys/select.h" 3 4 typedef struct { __fd_mask __fds_bits[1024 / (8 * (int) sizeof (__fd_mask))]; } fd_set; typedef __fd_mask fd_mask; # 99 "/opt/cray/xe-sysroot/4.2.34/usr/include/sys/select.h" 3 4 # 109 "/opt/cray/xe-sysroot/4.2.34/usr/include/sys/select.h" 3 4 extern int select (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, struct timeval *__restrict __timeout); # 121 "/opt/cray/xe-sysroot/4.2.34/usr/include/sys/select.h" 3 4 extern int pselect (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, const struct timespec *__restrict __timeout, const __sigset_t *__restrict __sigmask); # 221 "/opt/cray/xe-sysroot/4.2.34/usr/include/sys/types.h" 2 3 4 # 1 "/opt/cray/xe-sysroot/4.2.34/usr/include/sys/sysmacros.h" 1 3 4 # 30 "/opt/cray/xe-sysroot/4.2.34/usr/include/sys/sysmacros.h" 3 4 __extension__ extern unsigned int gnu_dev_major (unsigned long long int __dev) __attribute__ ((__nothrow__)); __extension__ extern unsigned int gnu_dev_minor (unsigned long long int __dev) __attribute__ ((__nothrow__)); __extension__ extern unsigned long long int gnu_dev_makedev (unsigned int __major, unsigned int __minor) __attribute__ ((__nothrow__)); # 224 "/opt/cray/xe-sysroot/4.2.34/usr/include/sys/types.h" 2 3 4 # 235 "/opt/cray/xe-sysroot/4.2.34/usr/include/sys/types.h" 3 4 typedef __blkcnt_t blkcnt_t; typedef __fsblkcnt_t fsblkcnt_t; typedef __fsfilcnt_t fsfilcnt_t; # 270 "/opt/cray/xe-sysroot/4.2.34/usr/include/sys/types.h" 3 4 # 1 "/opt/cray/xe-sysroot/4.2.34/usr/include/bits/pthreadtypes.h" 1 3 4 # 23 "/opt/cray/xe-sysroot/4.2.34/usr/include/bits/pthreadtypes.h" 3 4 # 1 "/opt/cray/xe-sysroot/4.2.34/usr/include/bits/wordsize.h" 1 3 4 # 24 "/opt/cray/xe-sysroot/4.2.34/usr/include/bits/pthreadtypes.h" 2 3 4 # 50 "/opt/cray/xe-sysroot/4.2.34/usr/include/bits/pthreadtypes.h" 3 4 typedef unsigned long int pthread_t; typedef union { char __size[56]; long int __align; } pthread_attr_t; typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; # 76 "/opt/cray/xe-sysroot/4.2.34/usr/include/bits/pthreadtypes.h" 3 4 typedef union { struct __pthread_mutex_s { int __lock; unsigned int __count; int __owner; unsigned int __nusers; int __kind; int __spins; __pthread_list_t __list; # 101 "/opt/cray/xe-sysroot/4.2.34/usr/include/bits/pthreadtypes.h" 3 4 } __data; char __size[40]; long int __align; } pthread_mutex_t; typedef union { char __size[4]; int __align; } pthread_mutexattr_t; typedef union { struct { int __lock; unsigned int __futex; __extension__ unsigned long long int __total_seq; __extension__ unsigned long long int __wakeup_seq; __extension__ unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; __extension__ long long int __align; } pthread_cond_t; typedef union { char __size[4]; int __align; } pthread_condattr_t; typedef unsigned int pthread_key_t; typedef int pthread_once_t; typedef union { struct { int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; unsigned int __flags; } __data; # 187 "/opt/cray/xe-sysroot/4.2.34/usr/include/bits/pthreadtypes.h" 3 4 char __size[56]; long int __align; } pthread_rwlock_t; typedef union { char __size[8]; long int __align; } pthread_rwlockattr_t; typedef volatile int pthread_spinlock_t; typedef union { char __size[32]; long int __align; } pthread_barrier_t; typedef union { char __size[4]; int __align; } pthread_barrierattr_t; # 271 "/opt/cray/xe-sysroot/4.2.34/usr/include/sys/types.h" 2 3 4 # 321 "/opt/cray/xe-sysroot/4.2.34/usr/include/stdlib.h" 2 3 4 extern long int random (void) __attribute__ ((__nothrow__)); extern void srandom (unsigned int __seed) __attribute__ ((__nothrow__)); extern char *initstate (unsigned int __seed, char *__statebuf, size_t __statelen) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (2))); extern char *setstate (char *__statebuf) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); struct random_data { int32_t *fptr; int32_t *rptr; int32_t *state; int rand_type; int rand_deg; int rand_sep; int32_t *end_ptr; }; extern int random_r (struct random_data *__restrict __buf, int32_t *__restrict __result) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int srandom_r (unsigned int __seed, struct random_data *__buf) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (2))); extern int initstate_r (unsigned int __seed, char *__restrict __statebuf, size_t __statelen, struct random_data *__restrict __buf) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (2, 4))); extern int setstate_r (char *__restrict __statebuf, struct random_data *__restrict __buf) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int rand (void) __attribute__ ((__nothrow__)); extern void srand (unsigned int __seed) __attribute__ ((__nothrow__)); extern int rand_r (unsigned int *__seed) __attribute__ ((__nothrow__)); extern double drand48 (void) __attribute__ ((__nothrow__)); extern double erand48 (unsigned short int __xsubi[3]) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern long int lrand48 (void) __attribute__ ((__nothrow__)); extern long int nrand48 (unsigned short int __xsubi[3]) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern long int mrand48 (void) __attribute__ ((__nothrow__)); extern long int jrand48 (unsigned short int __xsubi[3]) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern void srand48 (long int __seedval) __attribute__ ((__nothrow__)); extern unsigned short int *seed48 (unsigned short int __seed16v[3]) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern void lcong48 (unsigned short int __param[7]) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); struct drand48_data { unsigned short int __x[3]; unsigned short int __old_x[3]; unsigned short int __c; unsigned short int __init; unsigned long long int __a; }; extern int drand48_r (struct drand48_data *__restrict __buffer, double *__restrict __result) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int erand48_r (unsigned short int __xsubi[3], struct drand48_data *__restrict __buffer, double *__restrict __result) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int lrand48_r (struct drand48_data *__restrict __buffer, long int *__restrict __result) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int nrand48_r (unsigned short int __xsubi[3], struct drand48_data *__restrict __buffer, long int *__restrict __result) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int mrand48_r (struct drand48_data *__restrict __buffer, long int *__restrict __result) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int jrand48_r (unsigned short int __xsubi[3], struct drand48_data *__restrict __buffer, long int *__restrict __result) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int srand48_r (long int __seedval, struct drand48_data *__buffer) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (2))); extern int seed48_r (unsigned short int __seed16v[3], struct drand48_data *__buffer) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int lcong48_r (unsigned short int __param[7], struct drand48_data *__buffer) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern void *malloc (size_t __size) __attribute__ ((__nothrow__)) __attribute__ ((__malloc__)) ; extern void *calloc (size_t __nmemb, size_t __size) __attribute__ ((__nothrow__)) __attribute__ ((__malloc__)) ; extern void *realloc (void *__ptr, size_t __size) __attribute__ ((__nothrow__)) __attribute__ ((__warn_unused_result__)); extern void free (void *__ptr) __attribute__ ((__nothrow__)); extern void cfree (void *__ptr) __attribute__ ((__nothrow__)); # 1 "/opt/cray/xe-sysroot/4.2.34/usr/include/alloca.h" 1 3 4 # 25 "/opt/cray/xe-sysroot/4.2.34/usr/include/alloca.h" 3 4 # 1 "/opt/gcc/4.8.1/snos/lib/gcc/x86_64-suse-linux/4.8.1/include/stddef.h" 1 3 4 # 26 "/opt/cray/xe-sysroot/4.2.34/usr/include/alloca.h" 2 3 4 extern void *alloca (size_t __size) __attribute__ ((__nothrow__)); # 498 "/opt/cray/xe-sysroot/4.2.34/usr/include/stdlib.h" 2 3 4 extern void *valloc (size_t __size) __attribute__ ((__nothrow__)) __attribute__ ((__malloc__)) ; extern int posix_memalign (void **__memptr, size_t __alignment, size_t __size) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) ; extern void abort (void) __attribute__ ((__nothrow__)) __attribute__ ((__noreturn__)); extern int atexit (void (*__func) (void)) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); # 530 "/opt/cray/xe-sysroot/4.2.34/usr/include/stdlib.h" 3 4 extern int on_exit (void (*__func) (int __status, void *__arg), void *__arg) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern void exit (int __status) __attribute__ ((__nothrow__)) __attribute__ ((__noreturn__)); # 553 "/opt/cray/xe-sysroot/4.2.34/usr/include/stdlib.h" 3 4 extern void _Exit (int __status) __attribute__ ((__nothrow__)) __attribute__ ((__noreturn__)); extern char *getenv (__const char *__name) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) ; extern char *__secure_getenv (__const char *__name) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) ; extern int putenv (char *__string) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int setenv (__const char *__name, __const char *__value, int __replace) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (2))); extern int unsetenv (__const char *__name) __attribute__ ((__nothrow__)); extern int clearenv (void) __attribute__ ((__nothrow__)); # 604 "/opt/cray/xe-sysroot/4.2.34/usr/include/stdlib.h" 3 4 extern char *mktemp (char *__template) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) ; # 615 "/opt/cray/xe-sysroot/4.2.34/usr/include/stdlib.h" 3 4 extern int mkstemp (char *__template) __attribute__ ((__nonnull__ (1))) ; # 637 "/opt/cray/xe-sysroot/4.2.34/usr/include/stdlib.h" 3 4 extern int mkstemps (char *__template, int __suffixlen) __attribute__ ((__nonnull__ (1))) ; # 658 "/opt/cray/xe-sysroot/4.2.34/usr/include/stdlib.h" 3 4 extern char *mkdtemp (char *__template) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) ; # 707 "/opt/cray/xe-sysroot/4.2.34/usr/include/stdlib.h" 3 4 extern int system (__const char *__command) ; # 729 "/opt/cray/xe-sysroot/4.2.34/usr/include/stdlib.h" 3 4 extern char *realpath (__const char *__restrict __name, char *__restrict __resolved) __attribute__ ((__nothrow__)) ; typedef int (*__compar_fn_t) (__const void *, __const void *); # 747 "/opt/cray/xe-sysroot/4.2.34/usr/include/stdlib.h" 3 4 extern void *bsearch (__const void *__key, __const void *__base, size_t __nmemb, size_t __size, __compar_fn_t __compar) __attribute__ ((__nonnull__ (1, 2, 5))) ; extern void qsort (void *__base, size_t __nmemb, size_t __size, __compar_fn_t __compar) __attribute__ ((__nonnull__ (1, 4))); # 766 "/opt/cray/xe-sysroot/4.2.34/usr/include/stdlib.h" 3 4 extern int abs (int __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)) ; extern long int labs (long int __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)) ; __extension__ extern long long int llabs (long long int __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)) ; extern div_t div (int __numer, int __denom) __attribute__ ((__nothrow__)) __attribute__ ((__const__)) ; extern ldiv_t ldiv (long int __numer, long int __denom) __attribute__ ((__nothrow__)) __attribute__ ((__const__)) ; __extension__ extern lldiv_t lldiv (long long int __numer, long long int __denom) __attribute__ ((__nothrow__)) __attribute__ ((__const__)) ; # 802 "/opt/cray/xe-sysroot/4.2.34/usr/include/stdlib.h" 3 4 extern char *ecvt (double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (3, 4))) ; extern char *fcvt (double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (3, 4))) ; extern char *gcvt (double __value, int __ndigit, char *__buf) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (3))) ; extern char *qecvt (long double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (3, 4))) ; extern char *qfcvt (long double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (3, 4))) ; extern char *qgcvt (long double __value, int __ndigit, char *__buf) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (3))) ; extern int ecvt_r (double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign, char *__restrict __buf, size_t __len) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (3, 4, 5))); extern int fcvt_r (double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign, char *__restrict __buf, size_t __len) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (3, 4, 5))); extern int qecvt_r (long double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign, char *__restrict __buf, size_t __len) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (3, 4, 5))); extern int qfcvt_r (long double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign, char *__restrict __buf, size_t __len) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (3, 4, 5))); extern int mblen (__const char *__s, size_t __n) __attribute__ ((__nothrow__)) ; extern int mbtowc (wchar_t *__restrict __pwc, __const char *__restrict __s, size_t __n) __attribute__ ((__nothrow__)) ; extern int wctomb (char *__s, wchar_t __wchar) __attribute__ ((__nothrow__)) ; extern size_t mbstowcs (wchar_t *__restrict __pwcs, __const char *__restrict __s, size_t __n) __attribute__ ((__nothrow__)); extern size_t wcstombs (char *__restrict __s, __const wchar_t *__restrict __pwcs, size_t __n) __attribute__ ((__nothrow__)); extern int rpmatch (__const char *__response) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) ; # 907 "/opt/cray/xe-sysroot/4.2.34/usr/include/stdlib.h" 3 4 extern int posix_openpt (int __oflag) ; # 942 "/opt/cray/xe-sysroot/4.2.34/usr/include/stdlib.h" 3 4 extern int getloadavg (double __loadavg[], int __nelem) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); # 958 "/opt/cray/xe-sysroot/4.2.34/usr/include/stdlib.h" 3 4 # 3 "/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.c" 2 Possible ERROR while running preprocessor: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" #include Popping language C Checking for program /usr/common/usg/darshan/2.2.6/bin/cc...not found Checking for program /scratch/altd/1.0/bin/cc...not found Checking for program /usr/common/usg/bin/cc...not found Checking for program /usr/common/mss/bin/cc...not found Checking for program /usr/common/nsg/bin/cc...not found Checking for program /global/common/carver/usg/matlab/R2012a/bin/cc...not found Checking for program /opt/cray/netcdf/4.3.0/bin/cc...not found Checking for program /opt/cray/hdf5/1.8.11/bin/cc...not found Checking for program /usr/common/usg/allineatools/4.2-34404/bin/cc...not found Checking for program /usr/common/usg/ipm/2.00/bin/cc...not found Checking for program /opt/cray/papi/5.1.2/perf_events/no-cuda/bin/cc...not found Checking for program /usr/common/graphics/visit/bin/cc...not found Checking for program /usr/common/usg/cmake/2.8.10.1/bin/cc...not found Checking for program /opt/cray/atp/1.7.0/bin/cc...not found Checking for program /opt/cray/switch/1.0-1.0402.45840.2.63.gem/bin/cc...not found Checking for program /opt/cray/shared-root/1.0-1.0402.46893.3.17.gem/bin/cc...not found Checking for program /opt/cray/pdsh/2.26-1.0402.45278.1.1.gem/bin/cc...not found Checking for program /opt/cray/nodehealth/5.1-1.0402.45895.3.76.gem/bin/cc...not found Checking for program /opt/cray/lbcd/2.1-1.0402.45245.1.2.gem/bin/cc...not found Checking for program /opt/cray/hosts/1.0-1.0402.45251.1.86.gem/bin/cc...not found Checking for program /opt/cray/configuration/1.0-1.0402.45284.1.2.gem/bin/cc...not found Checking for program /opt/cray/ccm/default/sbin/cc...not found Checking for program /opt/cray/ccm/default/bin/cc...not found Checking for program /opt/cray/audit/1.0.0-1.0402.45273.1.86.gem/bin/cc...not found Checking for program /opt/cray/rca/1.0.0-2.0402.47290.7.1.gem/bin/cc...not found Checking for program /opt/cray/csa/3.0.0-1_2.0402.45268.1.90.gem/sbin/cc...not found Checking for program /opt/cray/csa/3.0.0-1_2.0402.45268.1.90.gem/bin/cc...not found Checking for program /opt/cray/job/1.5.5-0.1_2.0402.45272.1.5.gem/bin/cc...not found Checking for program /opt/cray/xpmem/0.1-2.0402.45248.1.5.gem/bin/cc...not found Checking for program /opt/cray/dmapp/4.0.1-1.0402.7784.4.1.gem/bin/cc...not found Checking for program /opt/cray/pmi/4.0.1-1.0000.9753.86.3.gem/bin/cc...not found Checking for program /opt/cray/ugni/5.0-1.0402.7551.1.10.gem/bin/cc...not found Checking for program /opt/cray/udreg/2.3.2-1.0402.7546.1.5.gem/bin/cc...not found Checking for program /opt/gcc/4.8.1/bin/cc...not found Checking for program /opt/cray/xt-asyncpe/5.23/bin/cc...found Defined make macro "CPP" to "cc --use cpp32" Pushing language C sh: cc --use cpp32 -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.c Executing: cc --use cpp32 -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.c sh: Possible ERROR while running preprocessor: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded gcc: error: cpp32: No such file or directory ret = 256 error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded gcc: error: cpp32: No such file or directory } Source: #include "confdefs.h" #include "conffix.h" #include Popping language C Checking for program /usr/common/usg/darshan/2.2.6/bin/gcc...not found Checking for program /scratch/altd/1.0/bin/gcc...not found Checking for program /usr/common/usg/bin/gcc...not found Checking for program /usr/common/mss/bin/gcc...not found Checking for program /usr/common/nsg/bin/gcc...not found Checking for program /global/common/carver/usg/matlab/R2012a/bin/gcc...not found Checking for program /opt/cray/netcdf/4.3.0/bin/gcc...not found Checking for program /opt/cray/hdf5/1.8.11/bin/gcc...not found Checking for program /usr/common/usg/allineatools/4.2-34404/bin/gcc...not found Checking for program /usr/common/usg/ipm/2.00/bin/gcc...not found Checking for program /opt/cray/papi/5.1.2/perf_events/no-cuda/bin/gcc...not found Checking for program /usr/common/graphics/visit/bin/gcc...not found Checking for program /usr/common/usg/cmake/2.8.10.1/bin/gcc...not found Checking for program /opt/cray/atp/1.7.0/bin/gcc...not found Checking for program /opt/cray/switch/1.0-1.0402.45840.2.63.gem/bin/gcc...not found Checking for program /opt/cray/shared-root/1.0-1.0402.46893.3.17.gem/bin/gcc...not found Checking for program /opt/cray/pdsh/2.26-1.0402.45278.1.1.gem/bin/gcc...not found Checking for program /opt/cray/nodehealth/5.1-1.0402.45895.3.76.gem/bin/gcc...not found Checking for program /opt/cray/lbcd/2.1-1.0402.45245.1.2.gem/bin/gcc...not found Checking for program /opt/cray/hosts/1.0-1.0402.45251.1.86.gem/bin/gcc...not found Checking for program /opt/cray/configuration/1.0-1.0402.45284.1.2.gem/bin/gcc...not found Checking for program /opt/cray/ccm/default/sbin/gcc...not found Checking for program /opt/cray/ccm/default/bin/gcc...not found Checking for program /opt/cray/audit/1.0.0-1.0402.45273.1.86.gem/bin/gcc...not found Checking for program /opt/cray/rca/1.0.0-2.0402.47290.7.1.gem/bin/gcc...not found Checking for program /opt/cray/csa/3.0.0-1_2.0402.45268.1.90.gem/sbin/gcc...not found Checking for program /opt/cray/csa/3.0.0-1_2.0402.45268.1.90.gem/bin/gcc...not found Checking for program /opt/cray/job/1.5.5-0.1_2.0402.45272.1.5.gem/bin/gcc...not found Checking for program /opt/cray/xpmem/0.1-2.0402.45248.1.5.gem/bin/gcc...not found Checking for program /opt/cray/dmapp/4.0.1-1.0402.7784.4.1.gem/bin/gcc...not found Checking for program /opt/cray/pmi/4.0.1-1.0000.9753.86.3.gem/bin/gcc...not found Checking for program /opt/cray/ugni/5.0-1.0402.7551.1.10.gem/bin/gcc...not found Checking for program /opt/cray/udreg/2.3.2-1.0402.7546.1.5.gem/bin/gcc...not found Checking for program /opt/gcc/4.8.1/bin/gcc...found Defined make macro "CPP" to "gcc -E" Pushing language C sh: gcc -E -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.c Executing: gcc -E -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.c sh: # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.c" # 1 "" # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.c" # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/confdefs.h" 1 # 2 "/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.c" 2 # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conffix.h" 1 # 3 "/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.c" 2 # 1 "/usr/include/stdlib.h" 1 3 4 # 25 "/usr/include/stdlib.h" 3 4 # 1 "/usr/include/features.h" 1 3 4 # 347 "/usr/include/features.h" 3 4 # 1 "/usr/include/sys/cdefs.h" 1 3 4 # 353 "/usr/include/sys/cdefs.h" 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 354 "/usr/include/sys/cdefs.h" 2 3 4 # 348 "/usr/include/features.h" 2 3 4 # 371 "/usr/include/features.h" 3 4 # 1 "/usr/include/gnu/stubs.h" 1 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 5 "/usr/include/gnu/stubs.h" 2 3 4 # 1 "/usr/include/gnu/stubs-64.h" 1 3 4 # 10 "/usr/include/gnu/stubs.h" 2 3 4 # 372 "/usr/include/features.h" 2 3 4 # 26 "/usr/include/stdlib.h" 2 3 4 # 1 "/opt/gcc/4.8.1/snos/lib/gcc/x86_64-suse-linux/4.8.1/include/stddef.h" 1 3 4 # 212 "/opt/gcc/4.8.1/snos/lib/gcc/x86_64-suse-linux/4.8.1/include/stddef.h" 3 4 typedef long unsigned int size_t; # 324 "/opt/gcc/4.8.1/snos/lib/gcc/x86_64-suse-linux/4.8.1/include/stddef.h" 3 4 typedef int wchar_t; # 34 "/usr/include/stdlib.h" 2 3 4 # 96 "/usr/include/stdlib.h" 3 4 typedef struct { int quot; int rem; } div_t; typedef struct { long int quot; long int rem; } ldiv_t; __extension__ typedef struct { long long int quot; long long int rem; } lldiv_t; # 140 "/usr/include/stdlib.h" 3 4 extern size_t __ctype_get_mb_cur_max (void) __attribute__ ((__nothrow__)) ; extern double atof (__const char *__nptr) __attribute__ ((__nothrow__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1))) ; extern int atoi (__const char *__nptr) __attribute__ ((__nothrow__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1))) ; extern long int atol (__const char *__nptr) __attribute__ ((__nothrow__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1))) ; __extension__ extern long long int atoll (__const char *__nptr) __attribute__ ((__nothrow__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1))) ; extern double strtod (__const char *__restrict __nptr, char **__restrict __endptr) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) ; extern float strtof (__const char *__restrict __nptr, char **__restrict __endptr) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) ; extern long double strtold (__const char *__restrict __nptr, char **__restrict __endptr) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) ; extern long int strtol (__const char *__restrict __nptr, char **__restrict __endptr, int __base) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) ; extern unsigned long int strtoul (__const char *__restrict __nptr, char **__restrict __endptr, int __base) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) ; __extension__ extern long long int strtoq (__const char *__restrict __nptr, char **__restrict __endptr, int __base) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) ; __extension__ extern unsigned long long int strtouq (__const char *__restrict __nptr, char **__restrict __endptr, int __base) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) ; __extension__ extern long long int strtoll (__const char *__restrict __nptr, char **__restrict __endptr, int __base) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) ; __extension__ extern unsigned long long int strtoull (__const char *__restrict __nptr, char **__restrict __endptr, int __base) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) ; # 311 "/usr/include/stdlib.h" 3 4 extern char *l64a (long int __n) __attribute__ ((__nothrow__)) ; extern long int a64l (__const char *__s) __attribute__ ((__nothrow__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1))) ; # 1 "/usr/include/sys/types.h" 1 3 4 # 29 "/usr/include/sys/types.h" 3 4 # 1 "/usr/include/bits/types.h" 1 3 4 # 28 "/usr/include/bits/types.h" 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 29 "/usr/include/bits/types.h" 2 3 4 typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; # 131 "/usr/include/bits/types.h" 3 4 # 1 "/usr/include/bits/typesizes.h" 1 3 4 # 132 "/usr/include/bits/types.h" 2 3 4 typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned long int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef long int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; # 32 "/usr/include/sys/types.h" 2 3 4 typedef __u_char u_char; typedef __u_short u_short; typedef __u_int u_int; typedef __u_long u_long; typedef __quad_t quad_t; typedef __u_quad_t u_quad_t; typedef __fsid_t fsid_t; typedef __loff_t loff_t; typedef __ino_t ino_t; # 62 "/usr/include/sys/types.h" 3 4 typedef __dev_t dev_t; typedef __gid_t gid_t; typedef __mode_t mode_t; typedef __nlink_t nlink_t; typedef __uid_t uid_t; typedef __off_t off_t; # 100 "/usr/include/sys/types.h" 3 4 typedef __pid_t pid_t; typedef __id_t id_t; typedef __ssize_t ssize_t; typedef __daddr_t daddr_t; typedef __caddr_t caddr_t; typedef __key_t key_t; # 133 "/usr/include/sys/types.h" 3 4 # 1 "/usr/include/time.h" 1 3 4 # 74 "/usr/include/time.h" 3 4 typedef __time_t time_t; # 92 "/usr/include/time.h" 3 4 typedef __clockid_t clockid_t; # 104 "/usr/include/time.h" 3 4 typedef __timer_t timer_t; # 134 "/usr/include/sys/types.h" 2 3 4 # 147 "/usr/include/sys/types.h" 3 4 # 1 "/opt/gcc/4.8.1/snos/lib/gcc/x86_64-suse-linux/4.8.1/include/stddef.h" 1 3 4 # 148 "/usr/include/sys/types.h" 2 3 4 typedef unsigned long int ulong; typedef unsigned short int ushort; typedef unsigned int uint; # 195 "/usr/include/sys/types.h" 3 4 typedef int int8_t __attribute__ ((__mode__ (__QI__))); typedef int int16_t __attribute__ ((__mode__ (__HI__))); typedef int int32_t __attribute__ ((__mode__ (__SI__))); typedef int int64_t __attribute__ ((__mode__ (__DI__))); typedef unsigned int u_int8_t __attribute__ ((__mode__ (__QI__))); typedef unsigned int u_int16_t __attribute__ ((__mode__ (__HI__))); typedef unsigned int u_int32_t __attribute__ ((__mode__ (__SI__))); typedef unsigned int u_int64_t __attribute__ ((__mode__ (__DI__))); typedef int register_t __attribute__ ((__mode__ (__word__))); # 217 "/usr/include/sys/types.h" 3 4 # 1 "/usr/include/endian.h" 1 3 4 # 37 "/usr/include/endian.h" 3 4 # 1 "/usr/include/bits/endian.h" 1 3 4 # 38 "/usr/include/endian.h" 2 3 4 # 61 "/usr/include/endian.h" 3 4 # 1 "/usr/include/bits/byteswap.h" 1 3 4 # 28 "/usr/include/bits/byteswap.h" 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 29 "/usr/include/bits/byteswap.h" 2 3 4 # 62 "/usr/include/endian.h" 2 3 4 # 218 "/usr/include/sys/types.h" 2 3 4 # 1 "/usr/include/sys/select.h" 1 3 4 # 31 "/usr/include/sys/select.h" 3 4 # 1 "/usr/include/bits/select.h" 1 3 4 # 23 "/usr/include/bits/select.h" 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 24 "/usr/include/bits/select.h" 2 3 4 # 32 "/usr/include/sys/select.h" 2 3 4 # 1 "/usr/include/bits/sigset.h" 1 3 4 # 24 "/usr/include/bits/sigset.h" 3 4 typedef int __sig_atomic_t; typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; # 35 "/usr/include/sys/select.h" 2 3 4 typedef __sigset_t sigset_t; # 1 "/usr/include/time.h" 1 3 4 # 120 "/usr/include/time.h" 3 4 struct timespec { __time_t tv_sec; long int tv_nsec; }; # 45 "/usr/include/sys/select.h" 2 3 4 # 1 "/usr/include/bits/time.h" 1 3 4 # 69 "/usr/include/bits/time.h" 3 4 struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; # 47 "/usr/include/sys/select.h" 2 3 4 typedef __suseconds_t suseconds_t; typedef long int __fd_mask; # 67 "/usr/include/sys/select.h" 3 4 typedef struct { __fd_mask __fds_bits[1024 / (8 * (int) sizeof (__fd_mask))]; } fd_set; typedef __fd_mask fd_mask; # 99 "/usr/include/sys/select.h" 3 4 # 109 "/usr/include/sys/select.h" 3 4 extern int select (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, struct timeval *__restrict __timeout); # 121 "/usr/include/sys/select.h" 3 4 extern int pselect (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, const struct timespec *__restrict __timeout, const __sigset_t *__restrict __sigmask); # 221 "/usr/include/sys/types.h" 2 3 4 # 1 "/usr/include/sys/sysmacros.h" 1 3 4 # 30 "/usr/include/sys/sysmacros.h" 3 4 __extension__ extern unsigned int gnu_dev_major (unsigned long long int __dev) __attribute__ ((__nothrow__)); __extension__ extern unsigned int gnu_dev_minor (unsigned long long int __dev) __attribute__ ((__nothrow__)); __extension__ extern unsigned long long int gnu_dev_makedev (unsigned int __major, unsigned int __minor) __attribute__ ((__nothrow__)); # 224 "/usr/include/sys/types.h" 2 3 4 # 235 "/usr/include/sys/types.h" 3 4 typedef __blkcnt_t blkcnt_t; typedef __fsblkcnt_t fsblkcnt_t; typedef __fsfilcnt_t fsfilcnt_t; # 270 "/usr/include/sys/types.h" 3 4 # 1 "/usr/include/bits/pthreadtypes.h" 1 3 4 # 23 "/usr/include/bits/pthreadtypes.h" 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 24 "/usr/include/bits/pthreadtypes.h" 2 3 4 # 50 "/usr/include/bits/pthreadtypes.h" 3 4 typedef unsigned long int pthread_t; typedef union { char __size[56]; long int __align; } pthread_attr_t; typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; # 76 "/usr/include/bits/pthreadtypes.h" 3 4 typedef union { struct __pthread_mutex_s { int __lock; unsigned int __count; int __owner; unsigned int __nusers; int __kind; int __spins; __pthread_list_t __list; # 101 "/usr/include/bits/pthreadtypes.h" 3 4 } __data; char __size[40]; long int __align; } pthread_mutex_t; typedef union { char __size[4]; int __align; } pthread_mutexattr_t; typedef union { struct { int __lock; unsigned int __futex; __extension__ unsigned long long int __total_seq; __extension__ unsigned long long int __wakeup_seq; __extension__ unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; __extension__ long long int __align; } pthread_cond_t; typedef union { char __size[4]; int __align; } pthread_condattr_t; typedef unsigned int pthread_key_t; typedef int pthread_once_t; typedef union { struct { int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; unsigned int __flags; } __data; # 187 "/usr/include/bits/pthreadtypes.h" 3 4 char __size[56]; long int __align; } pthread_rwlock_t; typedef union { char __size[8]; long int __align; } pthread_rwlockattr_t; typedef volatile int pthread_spinlock_t; typedef union { char __size[32]; long int __align; } pthread_barrier_t; typedef union { char __size[4]; int __align; } pthread_barrierattr_t; # 271 "/usr/include/sys/types.h" 2 3 4 # 321 "/usr/include/stdlib.h" 2 3 4 extern long int random (void) __attribute__ ((__nothrow__)); extern void srandom (unsigned int __seed) __attribute__ ((__nothrow__)); extern char *initstate (unsigned int __seed, char *__statebuf, size_t __statelen) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (2))); extern char *setstate (char *__statebuf) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); struct random_data { int32_t *fptr; int32_t *rptr; int32_t *state; int rand_type; int rand_deg; int rand_sep; int32_t *end_ptr; }; extern int random_r (struct random_data *__restrict __buf, int32_t *__restrict __result) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int srandom_r (unsigned int __seed, struct random_data *__buf) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (2))); extern int initstate_r (unsigned int __seed, char *__restrict __statebuf, size_t __statelen, struct random_data *__restrict __buf) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (2, 4))); extern int setstate_r (char *__restrict __statebuf, struct random_data *__restrict __buf) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int rand (void) __attribute__ ((__nothrow__)); extern void srand (unsigned int __seed) __attribute__ ((__nothrow__)); extern int rand_r (unsigned int *__seed) __attribute__ ((__nothrow__)); extern double drand48 (void) __attribute__ ((__nothrow__)); extern double erand48 (unsigned short int __xsubi[3]) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern long int lrand48 (void) __attribute__ ((__nothrow__)); extern long int nrand48 (unsigned short int __xsubi[3]) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern long int mrand48 (void) __attribute__ ((__nothrow__)); extern long int jrand48 (unsigned short int __xsubi[3]) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern void srand48 (long int __seedval) __attribute__ ((__nothrow__)); extern unsigned short int *seed48 (unsigned short int __seed16v[3]) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern void lcong48 (unsigned short int __param[7]) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); struct drand48_data { unsigned short int __x[3]; unsigned short int __old_x[3]; unsigned short int __c; unsigned short int __init; unsigned long long int __a; }; extern int drand48_r (struct drand48_data *__restrict __buffer, double *__restrict __result) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int erand48_r (unsigned short int __xsubi[3], struct drand48_data *__restrict __buffer, double *__restrict __result) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int lrand48_r (struct drand48_data *__restrict __buffer, long int *__restrict __result) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int nrand48_r (unsigned short int __xsubi[3], struct drand48_data *__restrict __buffer, long int *__restrict __result) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int mrand48_r (struct drand48_data *__restrict __buffer, long int *__restrict __result) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int jrand48_r (unsigned short int __xsubi[3], struct drand48_data *__restrict __buffer, long int *__restrict __result) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int srand48_r (long int __seedval, struct drand48_data *__buffer) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (2))); extern int seed48_r (unsigned short int __seed16v[3], struct drand48_data *__buffer) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int lcong48_r (unsigned short int __param[7], struct drand48_data *__buffer) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern void *malloc (size_t __size) __attribute__ ((__nothrow__)) __attribute__ ((__malloc__)) ; extern void *calloc (size_t __nmemb, size_t __size) __attribute__ ((__nothrow__)) __attribute__ ((__malloc__)) ; extern void *realloc (void *__ptr, size_t __size) __attribute__ ((__nothrow__)) __attribute__ ((__warn_unused_result__)); extern void free (void *__ptr) __attribute__ ((__nothrow__)); extern void cfree (void *__ptr) __attribute__ ((__nothrow__)); # 1 "/usr/include/alloca.h" 1 3 4 # 25 "/usr/include/alloca.h" 3 4 # 1 "/opt/gcc/4.8.1/snos/lib/gcc/x86_64-suse-linux/4.8.1/include/stddef.h" 1 3 4 # 26 "/usr/include/alloca.h" 2 3 4 extern void *alloca (size_t __size) __attribute__ ((__nothrow__)); # 498 "/usr/include/stdlib.h" 2 3 4 extern void *valloc (size_t __size) __attribute__ ((__nothrow__)) __attribute__ ((__malloc__)) ; extern int posix_memalign (void **__memptr, size_t __alignment, size_t __size) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) ; extern void abort (void) __attribute__ ((__nothrow__)) __attribute__ ((__noreturn__)); extern int atexit (void (*__func) (void)) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); # 530 "/usr/include/stdlib.h" 3 4 extern int on_exit (void (*__func) (int __status, void *__arg), void *__arg) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern void exit (int __status) __attribute__ ((__nothrow__)) __attribute__ ((__noreturn__)); # 553 "/usr/include/stdlib.h" 3 4 extern void _Exit (int __status) __attribute__ ((__nothrow__)) __attribute__ ((__noreturn__)); extern char *getenv (__const char *__name) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) ; extern char *__secure_getenv (__const char *__name) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) ; extern int putenv (char *__string) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int setenv (__const char *__name, __const char *__value, int __replace) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (2))); extern int unsetenv (__const char *__name) __attribute__ ((__nothrow__)); extern int clearenv (void) __attribute__ ((__nothrow__)); # 604 "/usr/include/stdlib.h" 3 4 extern char *mktemp (char *__template) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) ; # 615 "/usr/include/stdlib.h" 3 4 extern int mkstemp (char *__template) __attribute__ ((__nonnull__ (1))) ; # 637 "/usr/include/stdlib.h" 3 4 extern int mkstemps (char *__template, int __suffixlen) __attribute__ ((__nonnull__ (1))) ; # 658 "/usr/include/stdlib.h" 3 4 extern char *mkdtemp (char *__template) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) ; # 707 "/usr/include/stdlib.h" 3 4 extern int system (__const char *__command) ; # 729 "/usr/include/stdlib.h" 3 4 extern char *realpath (__const char *__restrict __name, char *__restrict __resolved) __attribute__ ((__nothrow__)) ; typedef int (*__compar_fn_t) (__const void *, __const void *); # 747 "/usr/include/stdlib.h" 3 4 extern void *bsearch (__const void *__key, __const void *__base, size_t __nmemb, size_t __size, __compar_fn_t __compar) __attribute__ ((__nonnull__ (1, 2, 5))) ; extern void qsort (void *__base, size_t __nmemb, size_t __size, __compar_fn_t __compar) __attribute__ ((__nonnull__ (1, 4))); # 766 "/usr/include/stdlib.h" 3 4 extern int abs (int __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)) ; extern long int labs (long int __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)) ; __extension__ extern long long int llabs (long long int __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)) ; extern div_t div (int __numer, int __denom) __attribute__ ((__nothrow__)) __attribute__ ((__const__)) ; extern ldiv_t ldiv (long int __numer, long int __denom) __attribute__ ((__nothrow__)) __attribute__ ((__const__)) ; __extension__ extern lldiv_t lldiv (long long int __numer, long long int __denom) __attribute__ ((__nothrow__)) __attribute__ ((__const__)) ; # 802 "/usr/include/stdlib.h" 3 4 extern char *ecvt (double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (3, 4))) ; extern char *fcvt (double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (3, 4))) ; extern char *gcvt (double __value, int __ndigit, char *__buf) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (3))) ; extern char *qecvt (long double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (3, 4))) ; extern char *qfcvt (long double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (3, 4))) ; extern char *qgcvt (long double __value, int __ndigit, char *__buf) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (3))) ; extern int ecvt_r (double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign, char *__restrict __buf, size_t __len) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (3, 4, 5))); extern int fcvt_r (double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign, char *__restrict __buf, size_t __len) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (3, 4, 5))); extern int qecvt_r (long double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign, char *__restrict __buf, size_t __len) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (3, 4, 5))); extern int qfcvt_r (long double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign, char *__restrict __buf, size_t __len) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (3, 4, 5))); extern int mblen (__const char *__s, size_t __n) __attribute__ ((__nothrow__)) ; extern int mbtowc (wchar_t *__restrict __pwc, __const char *__restrict __s, size_t __n) __attribute__ ((__nothrow__)) ; extern int wctomb (char *__s, wchar_t __wchar) __attribute__ ((__nothrow__)) ; extern size_t mbstowcs (wchar_t *__restrict __pwcs, __const char *__restrict __s, size_t __n) __attribute__ ((__nothrow__)); extern size_t wcstombs (char *__restrict __s, __const wchar_t *__restrict __pwcs, size_t __n) __attribute__ ((__nothrow__)); extern int rpmatch (__const char *__response) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) ; # 907 "/usr/include/stdlib.h" 3 4 extern int posix_openpt (int __oflag) ; # 942 "/usr/include/stdlib.h" 3 4 extern int getloadavg (double __loadavg[], int __nelem) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); # 958 "/usr/include/stdlib.h" 3 4 # 3 "/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.c" 2 Popping language C ================================================================================ TEST checkCUDACompiler from config.setCompilers(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/setCompilers.py:594) TESTING: checkCUDACompiler from config.setCompilers(config/BuildSystem/config/setCompilers.py:594) Locate a functional CUDA compiler Checking for program /usr/common/usg/darshan/2.2.6/bin/nvcc...not found Checking for program /scratch/altd/1.0/bin/nvcc...not found Checking for program /usr/common/usg/bin/nvcc...not found Checking for program /usr/common/mss/bin/nvcc...not found Checking for program /usr/common/nsg/bin/nvcc...not found Checking for program /global/common/carver/usg/matlab/R2012a/bin/nvcc...not found Checking for program /opt/cray/netcdf/4.3.0/bin/nvcc...not found Checking for program /opt/cray/hdf5/1.8.11/bin/nvcc...not found Checking for program /usr/common/usg/allineatools/4.2-34404/bin/nvcc...not found Checking for program /usr/common/usg/ipm/2.00/bin/nvcc...not found Checking for program /opt/cray/papi/5.1.2/perf_events/no-cuda/bin/nvcc...not found Checking for program /usr/common/graphics/visit/bin/nvcc...not found Checking for program /usr/common/usg/cmake/2.8.10.1/bin/nvcc...not found Checking for program /opt/cray/atp/1.7.0/bin/nvcc...not found Checking for program /opt/cray/switch/1.0-1.0402.45840.2.63.gem/bin/nvcc...not found Checking for program /opt/cray/shared-root/1.0-1.0402.46893.3.17.gem/bin/nvcc...not found Checking for program /opt/cray/pdsh/2.26-1.0402.45278.1.1.gem/bin/nvcc...not found Checking for program /opt/cray/nodehealth/5.1-1.0402.45895.3.76.gem/bin/nvcc...not found Checking for program /opt/cray/lbcd/2.1-1.0402.45245.1.2.gem/bin/nvcc...not found Checking for program /opt/cray/hosts/1.0-1.0402.45251.1.86.gem/bin/nvcc...not found Checking for program /opt/cray/configuration/1.0-1.0402.45284.1.2.gem/bin/nvcc...not found Checking for program /opt/cray/ccm/default/sbin/nvcc...not found Checking for program /opt/cray/ccm/default/bin/nvcc...not found Checking for program /opt/cray/audit/1.0.0-1.0402.45273.1.86.gem/bin/nvcc...not found Checking for program /opt/cray/rca/1.0.0-2.0402.47290.7.1.gem/bin/nvcc...not found Checking for program /opt/cray/csa/3.0.0-1_2.0402.45268.1.90.gem/sbin/nvcc...not found Checking for program /opt/cray/csa/3.0.0-1_2.0402.45268.1.90.gem/bin/nvcc...not found Checking for program /opt/cray/job/1.5.5-0.1_2.0402.45272.1.5.gem/bin/nvcc...not found Checking for program /opt/cray/xpmem/0.1-2.0402.45248.1.5.gem/bin/nvcc...not found Checking for program /opt/cray/dmapp/4.0.1-1.0402.7784.4.1.gem/bin/nvcc...not found Checking for program /opt/cray/pmi/4.0.1-1.0000.9753.86.3.gem/bin/nvcc...not found Checking for program /opt/cray/ugni/5.0-1.0402.7551.1.10.gem/bin/nvcc...not found Checking for program /opt/cray/udreg/2.3.2-1.0402.7546.1.5.gem/bin/nvcc...not found Checking for program /opt/gcc/4.8.1/bin/nvcc...not found Checking for program /opt/cray/xt-asyncpe/5.23/bin/nvcc...not found Checking for program /usr/common/usg/valgrind/3.8.1/bin/nvcc...not found Checking for program /global/homes/m/madams/git-fat/nvcc...not found Checking for program /opt/moab/7.2.3_notcpretry/bin/nvcc...not found Checking for program /opt/moab/7.2.3_notcpretry/sbin/nvcc...not found Checking for program /opt/torque/4.2.3.h5_notcpretry/sbin/nvcc...not found Checking for program /opt/torque/4.2.3.h5_notcpretry/bin/nvcc...not found Checking for program /opt/cray/eslogin/eswrap/1.0.20-1.010102.662.0/bin/nvcc...not found Checking for program /opt/modules/3.2.6.7/bin/nvcc...not found Checking for program /usr/syscom/nsg/sbin/nvcc...not found Checking for program /usr/syscom/nsg/bin/nvcc...not found Checking for program /opt/modules/3.2.6.6/bin/nvcc...not found Checking for program /usr/lpp/mmfs/bin/nvcc...not found Checking for program /usr/local/bin/nvcc...not found Checking for program /usr/bin/nvcc...not found Checking for program /bin/nvcc...not found Checking for program /usr/bin/X11/nvcc...not found Checking for program /usr/X11R6/bin/nvcc...not found Checking for program /usr/games/nvcc...not found Checking for program /usr/lib64/jvm/jre/bin/nvcc...not found Checking for program /usr/lib/mit/bin/nvcc...not found Checking for program /usr/lib/mit/sbin/nvcc...not found Checking for program /usr/lib/qt3/bin/nvcc...not found Checking for program /opt/cray/bin/nvcc...not found Checking for program /global/homes/m/madams/nvcc...not found Checking for program /global/homes/m/madams/petsc_maint/bin/win32fe/nvcc...not found Checking for program /usr/common/usg/darshan/2.2.6/bin/nvcc...not found Checking for program /scratch/altd/1.0/bin/nvcc...not found Checking for program /usr/common/usg/bin/nvcc...not found Checking for program /usr/common/mss/bin/nvcc...not found Checking for program /usr/common/nsg/bin/nvcc...not found Checking for program /global/common/carver/usg/matlab/R2012a/bin/nvcc...not found Checking for program /opt/cray/netcdf/4.3.0/bin/nvcc...not found Checking for program /opt/cray/hdf5/1.8.11/bin/nvcc...not found Checking for program /usr/common/usg/allineatools/4.2-34404/bin/nvcc...not found Checking for program /usr/common/usg/ipm/2.00/bin/nvcc...not found Checking for program /opt/cray/papi/5.1.2/perf_events/no-cuda/bin/nvcc...not found Checking for program /usr/common/graphics/visit/bin/nvcc...not found Checking for program /usr/common/usg/cmake/2.8.10.1/bin/nvcc...not found Checking for program /opt/cray/atp/1.7.0/bin/nvcc...not found Checking for program /opt/cray/switch/1.0-1.0402.45840.2.63.gem/bin/nvcc...not found Checking for program /opt/cray/shared-root/1.0-1.0402.46893.3.17.gem/bin/nvcc...not found Checking for program /opt/cray/pdsh/2.26-1.0402.45278.1.1.gem/bin/nvcc...not found Checking for program /opt/cray/nodehealth/5.1-1.0402.45895.3.76.gem/bin/nvcc...not found Checking for program /opt/cray/lbcd/2.1-1.0402.45245.1.2.gem/bin/nvcc...not found Checking for program /opt/cray/hosts/1.0-1.0402.45251.1.86.gem/bin/nvcc...not found Checking for program /opt/cray/configuration/1.0-1.0402.45284.1.2.gem/bin/nvcc...not found Checking for program /opt/cray/ccm/default/sbin/nvcc...not found Checking for program /opt/cray/ccm/default/bin/nvcc...not found Checking for program /opt/cray/audit/1.0.0-1.0402.45273.1.86.gem/bin/nvcc...not found Checking for program /opt/cray/rca/1.0.0-2.0402.47290.7.1.gem/bin/nvcc...not found Checking for program /opt/cray/csa/3.0.0-1_2.0402.45268.1.90.gem/sbin/nvcc...not found Checking for program /opt/cray/csa/3.0.0-1_2.0402.45268.1.90.gem/bin/nvcc...not found Checking for program /opt/cray/job/1.5.5-0.1_2.0402.45272.1.5.gem/bin/nvcc...not found Checking for program /opt/cray/xpmem/0.1-2.0402.45248.1.5.gem/bin/nvcc...not found Checking for program /opt/cray/dmapp/4.0.1-1.0402.7784.4.1.gem/bin/nvcc...not found Checking for program /opt/cray/pmi/4.0.1-1.0000.9753.86.3.gem/bin/nvcc...not found Checking for program /opt/cray/ugni/5.0-1.0402.7551.1.10.gem/bin/nvcc...not found Checking for program /opt/cray/udreg/2.3.2-1.0402.7546.1.5.gem/bin/nvcc...not found Checking for program /opt/gcc/4.8.1/bin/nvcc...not found Checking for program /opt/cray/xt-asyncpe/5.23/bin/nvcc...not found Checking for program /usr/common/usg/valgrind/3.8.1/bin/nvcc...not found Checking for program /global/homes/m/madams/git-fat/nvcc...not found Checking for program /opt/moab/7.2.3_notcpretry/bin/nvcc...not found Checking for program /opt/moab/7.2.3_notcpretry/sbin/nvcc...not found Checking for program /opt/torque/4.2.3.h5_notcpretry/sbin/nvcc...not found Checking for program /opt/torque/4.2.3.h5_notcpretry/bin/nvcc...not found Checking for program /opt/cray/eslogin/eswrap/1.0.20-1.010102.662.0/bin/nvcc...not found Checking for program /opt/modules/3.2.6.7/bin/nvcc...not found Checking for program /usr/syscom/nsg/sbin/nvcc...not found Checking for program /usr/syscom/nsg/bin/nvcc...not found Checking for program /opt/modules/3.2.6.6/bin/nvcc...not found Checking for program /usr/lpp/mmfs/bin/nvcc...not found Checking for program /usr/local/bin/nvcc...not found Checking for program /usr/bin/nvcc...not found Checking for program /bin/nvcc...not found Checking for program /usr/bin/X11/nvcc...not found Checking for program /usr/X11R6/bin/nvcc...not found Checking for program /usr/games/nvcc...not found Checking for program /usr/lib64/jvm/jre/bin/nvcc...not found Checking for program /usr/lib/mit/bin/nvcc...not found Checking for program /usr/lib/mit/sbin/nvcc...not found Checking for program /usr/lib/qt3/bin/nvcc...not found Checking for program /opt/cray/bin/nvcc...not found Checking for program /global/homes/m/madams/nvcc...not found Checking for program /global/homes/m/madams/petsc_maint/bin/win32fe/nvcc...not found ================================================================================ TEST checkCUDAPreprocessor from config.setCompilers(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/setCompilers.py:632) TESTING: checkCUDAPreprocessor from config.setCompilers(config/BuildSystem/config/setCompilers.py:632) Locate a functional CUDA preprocessor ================================================================================ TEST checkCxxCompiler from config.setCompilers(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/setCompilers.py:735) TESTING: checkCxxCompiler from config.setCompilers(config/BuildSystem/config/setCompilers.py:735) Locate a functional Cxx compiler Checking for program /usr/common/usg/darshan/2.2.6/bin/CC...not found Checking for program /scratch/altd/1.0/bin/CC...not found Checking for program /usr/common/usg/bin/CC...not found Checking for program /usr/common/mss/bin/CC...not found Checking for program /usr/common/nsg/bin/CC...not found Checking for program /global/common/carver/usg/matlab/R2012a/bin/CC...not found Checking for program /opt/cray/netcdf/4.3.0/bin/CC...not found Checking for program /opt/cray/hdf5/1.8.11/bin/CC...not found Checking for program /usr/common/usg/allineatools/4.2-34404/bin/CC...not found Checking for program /usr/common/usg/ipm/2.00/bin/CC...not found Checking for program /opt/cray/papi/5.1.2/perf_events/no-cuda/bin/CC...not found Checking for program /usr/common/graphics/visit/bin/CC...not found Checking for program /usr/common/usg/cmake/2.8.10.1/bin/CC...not found Checking for program /opt/cray/atp/1.7.0/bin/CC...not found Checking for program /opt/cray/switch/1.0-1.0402.45840.2.63.gem/bin/CC...not found Checking for program /opt/cray/shared-root/1.0-1.0402.46893.3.17.gem/bin/CC...not found Checking for program /opt/cray/pdsh/2.26-1.0402.45278.1.1.gem/bin/CC...not found Checking for program /opt/cray/nodehealth/5.1-1.0402.45895.3.76.gem/bin/CC...not found Checking for program /opt/cray/lbcd/2.1-1.0402.45245.1.2.gem/bin/CC...not found Checking for program /opt/cray/hosts/1.0-1.0402.45251.1.86.gem/bin/CC...not found Checking for program /opt/cray/configuration/1.0-1.0402.45284.1.2.gem/bin/CC...not found Checking for program /opt/cray/ccm/default/sbin/CC...not found Checking for program /opt/cray/ccm/default/bin/CC...not found Checking for program /opt/cray/audit/1.0.0-1.0402.45273.1.86.gem/bin/CC...not found Checking for program /opt/cray/rca/1.0.0-2.0402.47290.7.1.gem/bin/CC...not found Checking for program /opt/cray/csa/3.0.0-1_2.0402.45268.1.90.gem/sbin/CC...not found Checking for program /opt/cray/csa/3.0.0-1_2.0402.45268.1.90.gem/bin/CC...not found Checking for program /opt/cray/job/1.5.5-0.1_2.0402.45272.1.5.gem/bin/CC...not found Checking for program /opt/cray/xpmem/0.1-2.0402.45248.1.5.gem/bin/CC...not found Checking for program /opt/cray/dmapp/4.0.1-1.0402.7784.4.1.gem/bin/CC...not found Checking for program /opt/cray/pmi/4.0.1-1.0000.9753.86.3.gem/bin/CC...not found Checking for program /opt/cray/ugni/5.0-1.0402.7551.1.10.gem/bin/CC...not found Checking for program /opt/cray/udreg/2.3.2-1.0402.7546.1.5.gem/bin/CC...not found Checking for program /opt/gcc/4.8.1/bin/CC...not found Checking for program /opt/cray/xt-asyncpe/5.23/bin/CC...found Defined make macro "CXX" to "CC" Pushing language Cxx sh: CC -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.cc Executing: CC -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.cc sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } sh: CC -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.cc Executing: CC -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.cc sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language C Popping language C Pushing language CUDA Popping language CUDA Pushing language Cxx Popping language Cxx Pushing language FC Popping language FC Pushing language CXX Popping language CXX sh: CC -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o Executing: CC -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded output: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Pushing language CXX Popping language CXX in CC -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } sh: CC -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.cc Executing: CC -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.cc sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language CXX Popping language CXX sh: CC -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o Executing: CC -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded output: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Pushing language CXX Popping language CXX in CC -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Executing: /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest sh: /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest Executing: /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest sh: Popping language Cxx ================================================================================ TEST checkCxxPreprocessor from config.setCompilers(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/setCompilers.py:773) TESTING: checkCxxPreprocessor from config.setCompilers(config/BuildSystem/config/setCompilers.py:773) Locate a functional Cxx preprocessor Checking for program /usr/common/usg/darshan/2.2.6/bin/CC...not found Checking for program /scratch/altd/1.0/bin/CC...not found Checking for program /usr/common/usg/bin/CC...not found Checking for program /usr/common/mss/bin/CC...not found Checking for program /usr/common/nsg/bin/CC...not found Checking for program /global/common/carver/usg/matlab/R2012a/bin/CC...not found Checking for program /opt/cray/netcdf/4.3.0/bin/CC...not found Checking for program /opt/cray/hdf5/1.8.11/bin/CC...not found Checking for program /usr/common/usg/allineatools/4.2-34404/bin/CC...not found Checking for program /usr/common/usg/ipm/2.00/bin/CC...not found Checking for program /opt/cray/papi/5.1.2/perf_events/no-cuda/bin/CC...not found Checking for program /usr/common/graphics/visit/bin/CC...not found Checking for program /usr/common/usg/cmake/2.8.10.1/bin/CC...not found Checking for program /opt/cray/atp/1.7.0/bin/CC...not found Checking for program /opt/cray/switch/1.0-1.0402.45840.2.63.gem/bin/CC...not found Checking for program /opt/cray/shared-root/1.0-1.0402.46893.3.17.gem/bin/CC...not found Checking for program /opt/cray/pdsh/2.26-1.0402.45278.1.1.gem/bin/CC...not found Checking for program /opt/cray/nodehealth/5.1-1.0402.45895.3.76.gem/bin/CC...not found Checking for program /opt/cray/lbcd/2.1-1.0402.45245.1.2.gem/bin/CC...not found Checking for program /opt/cray/hosts/1.0-1.0402.45251.1.86.gem/bin/CC...not found Checking for program /opt/cray/configuration/1.0-1.0402.45284.1.2.gem/bin/CC...not found Checking for program /opt/cray/ccm/default/sbin/CC...not found Checking for program /opt/cray/ccm/default/bin/CC...not found Checking for program /opt/cray/audit/1.0.0-1.0402.45273.1.86.gem/bin/CC...not found Checking for program /opt/cray/rca/1.0.0-2.0402.47290.7.1.gem/bin/CC...not found Checking for program /opt/cray/csa/3.0.0-1_2.0402.45268.1.90.gem/sbin/CC...not found Checking for program /opt/cray/csa/3.0.0-1_2.0402.45268.1.90.gem/bin/CC...not found Checking for program /opt/cray/job/1.5.5-0.1_2.0402.45272.1.5.gem/bin/CC...not found Checking for program /opt/cray/xpmem/0.1-2.0402.45248.1.5.gem/bin/CC...not found Checking for program /opt/cray/dmapp/4.0.1-1.0402.7784.4.1.gem/bin/CC...not found Checking for program /opt/cray/pmi/4.0.1-1.0000.9753.86.3.gem/bin/CC...not found Checking for program /opt/cray/ugni/5.0-1.0402.7551.1.10.gem/bin/CC...not found Checking for program /opt/cray/udreg/2.3.2-1.0402.7546.1.5.gem/bin/CC...not found Checking for program /opt/gcc/4.8.1/bin/CC...not found Checking for program /opt/cray/xt-asyncpe/5.23/bin/CC...found Defined make macro "CXXCPP" to "CC -E" Pushing language Cxx sh: CC -E -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.cc Executing: CC -E -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.cc sh: # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.cc" # 1 "" # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.cc" # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/confdefs.h" 1 # 2 "/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.cc" 2 # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conffix.h" 1 extern "C" { } # 3 "/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.cc" 2 # 1 "/opt/gcc/4.8.1/snos/include/g++/cstdlib" 1 3 # 39 "/opt/gcc/4.8.1/snos/include/g++/cstdlib" 3 # 40 "/opt/gcc/4.8.1/snos/include/g++/cstdlib" 3 # 1 "/opt/gcc/4.8.1/snos/include/g++/x86_64-suse-linux/bits/c++config.h" 1 3 # 178 "/opt/gcc/4.8.1/snos/include/g++/x86_64-suse-linux/bits/c++config.h" 3 namespace std { typedef long unsigned int size_t; typedef long int ptrdiff_t; } # 420 "/opt/gcc/4.8.1/snos/include/g++/x86_64-suse-linux/bits/c++config.h" 3 # 1 "/opt/gcc/4.8.1/snos/include/g++/x86_64-suse-linux/bits/os_defines.h" 1 3 # 39 "/opt/gcc/4.8.1/snos/include/g++/x86_64-suse-linux/bits/os_defines.h" 3 # 1 "/opt/cray/xe-sysroot/4.2.34/usr/include/features.h" 1 3 4 # 347 "/opt/cray/xe-sysroot/4.2.34/usr/include/features.h" 3 4 # 1 "/opt/cray/xe-sysroot/4.2.34/usr/include/sys/cdefs.h" 1 3 4 # 353 "/opt/cray/xe-sysroot/4.2.34/usr/include/sys/cdefs.h" 3 4 # 1 "/opt/cray/xe-sysroot/4.2.34/usr/include/bits/wordsize.h" 1 3 4 # 354 "/opt/cray/xe-sysroot/4.2.34/usr/include/sys/cdefs.h" 2 3 4 # 348 "/opt/cray/xe-sysroot/4.2.34/usr/include/features.h" 2 3 4 # 371 "/opt/cray/xe-sysroot/4.2.34/usr/include/features.h" 3 4 # 1 "/opt/cray/xe-sysroot/4.2.34/usr/include/gnu/stubs.h" 1 3 4 # 1 "/opt/cray/xe-sysroot/4.2.34/usr/include/bits/wordsize.h" 1 3 4 # 5 "/opt/cray/xe-sysroot/4.2.34/usr/include/gnu/stubs.h" 2 3 4 # 1 "/opt/cray/xe-sysroot/4.2.34/usr/include/gnu/stubs-64.h" 1 3 4 # 10 "/opt/cray/xe-sysroot/4.2.34/usr/include/gnu/stubs.h" 2 3 4 # 372 "/opt/cray/xe-sysroot/4.2.34/usr/include/features.h" 2 3 4 # 40 "/opt/gcc/4.8.1/snos/include/g++/x86_64-suse-linux/bits/os_defines.h" 2 3 # 421 "/opt/gcc/4.8.1/snos/include/g++/x86_64-suse-linux/bits/c++config.h" 2 3 # 1 "/opt/gcc/4.8.1/snos/include/g++/x86_64-suse-linux/bits/cpu_defines.h" 1 3 # 424 "/opt/gcc/4.8.1/snos/include/g++/x86_64-suse-linux/bits/c++config.h" 2 3 # 42 "/opt/gcc/4.8.1/snos/include/g++/cstdlib" 2 3 # 72 "/opt/gcc/4.8.1/snos/include/g++/cstdlib" 3 # 1 "/opt/cray/xe-sysroot/4.2.34/usr/include/stdlib.h" 1 3 4 # 33 "/opt/cray/xe-sysroot/4.2.34/usr/include/stdlib.h" 3 4 # 1 "/opt/gcc/4.8.1/snos/lib/gcc/x86_64-suse-linux/4.8.1/include/stddef.h" 1 3 4 # 212 "/opt/gcc/4.8.1/snos/lib/gcc/x86_64-suse-linux/4.8.1/include/stddef.h" 3 4 typedef long unsigned int size_t; # 34 "/opt/cray/xe-sysroot/4.2.34/usr/include/stdlib.h" 2 3 4 extern "C" { # 1 "/opt/cray/xe-sysroot/4.2.34/usr/include/bits/waitflags.h" 1 3 4 # 43 "/opt/cray/xe-sysroot/4.2.34/usr/include/stdlib.h" 2 3 4 # 1 "/opt/cray/xe-sysroot/4.2.34/usr/include/bits/waitstatus.h" 1 3 4 # 65 "/opt/cray/xe-sysroot/4.2.34/usr/include/bits/waitstatus.h" 3 4 # 1 "/opt/cray/xe-sysroot/4.2.34/usr/include/endian.h" 1 3 4 # 37 "/opt/cray/xe-sysroot/4.2.34/usr/include/endian.h" 3 4 # 1 "/opt/cray/xe-sysroot/4.2.34/usr/include/bits/endian.h" 1 3 4 # 38 "/opt/cray/xe-sysroot/4.2.34/usr/include/endian.h" 2 3 4 # 61 "/opt/cray/xe-sysroot/4.2.34/usr/include/endian.h" 3 4 # 1 "/opt/cray/xe-sysroot/4.2.34/usr/include/bits/byteswap.h" 1 3 4 # 28 "/opt/cray/xe-sysroot/4.2.34/usr/include/bits/byteswap.h" 3 4 # 1 "/opt/cray/xe-sysroot/4.2.34/usr/include/bits/wordsize.h" 1 3 4 # 29 "/opt/cray/xe-sysroot/4.2.34/usr/include/bits/byteswap.h" 2 3 4 # 62 "/opt/cray/xe-sysroot/4.2.34/usr/include/endian.h" 2 3 4 # 66 "/opt/cray/xe-sysroot/4.2.34/usr/include/bits/waitstatus.h" 2 3 4 union wait { int w_status; struct { unsigned int __w_termsig:7; unsigned int __w_coredump:1; unsigned int __w_retcode:8; unsigned int:16; } __wait_terminated; struct { unsigned int __w_stopval:8; unsigned int __w_stopsig:8; unsigned int:16; } __wait_stopped; }; # 44 "/opt/cray/xe-sysroot/4.2.34/usr/include/stdlib.h" 2 3 4 # 96 "/opt/cray/xe-sysroot/4.2.34/usr/include/stdlib.h" 3 4 typedef struct { int quot; int rem; } div_t; typedef struct { long int quot; long int rem; } ldiv_t; __extension__ typedef struct { long long int quot; long long int rem; } lldiv_t; # 140 "/opt/cray/xe-sysroot/4.2.34/usr/include/stdlib.h" 3 4 extern size_t __ctype_get_mb_cur_max (void) throw () ; extern double atof (__const char *__nptr) throw () __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1))) ; extern int atoi (__const char *__nptr) throw () __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1))) ; extern long int atol (__const char *__nptr) throw () __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1))) ; __extension__ extern long long int atoll (__const char *__nptr) throw () __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1))) ; extern double strtod (__const char *__restrict __nptr, char **__restrict __endptr) throw () __attribute__ ((__nonnull__ (1))) ; extern float strtof (__const char *__restrict __nptr, char **__restrict __endptr) throw () __attribute__ ((__nonnull__ (1))) ; extern long double strtold (__const char *__restrict __nptr, char **__restrict __endptr) throw () __attribute__ ((__nonnull__ (1))) ; extern long int strtol (__const char *__restrict __nptr, char **__restrict __endptr, int __base) throw () __attribute__ ((__nonnull__ (1))) ; extern unsigned long int strtoul (__const char *__restrict __nptr, char **__restrict __endptr, int __base) throw () __attribute__ ((__nonnull__ (1))) ; __extension__ extern long long int strtoq (__const char *__restrict __nptr, char **__restrict __endptr, int __base) throw () __attribute__ ((__nonnull__ (1))) ; __extension__ extern unsigned long long int strtouq (__const char *__restrict __nptr, char **__restrict __endptr, int __base) throw () __attribute__ ((__nonnull__ (1))) ; __extension__ extern long long int strtoll (__const char *__restrict __nptr, char **__restrict __endptr, int __base) throw () __attribute__ ((__nonnull__ (1))) ; __extension__ extern unsigned long long int strtoull (__const char *__restrict __nptr, char **__restrict __endptr, int __base) throw () __attribute__ ((__nonnull__ (1))) ; # 236 "/opt/cray/xe-sysroot/4.2.34/usr/include/stdlib.h" 3 4 # 1 "/opt/cray/xe-sysroot/4.2.34/usr/include/xlocale.h" 1 3 4 # 28 "/opt/cray/xe-sysroot/4.2.34/usr/include/xlocale.h" 3 4 typedef struct __locale_struct { struct locale_data *__locales[13]; const unsigned short int *__ctype_b; const int *__ctype_tolower; const int *__ctype_toupper; const char *__names[13]; } *__locale_t; typedef __locale_t locale_t; # 237 "/opt/cray/xe-sysroot/4.2.34/usr/include/stdlib.h" 2 3 4 extern long int strtol_l (__const char *__restrict __nptr, char **__restrict __endptr, int __base, __locale_t __loc) throw () __attribute__ ((__nonnull__ (1, 4))) ; extern unsigned long int strtoul_l (__const char *__restrict __nptr, char **__restrict __endptr, int __base, __locale_t __loc) throw () __attribute__ ((__nonnull__ (1, 4))) ; __extension__ extern long long int strtoll_l (__const char *__restrict __nptr, char **__restrict __endptr, int __base, __locale_t __loc) throw () __attribute__ ((__nonnull__ (1, 4))) ; __extension__ extern unsigned long long int strtoull_l (__const char *__restrict __nptr, char **__restrict __endptr, int __base, __locale_t __loc) throw () __attribute__ ((__nonnull__ (1, 4))) ; extern double strtod_l (__const char *__restrict __nptr, char **__restrict __endptr, __locale_t __loc) throw () __attribute__ ((__nonnull__ (1, 3))) ; extern float strtof_l (__const char *__restrict __nptr, char **__restrict __endptr, __locale_t __loc) throw () __attribute__ ((__nonnull__ (1, 3))) ; extern long double strtold_l (__const char *__restrict __nptr, char **__restrict __endptr, __locale_t __loc) throw () __attribute__ ((__nonnull__ (1, 3))) ; # 311 "/opt/cray/xe-sysroot/4.2.34/usr/include/stdlib.h" 3 4 extern char *l64a (long int __n) throw () ; extern long int a64l (__const char *__s) throw () __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1))) ; # 1 "/opt/cray/xe-sysroot/4.2.34/usr/include/sys/types.h" 1 3 4 # 29 "/opt/cray/xe-sysroot/4.2.34/usr/include/sys/types.h" 3 4 extern "C" { # 1 "/opt/cray/xe-sysroot/4.2.34/usr/include/bits/types.h" 1 3 4 # 28 "/opt/cray/xe-sysroot/4.2.34/usr/include/bits/types.h" 3 4 # 1 "/opt/cray/xe-sysroot/4.2.34/usr/include/bits/wordsize.h" 1 3 4 # 29 "/opt/cray/xe-sysroot/4.2.34/usr/include/bits/types.h" 2 3 4 typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; # 131 "/opt/cray/xe-sysroot/4.2.34/usr/include/bits/types.h" 3 4 # 1 "/opt/cray/xe-sysroot/4.2.34/usr/include/bits/typesizes.h" 1 3 4 # 132 "/opt/cray/xe-sysroot/4.2.34/usr/include/bits/types.h" 2 3 4 typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned long int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef long int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; # 32 "/opt/cray/xe-sysroot/4.2.34/usr/include/sys/types.h" 2 3 4 typedef __u_char u_char; typedef __u_short u_short; typedef __u_int u_int; typedef __u_long u_long; typedef __quad_t quad_t; typedef __u_quad_t u_quad_t; typedef __fsid_t fsid_t; typedef __loff_t loff_t; typedef __ino_t ino_t; typedef __ino64_t ino64_t; typedef __dev_t dev_t; typedef __gid_t gid_t; typedef __mode_t mode_t; typedef __nlink_t nlink_t; typedef __uid_t uid_t; typedef __off_t off_t; typedef __off64_t off64_t; typedef __pid_t pid_t; typedef __id_t id_t; typedef __ssize_t ssize_t; typedef __daddr_t daddr_t; typedef __caddr_t caddr_t; typedef __key_t key_t; # 133 "/opt/cray/xe-sysroot/4.2.34/usr/include/sys/types.h" 3 4 # 1 "/opt/cray/xe-sysroot/4.2.34/usr/include/time.h" 1 3 4 # 58 "/opt/cray/xe-sysroot/4.2.34/usr/include/time.h" 3 4 typedef __clock_t clock_t; # 74 "/opt/cray/xe-sysroot/4.2.34/usr/include/time.h" 3 4 typedef __time_t time_t; # 92 "/opt/cray/xe-sysroot/4.2.34/usr/include/time.h" 3 4 typedef __clockid_t clockid_t; # 104 "/opt/cray/xe-sysroot/4.2.34/usr/include/time.h" 3 4 typedef __timer_t timer_t; # 134 "/opt/cray/xe-sysroot/4.2.34/usr/include/sys/types.h" 2 3 4 typedef __useconds_t useconds_t; typedef __suseconds_t suseconds_t; # 1 "/opt/gcc/4.8.1/snos/lib/gcc/x86_64-suse-linux/4.8.1/include/stddef.h" 1 3 4 # 148 "/opt/cray/xe-sysroot/4.2.34/usr/include/sys/types.h" 2 3 4 typedef unsigned long int ulong; typedef unsigned short int ushort; typedef unsigned int uint; # 195 "/opt/cray/xe-sysroot/4.2.34/usr/include/sys/types.h" 3 4 typedef int int8_t __attribute__ ((__mode__ (__QI__))); typedef int int16_t __attribute__ ((__mode__ (__HI__))); typedef int int32_t __attribute__ ((__mode__ (__SI__))); typedef int int64_t __attribute__ ((__mode__ (__DI__))); typedef unsigned int u_int8_t __attribute__ ((__mode__ (__QI__))); typedef unsigned int u_int16_t __attribute__ ((__mode__ (__HI__))); typedef unsigned int u_int32_t __attribute__ ((__mode__ (__SI__))); typedef unsigned int u_int64_t __attribute__ ((__mode__ (__DI__))); typedef int register_t __attribute__ ((__mode__ (__word__))); # 220 "/opt/cray/xe-sysroot/4.2.34/usr/include/sys/types.h" 3 4 # 1 "/opt/cray/xe-sysroot/4.2.34/usr/include/sys/select.h" 1 3 4 # 31 "/opt/cray/xe-sysroot/4.2.34/usr/include/sys/select.h" 3 4 # 1 "/opt/cray/xe-sysroot/4.2.34/usr/include/bits/select.h" 1 3 4 # 23 "/opt/cray/xe-sysroot/4.2.34/usr/include/bits/select.h" 3 4 # 1 "/opt/cray/xe-sysroot/4.2.34/usr/include/bits/wordsize.h" 1 3 4 # 24 "/opt/cray/xe-sysroot/4.2.34/usr/include/bits/select.h" 2 3 4 # 32 "/opt/cray/xe-sysroot/4.2.34/usr/include/sys/select.h" 2 3 4 # 1 "/opt/cray/xe-sysroot/4.2.34/usr/include/bits/sigset.h" 1 3 4 # 24 "/opt/cray/xe-sysroot/4.2.34/usr/include/bits/sigset.h" 3 4 typedef int __sig_atomic_t; typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; # 35 "/opt/cray/xe-sysroot/4.2.34/usr/include/sys/select.h" 2 3 4 typedef __sigset_t sigset_t; # 1 "/opt/cray/xe-sysroot/4.2.34/usr/include/time.h" 1 3 4 # 120 "/opt/cray/xe-sysroot/4.2.34/usr/include/time.h" 3 4 struct timespec { __time_t tv_sec; long int tv_nsec; }; # 45 "/opt/cray/xe-sysroot/4.2.34/usr/include/sys/select.h" 2 3 4 # 1 "/opt/cray/xe-sysroot/4.2.34/usr/include/bits/time.h" 1 3 4 # 69 "/opt/cray/xe-sysroot/4.2.34/usr/include/bits/time.h" 3 4 struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; # 47 "/opt/cray/xe-sysroot/4.2.34/usr/include/sys/select.h" 2 3 4 # 55 "/opt/cray/xe-sysroot/4.2.34/usr/include/sys/select.h" 3 4 typedef long int __fd_mask; # 67 "/opt/cray/xe-sysroot/4.2.34/usr/include/sys/select.h" 3 4 typedef struct { __fd_mask fds_bits[1024 / (8 * (int) sizeof (__fd_mask))]; } fd_set; typedef __fd_mask fd_mask; # 99 "/opt/cray/xe-sysroot/4.2.34/usr/include/sys/select.h" 3 4 extern "C" { # 109 "/opt/cray/xe-sysroot/4.2.34/usr/include/sys/select.h" 3 4 extern int select (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, struct timeval *__restrict __timeout); # 121 "/opt/cray/xe-sysroot/4.2.34/usr/include/sys/select.h" 3 4 extern int pselect (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, const struct timespec *__restrict __timeout, const __sigset_t *__restrict __sigmask); } # 221 "/opt/cray/xe-sysroot/4.2.34/usr/include/sys/types.h" 2 3 4 # 1 "/opt/cray/xe-sysroot/4.2.34/usr/include/sys/sysmacros.h" 1 3 4 # 30 "/opt/cray/xe-sysroot/4.2.34/usr/include/sys/sysmacros.h" 3 4 __extension__ extern unsigned int gnu_dev_major (unsigned long long int __dev) throw (); __extension__ extern unsigned int gnu_dev_minor (unsigned long long int __dev) throw (); __extension__ extern unsigned long long int gnu_dev_makedev (unsigned int __major, unsigned int __minor) throw (); # 224 "/opt/cray/xe-sysroot/4.2.34/usr/include/sys/types.h" 2 3 4 typedef __blksize_t blksize_t; typedef __blkcnt_t blkcnt_t; typedef __fsblkcnt_t fsblkcnt_t; typedef __fsfilcnt_t fsfilcnt_t; # 262 "/opt/cray/xe-sysroot/4.2.34/usr/include/sys/types.h" 3 4 typedef __blkcnt64_t blkcnt64_t; typedef __fsblkcnt64_t fsblkcnt64_t; typedef __fsfilcnt64_t fsfilcnt64_t; # 1 "/opt/cray/xe-sysroot/4.2.34/usr/include/bits/pthreadtypes.h" 1 3 4 # 23 "/opt/cray/xe-sysroot/4.2.34/usr/include/bits/pthreadtypes.h" 3 4 # 1 "/opt/cray/xe-sysroot/4.2.34/usr/include/bits/wordsize.h" 1 3 4 # 24 "/opt/cray/xe-sysroot/4.2.34/usr/include/bits/pthreadtypes.h" 2 3 4 # 50 "/opt/cray/xe-sysroot/4.2.34/usr/include/bits/pthreadtypes.h" 3 4 typedef unsigned long int pthread_t; typedef union { char __size[56]; long int __align; } pthread_attr_t; typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; # 76 "/opt/cray/xe-sysroot/4.2.34/usr/include/bits/pthreadtypes.h" 3 4 typedef union { struct __pthread_mutex_s { int __lock; unsigned int __count; int __owner; unsigned int __nusers; int __kind; int __spins; __pthread_list_t __list; # 101 "/opt/cray/xe-sysroot/4.2.34/usr/include/bits/pthreadtypes.h" 3 4 } __data; char __size[40]; long int __align; } pthread_mutex_t; typedef union { char __size[4]; int __align; } pthread_mutexattr_t; typedef union { struct { int __lock; unsigned int __futex; __extension__ unsigned long long int __total_seq; __extension__ unsigned long long int __wakeup_seq; __extension__ unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; __extension__ long long int __align; } pthread_cond_t; typedef union { char __size[4]; int __align; } pthread_condattr_t; typedef unsigned int pthread_key_t; typedef int pthread_once_t; typedef union { struct { int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; unsigned int __flags; } __data; # 187 "/opt/cray/xe-sysroot/4.2.34/usr/include/bits/pthreadtypes.h" 3 4 char __size[56]; long int __align; } pthread_rwlock_t; typedef union { char __size[8]; long int __align; } pthread_rwlockattr_t; typedef volatile int pthread_spinlock_t; typedef union { char __size[32]; long int __align; } pthread_barrier_t; typedef union { char __size[4]; int __align; } pthread_barrierattr_t; # 271 "/opt/cray/xe-sysroot/4.2.34/usr/include/sys/types.h" 2 3 4 } # 321 "/opt/cray/xe-sysroot/4.2.34/usr/include/stdlib.h" 2 3 4 extern long int random (void) throw (); extern void srandom (unsigned int __seed) throw (); extern char *initstate (unsigned int __seed, char *__statebuf, size_t __statelen) throw () __attribute__ ((__nonnull__ (2))); extern char *setstate (char *__statebuf) throw () __attribute__ ((__nonnull__ (1))); struct random_data { int32_t *fptr; int32_t *rptr; int32_t *state; int rand_type; int rand_deg; int rand_sep; int32_t *end_ptr; }; extern int random_r (struct random_data *__restrict __buf, int32_t *__restrict __result) throw () __attribute__ ((__nonnull__ (1, 2))); extern int srandom_r (unsigned int __seed, struct random_data *__buf) throw () __attribute__ ((__nonnull__ (2))); extern int initstate_r (unsigned int __seed, char *__restrict __statebuf, size_t __statelen, struct random_data *__restrict __buf) throw () __attribute__ ((__nonnull__ (2, 4))); extern int setstate_r (char *__restrict __statebuf, struct random_data *__restrict __buf) throw () __attribute__ ((__nonnull__ (1, 2))); extern int rand (void) throw (); extern void srand (unsigned int __seed) throw (); extern int rand_r (unsigned int *__seed) throw (); extern double drand48 (void) throw (); extern double erand48 (unsigned short int __xsubi[3]) throw () __attribute__ ((__nonnull__ (1))); extern long int lrand48 (void) throw (); extern long int nrand48 (unsigned short int __xsubi[3]) throw () __attribute__ ((__nonnull__ (1))); extern long int mrand48 (void) throw (); extern long int jrand48 (unsigned short int __xsubi[3]) throw () __attribute__ ((__nonnull__ (1))); extern void srand48 (long int __seedval) throw (); extern unsigned short int *seed48 (unsigned short int __seed16v[3]) throw () __attribute__ ((__nonnull__ (1))); extern void lcong48 (unsigned short int __param[7]) throw () __attribute__ ((__nonnull__ (1))); struct drand48_data { unsigned short int __x[3]; unsigned short int __old_x[3]; unsigned short int __c; unsigned short int __init; unsigned long long int __a; }; extern int drand48_r (struct drand48_data *__restrict __buffer, double *__restrict __result) throw () __attribute__ ((__nonnull__ (1, 2))); extern int erand48_r (unsigned short int __xsubi[3], struct drand48_data *__restrict __buffer, double *__restrict __result) throw () __attribute__ ((__nonnull__ (1, 2))); extern int lrand48_r (struct drand48_data *__restrict __buffer, long int *__restrict __result) throw () __attribute__ ((__nonnull__ (1, 2))); extern int nrand48_r (unsigned short int __xsubi[3], struct drand48_data *__restrict __buffer, long int *__restrict __result) throw () __attribute__ ((__nonnull__ (1, 2))); extern int mrand48_r (struct drand48_data *__restrict __buffer, long int *__restrict __result) throw () __attribute__ ((__nonnull__ (1, 2))); extern int jrand48_r (unsigned short int __xsubi[3], struct drand48_data *__restrict __buffer, long int *__restrict __result) throw () __attribute__ ((__nonnull__ (1, 2))); extern int srand48_r (long int __seedval, struct drand48_data *__buffer) throw () __attribute__ ((__nonnull__ (2))); extern int seed48_r (unsigned short int __seed16v[3], struct drand48_data *__buffer) throw () __attribute__ ((__nonnull__ (1, 2))); extern int lcong48_r (unsigned short int __param[7], struct drand48_data *__buffer) throw () __attribute__ ((__nonnull__ (1, 2))); extern void *malloc (size_t __size) throw () __attribute__ ((__malloc__)) ; extern void *calloc (size_t __nmemb, size_t __size) throw () __attribute__ ((__malloc__)) ; extern void *realloc (void *__ptr, size_t __size) throw () __attribute__ ((__warn_unused_result__)); extern void free (void *__ptr) throw (); extern void cfree (void *__ptr) throw (); # 1 "/opt/cray/xe-sysroot/4.2.34/usr/include/alloca.h" 1 3 4 # 25 "/opt/cray/xe-sysroot/4.2.34/usr/include/alloca.h" 3 4 # 1 "/opt/gcc/4.8.1/snos/lib/gcc/x86_64-suse-linux/4.8.1/include/stddef.h" 1 3 4 # 26 "/opt/cray/xe-sysroot/4.2.34/usr/include/alloca.h" 2 3 4 extern "C" { extern void *alloca (size_t __size) throw (); } # 498 "/opt/cray/xe-sysroot/4.2.34/usr/include/stdlib.h" 2 3 4 extern void *valloc (size_t __size) throw () __attribute__ ((__malloc__)) ; extern int posix_memalign (void **__memptr, size_t __alignment, size_t __size) throw () __attribute__ ((__nonnull__ (1))) ; extern void abort (void) throw () __attribute__ ((__noreturn__)); extern int atexit (void (*__func) (void)) throw () __attribute__ ((__nonnull__ (1))); extern "C++" int at_quick_exit (void (*__func) (void)) throw () __asm ("at_quick_exit") __attribute__ ((__nonnull__ (1))); extern int on_exit (void (*__func) (int __status, void *__arg), void *__arg) throw () __attribute__ ((__nonnull__ (1))); extern void exit (int __status) throw () __attribute__ ((__noreturn__)); extern void quick_exit (int __status) throw () __attribute__ ((__noreturn__)); extern void _Exit (int __status) throw () __attribute__ ((__noreturn__)); extern char *getenv (__const char *__name) throw () __attribute__ ((__nonnull__ (1))) ; extern char *__secure_getenv (__const char *__name) throw () __attribute__ ((__nonnull__ (1))) ; extern int putenv (char *__string) throw () __attribute__ ((__nonnull__ (1))); extern int setenv (__const char *__name, __const char *__value, int __replace) throw () __attribute__ ((__nonnull__ (2))); extern int unsetenv (__const char *__name) throw (); extern int clearenv (void) throw (); # 604 "/opt/cray/xe-sysroot/4.2.34/usr/include/stdlib.h" 3 4 extern char *mktemp (char *__template) throw () __attribute__ ((__nonnull__ (1))) ; # 615 "/opt/cray/xe-sysroot/4.2.34/usr/include/stdlib.h" 3 4 extern int mkstemp (char *__template) __attribute__ ((__nonnull__ (1))) ; # 625 "/opt/cray/xe-sysroot/4.2.34/usr/include/stdlib.h" 3 4 extern int mkstemp64 (char *__template) __attribute__ ((__nonnull__ (1))) ; # 637 "/opt/cray/xe-sysroot/4.2.34/usr/include/stdlib.h" 3 4 extern int mkstemps (char *__template, int __suffixlen) __attribute__ ((__nonnull__ (1))) ; # 647 "/opt/cray/xe-sysroot/4.2.34/usr/include/stdlib.h" 3 4 extern int mkstemps64 (char *__template, int __suffixlen) __attribute__ ((__nonnull__ (1))) ; # 658 "/opt/cray/xe-sysroot/4.2.34/usr/include/stdlib.h" 3 4 extern char *mkdtemp (char *__template) throw () __attribute__ ((__nonnull__ (1))) ; # 669 "/opt/cray/xe-sysroot/4.2.34/usr/include/stdlib.h" 3 4 extern int mkostemp (char *__template, int __flags) __attribute__ ((__nonnull__ (1))) ; # 679 "/opt/cray/xe-sysroot/4.2.34/usr/include/stdlib.h" 3 4 extern int mkostemp64 (char *__template, int __flags) __attribute__ ((__nonnull__ (1))) ; # 689 "/opt/cray/xe-sysroot/4.2.34/usr/include/stdlib.h" 3 4 extern int mkostemps (char *__template, int __suffixlen, int __flags) __attribute__ ((__nonnull__ (1))) ; # 701 "/opt/cray/xe-sysroot/4.2.34/usr/include/stdlib.h" 3 4 extern int mkostemps64 (char *__template, int __suffixlen, int __flags) __attribute__ ((__nonnull__ (1))) ; extern int system (__const char *__command) ; extern char *canonicalize_file_name (__const char *__name) throw () __attribute__ ((__nonnull__ (1))) ; # 729 "/opt/cray/xe-sysroot/4.2.34/usr/include/stdlib.h" 3 4 extern char *realpath (__const char *__restrict __name, char *__restrict __resolved) throw () ; typedef int (*__compar_fn_t) (__const void *, __const void *); typedef __compar_fn_t comparison_fn_t; typedef int (*__compar_d_fn_t) (__const void *, __const void *, void *); extern void *bsearch (__const void *__key, __const void *__base, size_t __nmemb, size_t __size, __compar_fn_t __compar) __attribute__ ((__nonnull__ (1, 2, 5))) ; extern void qsort (void *__base, size_t __nmemb, size_t __size, __compar_fn_t __compar) __attribute__ ((__nonnull__ (1, 4))); extern void qsort_r (void *__base, size_t __nmemb, size_t __size, __compar_d_fn_t __compar, void *__arg) __attribute__ ((__nonnull__ (1, 4))); extern int abs (int __x) throw () __attribute__ ((__const__)) ; extern long int labs (long int __x) throw () __attribute__ ((__const__)) ; __extension__ extern long long int llabs (long long int __x) throw () __attribute__ ((__const__)) ; extern div_t div (int __numer, int __denom) throw () __attribute__ ((__const__)) ; extern ldiv_t ldiv (long int __numer, long int __denom) throw () __attribute__ ((__const__)) ; __extension__ extern lldiv_t lldiv (long long int __numer, long long int __denom) throw () __attribute__ ((__const__)) ; # 802 "/opt/cray/xe-sysroot/4.2.34/usr/include/stdlib.h" 3 4 extern char *ecvt (double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign) throw () __attribute__ ((__nonnull__ (3, 4))) ; extern char *fcvt (double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign) throw () __attribute__ ((__nonnull__ (3, 4))) ; extern char *gcvt (double __value, int __ndigit, char *__buf) throw () __attribute__ ((__nonnull__ (3))) ; extern char *qecvt (long double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign) throw () __attribute__ ((__nonnull__ (3, 4))) ; extern char *qfcvt (long double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign) throw () __attribute__ ((__nonnull__ (3, 4))) ; extern char *qgcvt (long double __value, int __ndigit, char *__buf) throw () __attribute__ ((__nonnull__ (3))) ; extern int ecvt_r (double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign, char *__restrict __buf, size_t __len) throw () __attribute__ ((__nonnull__ (3, 4, 5))); extern int fcvt_r (double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign, char *__restrict __buf, size_t __len) throw () __attribute__ ((__nonnull__ (3, 4, 5))); extern int qecvt_r (long double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign, char *__restrict __buf, size_t __len) throw () __attribute__ ((__nonnull__ (3, 4, 5))); extern int qfcvt_r (long double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign, char *__restrict __buf, size_t __len) throw () __attribute__ ((__nonnull__ (3, 4, 5))); extern int mblen (__const char *__s, size_t __n) throw () ; extern int mbtowc (wchar_t *__restrict __pwc, __const char *__restrict __s, size_t __n) throw () ; extern int wctomb (char *__s, wchar_t __wchar) throw () ; extern size_t mbstowcs (wchar_t *__restrict __pwcs, __const char *__restrict __s, size_t __n) throw (); extern size_t wcstombs (char *__restrict __s, __const wchar_t *__restrict __pwcs, size_t __n) throw (); extern int rpmatch (__const char *__response) throw () __attribute__ ((__nonnull__ (1))) ; # 890 "/opt/cray/xe-sysroot/4.2.34/usr/include/stdlib.h" 3 4 extern int getsubopt (char **__restrict __optionp, char *__const *__restrict __tokens, char **__restrict __valuep) throw () __attribute__ ((__nonnull__ (1, 2, 3))) ; extern void setkey (__const char *__key) throw () __attribute__ ((__nonnull__ (1))); extern int posix_openpt (int __oflag) ; extern int grantpt (int __fd) throw (); extern int unlockpt (int __fd) throw (); extern char *ptsname (int __fd) throw () ; extern int ptsname_r (int __fd, char *__buf, size_t __buflen) throw () __attribute__ ((__nonnull__ (2))); extern int getpt (void); extern int getloadavg (double __loadavg[], int __nelem) throw () __attribute__ ((__nonnull__ (1))); # 958 "/opt/cray/xe-sysroot/4.2.34/usr/include/stdlib.h" 3 4 } # 73 "/opt/gcc/4.8.1/snos/include/g++/cstdlib" 2 3 # 114 "/opt/gcc/4.8.1/snos/include/g++/cstdlib" 3 namespace std __attribute__ ((__visibility__ ("default"))) { using ::div_t; using ::ldiv_t; using ::abort; using ::abs; using ::atexit; using ::atof; using ::atoi; using ::atol; using ::bsearch; using ::calloc; using ::div; using ::exit; using ::free; using ::getenv; using ::labs; using ::ldiv; using ::malloc; using ::mblen; using ::mbstowcs; using ::mbtowc; using ::qsort; using ::rand; using ::realloc; using ::srand; using ::strtod; using ::strtol; using ::strtoul; using ::system; using ::wcstombs; using ::wctomb; inline long abs(long __i) { return __builtin_labs(__i); } inline ldiv_t div(long __i, long __j) { return ldiv(__i, __j); } inline long long abs(long long __x) { return __builtin_llabs (__x); } inline __int128 abs(__int128 __x) { return __x >= 0 ? __x : -__x; } } # 196 "/opt/gcc/4.8.1/snos/include/g++/cstdlib" 3 namespace __gnu_cxx __attribute__ ((__visibility__ ("default"))) { using ::lldiv_t; using ::_Exit; using ::llabs; inline lldiv_t div(long long __n, long long __d) { lldiv_t __q; __q.quot = __n / __d; __q.rem = __n % __d; return __q; } using ::lldiv; # 228 "/opt/gcc/4.8.1/snos/include/g++/cstdlib" 3 using ::atoll; using ::strtoll; using ::strtoull; using ::strtof; using ::strtold; } namespace std { using ::__gnu_cxx::lldiv_t; using ::__gnu_cxx::_Exit; using ::__gnu_cxx::llabs; using ::__gnu_cxx::div; using ::__gnu_cxx::lldiv; using ::__gnu_cxx::atoll; using ::__gnu_cxx::strtof; using ::__gnu_cxx::strtoll; using ::__gnu_cxx::strtoull; using ::__gnu_cxx::strtold; } # 3 "/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.cc" 2 Possible ERROR while running preprocessor: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" #include Popping language Cxx Deleting "CCCPP" Checking for program /usr/common/usg/darshan/2.2.6/bin/CC...not found Checking for program /scratch/altd/1.0/bin/CC...not found Checking for program /usr/common/usg/bin/CC...not found Checking for program /usr/common/mss/bin/CC...not found Checking for program /usr/common/nsg/bin/CC...not found Checking for program /global/common/carver/usg/matlab/R2012a/bin/CC...not found Checking for program /opt/cray/netcdf/4.3.0/bin/CC...not found Checking for program /opt/cray/hdf5/1.8.11/bin/CC...not found Checking for program /usr/common/usg/allineatools/4.2-34404/bin/CC...not found Checking for program /usr/common/usg/ipm/2.00/bin/CC...not found Checking for program /opt/cray/papi/5.1.2/perf_events/no-cuda/bin/CC...not found Checking for program /usr/common/graphics/visit/bin/CC...not found Checking for program /usr/common/usg/cmake/2.8.10.1/bin/CC...not found Checking for program /opt/cray/atp/1.7.0/bin/CC...not found Checking for program /opt/cray/switch/1.0-1.0402.45840.2.63.gem/bin/CC...not found Checking for program /opt/cray/shared-root/1.0-1.0402.46893.3.17.gem/bin/CC...not found Checking for program /opt/cray/pdsh/2.26-1.0402.45278.1.1.gem/bin/CC...not found Checking for program /opt/cray/nodehealth/5.1-1.0402.45895.3.76.gem/bin/CC...not found Checking for program /opt/cray/lbcd/2.1-1.0402.45245.1.2.gem/bin/CC...not found Checking for program /opt/cray/hosts/1.0-1.0402.45251.1.86.gem/bin/CC...not found Checking for program /opt/cray/configuration/1.0-1.0402.45284.1.2.gem/bin/CC...not found Checking for program /opt/cray/ccm/default/sbin/CC...not found Checking for program /opt/cray/ccm/default/bin/CC...not found Checking for program /opt/cray/audit/1.0.0-1.0402.45273.1.86.gem/bin/CC...not found Checking for program /opt/cray/rca/1.0.0-2.0402.47290.7.1.gem/bin/CC...not found Checking for program /opt/cray/csa/3.0.0-1_2.0402.45268.1.90.gem/sbin/CC...not found Checking for program /opt/cray/csa/3.0.0-1_2.0402.45268.1.90.gem/bin/CC...not found Checking for program /opt/cray/job/1.5.5-0.1_2.0402.45272.1.5.gem/bin/CC...not found Checking for program /opt/cray/xpmem/0.1-2.0402.45248.1.5.gem/bin/CC...not found Checking for program /opt/cray/dmapp/4.0.1-1.0402.7784.4.1.gem/bin/CC...not found Checking for program /opt/cray/pmi/4.0.1-1.0000.9753.86.3.gem/bin/CC...not found Checking for program /opt/cray/ugni/5.0-1.0402.7551.1.10.gem/bin/CC...not found Checking for program /opt/cray/udreg/2.3.2-1.0402.7546.1.5.gem/bin/CC...not found Checking for program /opt/gcc/4.8.1/bin/CC...not found Checking for program /opt/cray/xt-asyncpe/5.23/bin/CC...found Defined make macro "CXXCPP" to "CC --use cpp32" Pushing language Cxx sh: CC --use cpp32 -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.cc Executing: CC --use cpp32 -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.cc sh: Possible ERROR while running preprocessor: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded g++: error: cpp32: No such file or directory ret = 256 error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded g++: error: cpp32: No such file or directory } Source: #include "confdefs.h" #include "conffix.h" #include Popping language Cxx Deleting "CCCPP" Checking for program /usr/common/usg/darshan/2.2.6/bin/g++...not found Checking for program /scratch/altd/1.0/bin/g++...not found Checking for program /usr/common/usg/bin/g++...not found Checking for program /usr/common/mss/bin/g++...not found Checking for program /usr/common/nsg/bin/g++...not found Checking for program /global/common/carver/usg/matlab/R2012a/bin/g++...not found Checking for program /opt/cray/netcdf/4.3.0/bin/g++...not found Checking for program /opt/cray/hdf5/1.8.11/bin/g++...not found Checking for program /usr/common/usg/allineatools/4.2-34404/bin/g++...not found Checking for program /usr/common/usg/ipm/2.00/bin/g++...not found Checking for program /opt/cray/papi/5.1.2/perf_events/no-cuda/bin/g++...not found Checking for program /usr/common/graphics/visit/bin/g++...not found Checking for program /usr/common/usg/cmake/2.8.10.1/bin/g++...not found Checking for program /opt/cray/atp/1.7.0/bin/g++...not found Checking for program /opt/cray/switch/1.0-1.0402.45840.2.63.gem/bin/g++...not found Checking for program /opt/cray/shared-root/1.0-1.0402.46893.3.17.gem/bin/g++...not found Checking for program /opt/cray/pdsh/2.26-1.0402.45278.1.1.gem/bin/g++...not found Checking for program /opt/cray/nodehealth/5.1-1.0402.45895.3.76.gem/bin/g++...not found Checking for program /opt/cray/lbcd/2.1-1.0402.45245.1.2.gem/bin/g++...not found Checking for program /opt/cray/hosts/1.0-1.0402.45251.1.86.gem/bin/g++...not found Checking for program /opt/cray/configuration/1.0-1.0402.45284.1.2.gem/bin/g++...not found Checking for program /opt/cray/ccm/default/sbin/g++...not found Checking for program /opt/cray/ccm/default/bin/g++...not found Checking for program /opt/cray/audit/1.0.0-1.0402.45273.1.86.gem/bin/g++...not found Checking for program /opt/cray/rca/1.0.0-2.0402.47290.7.1.gem/bin/g++...not found Checking for program /opt/cray/csa/3.0.0-1_2.0402.45268.1.90.gem/sbin/g++...not found Checking for program /opt/cray/csa/3.0.0-1_2.0402.45268.1.90.gem/bin/g++...not found Checking for program /opt/cray/job/1.5.5-0.1_2.0402.45272.1.5.gem/bin/g++...not found Checking for program /opt/cray/xpmem/0.1-2.0402.45248.1.5.gem/bin/g++...not found Checking for program /opt/cray/dmapp/4.0.1-1.0402.7784.4.1.gem/bin/g++...not found Checking for program /opt/cray/pmi/4.0.1-1.0000.9753.86.3.gem/bin/g++...not found Checking for program /opt/cray/ugni/5.0-1.0402.7551.1.10.gem/bin/g++...not found Checking for program /opt/cray/udreg/2.3.2-1.0402.7546.1.5.gem/bin/g++...not found Checking for program /opt/gcc/4.8.1/bin/g++...found Defined make macro "CXXCPP" to "g++ -E" Pushing language Cxx sh: g++ -E -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.cc Executing: g++ -E -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.cc sh: # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.cc" # 1 "" # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.cc" # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/confdefs.h" 1 # 2 "/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.cc" 2 # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conffix.h" 1 extern "C" { } # 3 "/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.cc" 2 # 1 "/opt/gcc/4.8.1/snos/include/g++/cstdlib" 1 3 # 39 "/opt/gcc/4.8.1/snos/include/g++/cstdlib" 3 # 40 "/opt/gcc/4.8.1/snos/include/g++/cstdlib" 3 # 1 "/opt/gcc/4.8.1/snos/include/g++/x86_64-suse-linux/bits/c++config.h" 1 3 # 178 "/opt/gcc/4.8.1/snos/include/g++/x86_64-suse-linux/bits/c++config.h" 3 namespace std { typedef long unsigned int size_t; typedef long int ptrdiff_t; } # 420 "/opt/gcc/4.8.1/snos/include/g++/x86_64-suse-linux/bits/c++config.h" 3 # 1 "/opt/gcc/4.8.1/snos/include/g++/x86_64-suse-linux/bits/os_defines.h" 1 3 # 39 "/opt/gcc/4.8.1/snos/include/g++/x86_64-suse-linux/bits/os_defines.h" 3 # 1 "/usr/include/features.h" 1 3 4 # 347 "/usr/include/features.h" 3 4 # 1 "/usr/include/sys/cdefs.h" 1 3 4 # 353 "/usr/include/sys/cdefs.h" 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 354 "/usr/include/sys/cdefs.h" 2 3 4 # 348 "/usr/include/features.h" 2 3 4 # 371 "/usr/include/features.h" 3 4 # 1 "/usr/include/gnu/stubs.h" 1 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 5 "/usr/include/gnu/stubs.h" 2 3 4 # 1 "/usr/include/gnu/stubs-64.h" 1 3 4 # 10 "/usr/include/gnu/stubs.h" 2 3 4 # 372 "/usr/include/features.h" 2 3 4 # 40 "/opt/gcc/4.8.1/snos/include/g++/x86_64-suse-linux/bits/os_defines.h" 2 3 # 421 "/opt/gcc/4.8.1/snos/include/g++/x86_64-suse-linux/bits/c++config.h" 2 3 # 1 "/opt/gcc/4.8.1/snos/include/g++/x86_64-suse-linux/bits/cpu_defines.h" 1 3 # 424 "/opt/gcc/4.8.1/snos/include/g++/x86_64-suse-linux/bits/c++config.h" 2 3 # 42 "/opt/gcc/4.8.1/snos/include/g++/cstdlib" 2 3 # 72 "/opt/gcc/4.8.1/snos/include/g++/cstdlib" 3 # 1 "/usr/include/stdlib.h" 1 3 4 # 33 "/usr/include/stdlib.h" 3 4 # 1 "/opt/gcc/4.8.1/snos/lib/gcc/x86_64-suse-linux/4.8.1/include/stddef.h" 1 3 4 # 212 "/opt/gcc/4.8.1/snos/lib/gcc/x86_64-suse-linux/4.8.1/include/stddef.h" 3 4 typedef long unsigned int size_t; # 34 "/usr/include/stdlib.h" 2 3 4 extern "C" { # 1 "/usr/include/bits/waitflags.h" 1 3 4 # 43 "/usr/include/stdlib.h" 2 3 4 # 1 "/usr/include/bits/waitstatus.h" 1 3 4 # 65 "/usr/include/bits/waitstatus.h" 3 4 # 1 "/usr/include/endian.h" 1 3 4 # 37 "/usr/include/endian.h" 3 4 # 1 "/usr/include/bits/endian.h" 1 3 4 # 38 "/usr/include/endian.h" 2 3 4 # 61 "/usr/include/endian.h" 3 4 # 1 "/usr/include/bits/byteswap.h" 1 3 4 # 28 "/usr/include/bits/byteswap.h" 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 29 "/usr/include/bits/byteswap.h" 2 3 4 # 62 "/usr/include/endian.h" 2 3 4 # 66 "/usr/include/bits/waitstatus.h" 2 3 4 union wait { int w_status; struct { unsigned int __w_termsig:7; unsigned int __w_coredump:1; unsigned int __w_retcode:8; unsigned int:16; } __wait_terminated; struct { unsigned int __w_stopval:8; unsigned int __w_stopsig:8; unsigned int:16; } __wait_stopped; }; # 44 "/usr/include/stdlib.h" 2 3 4 # 96 "/usr/include/stdlib.h" 3 4 typedef struct { int quot; int rem; } div_t; typedef struct { long int quot; long int rem; } ldiv_t; __extension__ typedef struct { long long int quot; long long int rem; } lldiv_t; # 140 "/usr/include/stdlib.h" 3 4 extern size_t __ctype_get_mb_cur_max (void) throw () ; extern double atof (__const char *__nptr) throw () __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1))) ; extern int atoi (__const char *__nptr) throw () __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1))) ; extern long int atol (__const char *__nptr) throw () __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1))) ; __extension__ extern long long int atoll (__const char *__nptr) throw () __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1))) ; extern double strtod (__const char *__restrict __nptr, char **__restrict __endptr) throw () __attribute__ ((__nonnull__ (1))) ; extern float strtof (__const char *__restrict __nptr, char **__restrict __endptr) throw () __attribute__ ((__nonnull__ (1))) ; extern long double strtold (__const char *__restrict __nptr, char **__restrict __endptr) throw () __attribute__ ((__nonnull__ (1))) ; extern long int strtol (__const char *__restrict __nptr, char **__restrict __endptr, int __base) throw () __attribute__ ((__nonnull__ (1))) ; extern unsigned long int strtoul (__const char *__restrict __nptr, char **__restrict __endptr, int __base) throw () __attribute__ ((__nonnull__ (1))) ; __extension__ extern long long int strtoq (__const char *__restrict __nptr, char **__restrict __endptr, int __base) throw () __attribute__ ((__nonnull__ (1))) ; __extension__ extern unsigned long long int strtouq (__const char *__restrict __nptr, char **__restrict __endptr, int __base) throw () __attribute__ ((__nonnull__ (1))) ; __extension__ extern long long int strtoll (__const char *__restrict __nptr, char **__restrict __endptr, int __base) throw () __attribute__ ((__nonnull__ (1))) ; __extension__ extern unsigned long long int strtoull (__const char *__restrict __nptr, char **__restrict __endptr, int __base) throw () __attribute__ ((__nonnull__ (1))) ; # 236 "/usr/include/stdlib.h" 3 4 # 1 "/usr/include/xlocale.h" 1 3 4 # 28 "/usr/include/xlocale.h" 3 4 typedef struct __locale_struct { struct locale_data *__locales[13]; const unsigned short int *__ctype_b; const int *__ctype_tolower; const int *__ctype_toupper; const char *__names[13]; } *__locale_t; typedef __locale_t locale_t; # 237 "/usr/include/stdlib.h" 2 3 4 extern long int strtol_l (__const char *__restrict __nptr, char **__restrict __endptr, int __base, __locale_t __loc) throw () __attribute__ ((__nonnull__ (1, 4))) ; extern unsigned long int strtoul_l (__const char *__restrict __nptr, char **__restrict __endptr, int __base, __locale_t __loc) throw () __attribute__ ((__nonnull__ (1, 4))) ; __extension__ extern long long int strtoll_l (__const char *__restrict __nptr, char **__restrict __endptr, int __base, __locale_t __loc) throw () __attribute__ ((__nonnull__ (1, 4))) ; __extension__ extern unsigned long long int strtoull_l (__const char *__restrict __nptr, char **__restrict __endptr, int __base, __locale_t __loc) throw () __attribute__ ((__nonnull__ (1, 4))) ; extern double strtod_l (__const char *__restrict __nptr, char **__restrict __endptr, __locale_t __loc) throw () __attribute__ ((__nonnull__ (1, 3))) ; extern float strtof_l (__const char *__restrict __nptr, char **__restrict __endptr, __locale_t __loc) throw () __attribute__ ((__nonnull__ (1, 3))) ; extern long double strtold_l (__const char *__restrict __nptr, char **__restrict __endptr, __locale_t __loc) throw () __attribute__ ((__nonnull__ (1, 3))) ; # 311 "/usr/include/stdlib.h" 3 4 extern char *l64a (long int __n) throw () ; extern long int a64l (__const char *__s) throw () __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1))) ; # 1 "/usr/include/sys/types.h" 1 3 4 # 29 "/usr/include/sys/types.h" 3 4 extern "C" { # 1 "/usr/include/bits/types.h" 1 3 4 # 28 "/usr/include/bits/types.h" 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 29 "/usr/include/bits/types.h" 2 3 4 typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; # 131 "/usr/include/bits/types.h" 3 4 # 1 "/usr/include/bits/typesizes.h" 1 3 4 # 132 "/usr/include/bits/types.h" 2 3 4 typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned long int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef long int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; # 32 "/usr/include/sys/types.h" 2 3 4 typedef __u_char u_char; typedef __u_short u_short; typedef __u_int u_int; typedef __u_long u_long; typedef __quad_t quad_t; typedef __u_quad_t u_quad_t; typedef __fsid_t fsid_t; typedef __loff_t loff_t; typedef __ino_t ino_t; typedef __ino64_t ino64_t; typedef __dev_t dev_t; typedef __gid_t gid_t; typedef __mode_t mode_t; typedef __nlink_t nlink_t; typedef __uid_t uid_t; typedef __off_t off_t; typedef __off64_t off64_t; typedef __pid_t pid_t; typedef __id_t id_t; typedef __ssize_t ssize_t; typedef __daddr_t daddr_t; typedef __caddr_t caddr_t; typedef __key_t key_t; # 133 "/usr/include/sys/types.h" 3 4 # 1 "/usr/include/time.h" 1 3 4 # 58 "/usr/include/time.h" 3 4 typedef __clock_t clock_t; # 74 "/usr/include/time.h" 3 4 typedef __time_t time_t; # 92 "/usr/include/time.h" 3 4 typedef __clockid_t clockid_t; # 104 "/usr/include/time.h" 3 4 typedef __timer_t timer_t; # 134 "/usr/include/sys/types.h" 2 3 4 typedef __useconds_t useconds_t; typedef __suseconds_t suseconds_t; # 1 "/opt/gcc/4.8.1/snos/lib/gcc/x86_64-suse-linux/4.8.1/include/stddef.h" 1 3 4 # 148 "/usr/include/sys/types.h" 2 3 4 typedef unsigned long int ulong; typedef unsigned short int ushort; typedef unsigned int uint; # 195 "/usr/include/sys/types.h" 3 4 typedef int int8_t __attribute__ ((__mode__ (__QI__))); typedef int int16_t __attribute__ ((__mode__ (__HI__))); typedef int int32_t __attribute__ ((__mode__ (__SI__))); typedef int int64_t __attribute__ ((__mode__ (__DI__))); typedef unsigned int u_int8_t __attribute__ ((__mode__ (__QI__))); typedef unsigned int u_int16_t __attribute__ ((__mode__ (__HI__))); typedef unsigned int u_int32_t __attribute__ ((__mode__ (__SI__))); typedef unsigned int u_int64_t __attribute__ ((__mode__ (__DI__))); typedef int register_t __attribute__ ((__mode__ (__word__))); # 220 "/usr/include/sys/types.h" 3 4 # 1 "/usr/include/sys/select.h" 1 3 4 # 31 "/usr/include/sys/select.h" 3 4 # 1 "/usr/include/bits/select.h" 1 3 4 # 23 "/usr/include/bits/select.h" 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 24 "/usr/include/bits/select.h" 2 3 4 # 32 "/usr/include/sys/select.h" 2 3 4 # 1 "/usr/include/bits/sigset.h" 1 3 4 # 24 "/usr/include/bits/sigset.h" 3 4 typedef int __sig_atomic_t; typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; # 35 "/usr/include/sys/select.h" 2 3 4 typedef __sigset_t sigset_t; # 1 "/usr/include/time.h" 1 3 4 # 120 "/usr/include/time.h" 3 4 struct timespec { __time_t tv_sec; long int tv_nsec; }; # 45 "/usr/include/sys/select.h" 2 3 4 # 1 "/usr/include/bits/time.h" 1 3 4 # 69 "/usr/include/bits/time.h" 3 4 struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; # 47 "/usr/include/sys/select.h" 2 3 4 # 55 "/usr/include/sys/select.h" 3 4 typedef long int __fd_mask; # 67 "/usr/include/sys/select.h" 3 4 typedef struct { __fd_mask fds_bits[1024 / (8 * (int) sizeof (__fd_mask))]; } fd_set; typedef __fd_mask fd_mask; # 99 "/usr/include/sys/select.h" 3 4 extern "C" { # 109 "/usr/include/sys/select.h" 3 4 extern int select (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, struct timeval *__restrict __timeout); # 121 "/usr/include/sys/select.h" 3 4 extern int pselect (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, const struct timespec *__restrict __timeout, const __sigset_t *__restrict __sigmask); } # 221 "/usr/include/sys/types.h" 2 3 4 # 1 "/usr/include/sys/sysmacros.h" 1 3 4 # 30 "/usr/include/sys/sysmacros.h" 3 4 __extension__ extern unsigned int gnu_dev_major (unsigned long long int __dev) throw (); __extension__ extern unsigned int gnu_dev_minor (unsigned long long int __dev) throw (); __extension__ extern unsigned long long int gnu_dev_makedev (unsigned int __major, unsigned int __minor) throw (); # 224 "/usr/include/sys/types.h" 2 3 4 typedef __blksize_t blksize_t; typedef __blkcnt_t blkcnt_t; typedef __fsblkcnt_t fsblkcnt_t; typedef __fsfilcnt_t fsfilcnt_t; # 262 "/usr/include/sys/types.h" 3 4 typedef __blkcnt64_t blkcnt64_t; typedef __fsblkcnt64_t fsblkcnt64_t; typedef __fsfilcnt64_t fsfilcnt64_t; # 1 "/usr/include/bits/pthreadtypes.h" 1 3 4 # 23 "/usr/include/bits/pthreadtypes.h" 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 24 "/usr/include/bits/pthreadtypes.h" 2 3 4 # 50 "/usr/include/bits/pthreadtypes.h" 3 4 typedef unsigned long int pthread_t; typedef union { char __size[56]; long int __align; } pthread_attr_t; typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; # 76 "/usr/include/bits/pthreadtypes.h" 3 4 typedef union { struct __pthread_mutex_s { int __lock; unsigned int __count; int __owner; unsigned int __nusers; int __kind; int __spins; __pthread_list_t __list; # 101 "/usr/include/bits/pthreadtypes.h" 3 4 } __data; char __size[40]; long int __align; } pthread_mutex_t; typedef union { char __size[4]; int __align; } pthread_mutexattr_t; typedef union { struct { int __lock; unsigned int __futex; __extension__ unsigned long long int __total_seq; __extension__ unsigned long long int __wakeup_seq; __extension__ unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; __extension__ long long int __align; } pthread_cond_t; typedef union { char __size[4]; int __align; } pthread_condattr_t; typedef unsigned int pthread_key_t; typedef int pthread_once_t; typedef union { struct { int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; unsigned int __flags; } __data; # 187 "/usr/include/bits/pthreadtypes.h" 3 4 char __size[56]; long int __align; } pthread_rwlock_t; typedef union { char __size[8]; long int __align; } pthread_rwlockattr_t; typedef volatile int pthread_spinlock_t; typedef union { char __size[32]; long int __align; } pthread_barrier_t; typedef union { char __size[4]; int __align; } pthread_barrierattr_t; # 271 "/usr/include/sys/types.h" 2 3 4 } # 321 "/usr/include/stdlib.h" 2 3 4 extern long int random (void) throw (); extern void srandom (unsigned int __seed) throw (); extern char *initstate (unsigned int __seed, char *__statebuf, size_t __statelen) throw () __attribute__ ((__nonnull__ (2))); extern char *setstate (char *__statebuf) throw () __attribute__ ((__nonnull__ (1))); struct random_data { int32_t *fptr; int32_t *rptr; int32_t *state; int rand_type; int rand_deg; int rand_sep; int32_t *end_ptr; }; extern int random_r (struct random_data *__restrict __buf, int32_t *__restrict __result) throw () __attribute__ ((__nonnull__ (1, 2))); extern int srandom_r (unsigned int __seed, struct random_data *__buf) throw () __attribute__ ((__nonnull__ (2))); extern int initstate_r (unsigned int __seed, char *__restrict __statebuf, size_t __statelen, struct random_data *__restrict __buf) throw () __attribute__ ((__nonnull__ (2, 4))); extern int setstate_r (char *__restrict __statebuf, struct random_data *__restrict __buf) throw () __attribute__ ((__nonnull__ (1, 2))); extern int rand (void) throw (); extern void srand (unsigned int __seed) throw (); extern int rand_r (unsigned int *__seed) throw (); extern double drand48 (void) throw (); extern double erand48 (unsigned short int __xsubi[3]) throw () __attribute__ ((__nonnull__ (1))); extern long int lrand48 (void) throw (); extern long int nrand48 (unsigned short int __xsubi[3]) throw () __attribute__ ((__nonnull__ (1))); extern long int mrand48 (void) throw (); extern long int jrand48 (unsigned short int __xsubi[3]) throw () __attribute__ ((__nonnull__ (1))); extern void srand48 (long int __seedval) throw (); extern unsigned short int *seed48 (unsigned short int __seed16v[3]) throw () __attribute__ ((__nonnull__ (1))); extern void lcong48 (unsigned short int __param[7]) throw () __attribute__ ((__nonnull__ (1))); struct drand48_data { unsigned short int __x[3]; unsigned short int __old_x[3]; unsigned short int __c; unsigned short int __init; unsigned long long int __a; }; extern int drand48_r (struct drand48_data *__restrict __buffer, double *__restrict __result) throw () __attribute__ ((__nonnull__ (1, 2))); extern int erand48_r (unsigned short int __xsubi[3], struct drand48_data *__restrict __buffer, double *__restrict __result) throw () __attribute__ ((__nonnull__ (1, 2))); extern int lrand48_r (struct drand48_data *__restrict __buffer, long int *__restrict __result) throw () __attribute__ ((__nonnull__ (1, 2))); extern int nrand48_r (unsigned short int __xsubi[3], struct drand48_data *__restrict __buffer, long int *__restrict __result) throw () __attribute__ ((__nonnull__ (1, 2))); extern int mrand48_r (struct drand48_data *__restrict __buffer, long int *__restrict __result) throw () __attribute__ ((__nonnull__ (1, 2))); extern int jrand48_r (unsigned short int __xsubi[3], struct drand48_data *__restrict __buffer, long int *__restrict __result) throw () __attribute__ ((__nonnull__ (1, 2))); extern int srand48_r (long int __seedval, struct drand48_data *__buffer) throw () __attribute__ ((__nonnull__ (2))); extern int seed48_r (unsigned short int __seed16v[3], struct drand48_data *__buffer) throw () __attribute__ ((__nonnull__ (1, 2))); extern int lcong48_r (unsigned short int __param[7], struct drand48_data *__buffer) throw () __attribute__ ((__nonnull__ (1, 2))); extern void *malloc (size_t __size) throw () __attribute__ ((__malloc__)) ; extern void *calloc (size_t __nmemb, size_t __size) throw () __attribute__ ((__malloc__)) ; extern void *realloc (void *__ptr, size_t __size) throw () __attribute__ ((__warn_unused_result__)); extern void free (void *__ptr) throw (); extern void cfree (void *__ptr) throw (); # 1 "/usr/include/alloca.h" 1 3 4 # 25 "/usr/include/alloca.h" 3 4 # 1 "/opt/gcc/4.8.1/snos/lib/gcc/x86_64-suse-linux/4.8.1/include/stddef.h" 1 3 4 # 26 "/usr/include/alloca.h" 2 3 4 extern "C" { extern void *alloca (size_t __size) throw (); } # 498 "/usr/include/stdlib.h" 2 3 4 extern void *valloc (size_t __size) throw () __attribute__ ((__malloc__)) ; extern int posix_memalign (void **__memptr, size_t __alignment, size_t __size) throw () __attribute__ ((__nonnull__ (1))) ; extern void abort (void) throw () __attribute__ ((__noreturn__)); extern int atexit (void (*__func) (void)) throw () __attribute__ ((__nonnull__ (1))); extern "C++" int at_quick_exit (void (*__func) (void)) throw () __asm ("at_quick_exit") __attribute__ ((__nonnull__ (1))); extern int on_exit (void (*__func) (int __status, void *__arg), void *__arg) throw () __attribute__ ((__nonnull__ (1))); extern void exit (int __status) throw () __attribute__ ((__noreturn__)); extern void quick_exit (int __status) throw () __attribute__ ((__noreturn__)); extern void _Exit (int __status) throw () __attribute__ ((__noreturn__)); extern char *getenv (__const char *__name) throw () __attribute__ ((__nonnull__ (1))) ; extern char *__secure_getenv (__const char *__name) throw () __attribute__ ((__nonnull__ (1))) ; extern int putenv (char *__string) throw () __attribute__ ((__nonnull__ (1))); extern int setenv (__const char *__name, __const char *__value, int __replace) throw () __attribute__ ((__nonnull__ (2))); extern int unsetenv (__const char *__name) throw (); extern int clearenv (void) throw (); # 604 "/usr/include/stdlib.h" 3 4 extern char *mktemp (char *__template) throw () __attribute__ ((__nonnull__ (1))) ; # 615 "/usr/include/stdlib.h" 3 4 extern int mkstemp (char *__template) __attribute__ ((__nonnull__ (1))) ; # 625 "/usr/include/stdlib.h" 3 4 extern int mkstemp64 (char *__template) __attribute__ ((__nonnull__ (1))) ; # 637 "/usr/include/stdlib.h" 3 4 extern int mkstemps (char *__template, int __suffixlen) __attribute__ ((__nonnull__ (1))) ; # 647 "/usr/include/stdlib.h" 3 4 extern int mkstemps64 (char *__template, int __suffixlen) __attribute__ ((__nonnull__ (1))) ; # 658 "/usr/include/stdlib.h" 3 4 extern char *mkdtemp (char *__template) throw () __attribute__ ((__nonnull__ (1))) ; # 669 "/usr/include/stdlib.h" 3 4 extern int mkostemp (char *__template, int __flags) __attribute__ ((__nonnull__ (1))) ; # 679 "/usr/include/stdlib.h" 3 4 extern int mkostemp64 (char *__template, int __flags) __attribute__ ((__nonnull__ (1))) ; # 689 "/usr/include/stdlib.h" 3 4 extern int mkostemps (char *__template, int __suffixlen, int __flags) __attribute__ ((__nonnull__ (1))) ; # 701 "/usr/include/stdlib.h" 3 4 extern int mkostemps64 (char *__template, int __suffixlen, int __flags) __attribute__ ((__nonnull__ (1))) ; extern int system (__const char *__command) ; extern char *canonicalize_file_name (__const char *__name) throw () __attribute__ ((__nonnull__ (1))) ; # 729 "/usr/include/stdlib.h" 3 4 extern char *realpath (__const char *__restrict __name, char *__restrict __resolved) throw () ; typedef int (*__compar_fn_t) (__const void *, __const void *); typedef __compar_fn_t comparison_fn_t; typedef int (*__compar_d_fn_t) (__const void *, __const void *, void *); extern void *bsearch (__const void *__key, __const void *__base, size_t __nmemb, size_t __size, __compar_fn_t __compar) __attribute__ ((__nonnull__ (1, 2, 5))) ; extern void qsort (void *__base, size_t __nmemb, size_t __size, __compar_fn_t __compar) __attribute__ ((__nonnull__ (1, 4))); extern void qsort_r (void *__base, size_t __nmemb, size_t __size, __compar_d_fn_t __compar, void *__arg) __attribute__ ((__nonnull__ (1, 4))); extern int abs (int __x) throw () __attribute__ ((__const__)) ; extern long int labs (long int __x) throw () __attribute__ ((__const__)) ; __extension__ extern long long int llabs (long long int __x) throw () __attribute__ ((__const__)) ; extern div_t div (int __numer, int __denom) throw () __attribute__ ((__const__)) ; extern ldiv_t ldiv (long int __numer, long int __denom) throw () __attribute__ ((__const__)) ; __extension__ extern lldiv_t lldiv (long long int __numer, long long int __denom) throw () __attribute__ ((__const__)) ; # 802 "/usr/include/stdlib.h" 3 4 extern char *ecvt (double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign) throw () __attribute__ ((__nonnull__ (3, 4))) ; extern char *fcvt (double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign) throw () __attribute__ ((__nonnull__ (3, 4))) ; extern char *gcvt (double __value, int __ndigit, char *__buf) throw () __attribute__ ((__nonnull__ (3))) ; extern char *qecvt (long double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign) throw () __attribute__ ((__nonnull__ (3, 4))) ; extern char *qfcvt (long double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign) throw () __attribute__ ((__nonnull__ (3, 4))) ; extern char *qgcvt (long double __value, int __ndigit, char *__buf) throw () __attribute__ ((__nonnull__ (3))) ; extern int ecvt_r (double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign, char *__restrict __buf, size_t __len) throw () __attribute__ ((__nonnull__ (3, 4, 5))); extern int fcvt_r (double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign, char *__restrict __buf, size_t __len) throw () __attribute__ ((__nonnull__ (3, 4, 5))); extern int qecvt_r (long double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign, char *__restrict __buf, size_t __len) throw () __attribute__ ((__nonnull__ (3, 4, 5))); extern int qfcvt_r (long double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign, char *__restrict __buf, size_t __len) throw () __attribute__ ((__nonnull__ (3, 4, 5))); extern int mblen (__const char *__s, size_t __n) throw () ; extern int mbtowc (wchar_t *__restrict __pwc, __const char *__restrict __s, size_t __n) throw () ; extern int wctomb (char *__s, wchar_t __wchar) throw () ; extern size_t mbstowcs (wchar_t *__restrict __pwcs, __const char *__restrict __s, size_t __n) throw (); extern size_t wcstombs (char *__restrict __s, __const wchar_t *__restrict __pwcs, size_t __n) throw (); extern int rpmatch (__const char *__response) throw () __attribute__ ((__nonnull__ (1))) ; # 890 "/usr/include/stdlib.h" 3 4 extern int getsubopt (char **__restrict __optionp, char *__const *__restrict __tokens, char **__restrict __valuep) throw () __attribute__ ((__nonnull__ (1, 2, 3))) ; extern void setkey (__const char *__key) throw () __attribute__ ((__nonnull__ (1))); extern int posix_openpt (int __oflag) ; extern int grantpt (int __fd) throw (); extern int unlockpt (int __fd) throw (); extern char *ptsname (int __fd) throw () ; extern int ptsname_r (int __fd, char *__buf, size_t __buflen) throw () __attribute__ ((__nonnull__ (2))); extern int getpt (void); extern int getloadavg (double __loadavg[], int __nelem) throw () __attribute__ ((__nonnull__ (1))); # 958 "/usr/include/stdlib.h" 3 4 } # 73 "/opt/gcc/4.8.1/snos/include/g++/cstdlib" 2 3 # 114 "/opt/gcc/4.8.1/snos/include/g++/cstdlib" 3 namespace std __attribute__ ((__visibility__ ("default"))) { using ::div_t; using ::ldiv_t; using ::abort; using ::abs; using ::atexit; using ::atof; using ::atoi; using ::atol; using ::bsearch; using ::calloc; using ::div; using ::exit; using ::free; using ::getenv; using ::labs; using ::ldiv; using ::malloc; using ::mblen; using ::mbstowcs; using ::mbtowc; using ::qsort; using ::rand; using ::realloc; using ::srand; using ::strtod; using ::strtol; using ::strtoul; using ::system; using ::wcstombs; using ::wctomb; inline long abs(long __i) { return __builtin_labs(__i); } inline ldiv_t div(long __i, long __j) { return ldiv(__i, __j); } inline long long abs(long long __x) { return __builtin_llabs (__x); } inline __int128 abs(__int128 __x) { return __x >= 0 ? __x : -__x; } } # 196 "/opt/gcc/4.8.1/snos/include/g++/cstdlib" 3 namespace __gnu_cxx __attribute__ ((__visibility__ ("default"))) { using ::lldiv_t; using ::_Exit; using ::llabs; inline lldiv_t div(long long __n, long long __d) { lldiv_t __q; __q.quot = __n / __d; __q.rem = __n % __d; return __q; } using ::lldiv; # 228 "/opt/gcc/4.8.1/snos/include/g++/cstdlib" 3 using ::atoll; using ::strtoll; using ::strtoull; using ::strtof; using ::strtold; } namespace std { using ::__gnu_cxx::lldiv_t; using ::__gnu_cxx::_Exit; using ::__gnu_cxx::llabs; using ::__gnu_cxx::div; using ::__gnu_cxx::lldiv; using ::__gnu_cxx::atoll; using ::__gnu_cxx::strtof; using ::__gnu_cxx::strtoll; using ::__gnu_cxx::strtoull; using ::__gnu_cxx::strtold; } # 3 "/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.cc" 2 Popping language Cxx ================================================================================ TEST checkFortranCompiler from config.setCompilers(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/setCompilers.py:882) TESTING: checkFortranCompiler from config.setCompilers(config/BuildSystem/config/setCompilers.py:882) Locate a functional Fortran compiler Checking for program /usr/common/usg/darshan/2.2.6/bin/ftn...not found Checking for program /scratch/altd/1.0/bin/ftn...not found Checking for program /usr/common/usg/bin/ftn...not found Checking for program /usr/common/mss/bin/ftn...not found Checking for program /usr/common/nsg/bin/ftn...not found Checking for program /global/common/carver/usg/matlab/R2012a/bin/ftn...not found Checking for program /opt/cray/netcdf/4.3.0/bin/ftn...not found Checking for program /opt/cray/hdf5/1.8.11/bin/ftn...not found Checking for program /usr/common/usg/allineatools/4.2-34404/bin/ftn...not found Checking for program /usr/common/usg/ipm/2.00/bin/ftn...not found Checking for program /opt/cray/papi/5.1.2/perf_events/no-cuda/bin/ftn...not found Checking for program /usr/common/graphics/visit/bin/ftn...not found Checking for program /usr/common/usg/cmake/2.8.10.1/bin/ftn...not found Checking for program /opt/cray/atp/1.7.0/bin/ftn...not found Checking for program /opt/cray/switch/1.0-1.0402.45840.2.63.gem/bin/ftn...not found Checking for program /opt/cray/shared-root/1.0-1.0402.46893.3.17.gem/bin/ftn...not found Checking for program /opt/cray/pdsh/2.26-1.0402.45278.1.1.gem/bin/ftn...not found Checking for program /opt/cray/nodehealth/5.1-1.0402.45895.3.76.gem/bin/ftn...not found Checking for program /opt/cray/lbcd/2.1-1.0402.45245.1.2.gem/bin/ftn...not found Checking for program /opt/cray/hosts/1.0-1.0402.45251.1.86.gem/bin/ftn...not found Checking for program /opt/cray/configuration/1.0-1.0402.45284.1.2.gem/bin/ftn...not found Checking for program /opt/cray/ccm/default/sbin/ftn...not found Checking for program /opt/cray/ccm/default/bin/ftn...not found Checking for program /opt/cray/audit/1.0.0-1.0402.45273.1.86.gem/bin/ftn...not found Checking for program /opt/cray/rca/1.0.0-2.0402.47290.7.1.gem/bin/ftn...not found Checking for program /opt/cray/csa/3.0.0-1_2.0402.45268.1.90.gem/sbin/ftn...not found Checking for program /opt/cray/csa/3.0.0-1_2.0402.45268.1.90.gem/bin/ftn...not found Checking for program /opt/cray/job/1.5.5-0.1_2.0402.45272.1.5.gem/bin/ftn...not found Checking for program /opt/cray/xpmem/0.1-2.0402.45248.1.5.gem/bin/ftn...not found Checking for program /opt/cray/dmapp/4.0.1-1.0402.7784.4.1.gem/bin/ftn...not found Checking for program /opt/cray/pmi/4.0.1-1.0000.9753.86.3.gem/bin/ftn...not found Checking for program /opt/cray/ugni/5.0-1.0402.7551.1.10.gem/bin/ftn...not found Checking for program /opt/cray/udreg/2.3.2-1.0402.7546.1.5.gem/bin/ftn...not found Checking for program /opt/gcc/4.8.1/bin/ftn...not found Checking for program /opt/cray/xt-asyncpe/5.23/bin/ftn...found Defined make macro "FC" to "ftn" Pushing language FC sh: ftn -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.F Executing: ftn -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.F sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: program main end sh: ftn -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.F Executing: ftn -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.F sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: program main end Pushing language C Popping language C Pushing language CUDA Popping language CUDA Pushing language Cxx Popping language Cxx Pushing language FC Popping language FC Pushing language FC Popping language FC sh: ftn -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o Executing: ftn -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded output: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Pushing language FC Popping language FC in ftn -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o Source: program main end sh: ftn -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.F Executing: ftn -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.F sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: program main end Pushing language FC Popping language FC sh: ftn -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o Executing: ftn -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded output: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Pushing language FC Popping language FC in ftn -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o Source: program main end Executing: /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest sh: /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest Executing: /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest sh: Popping language FC ================================================================================ TEST checkFortranComments from config.setCompilers(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/setCompilers.py:901) TESTING: checkFortranComments from config.setCompilers(config/BuildSystem/config/setCompilers.py:901) Make sure fortran comment "!" works Pushing language FC sh: ftn -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.F Executing: ftn -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.F sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: ! comment program main end Fortran comments can use ! in column 1 Popping language FC ================================================================================ TEST checkPIC from config.setCompilers(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/setCompilers.py:964) TESTING: checkPIC from config.setCompilers(config/BuildSystem/config/setCompilers.py:964) Determine the PIC option for each compiler - There needs to be a test that checks that the functionality is actually working Skip checking PIC options on user request ================================================================================ TEST checkLargeFileIO from config.setCompilers(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/setCompilers.py:998) TESTING: checkLargeFileIO from config.setCompilers(config/BuildSystem/config/setCompilers.py:998) ================================================================================ TEST checkArchiver from config.setCompilers(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/setCompilers.py:1097) TESTING: checkArchiver from config.setCompilers(config/BuildSystem/config/setCompilers.py:1097) Check that the archiver exists and can make a library usable by the compiler Pushing language C sh: ar -V Executing: ar -V sh: GNU ar (GNU Binutils; SUSE Linux Enterprise 11) 2.21.1 Copyright 2011 Free Software Foundation, Inc. This program is free software; you may redistribute it under the terms of the GNU General Public License version 3 or (at your option) any later version. This program has absolutely no warranty. sh: ar -V Executing: ar -V sh: GNU ar (GNU Binutils; SUSE Linux Enterprise 11) 2.21.1 Copyright 2011 Free Software Foundation, Inc. This program is free software; you may redistribute it under the terms of the GNU General Public License version 3 or (at your option) any later version. This program has absolutely no warranty. Defined make macro "FAST_AR_FLAGS" to "Scq" sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" int foo(int a) { return a+1; } Checking for program /usr/common/usg/darshan/2.2.6/bin/ar...not found Checking for program /scratch/altd/1.0/bin/ar...not found Checking for program /usr/common/usg/bin/ar...not found Checking for program /usr/common/mss/bin/ar...not found Checking for program /usr/common/nsg/bin/ar...not found Checking for program /global/common/carver/usg/matlab/R2012a/bin/ar...not found Checking for program /opt/cray/netcdf/4.3.0/bin/ar...not found Checking for program /opt/cray/hdf5/1.8.11/bin/ar...not found Checking for program /usr/common/usg/allineatools/4.2-34404/bin/ar...not found Checking for program /usr/common/usg/ipm/2.00/bin/ar...not found Checking for program /opt/cray/papi/5.1.2/perf_events/no-cuda/bin/ar...not found Checking for program /usr/common/graphics/visit/bin/ar...not found Checking for program /usr/common/usg/cmake/2.8.10.1/bin/ar...not found Checking for program /opt/cray/atp/1.7.0/bin/ar...not found Checking for program /opt/cray/switch/1.0-1.0402.45840.2.63.gem/bin/ar...not found Checking for program /opt/cray/shared-root/1.0-1.0402.46893.3.17.gem/bin/ar...not found Checking for program /opt/cray/pdsh/2.26-1.0402.45278.1.1.gem/bin/ar...not found Checking for program /opt/cray/nodehealth/5.1-1.0402.45895.3.76.gem/bin/ar...not found Checking for program /opt/cray/lbcd/2.1-1.0402.45245.1.2.gem/bin/ar...not found Checking for program /opt/cray/hosts/1.0-1.0402.45251.1.86.gem/bin/ar...not found Checking for program /opt/cray/configuration/1.0-1.0402.45284.1.2.gem/bin/ar...not found Checking for program /opt/cray/ccm/default/sbin/ar...not found Checking for program /opt/cray/ccm/default/bin/ar...not found Checking for program /opt/cray/audit/1.0.0-1.0402.45273.1.86.gem/bin/ar...not found Checking for program /opt/cray/rca/1.0.0-2.0402.47290.7.1.gem/bin/ar...not found Checking for program /opt/cray/csa/3.0.0-1_2.0402.45268.1.90.gem/sbin/ar...not found Checking for program /opt/cray/csa/3.0.0-1_2.0402.45268.1.90.gem/bin/ar...not found Checking for program /opt/cray/job/1.5.5-0.1_2.0402.45272.1.5.gem/bin/ar...not found Checking for program /opt/cray/xpmem/0.1-2.0402.45248.1.5.gem/bin/ar...not found Checking for program /opt/cray/dmapp/4.0.1-1.0402.7784.4.1.gem/bin/ar...not found Checking for program /opt/cray/pmi/4.0.1-1.0000.9753.86.3.gem/bin/ar...not found Checking for program /opt/cray/ugni/5.0-1.0402.7551.1.10.gem/bin/ar...not found Checking for program /opt/cray/udreg/2.3.2-1.0402.7546.1.5.gem/bin/ar...not found Checking for program /opt/gcc/4.8.1/bin/ar...not found Checking for program /opt/cray/xt-asyncpe/5.23/bin/ar...not found Checking for program /usr/common/usg/valgrind/3.8.1/bin/ar...not found Checking for program /global/homes/m/madams/git-fat/ar...not found Checking for program /opt/moab/7.2.3_notcpretry/bin/ar...not found Checking for program /opt/moab/7.2.3_notcpretry/sbin/ar...not found Checking for program /opt/torque/4.2.3.h5_notcpretry/sbin/ar...not found Checking for program /opt/torque/4.2.3.h5_notcpretry/bin/ar...not found Checking for program /opt/cray/eslogin/eswrap/1.0.20-1.010102.662.0/bin/ar...not found Checking for program /opt/modules/3.2.6.7/bin/ar...not found Checking for program /usr/syscom/nsg/sbin/ar...not found Checking for program /usr/syscom/nsg/bin/ar...not found Checking for program /opt/modules/3.2.6.6/bin/ar...not found Checking for program /usr/lpp/mmfs/bin/ar...not found Checking for program /usr/local/bin/ar...not found Checking for program /usr/bin/ar...found Defined make macro "AR" to "/usr/bin/ar" Checking for program /usr/common/usg/darshan/2.2.6/bin/ranlib...not found Checking for program /scratch/altd/1.0/bin/ranlib...not found Checking for program /usr/common/usg/bin/ranlib...not found Checking for program /usr/common/mss/bin/ranlib...not found Checking for program /usr/common/nsg/bin/ranlib...not found Checking for program /global/common/carver/usg/matlab/R2012a/bin/ranlib...not found Checking for program /opt/cray/netcdf/4.3.0/bin/ranlib...not found Checking for program /opt/cray/hdf5/1.8.11/bin/ranlib...not found Checking for program /usr/common/usg/allineatools/4.2-34404/bin/ranlib...not found Checking for program /usr/common/usg/ipm/2.00/bin/ranlib...not found Checking for program /opt/cray/papi/5.1.2/perf_events/no-cuda/bin/ranlib...not found Checking for program /usr/common/graphics/visit/bin/ranlib...not found Checking for program /usr/common/usg/cmake/2.8.10.1/bin/ranlib...not found Checking for program /opt/cray/atp/1.7.0/bin/ranlib...not found Checking for program /opt/cray/switch/1.0-1.0402.45840.2.63.gem/bin/ranlib...not found Checking for program /opt/cray/shared-root/1.0-1.0402.46893.3.17.gem/bin/ranlib...not found Checking for program /opt/cray/pdsh/2.26-1.0402.45278.1.1.gem/bin/ranlib...not found Checking for program /opt/cray/nodehealth/5.1-1.0402.45895.3.76.gem/bin/ranlib...not found Checking for program /opt/cray/lbcd/2.1-1.0402.45245.1.2.gem/bin/ranlib...not found Checking for program /opt/cray/hosts/1.0-1.0402.45251.1.86.gem/bin/ranlib...not found Checking for program /opt/cray/configuration/1.0-1.0402.45284.1.2.gem/bin/ranlib...not found Checking for program /opt/cray/ccm/default/sbin/ranlib...not found Checking for program /opt/cray/ccm/default/bin/ranlib...not found Checking for program /opt/cray/audit/1.0.0-1.0402.45273.1.86.gem/bin/ranlib...not found Checking for program /opt/cray/rca/1.0.0-2.0402.47290.7.1.gem/bin/ranlib...not found Checking for program /opt/cray/csa/3.0.0-1_2.0402.45268.1.90.gem/sbin/ranlib...not found Checking for program /opt/cray/csa/3.0.0-1_2.0402.45268.1.90.gem/bin/ranlib...not found Checking for program /opt/cray/job/1.5.5-0.1_2.0402.45272.1.5.gem/bin/ranlib...not found Checking for program /opt/cray/xpmem/0.1-2.0402.45248.1.5.gem/bin/ranlib...not found Checking for program /opt/cray/dmapp/4.0.1-1.0402.7784.4.1.gem/bin/ranlib...not found Checking for program /opt/cray/pmi/4.0.1-1.0000.9753.86.3.gem/bin/ranlib...not found Checking for program /opt/cray/ugni/5.0-1.0402.7551.1.10.gem/bin/ranlib...not found Checking for program /opt/cray/udreg/2.3.2-1.0402.7546.1.5.gem/bin/ranlib...not found Checking for program /opt/gcc/4.8.1/bin/ranlib...not found Checking for program /opt/cray/xt-asyncpe/5.23/bin/ranlib...not found Checking for program /usr/common/usg/valgrind/3.8.1/bin/ranlib...not found Checking for program /global/homes/m/madams/git-fat/ranlib...not found Checking for program /opt/moab/7.2.3_notcpretry/bin/ranlib...not found Checking for program /opt/moab/7.2.3_notcpretry/sbin/ranlib...not found Checking for program /opt/torque/4.2.3.h5_notcpretry/sbin/ranlib...not found Checking for program /opt/torque/4.2.3.h5_notcpretry/bin/ranlib...not found Checking for program /opt/cray/eslogin/eswrap/1.0.20-1.010102.662.0/bin/ranlib...not found Checking for program /opt/modules/3.2.6.7/bin/ranlib...not found Checking for program /usr/syscom/nsg/sbin/ranlib...not found Checking for program /usr/syscom/nsg/bin/ranlib...not found Checking for program /opt/modules/3.2.6.6/bin/ranlib...not found Checking for program /usr/lpp/mmfs/bin/ranlib...not found Checking for program /usr/local/bin/ranlib...not found Checking for program /usr/bin/ranlib...found Defined make macro "RANLIB" to "/usr/bin/ranlib -c" sh: /usr/bin/ar cr /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/libconf1.a /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conf1.o Executing: /usr/bin/ar cr /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/libconf1.a /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conf1.o sh: sh: /usr/bin/ranlib -c /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/libconf1.a Executing: /usr/bin/ranlib -c /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/libconf1.a sh: Possible ERROR while running ranlib: ret = 256 error message = {/usr/bin/ranlib: '-c': No such file } Ranlib is not functional with your archiver. Try --with-ranlib=true if ranlib is unnecessary. sh: ar -V Executing: ar -V sh: GNU ar (GNU Binutils; SUSE Linux Enterprise 11) 2.21.1 Copyright 2011 Free Software Foundation, Inc. This program is free software; you may redistribute it under the terms of the GNU General Public License version 3 or (at your option) any later version. This program has absolutely no warranty. sh: ar -V Executing: ar -V sh: GNU ar (GNU Binutils; SUSE Linux Enterprise 11) 2.21.1 Copyright 2011 Free Software Foundation, Inc. This program is free software; you may redistribute it under the terms of the GNU General Public License version 3 or (at your option) any later version. This program has absolutely no warranty. Defined make macro "FAST_AR_FLAGS" to "Scq" sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" int foo(int a) { return a+1; } Checking for program /usr/common/usg/darshan/2.2.6/bin/ar...not found Checking for program /scratch/altd/1.0/bin/ar...not found Checking for program /usr/common/usg/bin/ar...not found Checking for program /usr/common/mss/bin/ar...not found Checking for program /usr/common/nsg/bin/ar...not found Checking for program /global/common/carver/usg/matlab/R2012a/bin/ar...not found Checking for program /opt/cray/netcdf/4.3.0/bin/ar...not found Checking for program /opt/cray/hdf5/1.8.11/bin/ar...not found Checking for program /usr/common/usg/allineatools/4.2-34404/bin/ar...not found Checking for program /usr/common/usg/ipm/2.00/bin/ar...not found Checking for program /opt/cray/papi/5.1.2/perf_events/no-cuda/bin/ar...not found Checking for program /usr/common/graphics/visit/bin/ar...not found Checking for program /usr/common/usg/cmake/2.8.10.1/bin/ar...not found Checking for program /opt/cray/atp/1.7.0/bin/ar...not found Checking for program /opt/cray/switch/1.0-1.0402.45840.2.63.gem/bin/ar...not found Checking for program /opt/cray/shared-root/1.0-1.0402.46893.3.17.gem/bin/ar...not found Checking for program /opt/cray/pdsh/2.26-1.0402.45278.1.1.gem/bin/ar...not found Checking for program /opt/cray/nodehealth/5.1-1.0402.45895.3.76.gem/bin/ar...not found Checking for program /opt/cray/lbcd/2.1-1.0402.45245.1.2.gem/bin/ar...not found Checking for program /opt/cray/hosts/1.0-1.0402.45251.1.86.gem/bin/ar...not found Checking for program /opt/cray/configuration/1.0-1.0402.45284.1.2.gem/bin/ar...not found Checking for program /opt/cray/ccm/default/sbin/ar...not found Checking for program /opt/cray/ccm/default/bin/ar...not found Checking for program /opt/cray/audit/1.0.0-1.0402.45273.1.86.gem/bin/ar...not found Checking for program /opt/cray/rca/1.0.0-2.0402.47290.7.1.gem/bin/ar...not found Checking for program /opt/cray/csa/3.0.0-1_2.0402.45268.1.90.gem/sbin/ar...not found Checking for program /opt/cray/csa/3.0.0-1_2.0402.45268.1.90.gem/bin/ar...not found Checking for program /opt/cray/job/1.5.5-0.1_2.0402.45272.1.5.gem/bin/ar...not found Checking for program /opt/cray/xpmem/0.1-2.0402.45248.1.5.gem/bin/ar...not found Checking for program /opt/cray/dmapp/4.0.1-1.0402.7784.4.1.gem/bin/ar...not found Checking for program /opt/cray/pmi/4.0.1-1.0000.9753.86.3.gem/bin/ar...not found Checking for program /opt/cray/ugni/5.0-1.0402.7551.1.10.gem/bin/ar...not found Checking for program /opt/cray/udreg/2.3.2-1.0402.7546.1.5.gem/bin/ar...not found Checking for program /opt/gcc/4.8.1/bin/ar...not found Checking for program /opt/cray/xt-asyncpe/5.23/bin/ar...not found Checking for program /usr/common/usg/valgrind/3.8.1/bin/ar...not found Checking for program /global/homes/m/madams/git-fat/ar...not found Checking for program /opt/moab/7.2.3_notcpretry/bin/ar...not found Checking for program /opt/moab/7.2.3_notcpretry/sbin/ar...not found Checking for program /opt/torque/4.2.3.h5_notcpretry/sbin/ar...not found Checking for program /opt/torque/4.2.3.h5_notcpretry/bin/ar...not found Checking for program /opt/cray/eslogin/eswrap/1.0.20-1.010102.662.0/bin/ar...not found Checking for program /opt/modules/3.2.6.7/bin/ar...not found Checking for program /usr/syscom/nsg/sbin/ar...not found Checking for program /usr/syscom/nsg/bin/ar...not found Checking for program /opt/modules/3.2.6.6/bin/ar...not found Checking for program /usr/lpp/mmfs/bin/ar...not found Checking for program /usr/local/bin/ar...not found Checking for program /usr/bin/ar...found Defined make macro "AR" to "/usr/bin/ar" Checking for program /usr/common/usg/darshan/2.2.6/bin/ranlib...not found Checking for program /scratch/altd/1.0/bin/ranlib...not found Checking for program /usr/common/usg/bin/ranlib...not found Checking for program /usr/common/mss/bin/ranlib...not found Checking for program /usr/common/nsg/bin/ranlib...not found Checking for program /global/common/carver/usg/matlab/R2012a/bin/ranlib...not found Checking for program /opt/cray/netcdf/4.3.0/bin/ranlib...not found Checking for program /opt/cray/hdf5/1.8.11/bin/ranlib...not found Checking for program /usr/common/usg/allineatools/4.2-34404/bin/ranlib...not found Checking for program /usr/common/usg/ipm/2.00/bin/ranlib...not found Checking for program /opt/cray/papi/5.1.2/perf_events/no-cuda/bin/ranlib...not found Checking for program /usr/common/graphics/visit/bin/ranlib...not found Checking for program /usr/common/usg/cmake/2.8.10.1/bin/ranlib...not found Checking for program /opt/cray/atp/1.7.0/bin/ranlib...not found Checking for program /opt/cray/switch/1.0-1.0402.45840.2.63.gem/bin/ranlib...not found Checking for program /opt/cray/shared-root/1.0-1.0402.46893.3.17.gem/bin/ranlib...not found Checking for program /opt/cray/pdsh/2.26-1.0402.45278.1.1.gem/bin/ranlib...not found Checking for program /opt/cray/nodehealth/5.1-1.0402.45895.3.76.gem/bin/ranlib...not found Checking for program /opt/cray/lbcd/2.1-1.0402.45245.1.2.gem/bin/ranlib...not found Checking for program /opt/cray/hosts/1.0-1.0402.45251.1.86.gem/bin/ranlib...not found Checking for program /opt/cray/configuration/1.0-1.0402.45284.1.2.gem/bin/ranlib...not found Checking for program /opt/cray/ccm/default/sbin/ranlib...not found Checking for program /opt/cray/ccm/default/bin/ranlib...not found Checking for program /opt/cray/audit/1.0.0-1.0402.45273.1.86.gem/bin/ranlib...not found Checking for program /opt/cray/rca/1.0.0-2.0402.47290.7.1.gem/bin/ranlib...not found Checking for program /opt/cray/csa/3.0.0-1_2.0402.45268.1.90.gem/sbin/ranlib...not found Checking for program /opt/cray/csa/3.0.0-1_2.0402.45268.1.90.gem/bin/ranlib...not found Checking for program /opt/cray/job/1.5.5-0.1_2.0402.45272.1.5.gem/bin/ranlib...not found Checking for program /opt/cray/xpmem/0.1-2.0402.45248.1.5.gem/bin/ranlib...not found Checking for program /opt/cray/dmapp/4.0.1-1.0402.7784.4.1.gem/bin/ranlib...not found Checking for program /opt/cray/pmi/4.0.1-1.0000.9753.86.3.gem/bin/ranlib...not found Checking for program /opt/cray/ugni/5.0-1.0402.7551.1.10.gem/bin/ranlib...not found Checking for program /opt/cray/udreg/2.3.2-1.0402.7546.1.5.gem/bin/ranlib...not found Checking for program /opt/gcc/4.8.1/bin/ranlib...not found Checking for program /opt/cray/xt-asyncpe/5.23/bin/ranlib...not found Checking for program /usr/common/usg/valgrind/3.8.1/bin/ranlib...not found Checking for program /global/homes/m/madams/git-fat/ranlib...not found Checking for program /opt/moab/7.2.3_notcpretry/bin/ranlib...not found Checking for program /opt/moab/7.2.3_notcpretry/sbin/ranlib...not found Checking for program /opt/torque/4.2.3.h5_notcpretry/sbin/ranlib...not found Checking for program /opt/torque/4.2.3.h5_notcpretry/bin/ranlib...not found Checking for program /opt/cray/eslogin/eswrap/1.0.20-1.010102.662.0/bin/ranlib...not found Checking for program /opt/modules/3.2.6.7/bin/ranlib...not found Checking for program /usr/syscom/nsg/sbin/ranlib...not found Checking for program /usr/syscom/nsg/bin/ranlib...not found Checking for program /opt/modules/3.2.6.6/bin/ranlib...not found Checking for program /usr/lpp/mmfs/bin/ranlib...not found Checking for program /usr/local/bin/ranlib...not found Checking for program /usr/bin/ranlib...found Defined make macro "RANLIB" to "/usr/bin/ranlib" sh: /usr/bin/ar cr /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/libconf1.a /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conf1.o Executing: /usr/bin/ar cr /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/libconf1.a /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conf1.o sh: sh: /usr/bin/ranlib /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/libconf1.a Executing: /usr/bin/ranlib /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/libconf1.a sh: sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" extern int foo(int); int main() { int b = foo(1); if (b); ; return 0; } Pushing language C Popping language C sh: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o -L/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -lconf1 Executing: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o -L/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -lconf1 sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded output: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Pushing language C Popping language C in cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o -L/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -lconf1 Source: #include "confdefs.h" #include "conffix.h" extern int foo(int); int main() { int b = foo(1); if (b); ; return 0; } Defined make macro "AR_FLAGS" to "cr" Defined make macro "AR_LIB_SUFFIX" to "a" Popping language C ================================================================================ TEST checkSharedLinker from config.setCompilers(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/setCompilers.py:1212) TESTING: checkSharedLinker from config.setCompilers(config/BuildSystem/config/setCompilers.py:1212) Check that the linker can produce shared libraries Pushing language C Popping language C Pushing language CUDA Popping language CUDA Pushing language Cxx Popping language Cxx Pushing language FC Popping language FC Checking shared linker /usr/bin/ar using flags [] Checking for program /usr/bin/ar...found Defined make macro "LD_SHARED" to "/usr/bin/ar" sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" #include int foo(void) {printf("hello"); return 0;} Pushing language C Popping language C sh: /usr/bin/ar cr /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/libconftest.a /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o ; /usr/bin/ranlib /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/libconftest.a Executing: /usr/bin/ar cr /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/libconftest.a /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o ; /usr/bin/ranlib /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/libconftest.a sh: sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" int foo(void); int main() { int ret = foo(); if(ret);; return 0; } Pushing language C Popping language C sh: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o -L/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -lconftest Executing: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o -L/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -lconftest sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded output: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Pushing language C Popping language C in cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o -L/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -lconftest Source: #include "confdefs.h" #include "conffix.h" int foo(void); int main() { int ret = foo(); if(ret);; return 0; } Using shared linker /usr/bin/ar with flags [] and library extension a sh: uname -s Executing: uname -s sh: Linux ================================================================================ TEST checkSharedLinkerPaths from config.setCompilers(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/setCompilers.py:1290) TESTING: checkSharedLinkerPaths from config.setCompilers(config/BuildSystem/config/setCompilers.py:1290) Determine the shared linker path options - IRIX: -rpath - Linux, OSF: -Wl,-rpath, - Solaris: -R - FreeBSD: -Wl,-R, Pushing language C sh: uname -s Executing: uname -s sh: Linux sh: cc -V Executing: cc -V sh: Trying C linker flag -Wl,-rpath, sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language C Popping language C sh: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest -Wl,-rpath,/global/u2/m/madams/petsc_maint /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o Executing: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest -Wl,-rpath,/global/u2/m/madams/petsc_maint /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded output: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Pushing language C Popping language C in cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest -Wl,-rpath,/global/u2/m/madams/petsc_maint /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Valid C linker flag -Wl,-rpath,/global/u2/m/madams/petsc_maint Popping language C Pushing language Cxx sh: uname -s Executing: uname -s sh: Linux sh: cc -V Executing: cc -V sh: Trying Cxx linker flag -Wl,-rpath, sh: CC -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.cc Executing: CC -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.cc sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language CXX Popping language CXX sh: CC -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest -Wl,-rpath,/global/u2/m/madams/petsc_maint /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o Executing: CC -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest -Wl,-rpath,/global/u2/m/madams/petsc_maint /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded output: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Pushing language CXX Popping language CXX in CC -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest -Wl,-rpath,/global/u2/m/madams/petsc_maint /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Valid Cxx linker flag -Wl,-rpath,/global/u2/m/madams/petsc_maint Popping language Cxx Pushing language FC sh: uname -s Executing: uname -s sh: Linux sh: cc -V Executing: cc -V sh: Trying FC linker flag -Wl,-rpath, sh: ftn -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.F Executing: ftn -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.F sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: program main end Pushing language FC Popping language FC sh: ftn -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest -Wl,-rpath,/global/u2/m/madams/petsc_maint /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o Executing: ftn -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest -Wl,-rpath,/global/u2/m/madams/petsc_maint /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded output: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Pushing language FC Popping language FC in ftn -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest -Wl,-rpath,/global/u2/m/madams/petsc_maint /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o Source: program main end Valid FC linker flag -Wl,-rpath,/global/u2/m/madams/petsc_maint Popping language FC ================================================================================ TEST checkLibC from config.setCompilers(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/setCompilers.py:1325) TESTING: checkLibC from config.setCompilers(config/BuildSystem/config/setCompilers.py:1325) Test whether we need to explicitly include libc in shared linking - Mac OSX requires an explicit reference to libc for shared linking ================================================================================ TEST checkDynamicLinker from config.setCompilers(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/setCompilers.py:1374) TESTING: checkDynamicLinker from config.setCompilers(config/BuildSystem/config/setCompilers.py:1374) Check that the linker can dynamicaly load shared libraries Checking for header: dlfcn.h All intermediate test results are stored in /scratch/scratchdirs/madams/petsc-i5209_/config.headers sh: gcc -E -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c Executing: gcc -E -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c sh: # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" # 1 "" # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/confdefs.h" 1 # 2 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conffix.h" 1 # 3 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 # 1 "/usr/include/dlfcn.h" 1 3 4 # 23 "/usr/include/dlfcn.h" 3 4 # 1 "/usr/include/features.h" 1 3 4 # 347 "/usr/include/features.h" 3 4 # 1 "/usr/include/sys/cdefs.h" 1 3 4 # 353 "/usr/include/sys/cdefs.h" 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 354 "/usr/include/sys/cdefs.h" 2 3 4 # 348 "/usr/include/features.h" 2 3 4 # 371 "/usr/include/features.h" 3 4 # 1 "/usr/include/gnu/stubs.h" 1 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 5 "/usr/include/gnu/stubs.h" 2 3 4 # 1 "/usr/include/gnu/stubs-64.h" 1 3 4 # 10 "/usr/include/gnu/stubs.h" 2 3 4 # 372 "/usr/include/features.h" 2 3 4 # 24 "/usr/include/dlfcn.h" 2 3 4 # 1 "/opt/gcc/4.8.1/snos/lib/gcc/x86_64-suse-linux/4.8.1/include/stddef.h" 1 3 4 # 212 "/opt/gcc/4.8.1/snos/lib/gcc/x86_64-suse-linux/4.8.1/include/stddef.h" 3 4 typedef long unsigned int size_t; # 26 "/usr/include/dlfcn.h" 2 3 4 # 1 "/usr/include/bits/dlfcn.h" 1 3 4 # 29 "/usr/include/dlfcn.h" 2 3 4 # 53 "/usr/include/dlfcn.h" 3 4 extern void *dlopen (__const char *__file, int __mode) __attribute__ ((__nothrow__)); extern int dlclose (void *__handle) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern void *dlsym (void *__restrict __handle, __const char *__restrict __name) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (2))); # 83 "/usr/include/dlfcn.h" 3 4 extern char *dlerror (void) __attribute__ ((__nothrow__)); # 189 "/usr/include/dlfcn.h" 3 4 # 3 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 Defined "HAVE_DLFCN_H" to "1" Checking for function dlopen in library ['dl'] [] Pushing language C All intermediate test results are stored in /scratch/scratchdirs/madams/petsc-i5209_/config.libraries sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dlopen(); int main() { dlopen() ; return 0; } Pushing language C Popping language C sh: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o -ldl Executing: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o -ldl sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o: In function `main': conftest.c:(.text+0xa): warning: Using 'dlopen' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking output: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o: In function `main': conftest.c:(.text+0xa): warning: Using 'dlopen' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking } Pushing language C Popping language C in cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o -ldl Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dlopen(); int main() { dlopen() ; return 0; } Defined "HAVE_LIBDL" to "1" Popping language C Checking for function dlsym in library ['dl'] [] Pushing language C sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dlsym(); int main() { dlsym() ; return 0; } Pushing language C Popping language C sh: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o -ldl Executing: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o -ldl sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded output: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Pushing language C Popping language C in cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o -ldl Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dlsym(); int main() { dlsym() ; return 0; } Defined "HAVE_LIBDL" to "1" Popping language C Checking for function dlclose in library ['dl'] [] Pushing language C sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dlclose(); int main() { dlclose() ; return 0; } Pushing language C Popping language C sh: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o -ldl Executing: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o -ldl sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded output: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Pushing language C Popping language C in cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o -ldl Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char dlclose(); int main() { dlclose() ; return 0; } Defined "HAVE_LIBDL" to "1" Popping language C Adding ['dl'] to LIBS sh: uname -s Executing: uname -s sh: Linux Checking dynamic linker /usr/bin/ar using flags [] Checking for program /usr/bin/ar...found Defined make macro "DYNAMICLINKER" to "/usr/bin/ar" sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" #include int foo(void) {printf("test");return 0;} Pushing language C Popping language C Pushing language CUDA Popping language CUDA Pushing language Cxx Popping language Cxx Pushing language FC Popping language FC Pushing language C Popping language C sh: /usr/bin/ar -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/libconftest.so /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o -ldl Executing: /usr/bin/ar -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/libconftest.so /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o -ldl sh: Possible ERROR while running linker: /usr/bin/ar: no operation specified output: ret = 256 error message = {/usr/bin/ar: no operation specified } Pushing language C Popping language C in cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o -ldl Source: #include "confdefs.h" #include "conffix.h" #include int foo(void) {printf("test");return 0;} Checking dynamic linker cc using flags ['-shared'] Checking for program /usr/common/usg/darshan/2.2.6/bin/cc...not found Checking for program /scratch/altd/1.0/bin/cc...not found Checking for program /usr/common/usg/bin/cc...not found Checking for program /usr/common/mss/bin/cc...not found Checking for program /usr/common/nsg/bin/cc...not found Checking for program /global/common/carver/usg/matlab/R2012a/bin/cc...not found Checking for program /opt/cray/netcdf/4.3.0/bin/cc...not found Checking for program /opt/cray/hdf5/1.8.11/bin/cc...not found Checking for program /usr/common/usg/allineatools/4.2-34404/bin/cc...not found Checking for program /usr/common/usg/ipm/2.00/bin/cc...not found Checking for program /opt/cray/papi/5.1.2/perf_events/no-cuda/bin/cc...not found Checking for program /usr/common/graphics/visit/bin/cc...not found Checking for program /usr/common/usg/cmake/2.8.10.1/bin/cc...not found Checking for program /opt/cray/atp/1.7.0/bin/cc...not found Checking for program /opt/cray/switch/1.0-1.0402.45840.2.63.gem/bin/cc...not found Checking for program /opt/cray/shared-root/1.0-1.0402.46893.3.17.gem/bin/cc...not found Checking for program /opt/cray/pdsh/2.26-1.0402.45278.1.1.gem/bin/cc...not found Checking for program /opt/cray/nodehealth/5.1-1.0402.45895.3.76.gem/bin/cc...not found Checking for program /opt/cray/lbcd/2.1-1.0402.45245.1.2.gem/bin/cc...not found Checking for program /opt/cray/hosts/1.0-1.0402.45251.1.86.gem/bin/cc...not found Checking for program /opt/cray/configuration/1.0-1.0402.45284.1.2.gem/bin/cc...not found Checking for program /opt/cray/ccm/default/sbin/cc...not found Checking for program /opt/cray/ccm/default/bin/cc...not found Checking for program /opt/cray/audit/1.0.0-1.0402.45273.1.86.gem/bin/cc...not found Checking for program /opt/cray/rca/1.0.0-2.0402.47290.7.1.gem/bin/cc...not found Checking for program /opt/cray/csa/3.0.0-1_2.0402.45268.1.90.gem/sbin/cc...not found Checking for program /opt/cray/csa/3.0.0-1_2.0402.45268.1.90.gem/bin/cc...not found Checking for program /opt/cray/job/1.5.5-0.1_2.0402.45272.1.5.gem/bin/cc...not found Checking for program /opt/cray/xpmem/0.1-2.0402.45248.1.5.gem/bin/cc...not found Checking for program /opt/cray/dmapp/4.0.1-1.0402.7784.4.1.gem/bin/cc...not found Checking for program /opt/cray/pmi/4.0.1-1.0000.9753.86.3.gem/bin/cc...not found Checking for program /opt/cray/ugni/5.0-1.0402.7551.1.10.gem/bin/cc...not found Checking for program /opt/cray/udreg/2.3.2-1.0402.7546.1.5.gem/bin/cc...not found Checking for program /opt/gcc/4.8.1/bin/cc...not found Checking for program /opt/cray/xt-asyncpe/5.23/bin/cc...found Defined make macro "DYNAMICLINKER" to "cc" sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language C Popping language C sh: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest -shared /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o -ldl Executing: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest -shared /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o -ldl sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded /usr/bin/ld: /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o: relocation R_X86_64_32 against `.text' can not be used when making a shared object; recompile with -fPIC /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o: could not read symbols: Bad value collect2: error: ld returned 1 exit status output: ret = 256 error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded /usr/bin/ld: /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o: relocation R_X86_64_32 against `.text' can not be used when making a shared object; recompile with -fPIC /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o: could not read symbols: Bad value collect2: error: ld returned 1 exit status } Pushing language C Popping language C in cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest -shared /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o -ldl Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Rejecting linker flag -shared due to nonzero status from link sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" #include int foo(void) {printf("test");return 0;} Pushing language C Popping language C sh: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/libconftest.so /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o -ldl Executing: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/libconftest.so /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o -ldl sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded /usr/lib/../lib64/crt1.o: In function `_start': /usr/src/packages/BUILD/glibc-2.11.3/csu/../sysdeps/x86_64/elf/start.S:109: undefined reference to `main' /usr/bin/ld: link errors found, deleting executable `/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/libconftest.so' collect2: error: ld returned 1 exit status output: ret = 256 error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded /usr/lib/../lib64/crt1.o: In function `_start': /usr/src/packages/BUILD/glibc-2.11.3/csu/../sysdeps/x86_64/elf/start.S:109: undefined reference to `main' /usr/bin/ld: link errors found, deleting executable `/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/libconftest.so' collect2: error: ld returned 1 exit status } Pushing language C Popping language C in cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o -ldl Source: #include "confdefs.h" #include "conffix.h" #include int foo(void) {printf("test");return 0;} Unable to find working dynamic linker ================================================================================ TEST output from config.setCompilers(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/setCompilers.py:1420) TESTING: output from config.setCompilers(config/BuildSystem/config/setCompilers.py:1420) Output module data as defines and substitutions Substituting "CC" with "cc" Substituting "CFLAGS" with "" Defined make macro "CC_LINKER_SLFLAG" to "-Wl,-rpath," Substituting "CPP" with "gcc -E" Substituting "CPPFLAGS" with "" Substituting "CXX" with "CC" Substituting "CXX_CXXFLAGS" with "" Substituting "CXXFLAGS" with "" Substituting "CXX_LINKER_SLFLAG" with "-Wl,-rpath," Substituting "CXXCPP" with "g++ -E" Substituting "CXXCPPFLAGS" with "" Substituting "FC" with "ftn" Substituting "FFLAGS" with "" Defined make macro "FC_LINKER_SLFLAG" to "-Wl,-rpath," Substituting "LDFLAGS" with "" Substituting "LIBS" with "-ldl " Substituting "SHARED_LIBRARY_FLAG" with "" ================================================================================ TEST configureCompilerFlags from config.compilerFlags(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/compilerFlags.py:65) TESTING: configureCompilerFlags from config.compilerFlags(config/BuildSystem/config/compilerFlags.py:65) Get the default compiler flags Pushing language C sh: cc --version Executing: cc --version sh: gcc (GCC) 4.8.1 20130531 (Cray Inc.) Copyright (C) 2013 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. getCompilerVersion: cc gcc (GCC) 4.8.1 20130531 (Cray Inc.) sh: cc --help Executing: cc --help sh: Usage: gcc [options] file... Options: -pass-exit-codes Exit with highest error code from a phase --help Display this information --target-help Display target specific command line options --help={common|optimizers|params|target|warnings|[^]{joined|separate|undocumented}}[,...] Display specific types of command line options (Use '-v --help' to display command line options of sub-processes) --version Display compiler version information -dumpspecs Display all of the built in spec strings -dumpversion Display the version of the compiler -dumpmachine Display the compiler's target processor -print-search-dirs Display the directories in the compiler's search path -print-libgcc-file-name Display the name of the compiler's companion library -print-file-name= Display the full path to library -print-prog-name= Display the full path to compiler component -print-multiarch Display the target's normalized GNU triplet, used as a component in the library path -print-multi-directory Display the root directory for versions of libgcc -print-multi-lib Display the mapping between command line options and multiple library search directories -print-multi-os-directory Display the relative path to OS libraries -print-sysroot Display the target libraries directory -print-sysroot-headers-suffix Display the sysroot suffix used to find headers -Wa, Pass comma-separated on to the assembler -Wp, Pass comma-separated on to the preprocessor -Wl, Pass comma-separated on to the linker -Xassembler Pass on to the assembler -Xpreprocessor Pass on to the preprocessor -Xlinker Pass on to the linker -save-temps Do not delete intermediate files -save-temps= Do not delete intermediate files -no-canonical-prefixes Do not canonicalize paths when building relative prefixes to other gcc components -pipe Use pipes rather than intermediate files -time Time the execution of each subprocess -specs= Override built-in specs with the contents of -std= Assume that the input sources are for --sysroot= Use as the root directory for headers and libraries -B Add to the compiler's search paths -v Display the programs invoked by the compiler -### Like -v but options quoted and commands not executed -E Preprocess only; do not compile, assemble or link -S Compile only; do not assemble or link -c Compile and assemble, but do not link -o Place the output into -pie Create a position independent executable -shared Create a shared library -x Specify the language of the following input files Permissible languages include: c c++ assembler none 'none' means revert to the default behavior of guessing the language based on the file's extension Options starting with -g, -f, -m, -O, -W, or --param are automatically passed on to the various sub-processes invoked by gcc. In order to pass other options on to these processes the -W options must be used. For bug reporting instructions, please see: . Trying C compiler flag -Wall sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -Wall /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -Wall /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Added C compiler flag -Wall Trying C compiler flag -Wwrite-strings sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -Wall -Wwrite-strings /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -Wall -Wwrite-strings /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Added C compiler flag -Wwrite-strings Trying C compiler flag -Wno-strict-aliasing sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -Wall -Wwrite-strings -Wno-strict-aliasing /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -Wall -Wwrite-strings -Wno-strict-aliasing /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Added C compiler flag -Wno-strict-aliasing Trying C compiler flag -Wno-unknown-pragmas sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Added C compiler flag -Wno-unknown-pragmas Trying C compiler flag -O3 -ffast-math -funroll-loops sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Added C compiler flag -O3 -ffast-math -funroll-loops Popping language C Pushing language Cxx sh: CC --version Executing: CC --version sh: g++ (GCC) 4.8.1 20130531 (Cray Inc.) Copyright (C) 2013 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. getCompilerVersion: CC g++ (GCC) 4.8.1 20130531 (Cray Inc.) sh: CC --help Executing: CC --help sh: Usage: g++ [options] file... Options: -pass-exit-codes Exit with highest error code from a phase --help Display this information --target-help Display target specific command line options --help={common|optimizers|params|target|warnings|[^]{joined|separate|undocumented}}[,...] Display specific types of command line options (Use '-v --help' to display command line options of sub-processes) --version Display compiler version information -dumpspecs Display all of the built in spec strings -dumpversion Display the version of the compiler -dumpmachine Display the compiler's target processor -print-search-dirs Display the directories in the compiler's search path -print-libgcc-file-name Display the name of the compiler's companion library -print-file-name= Display the full path to library -print-prog-name= Display the full path to compiler component -print-multiarch Display the target's normalized GNU triplet, used as a component in the library path -print-multi-directory Display the root directory for versions of libgcc -print-multi-lib Display the mapping between command line options and multiple library search directories -print-multi-os-directory Display the relative path to OS libraries -print-sysroot Display the target libraries directory -print-sysroot-headers-suffix Display the sysroot suffix used to find headers -Wa, Pass comma-separated on to the assembler -Wp, Pass comma-separated on to the preprocessor -Wl, Pass comma-separated on to the linker -Xassembler Pass on to the assembler -Xpreprocessor Pass on to the preprocessor -Xlinker Pass on to the linker -save-temps Do not delete intermediate files -save-temps= Do not delete intermediate files -no-canonical-prefixes Do not canonicalize paths when building relative prefixes to other gcc components -pipe Use pipes rather than intermediate files -time Time the execution of each subprocess -specs= Override built-in specs with the contents of -std= Assume that the input sources are for --sysroot= Use as the root directory for headers and libraries -B Add to the compiler's search paths -v Display the programs invoked by the compiler -### Like -v but options quoted and commands not executed -E Preprocess only; do not compile, assemble or link -S Compile only; do not assemble or link -c Compile and assemble, but do not link -o Place the output into -pie Create a position independent executable -shared Create a shared library -x Specify the language of the following input files Permissible languages include: c c++ assembler none 'none' means revert to the default behavior of guessing the language based on the file's extension Options starting with -g, -f, -m, -O, -W, or --param are automatically passed on to the various sub-processes invoked by g++. In order to pass other options on to these processes the -W options must be used. For bug reporting instructions, please see: . Trying Cxx compiler flag -Wall sh: CC -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -Wall /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.cc Executing: CC -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -Wall /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.cc sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Added Cxx compiler flag -Wall Trying Cxx compiler flag -Wwrite-strings sh: CC -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -Wall -Wwrite-strings /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.cc Executing: CC -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -Wall -Wwrite-strings /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.cc sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Added Cxx compiler flag -Wwrite-strings Trying Cxx compiler flag -Wno-strict-aliasing sh: CC -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -Wall -Wwrite-strings -Wno-strict-aliasing /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.cc Executing: CC -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -Wall -Wwrite-strings -Wno-strict-aliasing /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.cc sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Added Cxx compiler flag -Wno-strict-aliasing Trying Cxx compiler flag -Wno-unknown-pragmas sh: CC -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.cc Executing: CC -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.cc sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Added Cxx compiler flag -Wno-unknown-pragmas Trying Cxx compiler flag -O3 -ffast-math -funroll-loops sh: CC -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.cc Executing: CC -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.cc sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Added Cxx compiler flag -O3 -ffast-math -funroll-loops Popping language Cxx Pushing language FC sh: ftn --version Executing: ftn --version sh: GNU Fortran (GCC) 4.8.1 20130531 (Cray Inc.) Copyright (C) 2013 Free Software Foundation, Inc. GNU Fortran comes with NO WARRANTY, to the extent permitted by law. You may redistribute copies of GNU Fortran under the terms of the GNU General Public License. For more information about these matters, see the file named COPYING getCompilerVersion: ftn GNU Fortran (GCC) 4.8.1 20130531 (Cray Inc.) sh: ftn --help Executing: ftn --help sh: Usage: gfortran [options] file... Options: -pass-exit-codes Exit with highest error code from a phase --help Display this information --target-help Display target specific command line options --help={common|optimizers|params|target|warnings|[^]{joined|separate|undocumented}}[,...] Display specific types of command line options (Use '-v --help' to display command line options of sub-processes) --version Display compiler version information -dumpspecs Display all of the built in spec strings -dumpversion Display the version of the compiler -dumpmachine Display the compiler's target processor -print-search-dirs Display the directories in the compiler's search path -print-libgcc-file-name Display the name of the compiler's companion library -print-file-name= Display the full path to library -print-prog-name= Display the full path to compiler component -print-multiarch Display the target's normalized GNU triplet, used as a component in the library path -print-multi-directory Display the root directory for versions of libgcc -print-multi-lib Display the mapping between command line options and multiple library search directories -print-multi-os-directory Display the relative path to OS libraries -print-sysroot Display the target libraries directory -print-sysroot-headers-suffix Display the sysroot suffix used to find headers -Wa, Pass comma-separated on to the assembler -Wp, Pass comma-separated on to the preprocessor -Wl, Pass comma-separated on to the linker -Xassembler Pass on to the assembler -Xpreprocessor Pass on to the preprocessor -Xlinker Pass on to the linker -save-temps Do not delete intermediate files -save-temps= Do not delete intermediate files -no-canonical-prefixes Do not canonicalize paths when building relative prefixes to other gcc components -pipe Use pipes rather than intermediate files -time Time the execution of each subprocess -specs= Override built-in specs with the contents of -std= Assume that the input sources are for --sysroot= Use as the root directory for headers and libraries -B Add to the compiler's search paths -v Display the programs invoked by the compiler -### Like -v but options quoted and commands not executed -E Preprocess only; do not compile, assemble or link -S Compile only; do not assemble or link -c Compile and assemble, but do not link -o Place the output into -pie Create a position independent executable -shared Create a shared library -x Specify the language of the following input files Permissible languages include: c c++ assembler none 'none' means revert to the default behavior of guessing the language based on the file's extension Options starting with -g, -f, -m, -O, -W, or --param are automatically passed on to the various sub-processes invoked by gfortran. In order to pass other options on to these processes the -W options must be used. For bug reporting instructions, please see: . sh: ftn --version Executing: ftn --version sh: GNU Fortran (GCC) 4.8.1 20130531 (Cray Inc.) Copyright (C) 2013 Free Software Foundation, Inc. GNU Fortran comes with NO WARRANTY, to the extent permitted by law. You may redistribute copies of GNU Fortran under the terms of the GNU General Public License. For more information about these matters, see the file named COPYING sh: ftn --version Executing: ftn --version sh: GNU Fortran (GCC) 4.8.1 20130531 (Cray Inc.) Copyright (C) 2013 Free Software Foundation, Inc. GNU Fortran comes with NO WARRANTY, to the extent permitted by law. You may redistribute copies of GNU Fortran under the terms of the GNU General Public License. For more information about these matters, see the file named COPYING Trying FC compiler flag -Wall sh: ftn -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -Wall /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.F Executing: ftn -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -Wall /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.F sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: program main end Added FC compiler flag -Wall Trying FC compiler flag -Wno-unused-variable sh: ftn -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -Wall -Wno-unused-variable /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.F Executing: ftn -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -Wall -Wno-unused-variable /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.F sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: program main end Added FC compiler flag -Wno-unused-variable Trying FC compiler flag -Wno-unused-dummy-argument sh: ftn -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -Wall -Wno-unused-variable -Wno-unused-dummy-argument /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.F Executing: ftn -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -Wall -Wno-unused-variable -Wno-unused-dummy-argument /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.F sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: program main end Added FC compiler flag -Wno-unused-dummy-argument Trying FC compiler flag -O3 -ffast-math -funroll-loops sh: ftn -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -Wall -Wno-unused-variable -Wno-unused-dummy-argument -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.F Executing: ftn -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -Wall -Wno-unused-variable -Wno-unused-dummy-argument -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.F sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: program main end Added FC compiler flag -O3 -ffast-math -funroll-loops Popping language FC ================================================================================ TEST configureDebugging from PETSc.utilities.debugging(/global/u2/m/madams/petsc_maint/config/PETSc/utilities/debugging.py:25) TESTING: configureDebugging from PETSc.utilities.debugging(config/PETSc/utilities/debugging.py:25) Defined "USE_ERRORCHECKING" to "1" =============================================================================== WARNING! Compiling PETSc with no debugging, this should only be done for timing and production runs. All development should be done when configured using --with-debugging=1 =============================================================================== ================================================================================ TEST configureArchitecture from PETSc.utilities.arch(/global/u2/m/madams/petsc_maint/config/PETSc/utilities/arch.py:32) TESTING: configureArchitecture from PETSc.utilities.arch(config/PETSc/utilities/arch.py:32) Checks PETSC_ARCH and sets if not set Defined "ARCH" to ""arch-xe6-opt64"" ================================================================================ TEST checkSharedDynamicPicOptions from PETSc.utilities.sharedLibraries(/global/u2/m/madams/petsc_maint/config/PETSc/utilities/sharedLibraries.py:42) TESTING: checkSharedDynamicPicOptions from PETSc.utilities.sharedLibraries(config/PETSc/utilities/sharedLibraries.py:42) ================================================================================ TEST configureSharedLibraries from PETSc.utilities.sharedLibraries(/global/u2/m/madams/petsc_maint/config/PETSc/utilities/sharedLibraries.py:63) TESTING: configureSharedLibraries from PETSc.utilities.sharedLibraries(config/PETSc/utilities/sharedLibraries.py:63) Checks whether shared libraries should be used, for which you must - Specify --with-shared-libraries - Have found a working shared linker Defines PETSC_USE_SHARED_LIBRARIES if they are used Defined make rule "shared_arch" with dependencies "" and code [] Defined make macro "BUILDSHAREDLIB" to "no" Defined "HAVE_SHARED_LIBRARIES" to "1" Shared libraries - disabled ================================================================================ TEST configureDynamicLibraries from PETSc.utilities.sharedLibraries(/global/u2/m/madams/petsc_maint/config/PETSc/utilities/sharedLibraries.py:102) TESTING: configureDynamicLibraries from PETSc.utilities.sharedLibraries(config/PETSc/utilities/sharedLibraries.py:102) Checks whether dynamic loading should be used, for which you must - Specify --with-dynamic-loading - Have found a working dynamic linker (with dlfcn.h and libdl) Defines PETSC_USE_DYNAMIC_LIBRARIES if they are used Dynamic loading - disabled ================================================================================ TEST configureBmakeDir from PETSc.utilities.bmakeDir(/global/u2/m/madams/petsc_maint/config/PETSc/utilities/bmakeDir.py:26) TESTING: configureBmakeDir from PETSc.utilities.bmakeDir(config/PETSc/utilities/bmakeDir.py:26) Makes $PETSC_ARCH and subdirectories if it does not exist Changed persistence directory to arch-xe6-opt64/conf sh: cc --help Executing: cc --help sh: Usage: gcc [options] file... Options: -pass-exit-codes Exit with highest error code from a phase --help Display this information --target-help Display target specific command line options --help={common|optimizers|params|target|warnings|[^]{joined|separate|undocumented}}[,...] Display specific types of command line options (Use '-v --help' to display command line options of sub-processes) --version Display compiler version information -dumpspecs Display all of the built in spec strings -dumpversion Display the version of the compiler -dumpmachine Display the compiler's target processor -print-search-dirs Display the directories in the compiler's search path -print-libgcc-file-name Display the name of the compiler's companion library -print-file-name= Display the full path to library -print-prog-name= Display the full path to compiler component -print-multiarch Display the target's normalized GNU triplet, used as a component in the library path -print-multi-directory Display the root directory for versions of libgcc -print-multi-lib Display the mapping between command line options and multiple library search directories -print-multi-os-directory Display the relative path to OS libraries -print-sysroot Display the target libraries directory -print-sysroot-headers-suffix Display the sysroot suffix used to find headers -Wa, Pass comma-separated on to the assembler -Wp, Pass comma-separated on to the preprocessor -Wl, Pass comma-separated on to the linker -Xassembler Pass on to the assembler -Xpreprocessor Pass on to the preprocessor -Xlinker Pass on to the linker -save-temps Do not delete intermediate files -save-temps= Do not delete intermediate files -no-canonical-prefixes Do not canonicalize paths when building relative prefixes to other gcc components -pipe Use pipes rather than intermediate files -time Time the execution of each subprocess -specs= Override built-in specs with the contents of -std= Assume that the input sources are for --sysroot= Use as the root directory for headers and libraries -B Add to the compiler's search paths -v Display the programs invoked by the compiler -### Like -v but options quoted and commands not executed -E Preprocess only; do not compile, assemble or link -S Compile only; do not assemble or link -c Compile and assemble, but do not link -o Place the output into -pie Create a position independent executable -shared Create a shared library -x Specify the language of the following input files Permissible languages include: c c++ assembler none 'none' means revert to the default behavior of guessing the language based on the file's extension Options starting with -g, -f, -m, -O, -W, or --param are automatically passed on to the various sub-processes invoked by gcc. In order to pass other options on to these processes the -W options must be used. For bug reporting instructions, please see: . ================================================================================ TEST checkRestrict from config.compilers(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/compilers.py:134) TESTING: checkRestrict from config.compilers(config/BuildSystem/config/compilers.py:134) Check for the C/CXX restrict keyword Pushing language C All intermediate test results are stored in /scratch/scratchdirs/madams/petsc-i5209_/config.compilers sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.c sh: Possible ERROR while running compiler: ret = 256 error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.c: In function 'main': /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.c:5:18: error: expected '=', ',', ';', 'asm' or '__attribute__' before 'x' float * restrict x;; ^ /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.c:5:18: error: 'x' undeclared (first use in this function) /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.c:5:18: note: each undeclared identifier is reported only once for each function it appears in } Source: #include "confdefs.h" #include "conffix.h" int main() { float * restrict x;; return 0; } sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.c: In function 'main': /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.c:5:23: warning: unused variable 'x' [-Wunused-variable] float * __restrict__ x;; ^ } Source: #include "confdefs.h" #include "conffix.h" int main() { float * __restrict__ x;; return 0; } compilers: Set C restrict keyword to __restrict__ Defined "C_RESTRICT" to " __restrict__" Popping language C ================================================================================ TEST checkCFormatting from config.compilers(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/compilers.py:306) TESTING: checkCFormatting from config.compilers(config/BuildSystem/config/compilers.py:306) Activate format string checking if using the GNU compilers ================================================================================ TEST checkCStaticInline from config.compilers(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/compilers.py:105) TESTING: checkCStaticInline from config.compilers(config/BuildSystem/config/compilers.py:105) Check for C keyword: static inline Pushing language C sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.c: In function 'main': /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.c:6:5: warning: unused variable 'i' [-Wunused-variable] int i = foo(1);; ^ } Source: #include "confdefs.h" #include "conffix.h" static inline int foo(int a) {return a;} int main() { int i = foo(1);; return 0; } compilers: Set C StaticInline keyword to static inline Popping language C Defined "C_STATIC_INLINE" to "static inline" ================================================================================ TEST checkDynamicLoadFlag from config.compilers(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/compilers.py:317) TESTING: checkDynamicLoadFlag from config.compilers(config/BuildSystem/config/compilers.py:317) Checks that dlopen() takes RTLD_XXX, and defines PETSC_HAVE_RTLD_XXX if it does ================================================================================ TEST checkDependencyGenerationFlag from config.compilers(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/compilers.py:1282) TESTING: checkDependencyGenerationFlag from config.compilers(config/BuildSystem/config/compilers.py:1282) Check if -MMD works for dependency generation, and add it if it does Pushing language C Trying C compiler flag -MMD sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language C Popping language C sh: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest -MMD -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o -ldl Executing: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest -MMD -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o -ldl sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded output: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Pushing language C Popping language C in cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest -MMD -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o -ldl Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Valid C linker flag -MMD Testing C compiler flag -MMD sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops -MMD /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops -MMD /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Popping language C Pushing language Cxx Trying Cxx compiler flag -MMD sh: CC -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.cc Executing: CC -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.cc sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Pushing language CXX Popping language CXX sh: CC -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest -MMD -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o -ldl Executing: CC -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest -MMD -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o -ldl sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded output: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Pushing language CXX Popping language CXX in CC -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest -MMD -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o -ldl Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Valid Cxx linker flag -MMD Testing Cxx compiler flag -MMD sh: CC -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops -MMD /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.cc Executing: CC -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops -MMD /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.cc sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" int main() { ; return 0; } Popping language Cxx Pushing language FC Trying FC compiler flag -MMD sh: ftn -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -Wall -Wno-unused-variable -Wno-unused-dummy-argument -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.F Executing: ftn -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -Wall -Wno-unused-variable -Wno-unused-dummy-argument -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.F sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: program main end Pushing language FC Popping language FC sh: ftn -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest -MMD -Wall -Wno-unused-variable -Wno-unused-dummy-argument -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o -ldl Executing: ftn -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest -MMD -Wall -Wno-unused-variable -Wno-unused-dummy-argument -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o -ldl sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded output: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Pushing language FC Popping language FC in ftn -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest -MMD -Wall -Wno-unused-variable -Wno-unused-dummy-argument -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o -ldl Source: program main end Valid FC linker flag -MMD Testing FC compiler flag -MMD sh: ftn -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -Wall -Wno-unused-variable -Wno-unused-dummy-argument -O3 -ffast-math -funroll-loops -MMD /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.F Executing: ftn -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -Wall -Wno-unused-variable -Wno-unused-dummy-argument -O3 -ffast-math -funroll-loops -MMD /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.F sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: program main end Popping language FC sh: CC --help Executing: CC --help sh: Usage: g++ [options] file... Options: -pass-exit-codes Exit with highest error code from a phase --help Display this information --target-help Display target specific command line options --help={common|optimizers|params|target|warnings|[^]{joined|separate|undocumented}}[,...] Display specific types of command line options (Use '-v --help' to display command line options of sub-processes) --version Display compiler version information -dumpspecs Display all of the built in spec strings -dumpversion Display the version of the compiler -dumpmachine Display the compiler's target processor -print-search-dirs Display the directories in the compiler's search path -print-libgcc-file-name Display the name of the compiler's companion library -print-file-name= Display the full path to library -print-prog-name= Display the full path to compiler component -print-multiarch Display the target's normalized GNU triplet, used as a component in the library path -print-multi-directory Display the root directory for versions of libgcc -print-multi-lib Display the mapping between command line options and multiple library search directories -print-multi-os-directory Display the relative path to OS libraries -print-sysroot Display the target libraries directory -print-sysroot-headers-suffix Display the sysroot suffix used to find headers -Wa, Pass comma-separated on to the assembler -Wp, Pass comma-separated on to the preprocessor -Wl, Pass comma-separated on to the linker -Xassembler Pass on to the assembler -Xpreprocessor Pass on to the preprocessor -Xlinker Pass on to the linker -save-temps Do not delete intermediate files -save-temps= Do not delete intermediate files -no-canonical-prefixes Do not canonicalize paths when building relative prefixes to other gcc components -pipe Use pipes rather than intermediate files -time Time the execution of each subprocess -specs= Override built-in specs with the contents of -std= Assume that the input sources are for --sysroot= Use as the root directory for headers and libraries -B Add to the compiler's search paths -v Display the programs invoked by the compiler -### Like -v but options quoted and commands not executed -E Preprocess only; do not compile, assemble or link -S Compile only; do not assemble or link -c Compile and assemble, but do not link -o Place the output into -pie Create a position independent executable -shared Create a shared library -x Specify the language of the following input files Permissible languages include: c c++ assembler none 'none' means revert to the default behavior of guessing the language based on the file's extension Options starting with -g, -f, -m, -O, -W, or --param are automatically passed on to the various sub-processes invoked by g++. In order to pass other options on to these processes the -W options must be used. For bug reporting instructions, please see: . ================================================================================ TEST checkRestrict from config.compilers(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/compilers.py:134) TESTING: checkRestrict from config.compilers(config/BuildSystem/config/compilers.py:134) Check for the C/CXX restrict keyword Pushing language Cxx sh: CC -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.cc Executing: CC -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.cc sh: Possible ERROR while running compiler: ret = 256 error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.cc: In function 'int main()': /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.cc:5:18: error: expected initializer before 'x' float * restrict x;; ^ } Source: #include "confdefs.h" #include "conffix.h" int main() { float * restrict x;; return 0; } sh: CC -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.cc Executing: CC -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.cc sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.cc: In function 'int main()': /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.cc:5:23: warning: unused variable 'x' [-Wunused-variable] float * __restrict__ x;; ^ } Source: #include "confdefs.h" #include "conffix.h" int main() { float * __restrict__ x;; return 0; } compilers: Set Cxx restrict keyword to __restrict__ Defined "CXX_RESTRICT" to " __restrict__" Popping language Cxx ================================================================================ TEST checkCxxNamespace from config.compilers(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/compilers.py:355) TESTING: checkCxxNamespace from config.compilers(config/BuildSystem/config/compilers.py:355) Checks that C++ compiler supports namespaces, and if it does defines HAVE_CXX_NAMESPACE Pushing language Cxx sh: CC -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.cc Executing: CC -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.cc sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" namespace petsc {int dummy;} int main() { ; return 0; } sh: CC -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.cc Executing: CC -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.cc sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" template struct a {}; namespace trouble{ template struct a : public ::a {}; } trouble::a uugh; int main() { ; return 0; } Popping language Cxx compilers: C++ has namespaces Defined "HAVE_CXX_NAMESPACE" to "1" ================================================================================ TEST checkCxxOptionalExtensions from config.compilers(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/compilers.py:330) TESTING: checkCxxOptionalExtensions from config.compilers(config/BuildSystem/config/compilers.py:330) Check whether the C++ compiler (IBM xlC, OSF5) need special flag for .c files which contain C++ Pushing language Cxx sh: CC -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.c Executing: CC -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" int main() { class somename { int i; };; return 0; } Added Cxx compiler flag Popping language Cxx ================================================================================ TEST checkCxxStaticInline from config.compilers(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/compilers.py:119) TESTING: checkCxxStaticInline from config.compilers(config/BuildSystem/config/compilers.py:119) Check for C++ keyword: static inline Pushing language Cxx sh: CC -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.cc Executing: CC -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.cc sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.cc: In function 'int main()': /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.cc:6:5: warning: unused variable 'i' [-Wunused-variable] int i = foo(1);; ^ } Source: #include "confdefs.h" #include "conffix.h" static inline int foo(int a) {return a;} int main() { int i = foo(1);; return 0; } compilers: Set Cxx StaticInline keyword to static inline Popping language Cxx Defined "CXX_STATIC_INLINE" to "static inline" ================================================================================ TEST checkFortranTypeSizes from config.compilers(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/compilers.py:528) TESTING: checkFortranTypeSizes from config.compilers(config/BuildSystem/config/compilers.py:528) Check whether real*8 is supported and suggest flags which will allow support Pushing language FC sh: ftn -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -Wall -Wno-unused-variable -Wno-unused-dummy-argument -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.F Executing: ftn -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -Wall -Wno-unused-variable -Wno-unused-dummy-argument -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.F sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: program main real*8 variable end Popping language FC ================================================================================ TEST checkFortranNameMangling from config.compilers(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/compilers.py:587) TESTING: checkFortranNameMangling from config.compilers(config/BuildSystem/config/compilers.py:587) Checks Fortran name mangling, and defines HAVE_FORTRAN_UNDERSCORE, HAVE_FORTRAN_NOUNDERSCORE, HAVE_FORTRAN_CAPS, or HAVE_FORTRAN_STDCALL Testing Fortran mangling type underscore with code void d1chk_(void){return;} Pushing language C sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" void d1chk_(void){return;} Popping language C Pushing language FC sh: ftn -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -Wall -Wno-unused-variable -Wno-unused-dummy-argument -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.F Executing: ftn -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -Wall -Wno-unused-variable -Wno-unused-dummy-argument -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.F sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: program main call d1chk() end Pushing language FC Popping language FC sh: ftn -o /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest -Wall -Wno-unused-variable -Wno-unused-dummy-argument -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.o /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/confc.o -ldl Executing: ftn -o /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest -Wall -Wno-unused-variable -Wno-unused-dummy-argument -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.o /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/confc.o -ldl sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded output: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Pushing language FC Popping language FC in ftn -o /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest -Wall -Wno-unused-variable -Wno-unused-dummy-argument -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.o /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/confc.o -ldl Source: program main call d1chk() end Popping language FC compilers: Fortran name mangling is underscore Defined "HAVE_FORTRAN_UNDERSCORE" to "1" ================================================================================ TEST checkFortranNameManglingDouble from config.compilers(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/compilers.py:624) TESTING: checkFortranNameManglingDouble from config.compilers(config/BuildSystem/config/compilers.py:624) Checks if symbols containing an underscore append an extra underscore, and defines HAVE_FORTRAN_UNDERSCORE_UNDERSCORE if necessary Pushing language C sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" void d1_chk__(void){return;} Popping language C Pushing language FC sh: ftn -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -Wall -Wno-unused-variable -Wno-unused-dummy-argument -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.F Executing: ftn -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -Wall -Wno-unused-variable -Wno-unused-dummy-argument -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.F sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: program main call d1_chk() end Pushing language FC Popping language FC sh: ftn -o /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest -Wall -Wno-unused-variable -Wno-unused-dummy-argument -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.o /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/confc.o -ldl Executing: ftn -o /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest -Wall -Wno-unused-variable -Wno-unused-dummy-argument -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.o /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/confc.o -ldl sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.o: In function `main': conftest.F:(.text.startup+0x1b): undefined reference to `d1_chk_' /usr/bin/ld: link errors found, deleting executable `/scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest' collect2: error: ld returned 1 exit status output: ret = 256 error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.o: In function `main': conftest.F:(.text.startup+0x1b): undefined reference to `d1_chk_' /usr/bin/ld: link errors found, deleting executable `/scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest' collect2: error: ld returned 1 exit status } Pushing language FC Popping language FC in ftn -o /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest -Wall -Wno-unused-variable -Wno-unused-dummy-argument -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.o /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/confc.o -ldl Source: program main call d1_chk() end Popping language FC ================================================================================ TEST checkFortranPreprocessor from config.compilers(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/compilers.py:634) TESTING: checkFortranPreprocessor from config.compilers(config/BuildSystem/config/compilers.py:634) Determine if Fortran handles preprocessing properly Pushing language FC sh: ftn -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -Wall -Wno-unused-variable -Wno-unused-dummy-argument -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.F Executing: ftn -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -Wall -Wno-unused-variable -Wno-unused-dummy-argument -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.F sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: program main #define dummy dummy #ifndef dummy fooey #endif end Added FC compiler flag Popping language FC compilers: Fortran uses CPP preprocessor ================================================================================ TEST checkFortranDefineCompilerOption from config.compilers(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/compilers.py:655) TESTING: checkFortranDefineCompilerOption from config.compilers(config/BuildSystem/config/compilers.py:655) Check if -WF,-Dfoobar or -Dfoobar is the compiler option to define a macro Pushing language FC sh: ftn -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -Wall -Wno-unused-variable -Wno-unused-dummy-argument -O3 -ffast-math -funroll-loops -DTesting /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.F Executing: ftn -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -Wall -Wno-unused-variable -Wno-unused-dummy-argument -O3 -ffast-math -funroll-loops -DTesting /scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers/conftest.F sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: program main #define dummy dummy #ifndef Testing fooey #endif end Popping language FC compilers: Fortran uses -D for defining macro ================================================================================ TEST checkFortranLinkingCxx from config.compilers(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/compilers.py:1016) TESTING: checkFortranLinkingCxx from config.compilers(config/BuildSystem/config/compilers.py:1016) Check that Fortran can be linked against C++ Pushing language Cxx sh: CC -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.cc Executing: CC -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.cc sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" extern "C" void d1chk_(void); void foo(void){d1chk_();} Popping language Cxx Pushing language Cxx sh: CC -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.cc Executing: CC -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.cc sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" extern "C" void d1chk_(void); void d1chk_(void){return;} Popping language Cxx Pushing language FC sh: ftn -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -Wall -Wno-unused-variable -Wno-unused-dummy-argument -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.F Executing: ftn -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -Wall -Wno-unused-variable -Wno-unused-dummy-argument -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.F sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: program main call d1chk() end Pushing language FC Popping language FC sh: ftn -o /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest -Wall -Wno-unused-variable -Wno-unused-dummy-argument -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.o /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/cxxobj.o /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/confc.o -ldl Executing: ftn -o /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest -Wall -Wno-unused-variable -Wno-unused-dummy-argument -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.o /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/cxxobj.o /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/confc.o -ldl sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded output: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Pushing language FC Popping language FC in ftn -o /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest -Wall -Wno-unused-variable -Wno-unused-dummy-argument -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.o /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/cxxobj.o /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/confc.o -ldl Source: program main call d1chk() end Popping language FC compilers: Fortran can link C++ functions ================================================================================ TEST checkFortran90 from config.compilers(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/compilers.py:1051) TESTING: checkFortran90 from config.compilers(config/BuildSystem/config/compilers.py:1051) Determine whether the Fortran compiler handles F90 Pushing language FC sh: ftn -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -Wall -Wno-unused-variable -Wno-unused-dummy-argument -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.F Executing: ftn -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -Wall -Wno-unused-variable -Wno-unused-dummy-argument -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.F sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: program main INTEGER, PARAMETER :: int = SELECTED_INT_KIND(8) INTEGER (KIND=int) :: ierr ierr = 1 end Pushing language FC Popping language FC sh: ftn -o /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest -Wall -Wno-unused-variable -Wno-unused-dummy-argument -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.o -ldl Executing: ftn -o /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest -Wall -Wno-unused-variable -Wno-unused-dummy-argument -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.o -ldl sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded output: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Pushing language FC Popping language FC in ftn -o /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest -Wall -Wno-unused-variable -Wno-unused-dummy-argument -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.o -ldl Source: program main INTEGER, PARAMETER :: int = SELECTED_INT_KIND(8) INTEGER (KIND=int) :: ierr ierr = 1 end Defined "USING_F90" to "1" Fortran compiler supports F90 Popping language FC ================================================================================ TEST checkFortran2003 from config.compilers(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/compilers.py:1064) TESTING: checkFortran2003 from config.compilers(config/BuildSystem/config/compilers.py:1064) Determine whether the Fortran compiler handles F2003 Pushing language FC sh: ftn -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -Wall -Wno-unused-variable -Wno-unused-dummy-argument -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.F Executing: ftn -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -Wall -Wno-unused-variable -Wno-unused-dummy-argument -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.F sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.F: In function 'main': /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.F:9:0: warning: 'carray.dim[0].lbound' may be used uninitialized in this function [-Wmaybe-uninitialized] CArray = (/(c_loc(list1(i)),i=1,5),c_loc(nullc)/) ^ /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.F:4:0: note: 'carray.dim[0].lbound' was declared here Type(C_Ptr),Dimension(:),Pointer :: CArray ^ /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.F:9:0: warning: 'carray.dim[0].stride' may be used uninitialized in this function [-Wmaybe-uninitialized] CArray = (/(c_loc(list1(i)),i=1,5),c_loc(nullc)/) ^ /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.F:4:0: note: 'carray.dim[0].stride' was declared here Type(C_Ptr),Dimension(:),Pointer :: CArray ^ /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.F:9:0: warning: 'carray.offset' may be used uninitialized in this function [-Wmaybe-uninitialized] CArray = (/(c_loc(list1(i)),i=1,5),c_loc(nullc)/) ^ /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.F:4:0: note: 'carray.offset' was declared here Type(C_Ptr),Dimension(:),Pointer :: CArray ^ } Source: program main use,intrinsic :: iso_c_binding Type(C_Ptr),Dimension(:),Pointer :: CArray character(kind=c_char),pointer :: nullc => null() character(kind=c_char,len=5),dimension(:),pointer::list1 allocate(list1(5)) CArray = (/(c_loc(list1(i)),i=1,5),c_loc(nullc)/) end Pushing language FC Popping language FC sh: ftn -o /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest -Wall -Wno-unused-variable -Wno-unused-dummy-argument -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.o -ldl Executing: ftn -o /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest -Wall -Wno-unused-variable -Wno-unused-dummy-argument -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.o -ldl sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded output: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Pushing language FC Popping language FC in ftn -o /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest -Wall -Wno-unused-variable -Wno-unused-dummy-argument -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.o -ldl Source: program main use,intrinsic :: iso_c_binding Type(C_Ptr),Dimension(:),Pointer :: CArray character(kind=c_char),pointer :: nullc => null() character(kind=c_char,len=5),dimension(:),pointer::list1 allocate(list1(5)) CArray = (/(c_loc(list1(i)),i=1,5),c_loc(nullc)/) end Defined "USING_F2003" to "1" Fortran compiler supports F2003 Popping language FC ================================================================================ TEST checkFortran90Array from config.compilers(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/compilers.py:1084) TESTING: checkFortran90Array from config.compilers(config/BuildSystem/config/compilers.py:1084) Check for F90 array interfaces sh: uname -s Executing: uname -s sh: Linux Pushing language C sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" #include #include void f90arraytest_(void* a1, void* a2,void* a3, void* i) { printf("arrays [%p %p %p]\n",a1,a2,a3); fflush(stdout); return; } void f90ptrtest_(void* a1, void* a2,void* a3, void* i, void* p1 ,void* p2, void* p3) { printf("arrays [%p %p %p]\n",a1,a2,a3); if ((p1 == p3) && (p1 != p2)) { printf("pointers match! [%p %p] [%p]\n",p1,p3,p2); fflush(stdout); } else { printf("pointers do not match! [%p %p] [%p]\n",p1,p3,p2); fflush(stdout); abort(); } return; } Popping language C Pushing language FC sh: ftn -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -Wall -Wno-unused-variable -Wno-unused-dummy-argument -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.F Executing: ftn -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -Wall -Wno-unused-variable -Wno-unused-dummy-argument -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.F sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: program main Interface Subroutine f90ptrtest(p1,p2,p3,i) integer, pointer :: p1(:,:) integer, pointer :: p2(:,:) integer, pointer :: p3(:,:) integer i End Subroutine End Interface integer, pointer :: ptr1(:,:),ptr2(:,:) integer, target :: array(6:8,9:21) integer in in = 25 ptr1 => array ptr2 => array call f90arraytest(ptr1,ptr2,ptr1,in) call f90ptrtest(ptr1,ptr2,ptr1,in) end Pushing language FC Popping language FC sh: ftn -o /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest -Wall -Wno-unused-variable -Wno-unused-dummy-argument -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.o /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/fooobj.o -ldl Executing: ftn -o /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest -Wall -Wno-unused-variable -Wno-unused-dummy-argument -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.o /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/fooobj.o -ldl sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded output: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Pushing language FC Popping language FC in ftn -o /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest -Wall -Wno-unused-variable -Wno-unused-dummy-argument -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.o /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/fooobj.o -ldl Source: program main Interface Subroutine f90ptrtest(p1,p2,p3,i) integer, pointer :: p1(:,:) integer, pointer :: p2(:,:) integer, pointer :: p3(:,:) integer i End Subroutine End Interface integer, pointer :: ptr1(:,:),ptr2(:,:) integer, target :: array(6:8,9:21) integer in in = 25 ptr1 => array ptr2 => array call f90arraytest(ptr1,ptr2,ptr1,in) call f90ptrtest(ptr1,ptr2,ptr1,in) end Executing: /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest sh: /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest Executing: /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest sh: arrays [0x7fffffff9b00 0x7fffffff9b00 0x7fffffff9b00] arrays [0x7fffffff9a60 0x7fffffff9ab0 0x7fffffff9a60] pointers do not match! [0xffffffff 0x19] [0x6df710] ERROR while running executable: Could not execute "/scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest": arrays [0x7fffffff9b00 0x7fffffff9b00 0x7fffffff9b00] arrays [0x7fffffff9a60 0x7fffffff9ab0 0x7fffffff9a60] pointers do not match! [0xffffffff 0x19] [0x6df710] Program received signal SIGABRT: Process abort signal. Backtrace for this error: #0 0x407F3D in _gfortran_backtrace at backtrace.c:258 #1 0x401040 in _gfortrani_backtrace_handler at compile_options.c:129 #2 0x420E5F in raise #3 0x420E1B in raise at pt-raise.c:41 #4 0x430100 in abort at abort.c:92 #5 0x4007CF in f90ptrtest_ #6 0x400703 in MAIN__ at conftest.F:0 Popping language FC compilers: F90 uses a single argument for array pointers ================================================================================ TEST checkFortranModuleInclude from config.compilers(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/compilers.py:1171) TESTING: checkFortranModuleInclude from config.compilers(config/BuildSystem/config/compilers.py:1171) Figures out what flag is used to specify the include path for Fortran modules Pushing language FC sh: ftn -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -Wall -Wno-unused-variable -Wno-unused-dummy-argument -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.F Executing: ftn -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -Wall -Wno-unused-variable -Wno-unused-dummy-argument -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.F sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: module configtest integer testint parameter (testint = 42) end module configtest Pushing language FC sh: ftn -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers/confdir -Wall -Wno-unused-variable -Wno-unused-dummy-argument -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.F Executing: ftn -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers/confdir -Wall -Wno-unused-variable -Wno-unused-dummy-argument -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.F sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: program main use configtest write(*,*) testint end Pushing language FC Popping language FC sh: ftn -o /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers/confdir -Wall -Wno-unused-variable -Wno-unused-dummy-argument -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.o /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/configtest.o -ldl Executing: ftn -o /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers/confdir -Wall -Wno-unused-variable -Wno-unused-dummy-argument -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.o /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/configtest.o -ldl sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded output: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Pushing language FC Popping language FC in ftn -o /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers/confdir -Wall -Wno-unused-variable -Wno-unused-dummy-argument -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.o /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/configtest.o -ldl Source: program main use configtest write(*,*) testint end compilers: Fortran module include flag -I found Popping language FC ================================================================================ TEST checkFortranModuleOutput from config.compilers(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/compilers.py:1237) TESTING: checkFortranModuleOutput from config.compilers(config/BuildSystem/config/compilers.py:1237) Figures out what flag is used to specify the include path for Fortran modules Pushing language FC sh: ftn -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -module /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/confdir -Wall -Wno-unused-variable -Wno-unused-dummy-argument -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.F Executing: ftn -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -module /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/confdir -Wall -Wno-unused-variable -Wno-unused-dummy-argument -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.F sh: Possible ERROR while running compiler: ret = 256 error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded gfortran: error: unrecognized command line option '-module' } Source: module configtest integer testint parameter (testint = 42) end module configtest compilers: Fortran module output flag -module compile failed sh: ftn -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -module:/scratch/scratchdirs/madams/petsc-i5209_/config.compilers/confdir -Wall -Wno-unused-variable -Wno-unused-dummy-argument -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.F Executing: ftn -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -module:/scratch/scratchdirs/madams/petsc-i5209_/config.compilers/confdir -Wall -Wno-unused-variable -Wno-unused-dummy-argument -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.F sh: Possible ERROR while running compiler: ret = 256 error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded gfortran: error: unrecognized command line option '-module:/scratch/scratchdirs/madams/petsc-i5209_/config.compilers/confdir' } Source: module configtest integer testint parameter (testint = 42) end module configtest compilers: Fortran module output flag -module: compile failed sh: ftn -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -fmod=/scratch/scratchdirs/madams/petsc-i5209_/config.compilers/confdir -Wall -Wno-unused-variable -Wno-unused-dummy-argument -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.F Executing: ftn -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -fmod=/scratch/scratchdirs/madams/petsc-i5209_/config.compilers/confdir -Wall -Wno-unused-variable -Wno-unused-dummy-argument -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.F sh: Possible ERROR while running compiler: ret = 256 error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded gfortran: error: unrecognized command line option '-fmod=/scratch/scratchdirs/madams/petsc-i5209_/config.compilers/confdir' } Source: module configtest integer testint parameter (testint = 42) end module configtest compilers: Fortran module output flag -fmod= compile failed sh: ftn -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -J/scratch/scratchdirs/madams/petsc-i5209_/config.compilers/confdir -Wall -Wno-unused-variable -Wno-unused-dummy-argument -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.F Executing: ftn -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -J/scratch/scratchdirs/madams/petsc-i5209_/config.compilers/confdir -Wall -Wno-unused-variable -Wno-unused-dummy-argument -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.compilers/conftest.F sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: module configtest integer testint parameter (testint = 42) end module configtest compilers: Fortran module output flag -J found Popping language FC ================================================================================ TEST setupFrameworkCompilers from config.compilers(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/compilers.py:1364) TESTING: setupFrameworkCompilers from config.compilers(config/BuildSystem/config/compilers.py:1364) ================================================================================ TEST configureFortranCPP from PETSc.utilities.fortranCPP(/global/u2/m/madams/petsc_maint/config/PETSc/utilities/fortranCPP.py:27) TESTING: configureFortranCPP from PETSc.utilities.fortranCPP(config/PETSc/utilities/fortranCPP.py:27) Handle case where Fortran cannot preprocess properly Defined make rule ".f.o .f90.o .f95.o" with dependencies "" and code ['${PETSC_MAKE_STOP_ON_ERROR}${FC} -c ${FFLAGS} ${FC_FLAGS} -o $@ $<'] Defined make rule ".f.a" with dependencies "" and code ['${PETSC_MAKE_STOP_ON_ERROR}${FC} -c ${FFLAGS} ${FC_FLAGS} $<', '-${AR} ${AR_FLAGS} ${LIBNAME} $*.o', '-${RM} $*.o'] Defined make rule ".F.o .F90.o .F95.o" with dependencies "" and code ['${PETSC_MAKE_STOP_ON_ERROR}${FC} -c ${FFLAGS} ${FC_FLAGS} ${FCPPFLAGS} -o $@ $<'] Defined make rule ".F.a" with dependencies "" and code ['${PETSC_MAKE_STOP_ON_ERROR}${FC} -c ${FFLAGS} ${FC_FLAGS} ${FCPPFLAGS} $<', '-${AR} ${AR_FLAGS} ${LIBNAME} $*.o', '-${RM} $*.o'] ================================================================================ TEST checkStdC from config.headers(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/headers.py:105) TESTING: checkStdC from config.headers(config/BuildSystem/config/headers.py:105) sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" #include #include #include #include int main() { ; return 0; } sh: gcc -E -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c Executing: gcc -E -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c sh: # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" # 1 "" # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/confdefs.h" 1 # 2 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conffix.h" 1 # 3 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 # 1 "/usr/include/string.h" 1 3 4 # 26 "/usr/include/string.h" 3 4 # 1 "/usr/include/features.h" 1 3 4 # 347 "/usr/include/features.h" 3 4 # 1 "/usr/include/sys/cdefs.h" 1 3 4 # 353 "/usr/include/sys/cdefs.h" 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 354 "/usr/include/sys/cdefs.h" 2 3 4 # 348 "/usr/include/features.h" 2 3 4 # 371 "/usr/include/features.h" 3 4 # 1 "/usr/include/gnu/stubs.h" 1 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 5 "/usr/include/gnu/stubs.h" 2 3 4 # 1 "/usr/include/gnu/stubs-64.h" 1 3 4 # 10 "/usr/include/gnu/stubs.h" 2 3 4 # 372 "/usr/include/features.h" 2 3 4 # 27 "/usr/include/string.h" 2 3 4 # 1 "/opt/gcc/4.8.1/snos/lib/gcc/x86_64-suse-linux/4.8.1/include/stddef.h" 1 3 4 # 212 "/opt/gcc/4.8.1/snos/lib/gcc/x86_64-suse-linux/4.8.1/include/stddef.h" 3 4 typedef long unsigned int size_t; # 34 "/usr/include/string.h" 2 3 4 extern void *memcpy (void *__restrict __dest, __const void *__restrict __src, size_t __n) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern void *memmove (void *__dest, __const void *__src, size_t __n) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern void *memccpy (void *__restrict __dest, __const void *__restrict __src, int __c, size_t __n) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern void *memset (void *__s, int __c, size_t __n) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int memcmp (__const void *__s1, __const void *__s2, size_t __n) __attribute__ ((__nothrow__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1, 2))); # 94 "/usr/include/string.h" 3 4 extern void *memchr (__const void *__s, int __c, size_t __n) __attribute__ ((__nothrow__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1))); # 125 "/usr/include/string.h" 3 4 extern char *strcpy (char *__restrict __dest, __const char *__restrict __src) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern char *strncpy (char *__restrict __dest, __const char *__restrict __src, size_t __n) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern char *strcat (char *__restrict __dest, __const char *__restrict __src) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern char *strncat (char *__restrict __dest, __const char *__restrict __src, size_t __n) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int strcmp (__const char *__s1, __const char *__s2) __attribute__ ((__nothrow__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1, 2))); extern int strncmp (__const char *__s1, __const char *__s2, size_t __n) __attribute__ ((__nothrow__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1, 2))); extern int strcoll (__const char *__s1, __const char *__s2) __attribute__ ((__nothrow__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1, 2))); extern size_t strxfrm (char *__restrict __dest, __const char *__restrict __src, size_t __n) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (2))); # 1 "/usr/include/xlocale.h" 1 3 4 # 28 "/usr/include/xlocale.h" 3 4 typedef struct __locale_struct { struct locale_data *__locales[13]; const unsigned short int *__ctype_b; const int *__ctype_tolower; const int *__ctype_toupper; const char *__names[13]; } *__locale_t; typedef __locale_t locale_t; # 162 "/usr/include/string.h" 2 3 4 extern int strcoll_l (__const char *__s1, __const char *__s2, __locale_t __l) __attribute__ ((__nothrow__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1, 2, 3))); extern size_t strxfrm_l (char *__dest, __const char *__src, size_t __n, __locale_t __l) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (2, 4))); extern char *strdup (__const char *__s) __attribute__ ((__nothrow__)) __attribute__ ((__malloc__)) __attribute__ ((__nonnull__ (1))); extern char *strndup (__const char *__string, size_t __n) __attribute__ ((__nothrow__)) __attribute__ ((__malloc__)) __attribute__ ((__nonnull__ (1))); # 208 "/usr/include/string.h" 3 4 # 233 "/usr/include/string.h" 3 4 extern char *strchr (__const char *__s, int __c) __attribute__ ((__nothrow__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1))); # 260 "/usr/include/string.h" 3 4 extern char *strrchr (__const char *__s, int __c) __attribute__ ((__nothrow__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1))); # 279 "/usr/include/string.h" 3 4 extern size_t strcspn (__const char *__s, __const char *__reject) __attribute__ ((__nothrow__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1, 2))); extern size_t strspn (__const char *__s, __const char *__accept) __attribute__ ((__nothrow__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1, 2))); # 312 "/usr/include/string.h" 3 4 extern char *strpbrk (__const char *__s, __const char *__accept) __attribute__ ((__nothrow__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1, 2))); # 340 "/usr/include/string.h" 3 4 extern char *strstr (__const char *__haystack, __const char *__needle) __attribute__ ((__nothrow__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1, 2))); extern char *strtok (char *__restrict __s, __const char *__restrict __delim) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (2))); extern char *__strtok_r (char *__restrict __s, __const char *__restrict __delim, char **__restrict __save_ptr) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (2, 3))); extern char *strtok_r (char *__restrict __s, __const char *__restrict __delim, char **__restrict __save_ptr) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (2, 3))); # 395 "/usr/include/string.h" 3 4 extern size_t strlen (__const char *__s) __attribute__ ((__nothrow__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1))); extern size_t strnlen (__const char *__string, size_t __maxlen) __attribute__ ((__nothrow__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1))); extern char *strerror (int __errnum) __attribute__ ((__nothrow__)); # 425 "/usr/include/string.h" 3 4 extern int strerror_r (int __errnum, char *__buf, size_t __buflen) __asm__ ("" "__xpg_strerror_r") __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (2))); # 443 "/usr/include/string.h" 3 4 extern char *strerror_l (int __errnum, __locale_t __l) __attribute__ ((__nothrow__)); extern void __bzero (void *__s, size_t __n) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern void bcopy (__const void *__src, void *__dest, size_t __n) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern void bzero (void *__s, size_t __n) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int bcmp (__const void *__s1, __const void *__s2, size_t __n) __attribute__ ((__nothrow__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1, 2))); # 487 "/usr/include/string.h" 3 4 extern char *index (__const char *__s, int __c) __attribute__ ((__nothrow__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1))); # 515 "/usr/include/string.h" 3 4 extern char *rindex (__const char *__s, int __c) __attribute__ ((__nothrow__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1))); extern int ffs (int __i) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); # 534 "/usr/include/string.h" 3 4 extern int strcasecmp (__const char *__s1, __const char *__s2) __attribute__ ((__nothrow__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1, 2))); extern int strncasecmp (__const char *__s1, __const char *__s2, size_t __n) __attribute__ ((__nothrow__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1, 2))); # 557 "/usr/include/string.h" 3 4 extern char *strsep (char **__restrict __stringp, __const char *__restrict __delim) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern char *strsignal (int __sig) __attribute__ ((__nothrow__)); extern char *__stpcpy (char *__restrict __dest, __const char *__restrict __src) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern char *stpcpy (char *__restrict __dest, __const char *__restrict __src) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern char *__stpncpy (char *__restrict __dest, __const char *__restrict __src, size_t __n) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern char *stpncpy (char *__restrict __dest, __const char *__restrict __src, size_t __n) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); # 644 "/usr/include/string.h" 3 4 # 3 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 sh: gcc -E -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c Executing: gcc -E -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c sh: # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" # 1 "" # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/confdefs.h" 1 # 2 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conffix.h" 1 # 3 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 # 1 "/usr/include/stdlib.h" 1 3 4 # 25 "/usr/include/stdlib.h" 3 4 # 1 "/usr/include/features.h" 1 3 4 # 347 "/usr/include/features.h" 3 4 # 1 "/usr/include/sys/cdefs.h" 1 3 4 # 353 "/usr/include/sys/cdefs.h" 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 354 "/usr/include/sys/cdefs.h" 2 3 4 # 348 "/usr/include/features.h" 2 3 4 # 371 "/usr/include/features.h" 3 4 # 1 "/usr/include/gnu/stubs.h" 1 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 5 "/usr/include/gnu/stubs.h" 2 3 4 # 1 "/usr/include/gnu/stubs-64.h" 1 3 4 # 10 "/usr/include/gnu/stubs.h" 2 3 4 # 372 "/usr/include/features.h" 2 3 4 # 26 "/usr/include/stdlib.h" 2 3 4 # 1 "/opt/gcc/4.8.1/snos/lib/gcc/x86_64-suse-linux/4.8.1/include/stddef.h" 1 3 4 # 212 "/opt/gcc/4.8.1/snos/lib/gcc/x86_64-suse-linux/4.8.1/include/stddef.h" 3 4 typedef long unsigned int size_t; # 324 "/opt/gcc/4.8.1/snos/lib/gcc/x86_64-suse-linux/4.8.1/include/stddef.h" 3 4 typedef int wchar_t; # 34 "/usr/include/stdlib.h" 2 3 4 # 96 "/usr/include/stdlib.h" 3 4 typedef struct { int quot; int rem; } div_t; typedef struct { long int quot; long int rem; } ldiv_t; __extension__ typedef struct { long long int quot; long long int rem; } lldiv_t; # 140 "/usr/include/stdlib.h" 3 4 extern size_t __ctype_get_mb_cur_max (void) __attribute__ ((__nothrow__)) ; extern double atof (__const char *__nptr) __attribute__ ((__nothrow__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1))) ; extern int atoi (__const char *__nptr) __attribute__ ((__nothrow__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1))) ; extern long int atol (__const char *__nptr) __attribute__ ((__nothrow__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1))) ; __extension__ extern long long int atoll (__const char *__nptr) __attribute__ ((__nothrow__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1))) ; extern double strtod (__const char *__restrict __nptr, char **__restrict __endptr) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) ; extern float strtof (__const char *__restrict __nptr, char **__restrict __endptr) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) ; extern long double strtold (__const char *__restrict __nptr, char **__restrict __endptr) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) ; extern long int strtol (__const char *__restrict __nptr, char **__restrict __endptr, int __base) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) ; extern unsigned long int strtoul (__const char *__restrict __nptr, char **__restrict __endptr, int __base) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) ; __extension__ extern long long int strtoq (__const char *__restrict __nptr, char **__restrict __endptr, int __base) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) ; __extension__ extern unsigned long long int strtouq (__const char *__restrict __nptr, char **__restrict __endptr, int __base) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) ; __extension__ extern long long int strtoll (__const char *__restrict __nptr, char **__restrict __endptr, int __base) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) ; __extension__ extern unsigned long long int strtoull (__const char *__restrict __nptr, char **__restrict __endptr, int __base) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) ; # 311 "/usr/include/stdlib.h" 3 4 extern char *l64a (long int __n) __attribute__ ((__nothrow__)) ; extern long int a64l (__const char *__s) __attribute__ ((__nothrow__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1))) ; # 1 "/usr/include/sys/types.h" 1 3 4 # 29 "/usr/include/sys/types.h" 3 4 # 1 "/usr/include/bits/types.h" 1 3 4 # 28 "/usr/include/bits/types.h" 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 29 "/usr/include/bits/types.h" 2 3 4 typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; # 131 "/usr/include/bits/types.h" 3 4 # 1 "/usr/include/bits/typesizes.h" 1 3 4 # 132 "/usr/include/bits/types.h" 2 3 4 typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned long int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef long int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; # 32 "/usr/include/sys/types.h" 2 3 4 typedef __u_char u_char; typedef __u_short u_short; typedef __u_int u_int; typedef __u_long u_long; typedef __quad_t quad_t; typedef __u_quad_t u_quad_t; typedef __fsid_t fsid_t; typedef __loff_t loff_t; typedef __ino_t ino_t; # 62 "/usr/include/sys/types.h" 3 4 typedef __dev_t dev_t; typedef __gid_t gid_t; typedef __mode_t mode_t; typedef __nlink_t nlink_t; typedef __uid_t uid_t; typedef __off_t off_t; # 100 "/usr/include/sys/types.h" 3 4 typedef __pid_t pid_t; typedef __id_t id_t; typedef __ssize_t ssize_t; typedef __daddr_t daddr_t; typedef __caddr_t caddr_t; typedef __key_t key_t; # 133 "/usr/include/sys/types.h" 3 4 # 1 "/usr/include/time.h" 1 3 4 # 74 "/usr/include/time.h" 3 4 typedef __time_t time_t; # 92 "/usr/include/time.h" 3 4 typedef __clockid_t clockid_t; # 104 "/usr/include/time.h" 3 4 typedef __timer_t timer_t; # 134 "/usr/include/sys/types.h" 2 3 4 # 147 "/usr/include/sys/types.h" 3 4 # 1 "/opt/gcc/4.8.1/snos/lib/gcc/x86_64-suse-linux/4.8.1/include/stddef.h" 1 3 4 # 148 "/usr/include/sys/types.h" 2 3 4 typedef unsigned long int ulong; typedef unsigned short int ushort; typedef unsigned int uint; # 195 "/usr/include/sys/types.h" 3 4 typedef int int8_t __attribute__ ((__mode__ (__QI__))); typedef int int16_t __attribute__ ((__mode__ (__HI__))); typedef int int32_t __attribute__ ((__mode__ (__SI__))); typedef int int64_t __attribute__ ((__mode__ (__DI__))); typedef unsigned int u_int8_t __attribute__ ((__mode__ (__QI__))); typedef unsigned int u_int16_t __attribute__ ((__mode__ (__HI__))); typedef unsigned int u_int32_t __attribute__ ((__mode__ (__SI__))); typedef unsigned int u_int64_t __attribute__ ((__mode__ (__DI__))); typedef int register_t __attribute__ ((__mode__ (__word__))); # 217 "/usr/include/sys/types.h" 3 4 # 1 "/usr/include/endian.h" 1 3 4 # 37 "/usr/include/endian.h" 3 4 # 1 "/usr/include/bits/endian.h" 1 3 4 # 38 "/usr/include/endian.h" 2 3 4 # 61 "/usr/include/endian.h" 3 4 # 1 "/usr/include/bits/byteswap.h" 1 3 4 # 28 "/usr/include/bits/byteswap.h" 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 29 "/usr/include/bits/byteswap.h" 2 3 4 # 62 "/usr/include/endian.h" 2 3 4 # 218 "/usr/include/sys/types.h" 2 3 4 # 1 "/usr/include/sys/select.h" 1 3 4 # 31 "/usr/include/sys/select.h" 3 4 # 1 "/usr/include/bits/select.h" 1 3 4 # 23 "/usr/include/bits/select.h" 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 24 "/usr/include/bits/select.h" 2 3 4 # 32 "/usr/include/sys/select.h" 2 3 4 # 1 "/usr/include/bits/sigset.h" 1 3 4 # 24 "/usr/include/bits/sigset.h" 3 4 typedef int __sig_atomic_t; typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; # 35 "/usr/include/sys/select.h" 2 3 4 typedef __sigset_t sigset_t; # 1 "/usr/include/time.h" 1 3 4 # 120 "/usr/include/time.h" 3 4 struct timespec { __time_t tv_sec; long int tv_nsec; }; # 45 "/usr/include/sys/select.h" 2 3 4 # 1 "/usr/include/bits/time.h" 1 3 4 # 69 "/usr/include/bits/time.h" 3 4 struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; # 47 "/usr/include/sys/select.h" 2 3 4 typedef __suseconds_t suseconds_t; typedef long int __fd_mask; # 67 "/usr/include/sys/select.h" 3 4 typedef struct { __fd_mask __fds_bits[1024 / (8 * (int) sizeof (__fd_mask))]; } fd_set; typedef __fd_mask fd_mask; # 99 "/usr/include/sys/select.h" 3 4 # 109 "/usr/include/sys/select.h" 3 4 extern int select (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, struct timeval *__restrict __timeout); # 121 "/usr/include/sys/select.h" 3 4 extern int pselect (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, const struct timespec *__restrict __timeout, const __sigset_t *__restrict __sigmask); # 221 "/usr/include/sys/types.h" 2 3 4 # 1 "/usr/include/sys/sysmacros.h" 1 3 4 # 30 "/usr/include/sys/sysmacros.h" 3 4 __extension__ extern unsigned int gnu_dev_major (unsigned long long int __dev) __attribute__ ((__nothrow__)); __extension__ extern unsigned int gnu_dev_minor (unsigned long long int __dev) __attribute__ ((__nothrow__)); __extension__ extern unsigned long long int gnu_dev_makedev (unsigned int __major, unsigned int __minor) __attribute__ ((__nothrow__)); # 224 "/usr/include/sys/types.h" 2 3 4 # 235 "/usr/include/sys/types.h" 3 4 typedef __blkcnt_t blkcnt_t; typedef __fsblkcnt_t fsblkcnt_t; typedef __fsfilcnt_t fsfilcnt_t; # 270 "/usr/include/sys/types.h" 3 4 # 1 "/usr/include/bits/pthreadtypes.h" 1 3 4 # 23 "/usr/include/bits/pthreadtypes.h" 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 24 "/usr/include/bits/pthreadtypes.h" 2 3 4 # 50 "/usr/include/bits/pthreadtypes.h" 3 4 typedef unsigned long int pthread_t; typedef union { char __size[56]; long int __align; } pthread_attr_t; typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; # 76 "/usr/include/bits/pthreadtypes.h" 3 4 typedef union { struct __pthread_mutex_s { int __lock; unsigned int __count; int __owner; unsigned int __nusers; int __kind; int __spins; __pthread_list_t __list; # 101 "/usr/include/bits/pthreadtypes.h" 3 4 } __data; char __size[40]; long int __align; } pthread_mutex_t; typedef union { char __size[4]; int __align; } pthread_mutexattr_t; typedef union { struct { int __lock; unsigned int __futex; __extension__ unsigned long long int __total_seq; __extension__ unsigned long long int __wakeup_seq; __extension__ unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; __extension__ long long int __align; } pthread_cond_t; typedef union { char __size[4]; int __align; } pthread_condattr_t; typedef unsigned int pthread_key_t; typedef int pthread_once_t; typedef union { struct { int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; unsigned int __flags; } __data; # 187 "/usr/include/bits/pthreadtypes.h" 3 4 char __size[56]; long int __align; } pthread_rwlock_t; typedef union { char __size[8]; long int __align; } pthread_rwlockattr_t; typedef volatile int pthread_spinlock_t; typedef union { char __size[32]; long int __align; } pthread_barrier_t; typedef union { char __size[4]; int __align; } pthread_barrierattr_t; # 271 "/usr/include/sys/types.h" 2 3 4 # 321 "/usr/include/stdlib.h" 2 3 4 extern long int random (void) __attribute__ ((__nothrow__)); extern void srandom (unsigned int __seed) __attribute__ ((__nothrow__)); extern char *initstate (unsigned int __seed, char *__statebuf, size_t __statelen) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (2))); extern char *setstate (char *__statebuf) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); struct random_data { int32_t *fptr; int32_t *rptr; int32_t *state; int rand_type; int rand_deg; int rand_sep; int32_t *end_ptr; }; extern int random_r (struct random_data *__restrict __buf, int32_t *__restrict __result) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int srandom_r (unsigned int __seed, struct random_data *__buf) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (2))); extern int initstate_r (unsigned int __seed, char *__restrict __statebuf, size_t __statelen, struct random_data *__restrict __buf) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (2, 4))); extern int setstate_r (char *__restrict __statebuf, struct random_data *__restrict __buf) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int rand (void) __attribute__ ((__nothrow__)); extern void srand (unsigned int __seed) __attribute__ ((__nothrow__)); extern int rand_r (unsigned int *__seed) __attribute__ ((__nothrow__)); extern double drand48 (void) __attribute__ ((__nothrow__)); extern double erand48 (unsigned short int __xsubi[3]) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern long int lrand48 (void) __attribute__ ((__nothrow__)); extern long int nrand48 (unsigned short int __xsubi[3]) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern long int mrand48 (void) __attribute__ ((__nothrow__)); extern long int jrand48 (unsigned short int __xsubi[3]) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern void srand48 (long int __seedval) __attribute__ ((__nothrow__)); extern unsigned short int *seed48 (unsigned short int __seed16v[3]) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern void lcong48 (unsigned short int __param[7]) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); struct drand48_data { unsigned short int __x[3]; unsigned short int __old_x[3]; unsigned short int __c; unsigned short int __init; unsigned long long int __a; }; extern int drand48_r (struct drand48_data *__restrict __buffer, double *__restrict __result) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int erand48_r (unsigned short int __xsubi[3], struct drand48_data *__restrict __buffer, double *__restrict __result) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int lrand48_r (struct drand48_data *__restrict __buffer, long int *__restrict __result) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int nrand48_r (unsigned short int __xsubi[3], struct drand48_data *__restrict __buffer, long int *__restrict __result) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int mrand48_r (struct drand48_data *__restrict __buffer, long int *__restrict __result) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int jrand48_r (unsigned short int __xsubi[3], struct drand48_data *__restrict __buffer, long int *__restrict __result) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int srand48_r (long int __seedval, struct drand48_data *__buffer) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (2))); extern int seed48_r (unsigned short int __seed16v[3], struct drand48_data *__buffer) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int lcong48_r (unsigned short int __param[7], struct drand48_data *__buffer) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern void *malloc (size_t __size) __attribute__ ((__nothrow__)) __attribute__ ((__malloc__)) ; extern void *calloc (size_t __nmemb, size_t __size) __attribute__ ((__nothrow__)) __attribute__ ((__malloc__)) ; extern void *realloc (void *__ptr, size_t __size) __attribute__ ((__nothrow__)) __attribute__ ((__warn_unused_result__)); extern void free (void *__ptr) __attribute__ ((__nothrow__)); extern void cfree (void *__ptr) __attribute__ ((__nothrow__)); # 1 "/usr/include/alloca.h" 1 3 4 # 25 "/usr/include/alloca.h" 3 4 # 1 "/opt/gcc/4.8.1/snos/lib/gcc/x86_64-suse-linux/4.8.1/include/stddef.h" 1 3 4 # 26 "/usr/include/alloca.h" 2 3 4 extern void *alloca (size_t __size) __attribute__ ((__nothrow__)); # 498 "/usr/include/stdlib.h" 2 3 4 extern void *valloc (size_t __size) __attribute__ ((__nothrow__)) __attribute__ ((__malloc__)) ; extern int posix_memalign (void **__memptr, size_t __alignment, size_t __size) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) ; extern void abort (void) __attribute__ ((__nothrow__)) __attribute__ ((__noreturn__)); extern int atexit (void (*__func) (void)) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); # 530 "/usr/include/stdlib.h" 3 4 extern int on_exit (void (*__func) (int __status, void *__arg), void *__arg) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern void exit (int __status) __attribute__ ((__nothrow__)) __attribute__ ((__noreturn__)); # 553 "/usr/include/stdlib.h" 3 4 extern void _Exit (int __status) __attribute__ ((__nothrow__)) __attribute__ ((__noreturn__)); extern char *getenv (__const char *__name) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) ; extern char *__secure_getenv (__const char *__name) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) ; extern int putenv (char *__string) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int setenv (__const char *__name, __const char *__value, int __replace) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (2))); extern int unsetenv (__const char *__name) __attribute__ ((__nothrow__)); extern int clearenv (void) __attribute__ ((__nothrow__)); # 604 "/usr/include/stdlib.h" 3 4 extern char *mktemp (char *__template) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) ; # 615 "/usr/include/stdlib.h" 3 4 extern int mkstemp (char *__template) __attribute__ ((__nonnull__ (1))) ; # 637 "/usr/include/stdlib.h" 3 4 extern int mkstemps (char *__template, int __suffixlen) __attribute__ ((__nonnull__ (1))) ; # 658 "/usr/include/stdlib.h" 3 4 extern char *mkdtemp (char *__template) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) ; # 707 "/usr/include/stdlib.h" 3 4 extern int system (__const char *__command) ; # 729 "/usr/include/stdlib.h" 3 4 extern char *realpath (__const char *__restrict __name, char *__restrict __resolved) __attribute__ ((__nothrow__)) ; typedef int (*__compar_fn_t) (__const void *, __const void *); # 747 "/usr/include/stdlib.h" 3 4 extern void *bsearch (__const void *__key, __const void *__base, size_t __nmemb, size_t __size, __compar_fn_t __compar) __attribute__ ((__nonnull__ (1, 2, 5))) ; extern void qsort (void *__base, size_t __nmemb, size_t __size, __compar_fn_t __compar) __attribute__ ((__nonnull__ (1, 4))); # 766 "/usr/include/stdlib.h" 3 4 extern int abs (int __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)) ; extern long int labs (long int __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)) ; __extension__ extern long long int llabs (long long int __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)) ; extern div_t div (int __numer, int __denom) __attribute__ ((__nothrow__)) __attribute__ ((__const__)) ; extern ldiv_t ldiv (long int __numer, long int __denom) __attribute__ ((__nothrow__)) __attribute__ ((__const__)) ; __extension__ extern lldiv_t lldiv (long long int __numer, long long int __denom) __attribute__ ((__nothrow__)) __attribute__ ((__const__)) ; # 802 "/usr/include/stdlib.h" 3 4 extern char *ecvt (double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (3, 4))) ; extern char *fcvt (double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (3, 4))) ; extern char *gcvt (double __value, int __ndigit, char *__buf) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (3))) ; extern char *qecvt (long double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (3, 4))) ; extern char *qfcvt (long double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (3, 4))) ; extern char *qgcvt (long double __value, int __ndigit, char *__buf) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (3))) ; extern int ecvt_r (double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign, char *__restrict __buf, size_t __len) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (3, 4, 5))); extern int fcvt_r (double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign, char *__restrict __buf, size_t __len) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (3, 4, 5))); extern int qecvt_r (long double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign, char *__restrict __buf, size_t __len) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (3, 4, 5))); extern int qfcvt_r (long double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign, char *__restrict __buf, size_t __len) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (3, 4, 5))); extern int mblen (__const char *__s, size_t __n) __attribute__ ((__nothrow__)) ; extern int mbtowc (wchar_t *__restrict __pwc, __const char *__restrict __s, size_t __n) __attribute__ ((__nothrow__)) ; extern int wctomb (char *__s, wchar_t __wchar) __attribute__ ((__nothrow__)) ; extern size_t mbstowcs (wchar_t *__restrict __pwcs, __const char *__restrict __s, size_t __n) __attribute__ ((__nothrow__)); extern size_t wcstombs (char *__restrict __s, __const wchar_t *__restrict __pwcs, size_t __n) __attribute__ ((__nothrow__)); extern int rpmatch (__const char *__response) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) ; # 907 "/usr/include/stdlib.h" 3 4 extern int posix_openpt (int __oflag) ; # 942 "/usr/include/stdlib.h" 3 4 extern int getloadavg (double __loadavg[], int __nelem) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); # 958 "/usr/include/stdlib.h" 3 4 # 3 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" #include #include #define ISLOWER(c) ('a' <= (c) && (c) <= 'z') #define TOUPPER(c) (ISLOWER(c) ? 'A' + ((c) - 'a') : (c)) #define XOR(e, f) (((e) && !(f)) || (!(e) && (f))) int main() { int i; for(i = 0; i < 256; i++) if (XOR(islower(i), ISLOWER(i)) || toupper(i) != TOUPPER(i)) exit(2); exit(0); ; return 0; } Pushing language C Popping language C sh: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.o -ldl Executing: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.o -ldl sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded output: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Pushing language C Popping language C in cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.o -ldl Source: #include "confdefs.h" #include "conffix.h" #include #include #define ISLOWER(c) ('a' <= (c) && (c) <= 'z') #define TOUPPER(c) (ISLOWER(c) ? 'A' + ((c) - 'a') : (c)) #define XOR(e, f) (((e) && !(f)) || (!(e) && (f))) int main() { int i; for(i = 0; i < 256; i++) if (XOR(islower(i), ISLOWER(i)) || toupper(i) != TOUPPER(i)) exit(2); exit(0); ; return 0; } Executing: /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest sh: /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest Executing: /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest sh: Defined "STDC_HEADERS" to "1" ================================================================================ TEST checkStat from config.headers(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/headers.py:138) TESTING: checkStat from config.headers(config/BuildSystem/config/headers.py:138) Checks whether stat file-mode macros are broken, and defines STAT_MACROS_BROKEN if they are sh: gcc -E -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c Executing: gcc -E -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c sh: # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" # 1 "" # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/confdefs.h" 1 # 2 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conffix.h" 1 # 3 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 # 1 "/usr/include/sys/types.h" 1 3 4 # 27 "/usr/include/sys/types.h" 3 4 # 1 "/usr/include/features.h" 1 3 4 # 347 "/usr/include/features.h" 3 4 # 1 "/usr/include/sys/cdefs.h" 1 3 4 # 353 "/usr/include/sys/cdefs.h" 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 354 "/usr/include/sys/cdefs.h" 2 3 4 # 348 "/usr/include/features.h" 2 3 4 # 371 "/usr/include/features.h" 3 4 # 1 "/usr/include/gnu/stubs.h" 1 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 5 "/usr/include/gnu/stubs.h" 2 3 4 # 1 "/usr/include/gnu/stubs-64.h" 1 3 4 # 10 "/usr/include/gnu/stubs.h" 2 3 4 # 372 "/usr/include/features.h" 2 3 4 # 28 "/usr/include/sys/types.h" 2 3 4 # 1 "/usr/include/bits/types.h" 1 3 4 # 28 "/usr/include/bits/types.h" 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 29 "/usr/include/bits/types.h" 2 3 4 typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; # 131 "/usr/include/bits/types.h" 3 4 # 1 "/usr/include/bits/typesizes.h" 1 3 4 # 132 "/usr/include/bits/types.h" 2 3 4 typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned long int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef long int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; # 32 "/usr/include/sys/types.h" 2 3 4 typedef __u_char u_char; typedef __u_short u_short; typedef __u_int u_int; typedef __u_long u_long; typedef __quad_t quad_t; typedef __u_quad_t u_quad_t; typedef __fsid_t fsid_t; typedef __loff_t loff_t; typedef __ino_t ino_t; # 62 "/usr/include/sys/types.h" 3 4 typedef __dev_t dev_t; typedef __gid_t gid_t; typedef __mode_t mode_t; typedef __nlink_t nlink_t; typedef __uid_t uid_t; typedef __off_t off_t; # 100 "/usr/include/sys/types.h" 3 4 typedef __pid_t pid_t; typedef __id_t id_t; typedef __ssize_t ssize_t; typedef __daddr_t daddr_t; typedef __caddr_t caddr_t; typedef __key_t key_t; # 133 "/usr/include/sys/types.h" 3 4 # 1 "/usr/include/time.h" 1 3 4 # 74 "/usr/include/time.h" 3 4 typedef __time_t time_t; # 92 "/usr/include/time.h" 3 4 typedef __clockid_t clockid_t; # 104 "/usr/include/time.h" 3 4 typedef __timer_t timer_t; # 134 "/usr/include/sys/types.h" 2 3 4 # 147 "/usr/include/sys/types.h" 3 4 # 1 "/opt/gcc/4.8.1/snos/lib/gcc/x86_64-suse-linux/4.8.1/include/stddef.h" 1 3 4 # 212 "/opt/gcc/4.8.1/snos/lib/gcc/x86_64-suse-linux/4.8.1/include/stddef.h" 3 4 typedef long unsigned int size_t; # 148 "/usr/include/sys/types.h" 2 3 4 typedef unsigned long int ulong; typedef unsigned short int ushort; typedef unsigned int uint; # 195 "/usr/include/sys/types.h" 3 4 typedef int int8_t __attribute__ ((__mode__ (__QI__))); typedef int int16_t __attribute__ ((__mode__ (__HI__))); typedef int int32_t __attribute__ ((__mode__ (__SI__))); typedef int int64_t __attribute__ ((__mode__ (__DI__))); typedef unsigned int u_int8_t __attribute__ ((__mode__ (__QI__))); typedef unsigned int u_int16_t __attribute__ ((__mode__ (__HI__))); typedef unsigned int u_int32_t __attribute__ ((__mode__ (__SI__))); typedef unsigned int u_int64_t __attribute__ ((__mode__ (__DI__))); typedef int register_t __attribute__ ((__mode__ (__word__))); # 217 "/usr/include/sys/types.h" 3 4 # 1 "/usr/include/endian.h" 1 3 4 # 37 "/usr/include/endian.h" 3 4 # 1 "/usr/include/bits/endian.h" 1 3 4 # 38 "/usr/include/endian.h" 2 3 4 # 61 "/usr/include/endian.h" 3 4 # 1 "/usr/include/bits/byteswap.h" 1 3 4 # 28 "/usr/include/bits/byteswap.h" 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 29 "/usr/include/bits/byteswap.h" 2 3 4 # 62 "/usr/include/endian.h" 2 3 4 # 218 "/usr/include/sys/types.h" 2 3 4 # 1 "/usr/include/sys/select.h" 1 3 4 # 31 "/usr/include/sys/select.h" 3 4 # 1 "/usr/include/bits/select.h" 1 3 4 # 23 "/usr/include/bits/select.h" 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 24 "/usr/include/bits/select.h" 2 3 4 # 32 "/usr/include/sys/select.h" 2 3 4 # 1 "/usr/include/bits/sigset.h" 1 3 4 # 24 "/usr/include/bits/sigset.h" 3 4 typedef int __sig_atomic_t; typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; # 35 "/usr/include/sys/select.h" 2 3 4 typedef __sigset_t sigset_t; # 1 "/usr/include/time.h" 1 3 4 # 120 "/usr/include/time.h" 3 4 struct timespec { __time_t tv_sec; long int tv_nsec; }; # 45 "/usr/include/sys/select.h" 2 3 4 # 1 "/usr/include/bits/time.h" 1 3 4 # 69 "/usr/include/bits/time.h" 3 4 struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; # 47 "/usr/include/sys/select.h" 2 3 4 typedef __suseconds_t suseconds_t; typedef long int __fd_mask; # 67 "/usr/include/sys/select.h" 3 4 typedef struct { __fd_mask __fds_bits[1024 / (8 * (int) sizeof (__fd_mask))]; } fd_set; typedef __fd_mask fd_mask; # 99 "/usr/include/sys/select.h" 3 4 # 109 "/usr/include/sys/select.h" 3 4 extern int select (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, struct timeval *__restrict __timeout); # 121 "/usr/include/sys/select.h" 3 4 extern int pselect (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, const struct timespec *__restrict __timeout, const __sigset_t *__restrict __sigmask); # 221 "/usr/include/sys/types.h" 2 3 4 # 1 "/usr/include/sys/sysmacros.h" 1 3 4 # 30 "/usr/include/sys/sysmacros.h" 3 4 __extension__ extern unsigned int gnu_dev_major (unsigned long long int __dev) __attribute__ ((__nothrow__)); __extension__ extern unsigned int gnu_dev_minor (unsigned long long int __dev) __attribute__ ((__nothrow__)); __extension__ extern unsigned long long int gnu_dev_makedev (unsigned int __major, unsigned int __minor) __attribute__ ((__nothrow__)); # 224 "/usr/include/sys/types.h" 2 3 4 # 235 "/usr/include/sys/types.h" 3 4 typedef __blkcnt_t blkcnt_t; typedef __fsblkcnt_t fsblkcnt_t; typedef __fsfilcnt_t fsfilcnt_t; # 270 "/usr/include/sys/types.h" 3 4 # 1 "/usr/include/bits/pthreadtypes.h" 1 3 4 # 23 "/usr/include/bits/pthreadtypes.h" 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 24 "/usr/include/bits/pthreadtypes.h" 2 3 4 # 50 "/usr/include/bits/pthreadtypes.h" 3 4 typedef unsigned long int pthread_t; typedef union { char __size[56]; long int __align; } pthread_attr_t; typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; # 76 "/usr/include/bits/pthreadtypes.h" 3 4 typedef union { struct __pthread_mutex_s { int __lock; unsigned int __count; int __owner; unsigned int __nusers; int __kind; int __spins; __pthread_list_t __list; # 101 "/usr/include/bits/pthreadtypes.h" 3 4 } __data; char __size[40]; long int __align; } pthread_mutex_t; typedef union { char __size[4]; int __align; } pthread_mutexattr_t; typedef union { struct { int __lock; unsigned int __futex; __extension__ unsigned long long int __total_seq; __extension__ unsigned long long int __wakeup_seq; __extension__ unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; __extension__ long long int __align; } pthread_cond_t; typedef union { char __size[4]; int __align; } pthread_condattr_t; typedef unsigned int pthread_key_t; typedef int pthread_once_t; typedef union { struct { int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; unsigned int __flags; } __data; # 187 "/usr/include/bits/pthreadtypes.h" 3 4 char __size[56]; long int __align; } pthread_rwlock_t; typedef union { char __size[8]; long int __align; } pthread_rwlockattr_t; typedef volatile int pthread_spinlock_t; typedef union { char __size[32]; long int __align; } pthread_barrier_t; typedef union { char __size[4]; int __align; } pthread_barrierattr_t; # 271 "/usr/include/sys/types.h" 2 3 4 # 5 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 # 1 "/usr/include/sys/stat.h" 1 3 4 # 39 "/usr/include/sys/stat.h" 3 4 # 1 "/usr/include/time.h" 1 3 4 # 40 "/usr/include/sys/stat.h" 2 3 4 # 105 "/usr/include/sys/stat.h" 3 4 # 1 "/usr/include/bits/stat.h" 1 3 4 # 43 "/usr/include/bits/stat.h" 3 4 struct stat { __dev_t st_dev; __ino_t st_ino; __nlink_t st_nlink; __mode_t st_mode; __uid_t st_uid; __gid_t st_gid; int __pad0; __dev_t st_rdev; __off_t st_size; __blksize_t st_blksize; __blkcnt_t st_blocks; # 88 "/usr/include/bits/stat.h" 3 4 struct timespec st_atim; struct timespec st_mtim; struct timespec st_ctim; # 103 "/usr/include/bits/stat.h" 3 4 long int __unused[3]; # 112 "/usr/include/bits/stat.h" 3 4 }; # 108 "/usr/include/sys/stat.h" 2 3 4 # 209 "/usr/include/sys/stat.h" 3 4 extern int stat (__const char *__restrict __file, struct stat *__restrict __buf) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int fstat (int __fd, struct stat *__buf) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (2))); # 238 "/usr/include/sys/stat.h" 3 4 extern int fstatat (int __fd, __const char *__restrict __file, struct stat *__restrict __buf, int __flag) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (2, 3))); # 263 "/usr/include/sys/stat.h" 3 4 extern int lstat (__const char *__restrict __file, struct stat *__restrict __buf) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); # 284 "/usr/include/sys/stat.h" 3 4 extern int chmod (__const char *__file, __mode_t __mode) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int lchmod (__const char *__file, __mode_t __mode) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int fchmod (int __fd, __mode_t __mode) __attribute__ ((__nothrow__)); extern int fchmodat (int __fd, __const char *__file, __mode_t __mode, int __flag) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (2))) ; extern __mode_t umask (__mode_t __mask) __attribute__ ((__nothrow__)); # 321 "/usr/include/sys/stat.h" 3 4 extern int mkdir (__const char *__path, __mode_t __mode) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int mkdirat (int __fd, __const char *__path, __mode_t __mode) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (2))); extern int mknod (__const char *__path, __mode_t __mode, __dev_t __dev) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int mknodat (int __fd, __const char *__path, __mode_t __mode, __dev_t __dev) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (2))); extern int mkfifo (__const char *__path, __mode_t __mode) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int mkfifoat (int __fd, __const char *__path, __mode_t __mode) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (2))); extern int utimensat (int __fd, __const char *__path, __const struct timespec __times[2], int __flags) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (2))); extern int futimens (int __fd, __const struct timespec __times[2]) __attribute__ ((__nothrow__)); # 399 "/usr/include/sys/stat.h" 3 4 extern int __fxstat (int __ver, int __fildes, struct stat *__stat_buf) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (3))); extern int __xstat (int __ver, __const char *__filename, struct stat *__stat_buf) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (2, 3))); extern int __lxstat (int __ver, __const char *__filename, struct stat *__stat_buf) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (2, 3))); extern int __fxstatat (int __ver, int __fildes, __const char *__filename, struct stat *__stat_buf, int __flag) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (3, 4))); # 442 "/usr/include/sys/stat.h" 3 4 extern int __xmknod (int __ver, __const char *__path, __mode_t __mode, __dev_t *__dev) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (2, 4))); extern int __xmknodat (int __ver, int __fd, __const char *__path, __mode_t __mode, __dev_t *__dev) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (3, 5))); # 534 "/usr/include/sys/stat.h" 3 4 # 6 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 ================================================================================ TEST checkSysWait from config.headers(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/headers.py:173) TESTING: checkSysWait from config.headers(config/BuildSystem/config/headers.py:173) Check for POSIX.1 compatible sys/wait.h, and defines HAVE_SYS_WAIT_H if found sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" #include #include #ifndef WEXITSTATUS #define WEXITSTATUS(stat_val) ((unsigned)(stat_val) >> 8) #endif #ifndef WIFEXITED #define WIFEXITED(stat_val) (((stat_val) & 255) == 0) #endif int main() { int s; wait (&s); s = WIFEXITED (s) ? WEXITSTATUS (s) : 1; ; return 0; } Defined "HAVE_SYS_WAIT_H" to "1" ================================================================================ TEST checkTime from config.headers(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/headers.py:195) TESTING: checkTime from config.headers(config/BuildSystem/config/headers.py:195) Checks if you can safely include both and , and if so defines TIME_WITH_SYS_TIME Checking for header: time.h sh: gcc -E -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c Executing: gcc -E -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c sh: # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" # 1 "" # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/confdefs.h" 1 # 2 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conffix.h" 1 # 3 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 # 1 "/usr/include/time.h" 1 3 4 # 28 "/usr/include/time.h" 3 4 # 1 "/usr/include/features.h" 1 3 4 # 347 "/usr/include/features.h" 3 4 # 1 "/usr/include/sys/cdefs.h" 1 3 4 # 353 "/usr/include/sys/cdefs.h" 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 354 "/usr/include/sys/cdefs.h" 2 3 4 # 348 "/usr/include/features.h" 2 3 4 # 371 "/usr/include/features.h" 3 4 # 1 "/usr/include/gnu/stubs.h" 1 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 5 "/usr/include/gnu/stubs.h" 2 3 4 # 1 "/usr/include/gnu/stubs-64.h" 1 3 4 # 10 "/usr/include/gnu/stubs.h" 2 3 4 # 372 "/usr/include/features.h" 2 3 4 # 29 "/usr/include/time.h" 2 3 4 # 1 "/opt/gcc/4.8.1/snos/lib/gcc/x86_64-suse-linux/4.8.1/include/stddef.h" 1 3 4 # 212 "/opt/gcc/4.8.1/snos/lib/gcc/x86_64-suse-linux/4.8.1/include/stddef.h" 3 4 typedef long unsigned int size_t; # 39 "/usr/include/time.h" 2 3 4 # 1 "/usr/include/bits/time.h" 1 3 4 # 43 "/usr/include/time.h" 2 3 4 # 56 "/usr/include/time.h" 3 4 # 1 "/usr/include/bits/types.h" 1 3 4 # 28 "/usr/include/bits/types.h" 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 29 "/usr/include/bits/types.h" 2 3 4 typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; # 131 "/usr/include/bits/types.h" 3 4 # 1 "/usr/include/bits/typesizes.h" 1 3 4 # 132 "/usr/include/bits/types.h" 2 3 4 typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned long int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef long int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; # 57 "/usr/include/time.h" 2 3 4 typedef __clock_t clock_t; # 74 "/usr/include/time.h" 3 4 typedef __time_t time_t; # 92 "/usr/include/time.h" 3 4 typedef __clockid_t clockid_t; # 104 "/usr/include/time.h" 3 4 typedef __timer_t timer_t; # 120 "/usr/include/time.h" 3 4 struct timespec { __time_t tv_sec; long int tv_nsec; }; struct tm { int tm_sec; int tm_min; int tm_hour; int tm_mday; int tm_mon; int tm_year; int tm_wday; int tm_yday; int tm_isdst; long int tm_gmtoff; __const char *tm_zone; }; struct itimerspec { struct timespec it_interval; struct timespec it_value; }; struct sigevent; typedef __pid_t pid_t; extern clock_t clock (void) __attribute__ ((__nothrow__)); extern time_t time (time_t *__timer) __attribute__ ((__nothrow__)); extern double difftime (time_t __time1, time_t __time0) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern time_t mktime (struct tm *__tp) __attribute__ ((__nothrow__)); extern size_t strftime (char *__restrict __s, size_t __maxsize, __const char *__restrict __format, __const struct tm *__restrict __tp) __attribute__ ((__nothrow__)); # 215 "/usr/include/time.h" 3 4 # 1 "/usr/include/xlocale.h" 1 3 4 # 28 "/usr/include/xlocale.h" 3 4 typedef struct __locale_struct { struct locale_data *__locales[13]; const unsigned short int *__ctype_b; const int *__ctype_tolower; const int *__ctype_toupper; const char *__names[13]; } *__locale_t; typedef __locale_t locale_t; # 216 "/usr/include/time.h" 2 3 4 extern size_t strftime_l (char *__restrict __s, size_t __maxsize, __const char *__restrict __format, __const struct tm *__restrict __tp, __locale_t __loc) __attribute__ ((__nothrow__)); # 230 "/usr/include/time.h" 3 4 extern struct tm *gmtime (__const time_t *__timer) __attribute__ ((__nothrow__)); extern struct tm *localtime (__const time_t *__timer) __attribute__ ((__nothrow__)); extern struct tm *gmtime_r (__const time_t *__restrict __timer, struct tm *__restrict __tp) __attribute__ ((__nothrow__)); extern struct tm *localtime_r (__const time_t *__restrict __timer, struct tm *__restrict __tp) __attribute__ ((__nothrow__)); extern char *asctime (__const struct tm *__tp) __attribute__ ((__nothrow__)); extern char *ctime (__const time_t *__timer) __attribute__ ((__nothrow__)); extern char *asctime_r (__const struct tm *__restrict __tp, char *__restrict __buf) __attribute__ ((__nothrow__)); extern char *ctime_r (__const time_t *__restrict __timer, char *__restrict __buf) __attribute__ ((__nothrow__)); extern char *__tzname[2]; extern int __daylight; extern long int __timezone; extern char *tzname[2]; extern void tzset (void) __attribute__ ((__nothrow__)); extern int daylight; extern long int timezone; extern int stime (__const time_t *__when) __attribute__ ((__nothrow__)); # 313 "/usr/include/time.h" 3 4 extern time_t timegm (struct tm *__tp) __attribute__ ((__nothrow__)); extern time_t timelocal (struct tm *__tp) __attribute__ ((__nothrow__)); extern int dysize (int __year) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); # 328 "/usr/include/time.h" 3 4 extern int nanosleep (__const struct timespec *__requested_time, struct timespec *__remaining); extern int clock_getres (clockid_t __clock_id, struct timespec *__res) __attribute__ ((__nothrow__)); extern int clock_gettime (clockid_t __clock_id, struct timespec *__tp) __attribute__ ((__nothrow__)); extern int clock_settime (clockid_t __clock_id, __const struct timespec *__tp) __attribute__ ((__nothrow__)); extern int clock_nanosleep (clockid_t __clock_id, int __flags, __const struct timespec *__req, struct timespec *__rem); extern int clock_getcpuclockid (pid_t __pid, clockid_t *__clock_id) __attribute__ ((__nothrow__)); extern int timer_create (clockid_t __clock_id, struct sigevent *__restrict __evp, timer_t *__restrict __timerid) __attribute__ ((__nothrow__)); extern int timer_delete (timer_t __timerid) __attribute__ ((__nothrow__)); extern int timer_settime (timer_t __timerid, int __flags, __const struct itimerspec *__restrict __value, struct itimerspec *__restrict __ovalue) __attribute__ ((__nothrow__)); extern int timer_gettime (timer_t __timerid, struct itimerspec *__value) __attribute__ ((__nothrow__)); extern int timer_getoverrun (timer_t __timerid) __attribute__ ((__nothrow__)); # 417 "/usr/include/time.h" 3 4 # 3 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 Defined "HAVE_TIME_H" to "1" Checking for header: sys/time.h sh: gcc -E -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c Executing: gcc -E -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c sh: # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" # 1 "" # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/confdefs.h" 1 # 2 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conffix.h" 1 # 3 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 # 1 "/usr/include/sys/time.h" 1 3 4 # 23 "/usr/include/sys/time.h" 3 4 # 1 "/usr/include/features.h" 1 3 4 # 347 "/usr/include/features.h" 3 4 # 1 "/usr/include/sys/cdefs.h" 1 3 4 # 353 "/usr/include/sys/cdefs.h" 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 354 "/usr/include/sys/cdefs.h" 2 3 4 # 348 "/usr/include/features.h" 2 3 4 # 371 "/usr/include/features.h" 3 4 # 1 "/usr/include/gnu/stubs.h" 1 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 5 "/usr/include/gnu/stubs.h" 2 3 4 # 1 "/usr/include/gnu/stubs-64.h" 1 3 4 # 10 "/usr/include/gnu/stubs.h" 2 3 4 # 372 "/usr/include/features.h" 2 3 4 # 24 "/usr/include/sys/time.h" 2 3 4 # 1 "/usr/include/bits/types.h" 1 3 4 # 28 "/usr/include/bits/types.h" 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 29 "/usr/include/bits/types.h" 2 3 4 typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; # 131 "/usr/include/bits/types.h" 3 4 # 1 "/usr/include/bits/typesizes.h" 1 3 4 # 132 "/usr/include/bits/types.h" 2 3 4 typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned long int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef long int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; # 26 "/usr/include/sys/time.h" 2 3 4 # 1 "/usr/include/time.h" 1 3 4 # 74 "/usr/include/time.h" 3 4 typedef __time_t time_t; # 28 "/usr/include/sys/time.h" 2 3 4 # 1 "/usr/include/bits/time.h" 1 3 4 # 69 "/usr/include/bits/time.h" 3 4 struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; # 30 "/usr/include/sys/time.h" 2 3 4 # 1 "/usr/include/sys/select.h" 1 3 4 # 31 "/usr/include/sys/select.h" 3 4 # 1 "/usr/include/bits/select.h" 1 3 4 # 23 "/usr/include/bits/select.h" 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 24 "/usr/include/bits/select.h" 2 3 4 # 32 "/usr/include/sys/select.h" 2 3 4 # 1 "/usr/include/bits/sigset.h" 1 3 4 # 24 "/usr/include/bits/sigset.h" 3 4 typedef int __sig_atomic_t; typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; # 35 "/usr/include/sys/select.h" 2 3 4 typedef __sigset_t sigset_t; # 1 "/usr/include/time.h" 1 3 4 # 120 "/usr/include/time.h" 3 4 struct timespec { __time_t tv_sec; long int tv_nsec; }; # 45 "/usr/include/sys/select.h" 2 3 4 # 1 "/usr/include/bits/time.h" 1 3 4 # 47 "/usr/include/sys/select.h" 2 3 4 typedef __suseconds_t suseconds_t; typedef long int __fd_mask; # 67 "/usr/include/sys/select.h" 3 4 typedef struct { __fd_mask __fds_bits[1024 / (8 * (int) sizeof (__fd_mask))]; } fd_set; typedef __fd_mask fd_mask; # 99 "/usr/include/sys/select.h" 3 4 # 109 "/usr/include/sys/select.h" 3 4 extern int select (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, struct timeval *__restrict __timeout); # 121 "/usr/include/sys/select.h" 3 4 extern int pselect (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, const struct timespec *__restrict __timeout, const __sigset_t *__restrict __sigmask); # 32 "/usr/include/sys/time.h" 2 3 4 # 57 "/usr/include/sys/time.h" 3 4 struct timezone { int tz_minuteswest; int tz_dsttime; }; typedef struct timezone *__restrict __timezone_ptr_t; # 73 "/usr/include/sys/time.h" 3 4 extern int gettimeofday (struct timeval *__restrict __tv, __timezone_ptr_t __tz) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int settimeofday (__const struct timeval *__tv, __const struct timezone *__tz) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int adjtime (__const struct timeval *__delta, struct timeval *__olddelta) __attribute__ ((__nothrow__)); enum __itimer_which { ITIMER_REAL = 0, ITIMER_VIRTUAL = 1, ITIMER_PROF = 2 }; struct itimerval { struct timeval it_interval; struct timeval it_value; }; typedef int __itimer_which_t; extern int getitimer (__itimer_which_t __which, struct itimerval *__value) __attribute__ ((__nothrow__)); extern int setitimer (__itimer_which_t __which, __const struct itimerval *__restrict __new, struct itimerval *__restrict __old) __attribute__ ((__nothrow__)); extern int utimes (__const char *__file, __const struct timeval __tvp[2]) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int lutimes (__const char *__file, __const struct timeval __tvp[2]) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int futimes (int __fd, __const struct timeval __tvp[2]) __attribute__ ((__nothrow__)); # 191 "/usr/include/sys/time.h" 3 4 # 3 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 Defined "HAVE_SYS_TIME_H" to "1" sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" #include #include #include int main() { struct tm *tp = 0; if (tp); ; return 0; } Defined "TIME_WITH_SYS_TIME" to "1" ================================================================================ TEST checkMath from config.headers(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/headers.py:203) TESTING: checkMath from config.headers(config/BuildSystem/config/headers.py:203) Checks for the math headers and defines Checking for header: math.h sh: gcc -E -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c Executing: gcc -E -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c sh: # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" # 1 "" # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/confdefs.h" 1 # 2 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conffix.h" 1 # 3 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 # 1 "/usr/include/math.h" 1 3 4 # 28 "/usr/include/math.h" 3 4 # 1 "/usr/include/features.h" 1 3 4 # 347 "/usr/include/features.h" 3 4 # 1 "/usr/include/sys/cdefs.h" 1 3 4 # 353 "/usr/include/sys/cdefs.h" 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 354 "/usr/include/sys/cdefs.h" 2 3 4 # 348 "/usr/include/features.h" 2 3 4 # 371 "/usr/include/features.h" 3 4 # 1 "/usr/include/gnu/stubs.h" 1 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 5 "/usr/include/gnu/stubs.h" 2 3 4 # 1 "/usr/include/gnu/stubs-64.h" 1 3 4 # 10 "/usr/include/gnu/stubs.h" 2 3 4 # 372 "/usr/include/features.h" 2 3 4 # 29 "/usr/include/math.h" 2 3 4 # 1 "/usr/include/bits/huge_val.h" 1 3 4 # 35 "/usr/include/math.h" 2 3 4 # 1 "/usr/include/bits/huge_valf.h" 1 3 4 # 37 "/usr/include/math.h" 2 3 4 # 1 "/usr/include/bits/huge_vall.h" 1 3 4 # 38 "/usr/include/math.h" 2 3 4 # 1 "/usr/include/bits/inf.h" 1 3 4 # 41 "/usr/include/math.h" 2 3 4 # 1 "/usr/include/bits/nan.h" 1 3 4 # 44 "/usr/include/math.h" 2 3 4 # 1 "/usr/include/bits/mathdef.h" 1 3 4 # 26 "/usr/include/bits/mathdef.h" 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 27 "/usr/include/bits/mathdef.h" 2 3 4 typedef float float_t; typedef double double_t; # 48 "/usr/include/math.h" 2 3 4 # 71 "/usr/include/math.h" 3 4 # 1 "/usr/include/bits/mathcalls.h" 1 3 4 # 53 "/usr/include/bits/mathcalls.h" 3 4 extern double acos (double __x) __attribute__ ((__nothrow__)); extern double __acos (double __x) __attribute__ ((__nothrow__)); extern double asin (double __x) __attribute__ ((__nothrow__)); extern double __asin (double __x) __attribute__ ((__nothrow__)); extern double atan (double __x) __attribute__ ((__nothrow__)); extern double __atan (double __x) __attribute__ ((__nothrow__)); extern double atan2 (double __y, double __x) __attribute__ ((__nothrow__)); extern double __atan2 (double __y, double __x) __attribute__ ((__nothrow__)); extern double cos (double __x) __attribute__ ((__nothrow__)); extern double __cos (double __x) __attribute__ ((__nothrow__)); extern double sin (double __x) __attribute__ ((__nothrow__)); extern double __sin (double __x) __attribute__ ((__nothrow__)); extern double tan (double __x) __attribute__ ((__nothrow__)); extern double __tan (double __x) __attribute__ ((__nothrow__)); extern double cosh (double __x) __attribute__ ((__nothrow__)); extern double __cosh (double __x) __attribute__ ((__nothrow__)); extern double sinh (double __x) __attribute__ ((__nothrow__)); extern double __sinh (double __x) __attribute__ ((__nothrow__)); extern double tanh (double __x) __attribute__ ((__nothrow__)); extern double __tanh (double __x) __attribute__ ((__nothrow__)); # 87 "/usr/include/bits/mathcalls.h" 3 4 extern double acosh (double __x) __attribute__ ((__nothrow__)); extern double __acosh (double __x) __attribute__ ((__nothrow__)); extern double asinh (double __x) __attribute__ ((__nothrow__)); extern double __asinh (double __x) __attribute__ ((__nothrow__)); extern double atanh (double __x) __attribute__ ((__nothrow__)); extern double __atanh (double __x) __attribute__ ((__nothrow__)); extern double exp (double __x) __attribute__ ((__nothrow__)); extern double __exp (double __x) __attribute__ ((__nothrow__)); extern double frexp (double __x, int *__exponent) __attribute__ ((__nothrow__)); extern double __frexp (double __x, int *__exponent) __attribute__ ((__nothrow__)); extern double ldexp (double __x, int __exponent) __attribute__ ((__nothrow__)); extern double __ldexp (double __x, int __exponent) __attribute__ ((__nothrow__)); extern double log (double __x) __attribute__ ((__nothrow__)); extern double __log (double __x) __attribute__ ((__nothrow__)); extern double log10 (double __x) __attribute__ ((__nothrow__)); extern double __log10 (double __x) __attribute__ ((__nothrow__)); extern double modf (double __x, double *__iptr) __attribute__ ((__nothrow__)); extern double __modf (double __x, double *__iptr) __attribute__ ((__nothrow__)); # 127 "/usr/include/bits/mathcalls.h" 3 4 extern double expm1 (double __x) __attribute__ ((__nothrow__)); extern double __expm1 (double __x) __attribute__ ((__nothrow__)); extern double log1p (double __x) __attribute__ ((__nothrow__)); extern double __log1p (double __x) __attribute__ ((__nothrow__)); extern double logb (double __x) __attribute__ ((__nothrow__)); extern double __logb (double __x) __attribute__ ((__nothrow__)); extern double exp2 (double __x) __attribute__ ((__nothrow__)); extern double __exp2 (double __x) __attribute__ ((__nothrow__)); extern double log2 (double __x) __attribute__ ((__nothrow__)); extern double __log2 (double __x) __attribute__ ((__nothrow__)); extern double pow (double __x, double __y) __attribute__ ((__nothrow__)); extern double __pow (double __x, double __y) __attribute__ ((__nothrow__)); extern double sqrt (double __x) __attribute__ ((__nothrow__)); extern double __sqrt (double __x) __attribute__ ((__nothrow__)); extern double hypot (double __x, double __y) __attribute__ ((__nothrow__)); extern double __hypot (double __x, double __y) __attribute__ ((__nothrow__)); extern double cbrt (double __x) __attribute__ ((__nothrow__)); extern double __cbrt (double __x) __attribute__ ((__nothrow__)); extern double ceil (double __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern double __ceil (double __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern double fabs (double __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern double __fabs (double __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern double floor (double __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern double __floor (double __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern double fmod (double __x, double __y) __attribute__ ((__nothrow__)); extern double __fmod (double __x, double __y) __attribute__ ((__nothrow__)); extern int __isinf (double __value) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern int __finite (double __value) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern int isinf (double __value) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern int finite (double __value) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern double drem (double __x, double __y) __attribute__ ((__nothrow__)); extern double __drem (double __x, double __y) __attribute__ ((__nothrow__)); extern double significand (double __x) __attribute__ ((__nothrow__)); extern double __significand (double __x) __attribute__ ((__nothrow__)); extern double copysign (double __x, double __y) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern double __copysign (double __x, double __y) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern double nan (__const char *__tagb) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern double __nan (__const char *__tagb) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern int __isnan (double __value) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern int isnan (double __value) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern double j0 (double) __attribute__ ((__nothrow__)); extern double __j0 (double) __attribute__ ((__nothrow__)); extern double j1 (double) __attribute__ ((__nothrow__)); extern double __j1 (double) __attribute__ ((__nothrow__)); extern double jn (int, double) __attribute__ ((__nothrow__)); extern double __jn (int, double) __attribute__ ((__nothrow__)); extern double y0 (double) __attribute__ ((__nothrow__)); extern double __y0 (double) __attribute__ ((__nothrow__)); extern double y1 (double) __attribute__ ((__nothrow__)); extern double __y1 (double) __attribute__ ((__nothrow__)); extern double yn (int, double) __attribute__ ((__nothrow__)); extern double __yn (int, double) __attribute__ ((__nothrow__)); extern double erf (double) __attribute__ ((__nothrow__)); extern double __erf (double) __attribute__ ((__nothrow__)); extern double erfc (double) __attribute__ ((__nothrow__)); extern double __erfc (double) __attribute__ ((__nothrow__)); extern double lgamma (double) __attribute__ ((__nothrow__)); extern double __lgamma (double) __attribute__ ((__nothrow__)); extern double tgamma (double) __attribute__ ((__nothrow__)); extern double __tgamma (double) __attribute__ ((__nothrow__)); extern double gamma (double) __attribute__ ((__nothrow__)); extern double __gamma (double) __attribute__ ((__nothrow__)); extern double lgamma_r (double, int *__signgamp) __attribute__ ((__nothrow__)); extern double __lgamma_r (double, int *__signgamp) __attribute__ ((__nothrow__)); extern double rint (double __x) __attribute__ ((__nothrow__)); extern double __rint (double __x) __attribute__ ((__nothrow__)); extern double nextafter (double __x, double __y) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern double __nextafter (double __x, double __y) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern double nexttoward (double __x, long double __y) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern double __nexttoward (double __x, long double __y) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern double remainder (double __x, double __y) __attribute__ ((__nothrow__)); extern double __remainder (double __x, double __y) __attribute__ ((__nothrow__)); extern double scalbn (double __x, int __n) __attribute__ ((__nothrow__)); extern double __scalbn (double __x, int __n) __attribute__ ((__nothrow__)); extern int ilogb (double __x) __attribute__ ((__nothrow__)); extern int __ilogb (double __x) __attribute__ ((__nothrow__)); extern double scalbln (double __x, long int __n) __attribute__ ((__nothrow__)); extern double __scalbln (double __x, long int __n) __attribute__ ((__nothrow__)); extern double nearbyint (double __x) __attribute__ ((__nothrow__)); extern double __nearbyint (double __x) __attribute__ ((__nothrow__)); extern double round (double __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern double __round (double __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern double trunc (double __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern double __trunc (double __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern double remquo (double __x, double __y, int *__quo) __attribute__ ((__nothrow__)); extern double __remquo (double __x, double __y, int *__quo) __attribute__ ((__nothrow__)); extern long int lrint (double __x) __attribute__ ((__nothrow__)); extern long int __lrint (double __x) __attribute__ ((__nothrow__)); extern long long int llrint (double __x) __attribute__ ((__nothrow__)); extern long long int __llrint (double __x) __attribute__ ((__nothrow__)); extern long int lround (double __x) __attribute__ ((__nothrow__)); extern long int __lround (double __x) __attribute__ ((__nothrow__)); extern long long int llround (double __x) __attribute__ ((__nothrow__)); extern long long int __llround (double __x) __attribute__ ((__nothrow__)); extern double fdim (double __x, double __y) __attribute__ ((__nothrow__)); extern double __fdim (double __x, double __y) __attribute__ ((__nothrow__)); extern double fmax (double __x, double __y) __attribute__ ((__nothrow__)); extern double __fmax (double __x, double __y) __attribute__ ((__nothrow__)); extern double fmin (double __x, double __y) __attribute__ ((__nothrow__)); extern double __fmin (double __x, double __y) __attribute__ ((__nothrow__)); extern int __fpclassify (double __value) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern int __signbit (double __value) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern double fma (double __x, double __y, double __z) __attribute__ ((__nothrow__)); extern double __fma (double __x, double __y, double __z) __attribute__ ((__nothrow__)); extern double scalb (double __x, double __n) __attribute__ ((__nothrow__)); extern double __scalb (double __x, double __n) __attribute__ ((__nothrow__)); # 72 "/usr/include/math.h" 2 3 4 # 94 "/usr/include/math.h" 3 4 # 1 "/usr/include/bits/mathcalls.h" 1 3 4 # 53 "/usr/include/bits/mathcalls.h" 3 4 extern float acosf (float __x) __attribute__ ((__nothrow__)); extern float __acosf (float __x) __attribute__ ((__nothrow__)); extern float asinf (float __x) __attribute__ ((__nothrow__)); extern float __asinf (float __x) __attribute__ ((__nothrow__)); extern float atanf (float __x) __attribute__ ((__nothrow__)); extern float __atanf (float __x) __attribute__ ((__nothrow__)); extern float atan2f (float __y, float __x) __attribute__ ((__nothrow__)); extern float __atan2f (float __y, float __x) __attribute__ ((__nothrow__)); extern float cosf (float __x) __attribute__ ((__nothrow__)); extern float __cosf (float __x) __attribute__ ((__nothrow__)); extern float sinf (float __x) __attribute__ ((__nothrow__)); extern float __sinf (float __x) __attribute__ ((__nothrow__)); extern float tanf (float __x) __attribute__ ((__nothrow__)); extern float __tanf (float __x) __attribute__ ((__nothrow__)); extern float coshf (float __x) __attribute__ ((__nothrow__)); extern float __coshf (float __x) __attribute__ ((__nothrow__)); extern float sinhf (float __x) __attribute__ ((__nothrow__)); extern float __sinhf (float __x) __attribute__ ((__nothrow__)); extern float tanhf (float __x) __attribute__ ((__nothrow__)); extern float __tanhf (float __x) __attribute__ ((__nothrow__)); # 87 "/usr/include/bits/mathcalls.h" 3 4 extern float acoshf (float __x) __attribute__ ((__nothrow__)); extern float __acoshf (float __x) __attribute__ ((__nothrow__)); extern float asinhf (float __x) __attribute__ ((__nothrow__)); extern float __asinhf (float __x) __attribute__ ((__nothrow__)); extern float atanhf (float __x) __attribute__ ((__nothrow__)); extern float __atanhf (float __x) __attribute__ ((__nothrow__)); extern float expf (float __x) __attribute__ ((__nothrow__)); extern float __expf (float __x) __attribute__ ((__nothrow__)); extern float frexpf (float __x, int *__exponent) __attribute__ ((__nothrow__)); extern float __frexpf (float __x, int *__exponent) __attribute__ ((__nothrow__)); extern float ldexpf (float __x, int __exponent) __attribute__ ((__nothrow__)); extern float __ldexpf (float __x, int __exponent) __attribute__ ((__nothrow__)); extern float logf (float __x) __attribute__ ((__nothrow__)); extern float __logf (float __x) __attribute__ ((__nothrow__)); extern float log10f (float __x) __attribute__ ((__nothrow__)); extern float __log10f (float __x) __attribute__ ((__nothrow__)); extern float modff (float __x, float *__iptr) __attribute__ ((__nothrow__)); extern float __modff (float __x, float *__iptr) __attribute__ ((__nothrow__)); # 127 "/usr/include/bits/mathcalls.h" 3 4 extern float expm1f (float __x) __attribute__ ((__nothrow__)); extern float __expm1f (float __x) __attribute__ ((__nothrow__)); extern float log1pf (float __x) __attribute__ ((__nothrow__)); extern float __log1pf (float __x) __attribute__ ((__nothrow__)); extern float logbf (float __x) __attribute__ ((__nothrow__)); extern float __logbf (float __x) __attribute__ ((__nothrow__)); extern float exp2f (float __x) __attribute__ ((__nothrow__)); extern float __exp2f (float __x) __attribute__ ((__nothrow__)); extern float log2f (float __x) __attribute__ ((__nothrow__)); extern float __log2f (float __x) __attribute__ ((__nothrow__)); extern float powf (float __x, float __y) __attribute__ ((__nothrow__)); extern float __powf (float __x, float __y) __attribute__ ((__nothrow__)); extern float sqrtf (float __x) __attribute__ ((__nothrow__)); extern float __sqrtf (float __x) __attribute__ ((__nothrow__)); extern float hypotf (float __x, float __y) __attribute__ ((__nothrow__)); extern float __hypotf (float __x, float __y) __attribute__ ((__nothrow__)); extern float cbrtf (float __x) __attribute__ ((__nothrow__)); extern float __cbrtf (float __x) __attribute__ ((__nothrow__)); extern float ceilf (float __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern float __ceilf (float __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern float fabsf (float __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern float __fabsf (float __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern float floorf (float __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern float __floorf (float __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern float fmodf (float __x, float __y) __attribute__ ((__nothrow__)); extern float __fmodf (float __x, float __y) __attribute__ ((__nothrow__)); extern int __isinff (float __value) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern int __finitef (float __value) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern int isinff (float __value) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern int finitef (float __value) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern float dremf (float __x, float __y) __attribute__ ((__nothrow__)); extern float __dremf (float __x, float __y) __attribute__ ((__nothrow__)); extern float significandf (float __x) __attribute__ ((__nothrow__)); extern float __significandf (float __x) __attribute__ ((__nothrow__)); extern float copysignf (float __x, float __y) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern float __copysignf (float __x, float __y) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern float nanf (__const char *__tagb) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern float __nanf (__const char *__tagb) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern int __isnanf (float __value) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern int isnanf (float __value) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern float j0f (float) __attribute__ ((__nothrow__)); extern float __j0f (float) __attribute__ ((__nothrow__)); extern float j1f (float) __attribute__ ((__nothrow__)); extern float __j1f (float) __attribute__ ((__nothrow__)); extern float jnf (int, float) __attribute__ ((__nothrow__)); extern float __jnf (int, float) __attribute__ ((__nothrow__)); extern float y0f (float) __attribute__ ((__nothrow__)); extern float __y0f (float) __attribute__ ((__nothrow__)); extern float y1f (float) __attribute__ ((__nothrow__)); extern float __y1f (float) __attribute__ ((__nothrow__)); extern float ynf (int, float) __attribute__ ((__nothrow__)); extern float __ynf (int, float) __attribute__ ((__nothrow__)); extern float erff (float) __attribute__ ((__nothrow__)); extern float __erff (float) __attribute__ ((__nothrow__)); extern float erfcf (float) __attribute__ ((__nothrow__)); extern float __erfcf (float) __attribute__ ((__nothrow__)); extern float lgammaf (float) __attribute__ ((__nothrow__)); extern float __lgammaf (float) __attribute__ ((__nothrow__)); extern float tgammaf (float) __attribute__ ((__nothrow__)); extern float __tgammaf (float) __attribute__ ((__nothrow__)); extern float gammaf (float) __attribute__ ((__nothrow__)); extern float __gammaf (float) __attribute__ ((__nothrow__)); extern float lgammaf_r (float, int *__signgamp) __attribute__ ((__nothrow__)); extern float __lgammaf_r (float, int *__signgamp) __attribute__ ((__nothrow__)); extern float rintf (float __x) __attribute__ ((__nothrow__)); extern float __rintf (float __x) __attribute__ ((__nothrow__)); extern float nextafterf (float __x, float __y) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern float __nextafterf (float __x, float __y) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern float nexttowardf (float __x, long double __y) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern float __nexttowardf (float __x, long double __y) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern float remainderf (float __x, float __y) __attribute__ ((__nothrow__)); extern float __remainderf (float __x, float __y) __attribute__ ((__nothrow__)); extern float scalbnf (float __x, int __n) __attribute__ ((__nothrow__)); extern float __scalbnf (float __x, int __n) __attribute__ ((__nothrow__)); extern int ilogbf (float __x) __attribute__ ((__nothrow__)); extern int __ilogbf (float __x) __attribute__ ((__nothrow__)); extern float scalblnf (float __x, long int __n) __attribute__ ((__nothrow__)); extern float __scalblnf (float __x, long int __n) __attribute__ ((__nothrow__)); extern float nearbyintf (float __x) __attribute__ ((__nothrow__)); extern float __nearbyintf (float __x) __attribute__ ((__nothrow__)); extern float roundf (float __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern float __roundf (float __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern float truncf (float __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern float __truncf (float __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern float remquof (float __x, float __y, int *__quo) __attribute__ ((__nothrow__)); extern float __remquof (float __x, float __y, int *__quo) __attribute__ ((__nothrow__)); extern long int lrintf (float __x) __attribute__ ((__nothrow__)); extern long int __lrintf (float __x) __attribute__ ((__nothrow__)); extern long long int llrintf (float __x) __attribute__ ((__nothrow__)); extern long long int __llrintf (float __x) __attribute__ ((__nothrow__)); extern long int lroundf (float __x) __attribute__ ((__nothrow__)); extern long int __lroundf (float __x) __attribute__ ((__nothrow__)); extern long long int llroundf (float __x) __attribute__ ((__nothrow__)); extern long long int __llroundf (float __x) __attribute__ ((__nothrow__)); extern float fdimf (float __x, float __y) __attribute__ ((__nothrow__)); extern float __fdimf (float __x, float __y) __attribute__ ((__nothrow__)); extern float fmaxf (float __x, float __y) __attribute__ ((__nothrow__)); extern float __fmaxf (float __x, float __y) __attribute__ ((__nothrow__)); extern float fminf (float __x, float __y) __attribute__ ((__nothrow__)); extern float __fminf (float __x, float __y) __attribute__ ((__nothrow__)); extern int __fpclassifyf (float __value) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern int __signbitf (float __value) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern float fmaf (float __x, float __y, float __z) __attribute__ ((__nothrow__)); extern float __fmaf (float __x, float __y, float __z) __attribute__ ((__nothrow__)); extern float scalbf (float __x, float __n) __attribute__ ((__nothrow__)); extern float __scalbf (float __x, float __n) __attribute__ ((__nothrow__)); # 95 "/usr/include/math.h" 2 3 4 # 141 "/usr/include/math.h" 3 4 # 1 "/usr/include/bits/mathcalls.h" 1 3 4 # 53 "/usr/include/bits/mathcalls.h" 3 4 extern long double acosl (long double __x) __attribute__ ((__nothrow__)); extern long double __acosl (long double __x) __attribute__ ((__nothrow__)); extern long double asinl (long double __x) __attribute__ ((__nothrow__)); extern long double __asinl (long double __x) __attribute__ ((__nothrow__)); extern long double atanl (long double __x) __attribute__ ((__nothrow__)); extern long double __atanl (long double __x) __attribute__ ((__nothrow__)); extern long double atan2l (long double __y, long double __x) __attribute__ ((__nothrow__)); extern long double __atan2l (long double __y, long double __x) __attribute__ ((__nothrow__)); extern long double cosl (long double __x) __attribute__ ((__nothrow__)); extern long double __cosl (long double __x) __attribute__ ((__nothrow__)); extern long double sinl (long double __x) __attribute__ ((__nothrow__)); extern long double __sinl (long double __x) __attribute__ ((__nothrow__)); extern long double tanl (long double __x) __attribute__ ((__nothrow__)); extern long double __tanl (long double __x) __attribute__ ((__nothrow__)); extern long double coshl (long double __x) __attribute__ ((__nothrow__)); extern long double __coshl (long double __x) __attribute__ ((__nothrow__)); extern long double sinhl (long double __x) __attribute__ ((__nothrow__)); extern long double __sinhl (long double __x) __attribute__ ((__nothrow__)); extern long double tanhl (long double __x) __attribute__ ((__nothrow__)); extern long double __tanhl (long double __x) __attribute__ ((__nothrow__)); # 87 "/usr/include/bits/mathcalls.h" 3 4 extern long double acoshl (long double __x) __attribute__ ((__nothrow__)); extern long double __acoshl (long double __x) __attribute__ ((__nothrow__)); extern long double asinhl (long double __x) __attribute__ ((__nothrow__)); extern long double __asinhl (long double __x) __attribute__ ((__nothrow__)); extern long double atanhl (long double __x) __attribute__ ((__nothrow__)); extern long double __atanhl (long double __x) __attribute__ ((__nothrow__)); extern long double expl (long double __x) __attribute__ ((__nothrow__)); extern long double __expl (long double __x) __attribute__ ((__nothrow__)); extern long double frexpl (long double __x, int *__exponent) __attribute__ ((__nothrow__)); extern long double __frexpl (long double __x, int *__exponent) __attribute__ ((__nothrow__)); extern long double ldexpl (long double __x, int __exponent) __attribute__ ((__nothrow__)); extern long double __ldexpl (long double __x, int __exponent) __attribute__ ((__nothrow__)); extern long double logl (long double __x) __attribute__ ((__nothrow__)); extern long double __logl (long double __x) __attribute__ ((__nothrow__)); extern long double log10l (long double __x) __attribute__ ((__nothrow__)); extern long double __log10l (long double __x) __attribute__ ((__nothrow__)); extern long double modfl (long double __x, long double *__iptr) __attribute__ ((__nothrow__)); extern long double __modfl (long double __x, long double *__iptr) __attribute__ ((__nothrow__)); # 127 "/usr/include/bits/mathcalls.h" 3 4 extern long double expm1l (long double __x) __attribute__ ((__nothrow__)); extern long double __expm1l (long double __x) __attribute__ ((__nothrow__)); extern long double log1pl (long double __x) __attribute__ ((__nothrow__)); extern long double __log1pl (long double __x) __attribute__ ((__nothrow__)); extern long double logbl (long double __x) __attribute__ ((__nothrow__)); extern long double __logbl (long double __x) __attribute__ ((__nothrow__)); extern long double exp2l (long double __x) __attribute__ ((__nothrow__)); extern long double __exp2l (long double __x) __attribute__ ((__nothrow__)); extern long double log2l (long double __x) __attribute__ ((__nothrow__)); extern long double __log2l (long double __x) __attribute__ ((__nothrow__)); extern long double powl (long double __x, long double __y) __attribute__ ((__nothrow__)); extern long double __powl (long double __x, long double __y) __attribute__ ((__nothrow__)); extern long double sqrtl (long double __x) __attribute__ ((__nothrow__)); extern long double __sqrtl (long double __x) __attribute__ ((__nothrow__)); extern long double hypotl (long double __x, long double __y) __attribute__ ((__nothrow__)); extern long double __hypotl (long double __x, long double __y) __attribute__ ((__nothrow__)); extern long double cbrtl (long double __x) __attribute__ ((__nothrow__)); extern long double __cbrtl (long double __x) __attribute__ ((__nothrow__)); extern long double ceill (long double __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern long double __ceill (long double __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern long double fabsl (long double __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern long double __fabsl (long double __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern long double floorl (long double __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern long double __floorl (long double __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern long double fmodl (long double __x, long double __y) __attribute__ ((__nothrow__)); extern long double __fmodl (long double __x, long double __y) __attribute__ ((__nothrow__)); extern int __isinfl (long double __value) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern int __finitel (long double __value) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern int isinfl (long double __value) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern int finitel (long double __value) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern long double dreml (long double __x, long double __y) __attribute__ ((__nothrow__)); extern long double __dreml (long double __x, long double __y) __attribute__ ((__nothrow__)); extern long double significandl (long double __x) __attribute__ ((__nothrow__)); extern long double __significandl (long double __x) __attribute__ ((__nothrow__)); extern long double copysignl (long double __x, long double __y) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern long double __copysignl (long double __x, long double __y) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern long double nanl (__const char *__tagb) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern long double __nanl (__const char *__tagb) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern int __isnanl (long double __value) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern int isnanl (long double __value) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern long double j0l (long double) __attribute__ ((__nothrow__)); extern long double __j0l (long double) __attribute__ ((__nothrow__)); extern long double j1l (long double) __attribute__ ((__nothrow__)); extern long double __j1l (long double) __attribute__ ((__nothrow__)); extern long double jnl (int, long double) __attribute__ ((__nothrow__)); extern long double __jnl (int, long double) __attribute__ ((__nothrow__)); extern long double y0l (long double) __attribute__ ((__nothrow__)); extern long double __y0l (long double) __attribute__ ((__nothrow__)); extern long double y1l (long double) __attribute__ ((__nothrow__)); extern long double __y1l (long double) __attribute__ ((__nothrow__)); extern long double ynl (int, long double) __attribute__ ((__nothrow__)); extern long double __ynl (int, long double) __attribute__ ((__nothrow__)); extern long double erfl (long double) __attribute__ ((__nothrow__)); extern long double __erfl (long double) __attribute__ ((__nothrow__)); extern long double erfcl (long double) __attribute__ ((__nothrow__)); extern long double __erfcl (long double) __attribute__ ((__nothrow__)); extern long double lgammal (long double) __attribute__ ((__nothrow__)); extern long double __lgammal (long double) __attribute__ ((__nothrow__)); extern long double tgammal (long double) __attribute__ ((__nothrow__)); extern long double __tgammal (long double) __attribute__ ((__nothrow__)); extern long double gammal (long double) __attribute__ ((__nothrow__)); extern long double __gammal (long double) __attribute__ ((__nothrow__)); extern long double lgammal_r (long double, int *__signgamp) __attribute__ ((__nothrow__)); extern long double __lgammal_r (long double, int *__signgamp) __attribute__ ((__nothrow__)); extern long double rintl (long double __x) __attribute__ ((__nothrow__)); extern long double __rintl (long double __x) __attribute__ ((__nothrow__)); extern long double nextafterl (long double __x, long double __y) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern long double __nextafterl (long double __x, long double __y) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern long double nexttowardl (long double __x, long double __y) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern long double __nexttowardl (long double __x, long double __y) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern long double remainderl (long double __x, long double __y) __attribute__ ((__nothrow__)); extern long double __remainderl (long double __x, long double __y) __attribute__ ((__nothrow__)); extern long double scalbnl (long double __x, int __n) __attribute__ ((__nothrow__)); extern long double __scalbnl (long double __x, int __n) __attribute__ ((__nothrow__)); extern int ilogbl (long double __x) __attribute__ ((__nothrow__)); extern int __ilogbl (long double __x) __attribute__ ((__nothrow__)); extern long double scalblnl (long double __x, long int __n) __attribute__ ((__nothrow__)); extern long double __scalblnl (long double __x, long int __n) __attribute__ ((__nothrow__)); extern long double nearbyintl (long double __x) __attribute__ ((__nothrow__)); extern long double __nearbyintl (long double __x) __attribute__ ((__nothrow__)); extern long double roundl (long double __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern long double __roundl (long double __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern long double truncl (long double __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern long double __truncl (long double __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern long double remquol (long double __x, long double __y, int *__quo) __attribute__ ((__nothrow__)); extern long double __remquol (long double __x, long double __y, int *__quo) __attribute__ ((__nothrow__)); extern long int lrintl (long double __x) __attribute__ ((__nothrow__)); extern long int __lrintl (long double __x) __attribute__ ((__nothrow__)); extern long long int llrintl (long double __x) __attribute__ ((__nothrow__)); extern long long int __llrintl (long double __x) __attribute__ ((__nothrow__)); extern long int lroundl (long double __x) __attribute__ ((__nothrow__)); extern long int __lroundl (long double __x) __attribute__ ((__nothrow__)); extern long long int llroundl (long double __x) __attribute__ ((__nothrow__)); extern long long int __llroundl (long double __x) __attribute__ ((__nothrow__)); extern long double fdiml (long double __x, long double __y) __attribute__ ((__nothrow__)); extern long double __fdiml (long double __x, long double __y) __attribute__ ((__nothrow__)); extern long double fmaxl (long double __x, long double __y) __attribute__ ((__nothrow__)); extern long double __fmaxl (long double __x, long double __y) __attribute__ ((__nothrow__)); extern long double fminl (long double __x, long double __y) __attribute__ ((__nothrow__)); extern long double __fminl (long double __x, long double __y) __attribute__ ((__nothrow__)); extern int __fpclassifyl (long double __value) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern int __signbitl (long double __value) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern long double fmal (long double __x, long double __y, long double __z) __attribute__ ((__nothrow__)); extern long double __fmal (long double __x, long double __y, long double __z) __attribute__ ((__nothrow__)); extern long double scalbl (long double __x, long double __n) __attribute__ ((__nothrow__)); extern long double __scalbl (long double __x, long double __n) __attribute__ ((__nothrow__)); # 142 "/usr/include/math.h" 2 3 4 # 157 "/usr/include/math.h" 3 4 extern int signgam; # 198 "/usr/include/math.h" 3 4 enum { FP_NAN, FP_INFINITE, FP_ZERO, FP_SUBNORMAL, FP_NORMAL }; # 291 "/usr/include/math.h" 3 4 typedef enum { _IEEE_ = -1, _SVID_, _XOPEN_, _POSIX_, _ISOC_ } _LIB_VERSION_TYPE; extern _LIB_VERSION_TYPE _LIB_VERSION; # 316 "/usr/include/math.h" 3 4 struct exception { int type; char *name; double arg1; double arg2; double retval; }; extern int matherr (struct exception *__exc); # 472 "/usr/include/math.h" 3 4 # 3 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 Defined "HAVE_MATH_H" to "1" sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" #include int main() { double pi = M_PI; if (pi); ; return 0; } Found math #defines, like M_PI ================================================================================ TEST check from config.headers(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/socket.h sh: gcc -E -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c Executing: gcc -E -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c sh: # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" # 1 "" # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/confdefs.h" 1 # 2 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conffix.h" 1 # 3 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 # 1 "/usr/include/sys/socket.h" 1 3 4 # 24 "/usr/include/sys/socket.h" 3 4 # 1 "/usr/include/features.h" 1 3 4 # 347 "/usr/include/features.h" 3 4 # 1 "/usr/include/sys/cdefs.h" 1 3 4 # 353 "/usr/include/sys/cdefs.h" 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 354 "/usr/include/sys/cdefs.h" 2 3 4 # 348 "/usr/include/features.h" 2 3 4 # 371 "/usr/include/features.h" 3 4 # 1 "/usr/include/gnu/stubs.h" 1 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 5 "/usr/include/gnu/stubs.h" 2 3 4 # 1 "/usr/include/gnu/stubs-64.h" 1 3 4 # 10 "/usr/include/gnu/stubs.h" 2 3 4 # 372 "/usr/include/features.h" 2 3 4 # 25 "/usr/include/sys/socket.h" 2 3 4 # 1 "/usr/include/sys/uio.h" 1 3 4 # 24 "/usr/include/sys/uio.h" 3 4 # 1 "/usr/include/sys/types.h" 1 3 4 # 29 "/usr/include/sys/types.h" 3 4 # 1 "/usr/include/bits/types.h" 1 3 4 # 28 "/usr/include/bits/types.h" 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 29 "/usr/include/bits/types.h" 2 3 4 typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; # 131 "/usr/include/bits/types.h" 3 4 # 1 "/usr/include/bits/typesizes.h" 1 3 4 # 132 "/usr/include/bits/types.h" 2 3 4 typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned long int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef long int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; # 32 "/usr/include/sys/types.h" 2 3 4 typedef __u_char u_char; typedef __u_short u_short; typedef __u_int u_int; typedef __u_long u_long; typedef __quad_t quad_t; typedef __u_quad_t u_quad_t; typedef __fsid_t fsid_t; typedef __loff_t loff_t; typedef __ino_t ino_t; # 62 "/usr/include/sys/types.h" 3 4 typedef __dev_t dev_t; typedef __gid_t gid_t; typedef __mode_t mode_t; typedef __nlink_t nlink_t; typedef __uid_t uid_t; typedef __off_t off_t; # 100 "/usr/include/sys/types.h" 3 4 typedef __pid_t pid_t; typedef __id_t id_t; typedef __ssize_t ssize_t; typedef __daddr_t daddr_t; typedef __caddr_t caddr_t; typedef __key_t key_t; # 133 "/usr/include/sys/types.h" 3 4 # 1 "/usr/include/time.h" 1 3 4 # 74 "/usr/include/time.h" 3 4 typedef __time_t time_t; # 92 "/usr/include/time.h" 3 4 typedef __clockid_t clockid_t; # 104 "/usr/include/time.h" 3 4 typedef __timer_t timer_t; # 134 "/usr/include/sys/types.h" 2 3 4 # 147 "/usr/include/sys/types.h" 3 4 # 1 "/opt/gcc/4.8.1/snos/lib/gcc/x86_64-suse-linux/4.8.1/include/stddef.h" 1 3 4 # 212 "/opt/gcc/4.8.1/snos/lib/gcc/x86_64-suse-linux/4.8.1/include/stddef.h" 3 4 typedef long unsigned int size_t; # 148 "/usr/include/sys/types.h" 2 3 4 typedef unsigned long int ulong; typedef unsigned short int ushort; typedef unsigned int uint; # 195 "/usr/include/sys/types.h" 3 4 typedef int int8_t __attribute__ ((__mode__ (__QI__))); typedef int int16_t __attribute__ ((__mode__ (__HI__))); typedef int int32_t __attribute__ ((__mode__ (__SI__))); typedef int int64_t __attribute__ ((__mode__ (__DI__))); typedef unsigned int u_int8_t __attribute__ ((__mode__ (__QI__))); typedef unsigned int u_int16_t __attribute__ ((__mode__ (__HI__))); typedef unsigned int u_int32_t __attribute__ ((__mode__ (__SI__))); typedef unsigned int u_int64_t __attribute__ ((__mode__ (__DI__))); typedef int register_t __attribute__ ((__mode__ (__word__))); # 217 "/usr/include/sys/types.h" 3 4 # 1 "/usr/include/endian.h" 1 3 4 # 37 "/usr/include/endian.h" 3 4 # 1 "/usr/include/bits/endian.h" 1 3 4 # 38 "/usr/include/endian.h" 2 3 4 # 61 "/usr/include/endian.h" 3 4 # 1 "/usr/include/bits/byteswap.h" 1 3 4 # 28 "/usr/include/bits/byteswap.h" 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 29 "/usr/include/bits/byteswap.h" 2 3 4 # 62 "/usr/include/endian.h" 2 3 4 # 218 "/usr/include/sys/types.h" 2 3 4 # 1 "/usr/include/sys/select.h" 1 3 4 # 31 "/usr/include/sys/select.h" 3 4 # 1 "/usr/include/bits/select.h" 1 3 4 # 23 "/usr/include/bits/select.h" 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 24 "/usr/include/bits/select.h" 2 3 4 # 32 "/usr/include/sys/select.h" 2 3 4 # 1 "/usr/include/bits/sigset.h" 1 3 4 # 24 "/usr/include/bits/sigset.h" 3 4 typedef int __sig_atomic_t; typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; # 35 "/usr/include/sys/select.h" 2 3 4 typedef __sigset_t sigset_t; # 1 "/usr/include/time.h" 1 3 4 # 120 "/usr/include/time.h" 3 4 struct timespec { __time_t tv_sec; long int tv_nsec; }; # 45 "/usr/include/sys/select.h" 2 3 4 # 1 "/usr/include/bits/time.h" 1 3 4 # 69 "/usr/include/bits/time.h" 3 4 struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; # 47 "/usr/include/sys/select.h" 2 3 4 typedef __suseconds_t suseconds_t; typedef long int __fd_mask; # 67 "/usr/include/sys/select.h" 3 4 typedef struct { __fd_mask __fds_bits[1024 / (8 * (int) sizeof (__fd_mask))]; } fd_set; typedef __fd_mask fd_mask; # 99 "/usr/include/sys/select.h" 3 4 # 109 "/usr/include/sys/select.h" 3 4 extern int select (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, struct timeval *__restrict __timeout); # 121 "/usr/include/sys/select.h" 3 4 extern int pselect (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, const struct timespec *__restrict __timeout, const __sigset_t *__restrict __sigmask); # 221 "/usr/include/sys/types.h" 2 3 4 # 1 "/usr/include/sys/sysmacros.h" 1 3 4 # 30 "/usr/include/sys/sysmacros.h" 3 4 __extension__ extern unsigned int gnu_dev_major (unsigned long long int __dev) __attribute__ ((__nothrow__)); __extension__ extern unsigned int gnu_dev_minor (unsigned long long int __dev) __attribute__ ((__nothrow__)); __extension__ extern unsigned long long int gnu_dev_makedev (unsigned int __major, unsigned int __minor) __attribute__ ((__nothrow__)); # 224 "/usr/include/sys/types.h" 2 3 4 # 235 "/usr/include/sys/types.h" 3 4 typedef __blkcnt_t blkcnt_t; typedef __fsblkcnt_t fsblkcnt_t; typedef __fsfilcnt_t fsfilcnt_t; # 270 "/usr/include/sys/types.h" 3 4 # 1 "/usr/include/bits/pthreadtypes.h" 1 3 4 # 23 "/usr/include/bits/pthreadtypes.h" 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 24 "/usr/include/bits/pthreadtypes.h" 2 3 4 # 50 "/usr/include/bits/pthreadtypes.h" 3 4 typedef unsigned long int pthread_t; typedef union { char __size[56]; long int __align; } pthread_attr_t; typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; # 76 "/usr/include/bits/pthreadtypes.h" 3 4 typedef union { struct __pthread_mutex_s { int __lock; unsigned int __count; int __owner; unsigned int __nusers; int __kind; int __spins; __pthread_list_t __list; # 101 "/usr/include/bits/pthreadtypes.h" 3 4 } __data; char __size[40]; long int __align; } pthread_mutex_t; typedef union { char __size[4]; int __align; } pthread_mutexattr_t; typedef union { struct { int __lock; unsigned int __futex; __extension__ unsigned long long int __total_seq; __extension__ unsigned long long int __wakeup_seq; __extension__ unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; __extension__ long long int __align; } pthread_cond_t; typedef union { char __size[4]; int __align; } pthread_condattr_t; typedef unsigned int pthread_key_t; typedef int pthread_once_t; typedef union { struct { int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; unsigned int __flags; } __data; # 187 "/usr/include/bits/pthreadtypes.h" 3 4 char __size[56]; long int __align; } pthread_rwlock_t; typedef union { char __size[8]; long int __align; } pthread_rwlockattr_t; typedef volatile int pthread_spinlock_t; typedef union { char __size[32]; long int __align; } pthread_barrier_t; typedef union { char __size[4]; int __align; } pthread_barrierattr_t; # 271 "/usr/include/sys/types.h" 2 3 4 # 25 "/usr/include/sys/uio.h" 2 3 4 # 1 "/usr/include/bits/uio.h" 1 3 4 # 44 "/usr/include/bits/uio.h" 3 4 struct iovec { void *iov_base; size_t iov_len; }; # 30 "/usr/include/sys/uio.h" 2 3 4 # 40 "/usr/include/sys/uio.h" 3 4 extern ssize_t readv (int __fd, __const struct iovec *__iovec, int __count) ; # 51 "/usr/include/sys/uio.h" 3 4 extern ssize_t writev (int __fd, __const struct iovec *__iovec, int __count) ; # 66 "/usr/include/sys/uio.h" 3 4 extern ssize_t preadv (int __fd, __const struct iovec *__iovec, int __count, __off_t __offset) ; # 78 "/usr/include/sys/uio.h" 3 4 extern ssize_t pwritev (int __fd, __const struct iovec *__iovec, int __count, __off_t __offset) ; # 121 "/usr/include/sys/uio.h" 3 4 # 29 "/usr/include/sys/socket.h" 2 3 4 # 1 "/opt/gcc/4.8.1/snos/lib/gcc/x86_64-suse-linux/4.8.1/include/stddef.h" 1 3 4 # 31 "/usr/include/sys/socket.h" 2 3 4 # 40 "/usr/include/sys/socket.h" 3 4 # 1 "/usr/include/bits/socket.h" 1 3 4 # 29 "/usr/include/bits/socket.h" 3 4 # 1 "/opt/gcc/4.8.1/snos/lib/gcc/x86_64-suse-linux/4.8.1/include/stddef.h" 1 3 4 # 30 "/usr/include/bits/socket.h" 2 3 4 typedef __socklen_t socklen_t; enum __socket_type { SOCK_STREAM = 1, SOCK_DGRAM = 2, SOCK_RAW = 3, SOCK_RDM = 4, SOCK_SEQPACKET = 5, SOCK_DCCP = 6, SOCK_PACKET = 10, SOCK_CLOEXEC = 02000000, SOCK_NONBLOCK = 04000 }; # 175 "/usr/include/bits/socket.h" 3 4 # 1 "/usr/include/bits/sockaddr.h" 1 3 4 # 29 "/usr/include/bits/sockaddr.h" 3 4 typedef unsigned short int sa_family_t; # 176 "/usr/include/bits/socket.h" 2 3 4 struct sockaddr { sa_family_t sa_family; char sa_data[14]; }; # 191 "/usr/include/bits/socket.h" 3 4 struct sockaddr_storage { sa_family_t ss_family; unsigned long int __ss_align; char __ss_padding[(128 - (2 * sizeof (unsigned long int)))]; }; enum { MSG_OOB = 0x01, MSG_PEEK = 0x02, MSG_DONTROUTE = 0x04, MSG_CTRUNC = 0x08, MSG_PROXY = 0x10, MSG_TRUNC = 0x20, MSG_DONTWAIT = 0x40, MSG_EOR = 0x80, MSG_WAITALL = 0x100, MSG_FIN = 0x200, MSG_SYN = 0x400, MSG_CONFIRM = 0x800, MSG_RST = 0x1000, MSG_ERRQUEUE = 0x2000, MSG_NOSIGNAL = 0x4000, MSG_MORE = 0x8000, MSG_CMSG_CLOEXEC = 0x40000000 }; struct msghdr { void *msg_name; socklen_t msg_namelen; struct iovec *msg_iov; size_t msg_iovlen; void *msg_control; size_t msg_controllen; int msg_flags; }; struct cmsghdr { size_t cmsg_len; int cmsg_level; int cmsg_type; __extension__ unsigned char __cmsg_data []; }; # 297 "/usr/include/bits/socket.h" 3 4 extern struct cmsghdr *__cmsg_nxthdr (struct msghdr *__mhdr, struct cmsghdr *__cmsg) __attribute__ ((__nothrow__)); # 324 "/usr/include/bits/socket.h" 3 4 enum { SCM_RIGHTS = 0x01 }; # 370 "/usr/include/bits/socket.h" 3 4 # 1 "/usr/include/asm/socket.h" 1 3 4 # 1 "/usr/include/asm-generic/socket.h" 1 3 4 # 1 "/usr/include/asm/sockios.h" 1 3 4 # 1 "/usr/include/asm-generic/sockios.h" 1 3 4 # 1 "/usr/include/asm/sockios.h" 2 3 4 # 5 "/usr/include/asm-generic/socket.h" 2 3 4 # 1 "/usr/include/asm/socket.h" 2 3 4 # 371 "/usr/include/bits/socket.h" 2 3 4 # 404 "/usr/include/bits/socket.h" 3 4 struct linger { int l_onoff; int l_linger; }; # 41 "/usr/include/sys/socket.h" 2 3 4 struct osockaddr { unsigned short int sa_family; unsigned char sa_data[14]; }; enum { SHUT_RD = 0, SHUT_WR, SHUT_RDWR }; # 105 "/usr/include/sys/socket.h" 3 4 extern int socket (int __domain, int __type, int __protocol) __attribute__ ((__nothrow__)); extern int socketpair (int __domain, int __type, int __protocol, int __fds[2]) __attribute__ ((__nothrow__)); extern int bind (int __fd, __const struct sockaddr * __addr, socklen_t __len) __attribute__ ((__nothrow__)); extern int getsockname (int __fd, struct sockaddr *__restrict __addr, socklen_t *__restrict __len) __attribute__ ((__nothrow__)); # 129 "/usr/include/sys/socket.h" 3 4 extern int connect (int __fd, __const struct sockaddr * __addr, socklen_t __len); extern int getpeername (int __fd, struct sockaddr *__restrict __addr, socklen_t *__restrict __len) __attribute__ ((__nothrow__)); extern ssize_t send (int __fd, __const void *__buf, size_t __n, int __flags); extern ssize_t recv (int __fd, void *__buf, size_t __n, int __flags); extern ssize_t sendto (int __fd, __const void *__buf, size_t __n, int __flags, __const struct sockaddr * __addr, socklen_t __addr_len); # 166 "/usr/include/sys/socket.h" 3 4 extern ssize_t recvfrom (int __fd, void *__restrict __buf, size_t __n, int __flags, struct sockaddr *__restrict __addr, socklen_t *__restrict __addr_len); extern ssize_t sendmsg (int __fd, __const struct msghdr *__message, int __flags); extern ssize_t recvmsg (int __fd, struct msghdr *__message, int __flags); extern int getsockopt (int __fd, int __level, int __optname, void *__restrict __optval, socklen_t *__restrict __optlen) __attribute__ ((__nothrow__)); extern int setsockopt (int __fd, int __level, int __optname, __const void *__optval, socklen_t __optlen) __attribute__ ((__nothrow__)); extern int listen (int __fd, int __n) __attribute__ ((__nothrow__)); # 214 "/usr/include/sys/socket.h" 3 4 extern int accept (int __fd, struct sockaddr *__restrict __addr, socklen_t *__restrict __addr_len); # 232 "/usr/include/sys/socket.h" 3 4 extern int shutdown (int __fd, int __how) __attribute__ ((__nothrow__)); extern int sockatmark (int __fd) __attribute__ ((__nothrow__)); extern int isfdtype (int __fd, int __fdtype) __attribute__ ((__nothrow__)); # 254 "/usr/include/sys/socket.h" 3 4 # 3 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 Defined "HAVE_SYS_SOCKET_H" to "1" ================================================================================ TEST check from config.headers(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/types.h sh: gcc -E -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c Executing: gcc -E -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c sh: # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" # 1 "" # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/confdefs.h" 1 # 2 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conffix.h" 1 # 3 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 # 1 "/usr/include/sys/types.h" 1 3 4 # 27 "/usr/include/sys/types.h" 3 4 # 1 "/usr/include/features.h" 1 3 4 # 347 "/usr/include/features.h" 3 4 # 1 "/usr/include/sys/cdefs.h" 1 3 4 # 353 "/usr/include/sys/cdefs.h" 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 354 "/usr/include/sys/cdefs.h" 2 3 4 # 348 "/usr/include/features.h" 2 3 4 # 371 "/usr/include/features.h" 3 4 # 1 "/usr/include/gnu/stubs.h" 1 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 5 "/usr/include/gnu/stubs.h" 2 3 4 # 1 "/usr/include/gnu/stubs-64.h" 1 3 4 # 10 "/usr/include/gnu/stubs.h" 2 3 4 # 372 "/usr/include/features.h" 2 3 4 # 28 "/usr/include/sys/types.h" 2 3 4 # 1 "/usr/include/bits/types.h" 1 3 4 # 28 "/usr/include/bits/types.h" 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 29 "/usr/include/bits/types.h" 2 3 4 typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; # 131 "/usr/include/bits/types.h" 3 4 # 1 "/usr/include/bits/typesizes.h" 1 3 4 # 132 "/usr/include/bits/types.h" 2 3 4 typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned long int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef long int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; # 32 "/usr/include/sys/types.h" 2 3 4 typedef __u_char u_char; typedef __u_short u_short; typedef __u_int u_int; typedef __u_long u_long; typedef __quad_t quad_t; typedef __u_quad_t u_quad_t; typedef __fsid_t fsid_t; typedef __loff_t loff_t; typedef __ino_t ino_t; # 62 "/usr/include/sys/types.h" 3 4 typedef __dev_t dev_t; typedef __gid_t gid_t; typedef __mode_t mode_t; typedef __nlink_t nlink_t; typedef __uid_t uid_t; typedef __off_t off_t; # 100 "/usr/include/sys/types.h" 3 4 typedef __pid_t pid_t; typedef __id_t id_t; typedef __ssize_t ssize_t; typedef __daddr_t daddr_t; typedef __caddr_t caddr_t; typedef __key_t key_t; # 133 "/usr/include/sys/types.h" 3 4 # 1 "/usr/include/time.h" 1 3 4 # 74 "/usr/include/time.h" 3 4 typedef __time_t time_t; # 92 "/usr/include/time.h" 3 4 typedef __clockid_t clockid_t; # 104 "/usr/include/time.h" 3 4 typedef __timer_t timer_t; # 134 "/usr/include/sys/types.h" 2 3 4 # 147 "/usr/include/sys/types.h" 3 4 # 1 "/opt/gcc/4.8.1/snos/lib/gcc/x86_64-suse-linux/4.8.1/include/stddef.h" 1 3 4 # 212 "/opt/gcc/4.8.1/snos/lib/gcc/x86_64-suse-linux/4.8.1/include/stddef.h" 3 4 typedef long unsigned int size_t; # 148 "/usr/include/sys/types.h" 2 3 4 typedef unsigned long int ulong; typedef unsigned short int ushort; typedef unsigned int uint; # 195 "/usr/include/sys/types.h" 3 4 typedef int int8_t __attribute__ ((__mode__ (__QI__))); typedef int int16_t __attribute__ ((__mode__ (__HI__))); typedef int int32_t __attribute__ ((__mode__ (__SI__))); typedef int int64_t __attribute__ ((__mode__ (__DI__))); typedef unsigned int u_int8_t __attribute__ ((__mode__ (__QI__))); typedef unsigned int u_int16_t __attribute__ ((__mode__ (__HI__))); typedef unsigned int u_int32_t __attribute__ ((__mode__ (__SI__))); typedef unsigned int u_int64_t __attribute__ ((__mode__ (__DI__))); typedef int register_t __attribute__ ((__mode__ (__word__))); # 217 "/usr/include/sys/types.h" 3 4 # 1 "/usr/include/endian.h" 1 3 4 # 37 "/usr/include/endian.h" 3 4 # 1 "/usr/include/bits/endian.h" 1 3 4 # 38 "/usr/include/endian.h" 2 3 4 # 61 "/usr/include/endian.h" 3 4 # 1 "/usr/include/bits/byteswap.h" 1 3 4 # 28 "/usr/include/bits/byteswap.h" 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 29 "/usr/include/bits/byteswap.h" 2 3 4 # 62 "/usr/include/endian.h" 2 3 4 # 218 "/usr/include/sys/types.h" 2 3 4 # 1 "/usr/include/sys/select.h" 1 3 4 # 31 "/usr/include/sys/select.h" 3 4 # 1 "/usr/include/bits/select.h" 1 3 4 # 23 "/usr/include/bits/select.h" 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 24 "/usr/include/bits/select.h" 2 3 4 # 32 "/usr/include/sys/select.h" 2 3 4 # 1 "/usr/include/bits/sigset.h" 1 3 4 # 24 "/usr/include/bits/sigset.h" 3 4 typedef int __sig_atomic_t; typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; # 35 "/usr/include/sys/select.h" 2 3 4 typedef __sigset_t sigset_t; # 1 "/usr/include/time.h" 1 3 4 # 120 "/usr/include/time.h" 3 4 struct timespec { __time_t tv_sec; long int tv_nsec; }; # 45 "/usr/include/sys/select.h" 2 3 4 # 1 "/usr/include/bits/time.h" 1 3 4 # 69 "/usr/include/bits/time.h" 3 4 struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; # 47 "/usr/include/sys/select.h" 2 3 4 typedef __suseconds_t suseconds_t; typedef long int __fd_mask; # 67 "/usr/include/sys/select.h" 3 4 typedef struct { __fd_mask __fds_bits[1024 / (8 * (int) sizeof (__fd_mask))]; } fd_set; typedef __fd_mask fd_mask; # 99 "/usr/include/sys/select.h" 3 4 # 109 "/usr/include/sys/select.h" 3 4 extern int select (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, struct timeval *__restrict __timeout); # 121 "/usr/include/sys/select.h" 3 4 extern int pselect (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, const struct timespec *__restrict __timeout, const __sigset_t *__restrict __sigmask); # 221 "/usr/include/sys/types.h" 2 3 4 # 1 "/usr/include/sys/sysmacros.h" 1 3 4 # 30 "/usr/include/sys/sysmacros.h" 3 4 __extension__ extern unsigned int gnu_dev_major (unsigned long long int __dev) __attribute__ ((__nothrow__)); __extension__ extern unsigned int gnu_dev_minor (unsigned long long int __dev) __attribute__ ((__nothrow__)); __extension__ extern unsigned long long int gnu_dev_makedev (unsigned int __major, unsigned int __minor) __attribute__ ((__nothrow__)); # 224 "/usr/include/sys/types.h" 2 3 4 # 235 "/usr/include/sys/types.h" 3 4 typedef __blkcnt_t blkcnt_t; typedef __fsblkcnt_t fsblkcnt_t; typedef __fsfilcnt_t fsfilcnt_t; # 270 "/usr/include/sys/types.h" 3 4 # 1 "/usr/include/bits/pthreadtypes.h" 1 3 4 # 23 "/usr/include/bits/pthreadtypes.h" 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 24 "/usr/include/bits/pthreadtypes.h" 2 3 4 # 50 "/usr/include/bits/pthreadtypes.h" 3 4 typedef unsigned long int pthread_t; typedef union { char __size[56]; long int __align; } pthread_attr_t; typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; # 76 "/usr/include/bits/pthreadtypes.h" 3 4 typedef union { struct __pthread_mutex_s { int __lock; unsigned int __count; int __owner; unsigned int __nusers; int __kind; int __spins; __pthread_list_t __list; # 101 "/usr/include/bits/pthreadtypes.h" 3 4 } __data; char __size[40]; long int __align; } pthread_mutex_t; typedef union { char __size[4]; int __align; } pthread_mutexattr_t; typedef union { struct { int __lock; unsigned int __futex; __extension__ unsigned long long int __total_seq; __extension__ unsigned long long int __wakeup_seq; __extension__ unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; __extension__ long long int __align; } pthread_cond_t; typedef union { char __size[4]; int __align; } pthread_condattr_t; typedef unsigned int pthread_key_t; typedef int pthread_once_t; typedef union { struct { int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; unsigned int __flags; } __data; # 187 "/usr/include/bits/pthreadtypes.h" 3 4 char __size[56]; long int __align; } pthread_rwlock_t; typedef union { char __size[8]; long int __align; } pthread_rwlockattr_t; typedef volatile int pthread_spinlock_t; typedef union { char __size[32]; long int __align; } pthread_barrier_t; typedef union { char __size[4]; int __align; } pthread_barrierattr_t; # 271 "/usr/include/sys/types.h" 2 3 4 # 3 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 Defined "HAVE_SYS_TYPES_H" to "1" ================================================================================ TEST check from config.headers(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: malloc.h sh: gcc -E -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c Executing: gcc -E -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c sh: # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" # 1 "" # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/confdefs.h" 1 # 2 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conffix.h" 1 # 3 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 # 1 "/usr/include/malloc.h" 1 3 4 # 24 "/usr/include/malloc.h" 3 4 # 1 "/usr/include/features.h" 1 3 4 # 347 "/usr/include/features.h" 3 4 # 1 "/usr/include/sys/cdefs.h" 1 3 4 # 353 "/usr/include/sys/cdefs.h" 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 354 "/usr/include/sys/cdefs.h" 2 3 4 # 348 "/usr/include/features.h" 2 3 4 # 371 "/usr/include/features.h" 3 4 # 1 "/usr/include/gnu/stubs.h" 1 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 5 "/usr/include/gnu/stubs.h" 2 3 4 # 1 "/usr/include/gnu/stubs-64.h" 1 3 4 # 10 "/usr/include/gnu/stubs.h" 2 3 4 # 372 "/usr/include/features.h" 2 3 4 # 25 "/usr/include/malloc.h" 2 3 4 # 1 "/opt/gcc/4.8.1/snos/lib/gcc/x86_64-suse-linux/4.8.1/include/stddef.h" 1 3 4 # 147 "/opt/gcc/4.8.1/snos/lib/gcc/x86_64-suse-linux/4.8.1/include/stddef.h" 3 4 typedef long int ptrdiff_t; # 212 "/opt/gcc/4.8.1/snos/lib/gcc/x86_64-suse-linux/4.8.1/include/stddef.h" 3 4 typedef long unsigned int size_t; # 324 "/opt/gcc/4.8.1/snos/lib/gcc/x86_64-suse-linux/4.8.1/include/stddef.h" 3 4 typedef int wchar_t; # 26 "/usr/include/malloc.h" 2 3 4 # 1 "/usr/include/stdio.h" 1 3 4 # 30 "/usr/include/stdio.h" 3 4 # 1 "/opt/gcc/4.8.1/snos/lib/gcc/x86_64-suse-linux/4.8.1/include/stddef.h" 1 3 4 # 35 "/usr/include/stdio.h" 2 3 4 # 1 "/usr/include/bits/types.h" 1 3 4 # 28 "/usr/include/bits/types.h" 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 29 "/usr/include/bits/types.h" 2 3 4 typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; # 131 "/usr/include/bits/types.h" 3 4 # 1 "/usr/include/bits/typesizes.h" 1 3 4 # 132 "/usr/include/bits/types.h" 2 3 4 typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned long int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef long int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; # 37 "/usr/include/stdio.h" 2 3 4 # 45 "/usr/include/stdio.h" 3 4 struct _IO_FILE; typedef struct _IO_FILE FILE; # 65 "/usr/include/stdio.h" 3 4 typedef struct _IO_FILE __FILE; # 75 "/usr/include/stdio.h" 3 4 # 1 "/usr/include/libio.h" 1 3 4 # 32 "/usr/include/libio.h" 3 4 # 1 "/usr/include/_G_config.h" 1 3 4 # 15 "/usr/include/_G_config.h" 3 4 # 1 "/opt/gcc/4.8.1/snos/lib/gcc/x86_64-suse-linux/4.8.1/include/stddef.h" 1 3 4 # 16 "/usr/include/_G_config.h" 2 3 4 # 1 "/usr/include/wchar.h" 1 3 4 # 83 "/usr/include/wchar.h" 3 4 typedef struct { int __count; union { unsigned int __wch; char __wchb[4]; } __value; } __mbstate_t; # 21 "/usr/include/_G_config.h" 2 3 4 typedef struct { __off_t __pos; __mbstate_t __state; } _G_fpos_t; typedef struct { __off64_t __pos; __mbstate_t __state; } _G_fpos64_t; # 53 "/usr/include/_G_config.h" 3 4 typedef int _G_int16_t __attribute__ ((__mode__ (__HI__))); typedef int _G_int32_t __attribute__ ((__mode__ (__SI__))); typedef unsigned int _G_uint16_t __attribute__ ((__mode__ (__HI__))); typedef unsigned int _G_uint32_t __attribute__ ((__mode__ (__SI__))); # 33 "/usr/include/libio.h" 2 3 4 # 53 "/usr/include/libio.h" 3 4 # 1 "/opt/gcc/4.8.1/snos/lib/gcc/x86_64-suse-linux/4.8.1/include/stdarg.h" 1 3 4 # 40 "/opt/gcc/4.8.1/snos/lib/gcc/x86_64-suse-linux/4.8.1/include/stdarg.h" 3 4 typedef __builtin_va_list __gnuc_va_list; # 54 "/usr/include/libio.h" 2 3 4 # 170 "/usr/include/libio.h" 3 4 struct _IO_jump_t; struct _IO_FILE; # 180 "/usr/include/libio.h" 3 4 typedef void _IO_lock_t; struct _IO_marker { struct _IO_marker *_next; struct _IO_FILE *_sbuf; int _pos; # 203 "/usr/include/libio.h" 3 4 }; enum __codecvt_result { __codecvt_ok, __codecvt_partial, __codecvt_error, __codecvt_noconv }; # 271 "/usr/include/libio.h" 3 4 struct _IO_FILE { int _flags; char* _IO_read_ptr; char* _IO_read_end; char* _IO_read_base; char* _IO_write_base; char* _IO_write_ptr; char* _IO_write_end; char* _IO_buf_base; char* _IO_buf_end; char *_IO_save_base; char *_IO_backup_base; char *_IO_save_end; struct _IO_marker *_markers; struct _IO_FILE *_chain; int _fileno; int _flags2; __off_t _old_offset; unsigned short _cur_column; signed char _vtable_offset; char _shortbuf[1]; _IO_lock_t *_lock; # 319 "/usr/include/libio.h" 3 4 __off64_t _offset; # 328 "/usr/include/libio.h" 3 4 void *__pad1; void *__pad2; void *__pad3; void *__pad4; size_t __pad5; int _mode; char _unused2[15 * sizeof (int) - 4 * sizeof (void *) - sizeof (size_t)]; }; typedef struct _IO_FILE _IO_FILE; struct _IO_FILE_plus; extern struct _IO_FILE_plus _IO_2_1_stdin_; extern struct _IO_FILE_plus _IO_2_1_stdout_; extern struct _IO_FILE_plus _IO_2_1_stderr_; # 364 "/usr/include/libio.h" 3 4 typedef __ssize_t __io_read_fn (void *__cookie, char *__buf, size_t __nbytes); typedef __ssize_t __io_write_fn (void *__cookie, __const char *__buf, size_t __n); typedef int __io_seek_fn (void *__cookie, __off64_t *__pos, int __w); typedef int __io_close_fn (void *__cookie); # 416 "/usr/include/libio.h" 3 4 extern int __underflow (_IO_FILE *); extern int __uflow (_IO_FILE *); extern int __overflow (_IO_FILE *, int); # 460 "/usr/include/libio.h" 3 4 extern int _IO_getc (_IO_FILE *__fp); extern int _IO_putc (int __c, _IO_FILE *__fp); extern int _IO_feof (_IO_FILE *__fp) __attribute__ ((__nothrow__)); extern int _IO_ferror (_IO_FILE *__fp) __attribute__ ((__nothrow__)); extern int _IO_peekc_locked (_IO_FILE *__fp); extern void _IO_flockfile (_IO_FILE *) __attribute__ ((__nothrow__)); extern void _IO_funlockfile (_IO_FILE *) __attribute__ ((__nothrow__)); extern int _IO_ftrylockfile (_IO_FILE *) __attribute__ ((__nothrow__)); # 490 "/usr/include/libio.h" 3 4 extern int _IO_vfscanf (_IO_FILE * __restrict, const char * __restrict, __gnuc_va_list, int *__restrict); extern int _IO_vfprintf (_IO_FILE *__restrict, const char *__restrict, __gnuc_va_list); extern __ssize_t _IO_padn (_IO_FILE *, int, __ssize_t); extern size_t _IO_sgetn (_IO_FILE *, void *, size_t); extern __off64_t _IO_seekoff (_IO_FILE *, __off64_t, int, int); extern __off64_t _IO_seekpos (_IO_FILE *, __off64_t, int); extern void _IO_free_backup_area (_IO_FILE *) __attribute__ ((__nothrow__)); # 76 "/usr/include/stdio.h" 2 3 4 # 89 "/usr/include/stdio.h" 3 4 typedef _G_fpos_t fpos_t; # 141 "/usr/include/stdio.h" 3 4 # 1 "/usr/include/bits/stdio_lim.h" 1 3 4 # 142 "/usr/include/stdio.h" 2 3 4 extern struct _IO_FILE *stdin; extern struct _IO_FILE *stdout; extern struct _IO_FILE *stderr; extern int remove (__const char *__filename) __attribute__ ((__nothrow__)); extern int rename (__const char *__old, __const char *__new) __attribute__ ((__nothrow__)); extern int renameat (int __oldfd, __const char *__old, int __newfd, __const char *__new) __attribute__ ((__nothrow__)); extern FILE *tmpfile (void) ; # 188 "/usr/include/stdio.h" 3 4 extern char *tmpnam (char *__s) __attribute__ ((__nothrow__)) ; extern char *tmpnam_r (char *__s) __attribute__ ((__nothrow__)) ; # 206 "/usr/include/stdio.h" 3 4 extern char *tempnam (__const char *__dir, __const char *__pfx) __attribute__ ((__nothrow__)) __attribute__ ((__malloc__)) ; extern int fclose (FILE *__stream); extern int fflush (FILE *__stream); # 231 "/usr/include/stdio.h" 3 4 extern int fflush_unlocked (FILE *__stream); # 245 "/usr/include/stdio.h" 3 4 extern FILE *fopen (__const char *__restrict __filename, __const char *__restrict __modes) ; extern FILE *freopen (__const char *__restrict __filename, __const char *__restrict __modes, FILE *__restrict __stream) ; # 274 "/usr/include/stdio.h" 3 4 # 285 "/usr/include/stdio.h" 3 4 extern FILE *fdopen (int __fd, __const char *__modes) __attribute__ ((__nothrow__)) ; # 298 "/usr/include/stdio.h" 3 4 extern FILE *fmemopen (void *__s, size_t __len, __const char *__modes) __attribute__ ((__nothrow__)) ; extern FILE *open_memstream (char **__bufloc, size_t *__sizeloc) __attribute__ ((__nothrow__)) ; extern void setbuf (FILE *__restrict __stream, char *__restrict __buf) __attribute__ ((__nothrow__)); extern int setvbuf (FILE *__restrict __stream, char *__restrict __buf, int __modes, size_t __n) __attribute__ ((__nothrow__)); extern void setbuffer (FILE *__restrict __stream, char *__restrict __buf, size_t __size) __attribute__ ((__nothrow__)); extern void setlinebuf (FILE *__stream) __attribute__ ((__nothrow__)); extern int fprintf (FILE *__restrict __stream, __const char *__restrict __format, ...); extern int printf (__const char *__restrict __format, ...); extern int sprintf (char *__restrict __s, __const char *__restrict __format, ...) __attribute__ ((__nothrow__)); extern int vfprintf (FILE *__restrict __s, __const char *__restrict __format, __gnuc_va_list __arg); extern int vprintf (__const char *__restrict __format, __gnuc_va_list __arg); extern int vsprintf (char *__restrict __s, __const char *__restrict __format, __gnuc_va_list __arg) __attribute__ ((__nothrow__)); extern int snprintf (char *__restrict __s, size_t __maxlen, __const char *__restrict __format, ...) __attribute__ ((__nothrow__)) __attribute__ ((__format__ (__printf__, 3, 4))); extern int vsnprintf (char *__restrict __s, size_t __maxlen, __const char *__restrict __format, __gnuc_va_list __arg) __attribute__ ((__nothrow__)) __attribute__ ((__format__ (__printf__, 3, 0))); # 396 "/usr/include/stdio.h" 3 4 extern int vdprintf (int __fd, __const char *__restrict __fmt, __gnuc_va_list __arg) __attribute__ ((__format__ (__printf__, 2, 0))); extern int dprintf (int __fd, __const char *__restrict __fmt, ...) __attribute__ ((__format__ (__printf__, 2, 3))); extern int fscanf (FILE *__restrict __stream, __const char *__restrict __format, ...) ; extern int scanf (__const char *__restrict __format, ...) ; extern int sscanf (__const char *__restrict __s, __const char *__restrict __format, ...) __attribute__ ((__nothrow__)); # 427 "/usr/include/stdio.h" 3 4 extern int fscanf (FILE *__restrict __stream, __const char *__restrict __format, ...) __asm__ ("" "__isoc99_fscanf") ; extern int scanf (__const char *__restrict __format, ...) __asm__ ("" "__isoc99_scanf") ; extern int sscanf (__const char *__restrict __s, __const char *__restrict __format, ...) __asm__ ("" "__isoc99_sscanf") __attribute__ ((__nothrow__)) ; # 447 "/usr/include/stdio.h" 3 4 extern int vfscanf (FILE *__restrict __s, __const char *__restrict __format, __gnuc_va_list __arg) __attribute__ ((__format__ (__scanf__, 2, 0))) ; extern int vscanf (__const char *__restrict __format, __gnuc_va_list __arg) __attribute__ ((__format__ (__scanf__, 1, 0))) ; extern int vsscanf (__const char *__restrict __s, __const char *__restrict __format, __gnuc_va_list __arg) __attribute__ ((__nothrow__)) __attribute__ ((__format__ (__scanf__, 2, 0))); # 478 "/usr/include/stdio.h" 3 4 extern int vfscanf (FILE *__restrict __s, __const char *__restrict __format, __gnuc_va_list __arg) __asm__ ("" "__isoc99_vfscanf") __attribute__ ((__format__ (__scanf__, 2, 0))) ; extern int vscanf (__const char *__restrict __format, __gnuc_va_list __arg) __asm__ ("" "__isoc99_vscanf") __attribute__ ((__format__ (__scanf__, 1, 0))) ; extern int vsscanf (__const char *__restrict __s, __const char *__restrict __format, __gnuc_va_list __arg) __asm__ ("" "__isoc99_vsscanf") __attribute__ ((__nothrow__)) __attribute__ ((__format__ (__scanf__, 2, 0))); # 506 "/usr/include/stdio.h" 3 4 extern int fgetc (FILE *__stream); extern int getc (FILE *__stream); extern int getchar (void); # 534 "/usr/include/stdio.h" 3 4 extern int getc_unlocked (FILE *__stream); extern int getchar_unlocked (void); # 545 "/usr/include/stdio.h" 3 4 extern int fgetc_unlocked (FILE *__stream); extern int fputc (int __c, FILE *__stream); extern int putc (int __c, FILE *__stream); extern int putchar (int __c); # 578 "/usr/include/stdio.h" 3 4 extern int fputc_unlocked (int __c, FILE *__stream); extern int putc_unlocked (int __c, FILE *__stream); extern int putchar_unlocked (int __c); extern int getw (FILE *__stream); extern int putw (int __w, FILE *__stream); extern char *fgets (char *__restrict __s, int __n, FILE *__restrict __stream) ; extern char *gets (char *__s) ; # 640 "/usr/include/stdio.h" 3 4 extern __ssize_t __getdelim (char **__restrict __lineptr, size_t *__restrict __n, int __delimiter, FILE *__restrict __stream) ; extern __ssize_t getdelim (char **__restrict __lineptr, size_t *__restrict __n, int __delimiter, FILE *__restrict __stream) ; extern __ssize_t getline (char **__restrict __lineptr, size_t *__restrict __n, FILE *__restrict __stream) ; extern int fputs (__const char *__restrict __s, FILE *__restrict __stream); extern int puts (__const char *__s); extern int ungetc (int __c, FILE *__stream); extern size_t fread (void *__restrict __ptr, size_t __size, size_t __n, FILE *__restrict __stream) ; extern size_t fwrite (__const void *__restrict __ptr, size_t __size, size_t __n, FILE *__restrict __s) ; # 712 "/usr/include/stdio.h" 3 4 extern size_t fread_unlocked (void *__restrict __ptr, size_t __size, size_t __n, FILE *__restrict __stream) ; extern size_t fwrite_unlocked (__const void *__restrict __ptr, size_t __size, size_t __n, FILE *__restrict __stream) ; extern int fseek (FILE *__stream, long int __off, int __whence); extern long int ftell (FILE *__stream) ; extern void rewind (FILE *__stream); # 748 "/usr/include/stdio.h" 3 4 extern int fseeko (FILE *__stream, __off_t __off, int __whence); extern __off_t ftello (FILE *__stream) ; # 767 "/usr/include/stdio.h" 3 4 extern int fgetpos (FILE *__restrict __stream, fpos_t *__restrict __pos); extern int fsetpos (FILE *__stream, __const fpos_t *__pos); # 790 "/usr/include/stdio.h" 3 4 # 799 "/usr/include/stdio.h" 3 4 extern void clearerr (FILE *__stream) __attribute__ ((__nothrow__)); extern int feof (FILE *__stream) __attribute__ ((__nothrow__)) ; extern int ferror (FILE *__stream) __attribute__ ((__nothrow__)) ; extern void clearerr_unlocked (FILE *__stream) __attribute__ ((__nothrow__)); extern int feof_unlocked (FILE *__stream) __attribute__ ((__nothrow__)) ; extern int ferror_unlocked (FILE *__stream) __attribute__ ((__nothrow__)) ; extern void perror (__const char *__s); # 1 "/usr/include/bits/sys_errlist.h" 1 3 4 # 27 "/usr/include/bits/sys_errlist.h" 3 4 extern int sys_nerr; extern __const char *__const sys_errlist[]; # 829 "/usr/include/stdio.h" 2 3 4 extern int fileno (FILE *__stream) __attribute__ ((__nothrow__)) ; extern int fileno_unlocked (FILE *__stream) __attribute__ ((__nothrow__)) ; # 848 "/usr/include/stdio.h" 3 4 extern FILE *popen (__const char *__command, __const char *__modes) ; extern int pclose (FILE *__stream); extern char *ctermid (char *__s) __attribute__ ((__nothrow__)); # 888 "/usr/include/stdio.h" 3 4 extern void flockfile (FILE *__stream) __attribute__ ((__nothrow__)); extern int ftrylockfile (FILE *__stream) __attribute__ ((__nothrow__)) ; extern void funlockfile (FILE *__stream) __attribute__ ((__nothrow__)); # 918 "/usr/include/stdio.h" 3 4 # 27 "/usr/include/malloc.h" 2 3 4 # 48 "/usr/include/malloc.h" 3 4 extern void *malloc (size_t __size) __attribute__ ((__nothrow__)) __attribute__ ((__malloc__)) ; extern void *calloc (size_t __nmemb, size_t __size) __attribute__ ((__nothrow__)) __attribute__ ((__malloc__)) ; extern void *realloc (void *__ptr, size_t __size) __attribute__ ((__nothrow__)) __attribute__ ((__warn_unused_result__)); extern void free (void *__ptr) __attribute__ ((__nothrow__)); extern void cfree (void *__ptr) __attribute__ ((__nothrow__)); extern void *memalign (size_t __alignment, size_t __size) __attribute__ ((__nothrow__)) __attribute__ ((__malloc__)) ; extern void *valloc (size_t __size) __attribute__ ((__nothrow__)) __attribute__ ((__malloc__)) ; extern void * pvalloc (size_t __size) __attribute__ ((__nothrow__)) __attribute__ ((__malloc__)) ; extern void *(*__morecore) (ptrdiff_t __size); extern void *__default_morecore (ptrdiff_t __size) __attribute__ ((__nothrow__)) __attribute__ ((__malloc__)); struct mallinfo { int arena; int ordblks; int smblks; int hblks; int hblkhd; int usmblks; int fsmblks; int uordblks; int fordblks; int keepcost; }; extern struct mallinfo mallinfo (void) __attribute__ ((__nothrow__)); # 135 "/usr/include/malloc.h" 3 4 extern int mallopt (int __param, int __val) __attribute__ ((__nothrow__)); extern int malloc_trim (size_t __pad) __attribute__ ((__nothrow__)); extern size_t malloc_usable_size (void *__ptr) __attribute__ ((__nothrow__)); extern void malloc_stats (void) __attribute__ ((__nothrow__)); extern int malloc_info (int __options, FILE *__fp); extern void *malloc_get_state (void) __attribute__ ((__nothrow__)); extern int malloc_set_state (void *__ptr) __attribute__ ((__nothrow__)); extern void (*__malloc_initialize_hook) (void); extern void (*__free_hook) (void *__ptr, __const void *) ; extern void *(*__malloc_hook) (size_t __size, __const void *) ; extern void *(*__realloc_hook) (void *__ptr, size_t __size, __const void *) ; extern void *(*__memalign_hook) (size_t __alignment, size_t __size, __const void *) ; extern void (*__after_morecore_hook) (void); extern void __malloc_check_init (void) __attribute__ ((__nothrow__)); # 3 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 Defined "HAVE_MALLOC_H" to "1" ================================================================================ TEST check from config.headers(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: time.h sh: gcc -E -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c Executing: gcc -E -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c sh: # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" # 1 "" # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/confdefs.h" 1 # 2 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conffix.h" 1 # 3 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 # 1 "/usr/include/time.h" 1 3 4 # 28 "/usr/include/time.h" 3 4 # 1 "/usr/include/features.h" 1 3 4 # 347 "/usr/include/features.h" 3 4 # 1 "/usr/include/sys/cdefs.h" 1 3 4 # 353 "/usr/include/sys/cdefs.h" 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 354 "/usr/include/sys/cdefs.h" 2 3 4 # 348 "/usr/include/features.h" 2 3 4 # 371 "/usr/include/features.h" 3 4 # 1 "/usr/include/gnu/stubs.h" 1 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 5 "/usr/include/gnu/stubs.h" 2 3 4 # 1 "/usr/include/gnu/stubs-64.h" 1 3 4 # 10 "/usr/include/gnu/stubs.h" 2 3 4 # 372 "/usr/include/features.h" 2 3 4 # 29 "/usr/include/time.h" 2 3 4 # 1 "/opt/gcc/4.8.1/snos/lib/gcc/x86_64-suse-linux/4.8.1/include/stddef.h" 1 3 4 # 212 "/opt/gcc/4.8.1/snos/lib/gcc/x86_64-suse-linux/4.8.1/include/stddef.h" 3 4 typedef long unsigned int size_t; # 39 "/usr/include/time.h" 2 3 4 # 1 "/usr/include/bits/time.h" 1 3 4 # 43 "/usr/include/time.h" 2 3 4 # 56 "/usr/include/time.h" 3 4 # 1 "/usr/include/bits/types.h" 1 3 4 # 28 "/usr/include/bits/types.h" 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 29 "/usr/include/bits/types.h" 2 3 4 typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; # 131 "/usr/include/bits/types.h" 3 4 # 1 "/usr/include/bits/typesizes.h" 1 3 4 # 132 "/usr/include/bits/types.h" 2 3 4 typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned long int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef long int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; # 57 "/usr/include/time.h" 2 3 4 typedef __clock_t clock_t; # 74 "/usr/include/time.h" 3 4 typedef __time_t time_t; # 92 "/usr/include/time.h" 3 4 typedef __clockid_t clockid_t; # 104 "/usr/include/time.h" 3 4 typedef __timer_t timer_t; # 120 "/usr/include/time.h" 3 4 struct timespec { __time_t tv_sec; long int tv_nsec; }; struct tm { int tm_sec; int tm_min; int tm_hour; int tm_mday; int tm_mon; int tm_year; int tm_wday; int tm_yday; int tm_isdst; long int tm_gmtoff; __const char *tm_zone; }; struct itimerspec { struct timespec it_interval; struct timespec it_value; }; struct sigevent; typedef __pid_t pid_t; extern clock_t clock (void) __attribute__ ((__nothrow__)); extern time_t time (time_t *__timer) __attribute__ ((__nothrow__)); extern double difftime (time_t __time1, time_t __time0) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern time_t mktime (struct tm *__tp) __attribute__ ((__nothrow__)); extern size_t strftime (char *__restrict __s, size_t __maxsize, __const char *__restrict __format, __const struct tm *__restrict __tp) __attribute__ ((__nothrow__)); # 215 "/usr/include/time.h" 3 4 # 1 "/usr/include/xlocale.h" 1 3 4 # 28 "/usr/include/xlocale.h" 3 4 typedef struct __locale_struct { struct locale_data *__locales[13]; const unsigned short int *__ctype_b; const int *__ctype_tolower; const int *__ctype_toupper; const char *__names[13]; } *__locale_t; typedef __locale_t locale_t; # 216 "/usr/include/time.h" 2 3 4 extern size_t strftime_l (char *__restrict __s, size_t __maxsize, __const char *__restrict __format, __const struct tm *__restrict __tp, __locale_t __loc) __attribute__ ((__nothrow__)); # 230 "/usr/include/time.h" 3 4 extern struct tm *gmtime (__const time_t *__timer) __attribute__ ((__nothrow__)); extern struct tm *localtime (__const time_t *__timer) __attribute__ ((__nothrow__)); extern struct tm *gmtime_r (__const time_t *__restrict __timer, struct tm *__restrict __tp) __attribute__ ((__nothrow__)); extern struct tm *localtime_r (__const time_t *__restrict __timer, struct tm *__restrict __tp) __attribute__ ((__nothrow__)); extern char *asctime (__const struct tm *__tp) __attribute__ ((__nothrow__)); extern char *ctime (__const time_t *__timer) __attribute__ ((__nothrow__)); extern char *asctime_r (__const struct tm *__restrict __tp, char *__restrict __buf) __attribute__ ((__nothrow__)); extern char *ctime_r (__const time_t *__restrict __timer, char *__restrict __buf) __attribute__ ((__nothrow__)); extern char *__tzname[2]; extern int __daylight; extern long int __timezone; extern char *tzname[2]; extern void tzset (void) __attribute__ ((__nothrow__)); extern int daylight; extern long int timezone; extern int stime (__const time_t *__when) __attribute__ ((__nothrow__)); # 313 "/usr/include/time.h" 3 4 extern time_t timegm (struct tm *__tp) __attribute__ ((__nothrow__)); extern time_t timelocal (struct tm *__tp) __attribute__ ((__nothrow__)); extern int dysize (int __year) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); # 328 "/usr/include/time.h" 3 4 extern int nanosleep (__const struct timespec *__requested_time, struct timespec *__remaining); extern int clock_getres (clockid_t __clock_id, struct timespec *__res) __attribute__ ((__nothrow__)); extern int clock_gettime (clockid_t __clock_id, struct timespec *__tp) __attribute__ ((__nothrow__)); extern int clock_settime (clockid_t __clock_id, __const struct timespec *__tp) __attribute__ ((__nothrow__)); extern int clock_nanosleep (clockid_t __clock_id, int __flags, __const struct timespec *__req, struct timespec *__rem); extern int clock_getcpuclockid (pid_t __pid, clockid_t *__clock_id) __attribute__ ((__nothrow__)); extern int timer_create (clockid_t __clock_id, struct sigevent *__restrict __evp, timer_t *__restrict __timerid) __attribute__ ((__nothrow__)); extern int timer_delete (timer_t __timerid) __attribute__ ((__nothrow__)); extern int timer_settime (timer_t __timerid, int __flags, __const struct itimerspec *__restrict __value, struct itimerspec *__restrict __ovalue) __attribute__ ((__nothrow__)); extern int timer_gettime (timer_t __timerid, struct itimerspec *__value) __attribute__ ((__nothrow__)); extern int timer_getoverrun (timer_t __timerid) __attribute__ ((__nothrow__)); # 417 "/usr/include/time.h" 3 4 # 3 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 Defined "HAVE_TIME_H" to "1" ================================================================================ TEST check from config.headers(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: Direct.h sh: gcc -E -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c Executing: gcc -E -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c sh: # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" # 1 "" # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/confdefs.h" 1 # 2 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conffix.h" 1 # 3 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 Possible ERROR while running preprocessor: /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c:3:20: fatal error: Direct.h: No such file or directory #include ^ compilation terminated. ret = 256 error message = {/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c:3:20: fatal error: Direct.h: No such file or directory #include ^ compilation terminated. } Source: #include "confdefs.h" #include "conffix.h" #include ================================================================================ TEST check from config.headers(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: Ws2tcpip.h sh: gcc -E -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c Executing: gcc -E -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c sh: # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" # 1 "" # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/confdefs.h" 1 # 2 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conffix.h" 1 # 3 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 Possible ERROR while running preprocessor: /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c:3:22: fatal error: Ws2tcpip.h: No such file or directory #include ^ compilation terminated. ret = 256 error message = {/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c:3:22: fatal error: Ws2tcpip.h: No such file or directory #include ^ compilation terminated. } Source: #include "confdefs.h" #include "conffix.h" #include ================================================================================ TEST check from config.headers(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: endian.h sh: gcc -E -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c Executing: gcc -E -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c sh: # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" # 1 "" # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/confdefs.h" 1 # 2 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conffix.h" 1 # 3 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 # 1 "/usr/include/endian.h" 1 3 4 # 22 "/usr/include/endian.h" 3 4 # 1 "/usr/include/features.h" 1 3 4 # 347 "/usr/include/features.h" 3 4 # 1 "/usr/include/sys/cdefs.h" 1 3 4 # 353 "/usr/include/sys/cdefs.h" 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 354 "/usr/include/sys/cdefs.h" 2 3 4 # 348 "/usr/include/features.h" 2 3 4 # 371 "/usr/include/features.h" 3 4 # 1 "/usr/include/gnu/stubs.h" 1 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 5 "/usr/include/gnu/stubs.h" 2 3 4 # 1 "/usr/include/gnu/stubs-64.h" 1 3 4 # 10 "/usr/include/gnu/stubs.h" 2 3 4 # 372 "/usr/include/features.h" 2 3 4 # 23 "/usr/include/endian.h" 2 3 4 # 37 "/usr/include/endian.h" 3 4 # 1 "/usr/include/bits/endian.h" 1 3 4 # 38 "/usr/include/endian.h" 2 3 4 # 61 "/usr/include/endian.h" 3 4 # 1 "/usr/include/bits/byteswap.h" 1 3 4 # 28 "/usr/include/bits/byteswap.h" 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 29 "/usr/include/bits/byteswap.h" 2 3 4 # 62 "/usr/include/endian.h" 2 3 4 # 3 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 Defined "HAVE_ENDIAN_H" to "1" ================================================================================ TEST check from config.headers(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: ieeefp.h sh: gcc -E -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c Executing: gcc -E -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c sh: # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" # 1 "" # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/confdefs.h" 1 # 2 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conffix.h" 1 # 3 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 Possible ERROR while running preprocessor: /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c:3:20: fatal error: ieeefp.h: No such file or directory #include ^ compilation terminated. ret = 256 error message = {/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c:3:20: fatal error: ieeefp.h: No such file or directory #include ^ compilation terminated. } Source: #include "confdefs.h" #include "conffix.h" #include ================================================================================ TEST check from config.headers(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: strings.h sh: gcc -E -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c Executing: gcc -E -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c sh: # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" # 1 "" # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/confdefs.h" 1 # 2 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conffix.h" 1 # 3 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 # 1 "/usr/include/strings.h" 1 3 4 # 27 "/usr/include/strings.h" 3 4 # 1 "/usr/include/features.h" 1 3 4 # 347 "/usr/include/features.h" 3 4 # 1 "/usr/include/sys/cdefs.h" 1 3 4 # 353 "/usr/include/sys/cdefs.h" 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 354 "/usr/include/sys/cdefs.h" 2 3 4 # 348 "/usr/include/features.h" 2 3 4 # 371 "/usr/include/features.h" 3 4 # 1 "/usr/include/gnu/stubs.h" 1 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 5 "/usr/include/gnu/stubs.h" 2 3 4 # 1 "/usr/include/gnu/stubs-64.h" 1 3 4 # 10 "/usr/include/gnu/stubs.h" 2 3 4 # 372 "/usr/include/features.h" 2 3 4 # 28 "/usr/include/strings.h" 2 3 4 # 1 "/opt/gcc/4.8.1/snos/lib/gcc/x86_64-suse-linux/4.8.1/include/stddef.h" 1 3 4 # 212 "/opt/gcc/4.8.1/snos/lib/gcc/x86_64-suse-linux/4.8.1/include/stddef.h" 3 4 typedef long unsigned int size_t; # 30 "/usr/include/strings.h" 2 3 4 extern int bcmp (__const void *__s1, __const void *__s2, size_t __n) __attribute__ ((__nothrow__)) __attribute__ ((__pure__)); extern void bcopy (__const void *__src, void *__dest, size_t __n) __attribute__ ((__nothrow__)); extern void bzero (void *__s, size_t __n) __attribute__ ((__nothrow__)); extern int ffs (int __i) __attribute__ ((__nothrow__)) __attribute__ ((const)); # 76 "/usr/include/strings.h" 3 4 extern char *index (__const char *__s, int __c) __attribute__ ((__nothrow__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1))); # 104 "/usr/include/strings.h" 3 4 extern char *rindex (__const char *__s, int __c) __attribute__ ((__nothrow__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1))); extern int strcasecmp (__const char *__s1, __const char *__s2) __attribute__ ((__nothrow__)) __attribute__ ((__pure__)); extern int strncasecmp (__const char *__s1, __const char *__s2, size_t __n) __attribute__ ((__nothrow__)) __attribute__ ((__pure__)); # 1 "/usr/include/xlocale.h" 1 3 4 # 28 "/usr/include/xlocale.h" 3 4 typedef struct __locale_struct { struct locale_data *__locales[13]; const unsigned short int *__ctype_b; const int *__ctype_tolower; const int *__ctype_toupper; const char *__names[13]; } *__locale_t; typedef __locale_t locale_t; # 121 "/usr/include/strings.h" 2 3 4 extern int strcasecmp_l (__const char *__s1, __const char *__s2, __locale_t __loc) __attribute__ ((__nothrow__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1, 2, 3))); extern int strncasecmp_l (__const char *__s1, __const char *__s2, size_t __n, __locale_t __loc) __attribute__ ((__nothrow__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1, 2, 4))); # 3 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 Defined "HAVE_STRINGS_H" to "1" ================================================================================ TEST check from config.headers(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sched.h sh: gcc -E -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c Executing: gcc -E -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c sh: # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" # 1 "" # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/confdefs.h" 1 # 2 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conffix.h" 1 # 3 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 # 1 "/usr/include/sched.h" 1 3 4 # 23 "/usr/include/sched.h" 3 4 # 1 "/usr/include/features.h" 1 3 4 # 347 "/usr/include/features.h" 3 4 # 1 "/usr/include/sys/cdefs.h" 1 3 4 # 353 "/usr/include/sys/cdefs.h" 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 354 "/usr/include/sys/cdefs.h" 2 3 4 # 348 "/usr/include/features.h" 2 3 4 # 371 "/usr/include/features.h" 3 4 # 1 "/usr/include/gnu/stubs.h" 1 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 5 "/usr/include/gnu/stubs.h" 2 3 4 # 1 "/usr/include/gnu/stubs-64.h" 1 3 4 # 10 "/usr/include/gnu/stubs.h" 2 3 4 # 372 "/usr/include/features.h" 2 3 4 # 24 "/usr/include/sched.h" 2 3 4 # 1 "/usr/include/bits/types.h" 1 3 4 # 28 "/usr/include/bits/types.h" 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 29 "/usr/include/bits/types.h" 2 3 4 typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; # 131 "/usr/include/bits/types.h" 3 4 # 1 "/usr/include/bits/typesizes.h" 1 3 4 # 132 "/usr/include/bits/types.h" 2 3 4 typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned long int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef long int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; # 27 "/usr/include/sched.h" 2 3 4 # 1 "/opt/gcc/4.8.1/snos/lib/gcc/x86_64-suse-linux/4.8.1/include/stddef.h" 1 3 4 # 212 "/opt/gcc/4.8.1/snos/lib/gcc/x86_64-suse-linux/4.8.1/include/stddef.h" 3 4 typedef long unsigned int size_t; # 30 "/usr/include/sched.h" 2 3 4 # 1 "/usr/include/time.h" 1 3 4 # 120 "/usr/include/time.h" 3 4 struct timespec { __time_t tv_sec; long int tv_nsec; }; # 33 "/usr/include/sched.h" 2 3 4 # 1 "/usr/include/bits/sched.h" 1 3 4 # 71 "/usr/include/bits/sched.h" 3 4 struct sched_param { int __sched_priority; }; extern int clone (int (*__fn) (void *__arg), void *__child_stack, int __flags, void *__arg, ...) __attribute__ ((__nothrow__)); extern int unshare (int __flags) __attribute__ ((__nothrow__)); extern int sched_getcpu (void) __attribute__ ((__nothrow__)); struct __sched_param { int __sched_priority; }; # 113 "/usr/include/bits/sched.h" 3 4 typedef unsigned long int __cpu_mask; typedef struct { __cpu_mask __bits[4096 / (8 * sizeof (__cpu_mask))]; } cpu_set_t; # 196 "/usr/include/bits/sched.h" 3 4 extern int __sched_cpucount (size_t __setsize, const cpu_set_t *__setp) __attribute__ ((__nothrow__)); extern cpu_set_t *__sched_cpualloc (size_t __count) __attribute__ ((__nothrow__)) ; extern void __sched_cpufree (cpu_set_t *__set) __attribute__ ((__nothrow__)); # 36 "/usr/include/sched.h" 2 3 4 extern int sched_setparam (__pid_t __pid, __const struct sched_param *__param) __attribute__ ((__nothrow__)); extern int sched_getparam (__pid_t __pid, struct sched_param *__param) __attribute__ ((__nothrow__)); extern int sched_setscheduler (__pid_t __pid, int __policy, __const struct sched_param *__param) __attribute__ ((__nothrow__)); extern int sched_getscheduler (__pid_t __pid) __attribute__ ((__nothrow__)); extern int sched_yield (void) __attribute__ ((__nothrow__)); extern int sched_get_priority_max (int __algorithm) __attribute__ ((__nothrow__)); extern int sched_get_priority_min (int __algorithm) __attribute__ ((__nothrow__)); extern int sched_rr_get_interval (__pid_t __pid, struct timespec *__t) __attribute__ ((__nothrow__)); # 118 "/usr/include/sched.h" 3 4 # 3 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 Defined "HAVE_SCHED_H" to "1" ================================================================================ TEST check from config.headers(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: cxxabi.h sh: gcc -E -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c Executing: gcc -E -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c sh: # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" # 1 "" # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/confdefs.h" 1 # 2 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conffix.h" 1 # 3 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 Possible ERROR while running preprocessor: /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c:3:20: fatal error: cxxabi.h: No such file or directory #include ^ compilation terminated. ret = 256 error message = {/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c:3:20: fatal error: cxxabi.h: No such file or directory #include ^ compilation terminated. } Source: #include "confdefs.h" #include "conffix.h" #include ================================================================================ TEST check from config.headers(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/systeminfo.h sh: gcc -E -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c Executing: gcc -E -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c sh: # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" # 1 "" # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/confdefs.h" 1 # 2 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conffix.h" 1 # 3 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 Possible ERROR while running preprocessor: /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c:3:28: fatal error: sys/systeminfo.h: No such file or directory #include ^ compilation terminated. ret = 256 error message = {/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c:3:28: fatal error: sys/systeminfo.h: No such file or directory #include ^ compilation terminated. } Source: #include "confdefs.h" #include "conffix.h" #include ================================================================================ TEST check from config.headers(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: dos.h sh: gcc -E -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c Executing: gcc -E -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c sh: # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" # 1 "" # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/confdefs.h" 1 # 2 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conffix.h" 1 # 3 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 Possible ERROR while running preprocessor: /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c:3:17: fatal error: dos.h: No such file or directory #include ^ compilation terminated. ret = 256 error message = {/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c:3:17: fatal error: dos.h: No such file or directory #include ^ compilation terminated. } Source: #include "confdefs.h" #include "conffix.h" #include ================================================================================ TEST check from config.headers(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: WindowsX.h sh: gcc -E -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c Executing: gcc -E -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c sh: # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" # 1 "" # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/confdefs.h" 1 # 2 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conffix.h" 1 # 3 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 Possible ERROR while running preprocessor: /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c:3:22: fatal error: WindowsX.h: No such file or directory #include ^ compilation terminated. ret = 256 error message = {/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c:3:22: fatal error: WindowsX.h: No such file or directory #include ^ compilation terminated. } Source: #include "confdefs.h" #include "conffix.h" #include ================================================================================ TEST check from config.headers(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/sysinfo.h sh: gcc -E -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c Executing: gcc -E -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c sh: # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" # 1 "" # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/confdefs.h" 1 # 2 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conffix.h" 1 # 3 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 # 1 "/usr/include/sys/sysinfo.h" 1 3 4 # 22 "/usr/include/sys/sysinfo.h" 3 4 # 1 "/usr/include/features.h" 1 3 4 # 347 "/usr/include/features.h" 3 4 # 1 "/usr/include/sys/cdefs.h" 1 3 4 # 353 "/usr/include/sys/cdefs.h" 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 354 "/usr/include/sys/cdefs.h" 2 3 4 # 348 "/usr/include/features.h" 2 3 4 # 371 "/usr/include/features.h" 3 4 # 1 "/usr/include/gnu/stubs.h" 1 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 5 "/usr/include/gnu/stubs.h" 2 3 4 # 1 "/usr/include/gnu/stubs-64.h" 1 3 4 # 10 "/usr/include/gnu/stubs.h" 2 3 4 # 372 "/usr/include/features.h" 2 3 4 # 23 "/usr/include/sys/sysinfo.h" 2 3 4 # 1 "/usr/include/linux/kernel.h" 1 3 4 # 11 "/usr/include/linux/kernel.h" 3 4 struct sysinfo { long uptime; unsigned long loads[3]; unsigned long totalram; unsigned long freeram; unsigned long sharedram; unsigned long bufferram; unsigned long totalswap; unsigned long freeswap; unsigned short procs; unsigned short pad; unsigned long totalhigh; unsigned long freehigh; unsigned int mem_unit; char _f[20-2*sizeof(long)-sizeof(int)]; }; # 26 "/usr/include/sys/sysinfo.h" 2 3 4 extern int sysinfo (struct sysinfo *__info) __attribute__ ((__nothrow__)); extern int get_nprocs_conf (void) __attribute__ ((__nothrow__)); extern int get_nprocs (void) __attribute__ ((__nothrow__)); extern long int get_phys_pages (void) __attribute__ ((__nothrow__)); extern long int get_avphys_pages (void) __attribute__ ((__nothrow__)); # 3 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 Defined "HAVE_SYS_SYSINFO_H" to "1" ================================================================================ TEST check from config.headers(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/wait.h sh: gcc -E -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c Executing: gcc -E -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c sh: # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" # 1 "" # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/confdefs.h" 1 # 2 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conffix.h" 1 # 3 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 # 1 "/usr/include/sys/wait.h" 1 3 4 # 27 "/usr/include/sys/wait.h" 3 4 # 1 "/usr/include/features.h" 1 3 4 # 347 "/usr/include/features.h" 3 4 # 1 "/usr/include/sys/cdefs.h" 1 3 4 # 353 "/usr/include/sys/cdefs.h" 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 354 "/usr/include/sys/cdefs.h" 2 3 4 # 348 "/usr/include/features.h" 2 3 4 # 371 "/usr/include/features.h" 3 4 # 1 "/usr/include/gnu/stubs.h" 1 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 5 "/usr/include/gnu/stubs.h" 2 3 4 # 1 "/usr/include/gnu/stubs-64.h" 1 3 4 # 10 "/usr/include/gnu/stubs.h" 2 3 4 # 372 "/usr/include/features.h" 2 3 4 # 28 "/usr/include/sys/wait.h" 2 3 4 # 1 "/usr/include/signal.h" 1 3 4 # 31 "/usr/include/signal.h" 3 4 # 1 "/usr/include/bits/sigset.h" 1 3 4 # 24 "/usr/include/bits/sigset.h" 3 4 typedef int __sig_atomic_t; typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; # 104 "/usr/include/bits/sigset.h" 3 4 extern int __sigismember (__const __sigset_t *, int); extern int __sigaddset (__sigset_t *, int); extern int __sigdelset (__sigset_t *, int); # 34 "/usr/include/signal.h" 2 3 4 typedef __sig_atomic_t sig_atomic_t; typedef __sigset_t sigset_t; # 1 "/usr/include/bits/types.h" 1 3 4 # 28 "/usr/include/bits/types.h" 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 29 "/usr/include/bits/types.h" 2 3 4 typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; # 131 "/usr/include/bits/types.h" 3 4 # 1 "/usr/include/bits/typesizes.h" 1 3 4 # 132 "/usr/include/bits/types.h" 2 3 4 typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned long int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef long int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; # 58 "/usr/include/signal.h" 2 3 4 # 1 "/usr/include/bits/signum.h" 1 3 4 # 59 "/usr/include/signal.h" 2 3 4 typedef __pid_t pid_t; typedef __uid_t uid_t; # 1 "/usr/include/time.h" 1 3 4 # 120 "/usr/include/time.h" 3 4 struct timespec { __time_t tv_sec; long int tv_nsec; }; # 77 "/usr/include/signal.h" 2 3 4 # 1 "/usr/include/bits/siginfo.h" 1 3 4 # 25 "/usr/include/bits/siginfo.h" 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 26 "/usr/include/bits/siginfo.h" 2 3 4 typedef union sigval { int sival_int; void *sival_ptr; } sigval_t; # 51 "/usr/include/bits/siginfo.h" 3 4 typedef struct siginfo { int si_signo; int si_errno; int si_code; union { int _pad[((128 / sizeof (int)) - 4)]; struct { __pid_t si_pid; __uid_t si_uid; } _kill; struct { int si_tid; int si_overrun; sigval_t si_sigval; } _timer; struct { __pid_t si_pid; __uid_t si_uid; sigval_t si_sigval; } _rt; struct { __pid_t si_pid; __uid_t si_uid; int si_status; __clock_t si_utime; __clock_t si_stime; } _sigchld; struct { void *si_addr; } _sigfault; struct { long int si_band; int si_fd; } _sigpoll; } _sifields; } siginfo_t; # 129 "/usr/include/bits/siginfo.h" 3 4 enum { SI_ASYNCNL = -60, SI_TKILL = -6, SI_SIGIO, SI_ASYNCIO, SI_MESGQ, SI_TIMER, SI_QUEUE, SI_USER, SI_KERNEL = 0x80 }; enum { ILL_ILLOPC = 1, ILL_ILLOPN, ILL_ILLADR, ILL_ILLTRP, ILL_PRVOPC, ILL_PRVREG, ILL_COPROC, ILL_BADSTK }; enum { FPE_INTDIV = 1, FPE_INTOVF, FPE_FLTDIV, FPE_FLTOVF, FPE_FLTUND, FPE_FLTRES, FPE_FLTINV, FPE_FLTSUB }; enum { SEGV_MAPERR = 1, SEGV_ACCERR }; enum { BUS_ADRALN = 1, BUS_ADRERR, BUS_OBJERR }; enum { TRAP_BRKPT = 1, TRAP_TRACE }; enum { CLD_EXITED = 1, CLD_KILLED, CLD_DUMPED, CLD_TRAPPED, CLD_STOPPED, CLD_CONTINUED }; enum { POLL_IN = 1, POLL_OUT, POLL_MSG, POLL_ERR, POLL_PRI, POLL_HUP }; # 273 "/usr/include/bits/siginfo.h" 3 4 typedef struct sigevent { sigval_t sigev_value; int sigev_signo; int sigev_notify; union { int _pad[((64 / sizeof (int)) - 4)]; __pid_t _tid; struct { void (*_function) (sigval_t); void *_attribute; } _sigev_thread; } _sigev_un; } sigevent_t; enum { SIGEV_SIGNAL = 0, SIGEV_NONE, SIGEV_THREAD, SIGEV_THREAD_ID = 4 }; # 80 "/usr/include/signal.h" 2 3 4 typedef void (*__sighandler_t) (int); extern __sighandler_t __sysv_signal (int __sig, __sighandler_t __handler) __attribute__ ((__nothrow__)); # 99 "/usr/include/signal.h" 3 4 extern __sighandler_t signal (int __sig, __sighandler_t __handler) __attribute__ ((__nothrow__)); # 113 "/usr/include/signal.h" 3 4 # 126 "/usr/include/signal.h" 3 4 extern int kill (__pid_t __pid, int __sig) __attribute__ ((__nothrow__)); extern int killpg (__pid_t __pgrp, int __sig) __attribute__ ((__nothrow__)); extern int raise (int __sig) __attribute__ ((__nothrow__)); extern __sighandler_t ssignal (int __sig, __sighandler_t __handler) __attribute__ ((__nothrow__)); extern int gsignal (int __sig) __attribute__ ((__nothrow__)); extern void psignal (int __sig, __const char *__s); extern void psiginfo (__const siginfo_t *__pinfo, __const char *__s); # 168 "/usr/include/signal.h" 3 4 extern int __sigpause (int __sig_or_mask, int __is_sig); # 196 "/usr/include/signal.h" 3 4 extern int sigblock (int __mask) __attribute__ ((__nothrow__)) __attribute__ ((__deprecated__)); extern int sigsetmask (int __mask) __attribute__ ((__nothrow__)) __attribute__ ((__deprecated__)); extern int siggetmask (void) __attribute__ ((__nothrow__)) __attribute__ ((__deprecated__)); # 216 "/usr/include/signal.h" 3 4 typedef __sighandler_t sig_t; extern int sigemptyset (sigset_t *__set) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int sigfillset (sigset_t *__set) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int sigaddset (sigset_t *__set, int __signo) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int sigdelset (sigset_t *__set, int __signo) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int sigismember (__const sigset_t *__set, int __signo) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); # 252 "/usr/include/signal.h" 3 4 # 1 "/usr/include/bits/sigaction.h" 1 3 4 # 25 "/usr/include/bits/sigaction.h" 3 4 struct sigaction { union { __sighandler_t sa_handler; void (*sa_sigaction) (int, siginfo_t *, void *); } __sigaction_handler; __sigset_t sa_mask; int sa_flags; void (*sa_restorer) (void); }; # 253 "/usr/include/signal.h" 2 3 4 extern int sigprocmask (int __how, __const sigset_t *__restrict __set, sigset_t *__restrict __oset) __attribute__ ((__nothrow__)); extern int sigsuspend (__const sigset_t *__set) __attribute__ ((__nonnull__ (1))); extern int sigaction (int __sig, __const struct sigaction *__restrict __act, struct sigaction *__restrict __oact) __attribute__ ((__nothrow__)); extern int sigpending (sigset_t *__set) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int sigwait (__const sigset_t *__restrict __set, int *__restrict __sig) __attribute__ ((__nonnull__ (1, 2))); extern int sigwaitinfo (__const sigset_t *__restrict __set, siginfo_t *__restrict __info) __attribute__ ((__nonnull__ (1))); extern int sigtimedwait (__const sigset_t *__restrict __set, siginfo_t *__restrict __info, __const struct timespec *__restrict __timeout) __attribute__ ((__nonnull__ (1))); extern int sigqueue (__pid_t __pid, int __sig, __const union sigval __val) __attribute__ ((__nothrow__)); # 310 "/usr/include/signal.h" 3 4 extern __const char *__const _sys_siglist[65]; extern __const char *__const sys_siglist[65]; struct sigvec { __sighandler_t sv_handler; int sv_mask; int sv_flags; }; # 334 "/usr/include/signal.h" 3 4 extern int sigvec (int __sig, __const struct sigvec *__vec, struct sigvec *__ovec) __attribute__ ((__nothrow__)); # 1 "/usr/include/bits/sigcontext.h" 1 3 4 # 26 "/usr/include/bits/sigcontext.h" 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 27 "/usr/include/bits/sigcontext.h" 2 3 4 struct _fpreg { unsigned short significand[4]; unsigned short exponent; }; struct _fpxreg { unsigned short significand[4]; unsigned short exponent; unsigned short padding[3]; }; struct _xmmreg { __uint32_t element[4]; }; # 109 "/usr/include/bits/sigcontext.h" 3 4 struct _fpstate { __uint16_t cwd; __uint16_t swd; __uint16_t ftw; __uint16_t fop; __uint64_t rip; __uint64_t rdp; __uint32_t mxcsr; __uint32_t mxcr_mask; struct _fpxreg _st[8]; struct _xmmreg _xmm[16]; __uint32_t padding[24]; }; struct sigcontext { unsigned long r8; unsigned long r9; unsigned long r10; unsigned long r11; unsigned long r12; unsigned long r13; unsigned long r14; unsigned long r15; unsigned long rdi; unsigned long rsi; unsigned long rbp; unsigned long rbx; unsigned long rdx; unsigned long rax; unsigned long rcx; unsigned long rsp; unsigned long rip; unsigned long eflags; unsigned short cs; unsigned short gs; unsigned short fs; unsigned short __pad0; unsigned long err; unsigned long trapno; unsigned long oldmask; unsigned long cr2; struct _fpstate * fpstate; unsigned long __reserved1 [8]; }; # 340 "/usr/include/signal.h" 2 3 4 extern int sigreturn (struct sigcontext *__scp) __attribute__ ((__nothrow__)); # 1 "/opt/gcc/4.8.1/snos/lib/gcc/x86_64-suse-linux/4.8.1/include/stddef.h" 1 3 4 # 212 "/opt/gcc/4.8.1/snos/lib/gcc/x86_64-suse-linux/4.8.1/include/stddef.h" 3 4 typedef long unsigned int size_t; # 350 "/usr/include/signal.h" 2 3 4 extern int siginterrupt (int __sig, int __interrupt) __attribute__ ((__nothrow__)); # 1 "/usr/include/bits/sigstack.h" 1 3 4 # 26 "/usr/include/bits/sigstack.h" 3 4 struct sigstack { void *ss_sp; int ss_onstack; }; enum { SS_ONSTACK = 1, SS_DISABLE }; # 50 "/usr/include/bits/sigstack.h" 3 4 typedef struct sigaltstack { void *ss_sp; int ss_flags; size_t ss_size; } stack_t; # 357 "/usr/include/signal.h" 2 3 4 # 365 "/usr/include/signal.h" 3 4 extern int sigstack (struct sigstack *__ss, struct sigstack *__oss) __attribute__ ((__nothrow__)) __attribute__ ((__deprecated__)); extern int sigaltstack (__const struct sigaltstack *__restrict __ss, struct sigaltstack *__restrict __oss) __attribute__ ((__nothrow__)); # 394 "/usr/include/signal.h" 3 4 # 1 "/usr/include/bits/pthreadtypes.h" 1 3 4 # 23 "/usr/include/bits/pthreadtypes.h" 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 24 "/usr/include/bits/pthreadtypes.h" 2 3 4 # 50 "/usr/include/bits/pthreadtypes.h" 3 4 typedef unsigned long int pthread_t; typedef union { char __size[56]; long int __align; } pthread_attr_t; typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; # 76 "/usr/include/bits/pthreadtypes.h" 3 4 typedef union { struct __pthread_mutex_s { int __lock; unsigned int __count; int __owner; unsigned int __nusers; int __kind; int __spins; __pthread_list_t __list; # 101 "/usr/include/bits/pthreadtypes.h" 3 4 } __data; char __size[40]; long int __align; } pthread_mutex_t; typedef union { char __size[4]; int __align; } pthread_mutexattr_t; typedef union { struct { int __lock; unsigned int __futex; __extension__ unsigned long long int __total_seq; __extension__ unsigned long long int __wakeup_seq; __extension__ unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; __extension__ long long int __align; } pthread_cond_t; typedef union { char __size[4]; int __align; } pthread_condattr_t; typedef unsigned int pthread_key_t; typedef int pthread_once_t; typedef union { struct { int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; unsigned int __flags; } __data; # 187 "/usr/include/bits/pthreadtypes.h" 3 4 char __size[56]; long int __align; } pthread_rwlock_t; typedef union { char __size[8]; long int __align; } pthread_rwlockattr_t; typedef volatile int pthread_spinlock_t; typedef union { char __size[32]; long int __align; } pthread_barrier_t; typedef union { char __size[4]; int __align; } pthread_barrierattr_t; # 395 "/usr/include/signal.h" 2 3 4 # 1 "/usr/include/bits/sigthread.h" 1 3 4 # 31 "/usr/include/bits/sigthread.h" 3 4 extern int pthread_sigmask (int __how, __const __sigset_t *__restrict __newmask, __sigset_t *__restrict __oldmask)__attribute__ ((__nothrow__)); extern int pthread_kill (pthread_t __threadid, int __signo) __attribute__ ((__nothrow__)); # 396 "/usr/include/signal.h" 2 3 4 extern int __libc_current_sigrtmin (void) __attribute__ ((__nothrow__)); extern int __libc_current_sigrtmax (void) __attribute__ ((__nothrow__)); # 32 "/usr/include/sys/wait.h" 2 3 4 # 1 "/usr/include/sys/resource.h" 1 3 4 # 25 "/usr/include/sys/resource.h" 3 4 # 1 "/usr/include/bits/resource.h" 1 3 4 # 33 "/usr/include/bits/resource.h" 3 4 enum __rlimit_resource { RLIMIT_CPU = 0, RLIMIT_FSIZE = 1, RLIMIT_DATA = 2, RLIMIT_STACK = 3, RLIMIT_CORE = 4, __RLIMIT_RSS = 5, RLIMIT_NOFILE = 7, __RLIMIT_OFILE = RLIMIT_NOFILE, RLIMIT_AS = 9, __RLIMIT_NPROC = 6, __RLIMIT_MEMLOCK = 8, __RLIMIT_LOCKS = 10, __RLIMIT_SIGPENDING = 11, __RLIMIT_MSGQUEUE = 12, __RLIMIT_NICE = 13, __RLIMIT_RTPRIO = 14, __RLIMIT_NLIMITS = 15, __RLIM_NLIMITS = __RLIMIT_NLIMITS }; # 127 "/usr/include/bits/resource.h" 3 4 typedef __rlim_t rlim_t; struct rlimit { rlim_t rlim_cur; rlim_t rlim_max; }; # 154 "/usr/include/bits/resource.h" 3 4 enum __rusage_who { RUSAGE_SELF = 0, RUSAGE_CHILDREN = -1 # 172 "/usr/include/bits/resource.h" 3 4 }; # 1 "/usr/include/bits/time.h" 1 3 4 # 69 "/usr/include/bits/time.h" 3 4 struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; # 176 "/usr/include/bits/resource.h" 2 3 4 struct rusage { struct timeval ru_utime; struct timeval ru_stime; long int ru_maxrss; long int ru_ixrss; long int ru_idrss; long int ru_isrss; long int ru_minflt; long int ru_majflt; long int ru_nswap; long int ru_inblock; long int ru_oublock; long int ru_msgsnd; long int ru_msgrcv; long int ru_nsignals; long int ru_nvcsw; long int ru_nivcsw; }; enum __priority_which { PRIO_PROCESS = 0, PRIO_PGRP = 1, PRIO_USER = 2 }; # 26 "/usr/include/sys/resource.h" 2 3 4 typedef __id_t id_t; # 43 "/usr/include/sys/resource.h" 3 4 typedef int __rlimit_resource_t; typedef int __rusage_who_t; typedef int __priority_which_t; extern int getrlimit (__rlimit_resource_t __resource, struct rlimit *__rlimits) __attribute__ ((__nothrow__)); # 70 "/usr/include/sys/resource.h" 3 4 extern int setrlimit (__rlimit_resource_t __resource, __const struct rlimit *__rlimits) __attribute__ ((__nothrow__)); # 88 "/usr/include/sys/resource.h" 3 4 extern int getrusage (__rusage_who_t __who, struct rusage *__usage) __attribute__ ((__nothrow__)); extern int getpriority (__priority_which_t __which, id_t __who) __attribute__ ((__nothrow__)); extern int setpriority (__priority_which_t __which, id_t __who, int __prio) __attribute__ ((__nothrow__)); # 33 "/usr/include/sys/wait.h" 2 3 4 # 1 "/usr/include/bits/waitflags.h" 1 3 4 # 39 "/usr/include/sys/wait.h" 2 3 4 # 63 "/usr/include/sys/wait.h" 3 4 typedef union { union wait *__uptr; int *__iptr; } __WAIT_STATUS __attribute__ ((__transparent_union__)); # 80 "/usr/include/sys/wait.h" 3 4 # 1 "/usr/include/bits/waitstatus.h" 1 3 4 # 65 "/usr/include/bits/waitstatus.h" 3 4 # 1 "/usr/include/endian.h" 1 3 4 # 37 "/usr/include/endian.h" 3 4 # 1 "/usr/include/bits/endian.h" 1 3 4 # 38 "/usr/include/endian.h" 2 3 4 # 61 "/usr/include/endian.h" 3 4 # 1 "/usr/include/bits/byteswap.h" 1 3 4 # 28 "/usr/include/bits/byteswap.h" 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 29 "/usr/include/bits/byteswap.h" 2 3 4 # 62 "/usr/include/endian.h" 2 3 4 # 66 "/usr/include/bits/waitstatus.h" 2 3 4 union wait { int w_status; struct { unsigned int __w_termsig:7; unsigned int __w_coredump:1; unsigned int __w_retcode:8; unsigned int:16; } __wait_terminated; struct { unsigned int __w_stopval:8; unsigned int __w_stopsig:8; unsigned int:16; } __wait_stopped; }; # 81 "/usr/include/sys/wait.h" 2 3 4 # 102 "/usr/include/sys/wait.h" 3 4 typedef enum { P_ALL, P_PID, P_PGID } idtype_t; # 116 "/usr/include/sys/wait.h" 3 4 extern __pid_t wait (__WAIT_STATUS __stat_loc); # 139 "/usr/include/sys/wait.h" 3 4 extern __pid_t waitpid (__pid_t __pid, int *__stat_loc, int __options); # 1 "/usr/include/bits/siginfo.h" 1 3 4 # 25 "/usr/include/bits/siginfo.h" 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 26 "/usr/include/bits/siginfo.h" 2 3 4 # 144 "/usr/include/sys/wait.h" 2 3 4 # 155 "/usr/include/sys/wait.h" 3 4 extern int waitid (idtype_t __idtype, __id_t __id, siginfo_t *__infop, int __options); struct rusage; extern __pid_t wait3 (__WAIT_STATUS __stat_loc, int __options, struct rusage * __usage) __attribute__ ((__nothrow__)); extern __pid_t wait4 (__pid_t __pid, __WAIT_STATUS __stat_loc, int __options, struct rusage *__usage) __attribute__ ((__nothrow__)); # 3 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 Defined "HAVE_SYS_WAIT_H" to "1" ================================================================================ TEST check from config.headers(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: stdlib.h sh: gcc -E -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c Executing: gcc -E -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c sh: # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" # 1 "" # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/confdefs.h" 1 # 2 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conffix.h" 1 # 3 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 # 1 "/usr/include/stdlib.h" 1 3 4 # 25 "/usr/include/stdlib.h" 3 4 # 1 "/usr/include/features.h" 1 3 4 # 347 "/usr/include/features.h" 3 4 # 1 "/usr/include/sys/cdefs.h" 1 3 4 # 353 "/usr/include/sys/cdefs.h" 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 354 "/usr/include/sys/cdefs.h" 2 3 4 # 348 "/usr/include/features.h" 2 3 4 # 371 "/usr/include/features.h" 3 4 # 1 "/usr/include/gnu/stubs.h" 1 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 5 "/usr/include/gnu/stubs.h" 2 3 4 # 1 "/usr/include/gnu/stubs-64.h" 1 3 4 # 10 "/usr/include/gnu/stubs.h" 2 3 4 # 372 "/usr/include/features.h" 2 3 4 # 26 "/usr/include/stdlib.h" 2 3 4 # 1 "/opt/gcc/4.8.1/snos/lib/gcc/x86_64-suse-linux/4.8.1/include/stddef.h" 1 3 4 # 212 "/opt/gcc/4.8.1/snos/lib/gcc/x86_64-suse-linux/4.8.1/include/stddef.h" 3 4 typedef long unsigned int size_t; # 324 "/opt/gcc/4.8.1/snos/lib/gcc/x86_64-suse-linux/4.8.1/include/stddef.h" 3 4 typedef int wchar_t; # 34 "/usr/include/stdlib.h" 2 3 4 # 96 "/usr/include/stdlib.h" 3 4 typedef struct { int quot; int rem; } div_t; typedef struct { long int quot; long int rem; } ldiv_t; __extension__ typedef struct { long long int quot; long long int rem; } lldiv_t; # 140 "/usr/include/stdlib.h" 3 4 extern size_t __ctype_get_mb_cur_max (void) __attribute__ ((__nothrow__)) ; extern double atof (__const char *__nptr) __attribute__ ((__nothrow__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1))) ; extern int atoi (__const char *__nptr) __attribute__ ((__nothrow__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1))) ; extern long int atol (__const char *__nptr) __attribute__ ((__nothrow__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1))) ; __extension__ extern long long int atoll (__const char *__nptr) __attribute__ ((__nothrow__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1))) ; extern double strtod (__const char *__restrict __nptr, char **__restrict __endptr) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) ; extern float strtof (__const char *__restrict __nptr, char **__restrict __endptr) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) ; extern long double strtold (__const char *__restrict __nptr, char **__restrict __endptr) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) ; extern long int strtol (__const char *__restrict __nptr, char **__restrict __endptr, int __base) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) ; extern unsigned long int strtoul (__const char *__restrict __nptr, char **__restrict __endptr, int __base) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) ; __extension__ extern long long int strtoq (__const char *__restrict __nptr, char **__restrict __endptr, int __base) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) ; __extension__ extern unsigned long long int strtouq (__const char *__restrict __nptr, char **__restrict __endptr, int __base) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) ; __extension__ extern long long int strtoll (__const char *__restrict __nptr, char **__restrict __endptr, int __base) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) ; __extension__ extern unsigned long long int strtoull (__const char *__restrict __nptr, char **__restrict __endptr, int __base) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) ; # 311 "/usr/include/stdlib.h" 3 4 extern char *l64a (long int __n) __attribute__ ((__nothrow__)) ; extern long int a64l (__const char *__s) __attribute__ ((__nothrow__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1))) ; # 1 "/usr/include/sys/types.h" 1 3 4 # 29 "/usr/include/sys/types.h" 3 4 # 1 "/usr/include/bits/types.h" 1 3 4 # 28 "/usr/include/bits/types.h" 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 29 "/usr/include/bits/types.h" 2 3 4 typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; # 131 "/usr/include/bits/types.h" 3 4 # 1 "/usr/include/bits/typesizes.h" 1 3 4 # 132 "/usr/include/bits/types.h" 2 3 4 typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned long int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef long int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; # 32 "/usr/include/sys/types.h" 2 3 4 typedef __u_char u_char; typedef __u_short u_short; typedef __u_int u_int; typedef __u_long u_long; typedef __quad_t quad_t; typedef __u_quad_t u_quad_t; typedef __fsid_t fsid_t; typedef __loff_t loff_t; typedef __ino_t ino_t; # 62 "/usr/include/sys/types.h" 3 4 typedef __dev_t dev_t; typedef __gid_t gid_t; typedef __mode_t mode_t; typedef __nlink_t nlink_t; typedef __uid_t uid_t; typedef __off_t off_t; # 100 "/usr/include/sys/types.h" 3 4 typedef __pid_t pid_t; typedef __id_t id_t; typedef __ssize_t ssize_t; typedef __daddr_t daddr_t; typedef __caddr_t caddr_t; typedef __key_t key_t; # 133 "/usr/include/sys/types.h" 3 4 # 1 "/usr/include/time.h" 1 3 4 # 74 "/usr/include/time.h" 3 4 typedef __time_t time_t; # 92 "/usr/include/time.h" 3 4 typedef __clockid_t clockid_t; # 104 "/usr/include/time.h" 3 4 typedef __timer_t timer_t; # 134 "/usr/include/sys/types.h" 2 3 4 # 147 "/usr/include/sys/types.h" 3 4 # 1 "/opt/gcc/4.8.1/snos/lib/gcc/x86_64-suse-linux/4.8.1/include/stddef.h" 1 3 4 # 148 "/usr/include/sys/types.h" 2 3 4 typedef unsigned long int ulong; typedef unsigned short int ushort; typedef unsigned int uint; # 195 "/usr/include/sys/types.h" 3 4 typedef int int8_t __attribute__ ((__mode__ (__QI__))); typedef int int16_t __attribute__ ((__mode__ (__HI__))); typedef int int32_t __attribute__ ((__mode__ (__SI__))); typedef int int64_t __attribute__ ((__mode__ (__DI__))); typedef unsigned int u_int8_t __attribute__ ((__mode__ (__QI__))); typedef unsigned int u_int16_t __attribute__ ((__mode__ (__HI__))); typedef unsigned int u_int32_t __attribute__ ((__mode__ (__SI__))); typedef unsigned int u_int64_t __attribute__ ((__mode__ (__DI__))); typedef int register_t __attribute__ ((__mode__ (__word__))); # 217 "/usr/include/sys/types.h" 3 4 # 1 "/usr/include/endian.h" 1 3 4 # 37 "/usr/include/endian.h" 3 4 # 1 "/usr/include/bits/endian.h" 1 3 4 # 38 "/usr/include/endian.h" 2 3 4 # 61 "/usr/include/endian.h" 3 4 # 1 "/usr/include/bits/byteswap.h" 1 3 4 # 28 "/usr/include/bits/byteswap.h" 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 29 "/usr/include/bits/byteswap.h" 2 3 4 # 62 "/usr/include/endian.h" 2 3 4 # 218 "/usr/include/sys/types.h" 2 3 4 # 1 "/usr/include/sys/select.h" 1 3 4 # 31 "/usr/include/sys/select.h" 3 4 # 1 "/usr/include/bits/select.h" 1 3 4 # 23 "/usr/include/bits/select.h" 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 24 "/usr/include/bits/select.h" 2 3 4 # 32 "/usr/include/sys/select.h" 2 3 4 # 1 "/usr/include/bits/sigset.h" 1 3 4 # 24 "/usr/include/bits/sigset.h" 3 4 typedef int __sig_atomic_t; typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; # 35 "/usr/include/sys/select.h" 2 3 4 typedef __sigset_t sigset_t; # 1 "/usr/include/time.h" 1 3 4 # 120 "/usr/include/time.h" 3 4 struct timespec { __time_t tv_sec; long int tv_nsec; }; # 45 "/usr/include/sys/select.h" 2 3 4 # 1 "/usr/include/bits/time.h" 1 3 4 # 69 "/usr/include/bits/time.h" 3 4 struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; # 47 "/usr/include/sys/select.h" 2 3 4 typedef __suseconds_t suseconds_t; typedef long int __fd_mask; # 67 "/usr/include/sys/select.h" 3 4 typedef struct { __fd_mask __fds_bits[1024 / (8 * (int) sizeof (__fd_mask))]; } fd_set; typedef __fd_mask fd_mask; # 99 "/usr/include/sys/select.h" 3 4 # 109 "/usr/include/sys/select.h" 3 4 extern int select (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, struct timeval *__restrict __timeout); # 121 "/usr/include/sys/select.h" 3 4 extern int pselect (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, const struct timespec *__restrict __timeout, const __sigset_t *__restrict __sigmask); # 221 "/usr/include/sys/types.h" 2 3 4 # 1 "/usr/include/sys/sysmacros.h" 1 3 4 # 30 "/usr/include/sys/sysmacros.h" 3 4 __extension__ extern unsigned int gnu_dev_major (unsigned long long int __dev) __attribute__ ((__nothrow__)); __extension__ extern unsigned int gnu_dev_minor (unsigned long long int __dev) __attribute__ ((__nothrow__)); __extension__ extern unsigned long long int gnu_dev_makedev (unsigned int __major, unsigned int __minor) __attribute__ ((__nothrow__)); # 224 "/usr/include/sys/types.h" 2 3 4 # 235 "/usr/include/sys/types.h" 3 4 typedef __blkcnt_t blkcnt_t; typedef __fsblkcnt_t fsblkcnt_t; typedef __fsfilcnt_t fsfilcnt_t; # 270 "/usr/include/sys/types.h" 3 4 # 1 "/usr/include/bits/pthreadtypes.h" 1 3 4 # 23 "/usr/include/bits/pthreadtypes.h" 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 24 "/usr/include/bits/pthreadtypes.h" 2 3 4 # 50 "/usr/include/bits/pthreadtypes.h" 3 4 typedef unsigned long int pthread_t; typedef union { char __size[56]; long int __align; } pthread_attr_t; typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; # 76 "/usr/include/bits/pthreadtypes.h" 3 4 typedef union { struct __pthread_mutex_s { int __lock; unsigned int __count; int __owner; unsigned int __nusers; int __kind; int __spins; __pthread_list_t __list; # 101 "/usr/include/bits/pthreadtypes.h" 3 4 } __data; char __size[40]; long int __align; } pthread_mutex_t; typedef union { char __size[4]; int __align; } pthread_mutexattr_t; typedef union { struct { int __lock; unsigned int __futex; __extension__ unsigned long long int __total_seq; __extension__ unsigned long long int __wakeup_seq; __extension__ unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; __extension__ long long int __align; } pthread_cond_t; typedef union { char __size[4]; int __align; } pthread_condattr_t; typedef unsigned int pthread_key_t; typedef int pthread_once_t; typedef union { struct { int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; unsigned int __flags; } __data; # 187 "/usr/include/bits/pthreadtypes.h" 3 4 char __size[56]; long int __align; } pthread_rwlock_t; typedef union { char __size[8]; long int __align; } pthread_rwlockattr_t; typedef volatile int pthread_spinlock_t; typedef union { char __size[32]; long int __align; } pthread_barrier_t; typedef union { char __size[4]; int __align; } pthread_barrierattr_t; # 271 "/usr/include/sys/types.h" 2 3 4 # 321 "/usr/include/stdlib.h" 2 3 4 extern long int random (void) __attribute__ ((__nothrow__)); extern void srandom (unsigned int __seed) __attribute__ ((__nothrow__)); extern char *initstate (unsigned int __seed, char *__statebuf, size_t __statelen) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (2))); extern char *setstate (char *__statebuf) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); struct random_data { int32_t *fptr; int32_t *rptr; int32_t *state; int rand_type; int rand_deg; int rand_sep; int32_t *end_ptr; }; extern int random_r (struct random_data *__restrict __buf, int32_t *__restrict __result) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int srandom_r (unsigned int __seed, struct random_data *__buf) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (2))); extern int initstate_r (unsigned int __seed, char *__restrict __statebuf, size_t __statelen, struct random_data *__restrict __buf) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (2, 4))); extern int setstate_r (char *__restrict __statebuf, struct random_data *__restrict __buf) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int rand (void) __attribute__ ((__nothrow__)); extern void srand (unsigned int __seed) __attribute__ ((__nothrow__)); extern int rand_r (unsigned int *__seed) __attribute__ ((__nothrow__)); extern double drand48 (void) __attribute__ ((__nothrow__)); extern double erand48 (unsigned short int __xsubi[3]) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern long int lrand48 (void) __attribute__ ((__nothrow__)); extern long int nrand48 (unsigned short int __xsubi[3]) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern long int mrand48 (void) __attribute__ ((__nothrow__)); extern long int jrand48 (unsigned short int __xsubi[3]) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern void srand48 (long int __seedval) __attribute__ ((__nothrow__)); extern unsigned short int *seed48 (unsigned short int __seed16v[3]) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern void lcong48 (unsigned short int __param[7]) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); struct drand48_data { unsigned short int __x[3]; unsigned short int __old_x[3]; unsigned short int __c; unsigned short int __init; unsigned long long int __a; }; extern int drand48_r (struct drand48_data *__restrict __buffer, double *__restrict __result) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int erand48_r (unsigned short int __xsubi[3], struct drand48_data *__restrict __buffer, double *__restrict __result) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int lrand48_r (struct drand48_data *__restrict __buffer, long int *__restrict __result) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int nrand48_r (unsigned short int __xsubi[3], struct drand48_data *__restrict __buffer, long int *__restrict __result) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int mrand48_r (struct drand48_data *__restrict __buffer, long int *__restrict __result) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int jrand48_r (unsigned short int __xsubi[3], struct drand48_data *__restrict __buffer, long int *__restrict __result) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int srand48_r (long int __seedval, struct drand48_data *__buffer) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (2))); extern int seed48_r (unsigned short int __seed16v[3], struct drand48_data *__buffer) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int lcong48_r (unsigned short int __param[7], struct drand48_data *__buffer) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern void *malloc (size_t __size) __attribute__ ((__nothrow__)) __attribute__ ((__malloc__)) ; extern void *calloc (size_t __nmemb, size_t __size) __attribute__ ((__nothrow__)) __attribute__ ((__malloc__)) ; extern void *realloc (void *__ptr, size_t __size) __attribute__ ((__nothrow__)) __attribute__ ((__warn_unused_result__)); extern void free (void *__ptr) __attribute__ ((__nothrow__)); extern void cfree (void *__ptr) __attribute__ ((__nothrow__)); # 1 "/usr/include/alloca.h" 1 3 4 # 25 "/usr/include/alloca.h" 3 4 # 1 "/opt/gcc/4.8.1/snos/lib/gcc/x86_64-suse-linux/4.8.1/include/stddef.h" 1 3 4 # 26 "/usr/include/alloca.h" 2 3 4 extern void *alloca (size_t __size) __attribute__ ((__nothrow__)); # 498 "/usr/include/stdlib.h" 2 3 4 extern void *valloc (size_t __size) __attribute__ ((__nothrow__)) __attribute__ ((__malloc__)) ; extern int posix_memalign (void **__memptr, size_t __alignment, size_t __size) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) ; extern void abort (void) __attribute__ ((__nothrow__)) __attribute__ ((__noreturn__)); extern int atexit (void (*__func) (void)) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); # 530 "/usr/include/stdlib.h" 3 4 extern int on_exit (void (*__func) (int __status, void *__arg), void *__arg) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern void exit (int __status) __attribute__ ((__nothrow__)) __attribute__ ((__noreturn__)); # 553 "/usr/include/stdlib.h" 3 4 extern void _Exit (int __status) __attribute__ ((__nothrow__)) __attribute__ ((__noreturn__)); extern char *getenv (__const char *__name) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) ; extern char *__secure_getenv (__const char *__name) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) ; extern int putenv (char *__string) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int setenv (__const char *__name, __const char *__value, int __replace) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (2))); extern int unsetenv (__const char *__name) __attribute__ ((__nothrow__)); extern int clearenv (void) __attribute__ ((__nothrow__)); # 604 "/usr/include/stdlib.h" 3 4 extern char *mktemp (char *__template) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) ; # 615 "/usr/include/stdlib.h" 3 4 extern int mkstemp (char *__template) __attribute__ ((__nonnull__ (1))) ; # 637 "/usr/include/stdlib.h" 3 4 extern int mkstemps (char *__template, int __suffixlen) __attribute__ ((__nonnull__ (1))) ; # 658 "/usr/include/stdlib.h" 3 4 extern char *mkdtemp (char *__template) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) ; # 707 "/usr/include/stdlib.h" 3 4 extern int system (__const char *__command) ; # 729 "/usr/include/stdlib.h" 3 4 extern char *realpath (__const char *__restrict __name, char *__restrict __resolved) __attribute__ ((__nothrow__)) ; typedef int (*__compar_fn_t) (__const void *, __const void *); # 747 "/usr/include/stdlib.h" 3 4 extern void *bsearch (__const void *__key, __const void *__base, size_t __nmemb, size_t __size, __compar_fn_t __compar) __attribute__ ((__nonnull__ (1, 2, 5))) ; extern void qsort (void *__base, size_t __nmemb, size_t __size, __compar_fn_t __compar) __attribute__ ((__nonnull__ (1, 4))); # 766 "/usr/include/stdlib.h" 3 4 extern int abs (int __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)) ; extern long int labs (long int __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)) ; __extension__ extern long long int llabs (long long int __x) __attribute__ ((__nothrow__)) __attribute__ ((__const__)) ; extern div_t div (int __numer, int __denom) __attribute__ ((__nothrow__)) __attribute__ ((__const__)) ; extern ldiv_t ldiv (long int __numer, long int __denom) __attribute__ ((__nothrow__)) __attribute__ ((__const__)) ; __extension__ extern lldiv_t lldiv (long long int __numer, long long int __denom) __attribute__ ((__nothrow__)) __attribute__ ((__const__)) ; # 802 "/usr/include/stdlib.h" 3 4 extern char *ecvt (double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (3, 4))) ; extern char *fcvt (double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (3, 4))) ; extern char *gcvt (double __value, int __ndigit, char *__buf) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (3))) ; extern char *qecvt (long double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (3, 4))) ; extern char *qfcvt (long double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (3, 4))) ; extern char *qgcvt (long double __value, int __ndigit, char *__buf) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (3))) ; extern int ecvt_r (double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign, char *__restrict __buf, size_t __len) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (3, 4, 5))); extern int fcvt_r (double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign, char *__restrict __buf, size_t __len) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (3, 4, 5))); extern int qecvt_r (long double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign, char *__restrict __buf, size_t __len) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (3, 4, 5))); extern int qfcvt_r (long double __value, int __ndigit, int *__restrict __decpt, int *__restrict __sign, char *__restrict __buf, size_t __len) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (3, 4, 5))); extern int mblen (__const char *__s, size_t __n) __attribute__ ((__nothrow__)) ; extern int mbtowc (wchar_t *__restrict __pwc, __const char *__restrict __s, size_t __n) __attribute__ ((__nothrow__)) ; extern int wctomb (char *__s, wchar_t __wchar) __attribute__ ((__nothrow__)) ; extern size_t mbstowcs (wchar_t *__restrict __pwcs, __const char *__restrict __s, size_t __n) __attribute__ ((__nothrow__)); extern size_t wcstombs (char *__restrict __s, __const wchar_t *__restrict __pwcs, size_t __n) __attribute__ ((__nothrow__)); extern int rpmatch (__const char *__response) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) ; # 907 "/usr/include/stdlib.h" 3 4 extern int posix_openpt (int __oflag) ; # 942 "/usr/include/stdlib.h" 3 4 extern int getloadavg (double __loadavg[], int __nelem) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); # 958 "/usr/include/stdlib.h" 3 4 # 3 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 Defined "HAVE_STDLIB_H" to "1" ================================================================================ TEST check from config.headers(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: pthread.h sh: gcc -E -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c Executing: gcc -E -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c sh: # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" # 1 "" # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/confdefs.h" 1 # 2 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conffix.h" 1 # 3 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 # 1 "/usr/include/pthread.h" 1 3 4 # 23 "/usr/include/pthread.h" 3 4 # 1 "/usr/include/features.h" 1 3 4 # 347 "/usr/include/features.h" 3 4 # 1 "/usr/include/sys/cdefs.h" 1 3 4 # 353 "/usr/include/sys/cdefs.h" 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 354 "/usr/include/sys/cdefs.h" 2 3 4 # 348 "/usr/include/features.h" 2 3 4 # 371 "/usr/include/features.h" 3 4 # 1 "/usr/include/gnu/stubs.h" 1 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 5 "/usr/include/gnu/stubs.h" 2 3 4 # 1 "/usr/include/gnu/stubs-64.h" 1 3 4 # 10 "/usr/include/gnu/stubs.h" 2 3 4 # 372 "/usr/include/features.h" 2 3 4 # 24 "/usr/include/pthread.h" 2 3 4 # 1 "/usr/include/endian.h" 1 3 4 # 37 "/usr/include/endian.h" 3 4 # 1 "/usr/include/bits/endian.h" 1 3 4 # 38 "/usr/include/endian.h" 2 3 4 # 61 "/usr/include/endian.h" 3 4 # 1 "/usr/include/bits/byteswap.h" 1 3 4 # 28 "/usr/include/bits/byteswap.h" 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 29 "/usr/include/bits/byteswap.h" 2 3 4 # 62 "/usr/include/endian.h" 2 3 4 # 25 "/usr/include/pthread.h" 2 3 4 # 1 "/usr/include/sched.h" 1 3 4 # 26 "/usr/include/sched.h" 3 4 # 1 "/usr/include/bits/types.h" 1 3 4 # 28 "/usr/include/bits/types.h" 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 29 "/usr/include/bits/types.h" 2 3 4 typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; # 131 "/usr/include/bits/types.h" 3 4 # 1 "/usr/include/bits/typesizes.h" 1 3 4 # 132 "/usr/include/bits/types.h" 2 3 4 typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned long int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef long int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; # 27 "/usr/include/sched.h" 2 3 4 # 1 "/opt/gcc/4.8.1/snos/lib/gcc/x86_64-suse-linux/4.8.1/include/stddef.h" 1 3 4 # 212 "/opt/gcc/4.8.1/snos/lib/gcc/x86_64-suse-linux/4.8.1/include/stddef.h" 3 4 typedef long unsigned int size_t; # 30 "/usr/include/sched.h" 2 3 4 # 1 "/usr/include/time.h" 1 3 4 # 120 "/usr/include/time.h" 3 4 struct timespec { __time_t tv_sec; long int tv_nsec; }; # 33 "/usr/include/sched.h" 2 3 4 # 1 "/usr/include/bits/sched.h" 1 3 4 # 71 "/usr/include/bits/sched.h" 3 4 struct sched_param { int __sched_priority; }; extern int clone (int (*__fn) (void *__arg), void *__child_stack, int __flags, void *__arg, ...) __attribute__ ((__nothrow__)); extern int unshare (int __flags) __attribute__ ((__nothrow__)); extern int sched_getcpu (void) __attribute__ ((__nothrow__)); struct __sched_param { int __sched_priority; }; # 113 "/usr/include/bits/sched.h" 3 4 typedef unsigned long int __cpu_mask; typedef struct { __cpu_mask __bits[4096 / (8 * sizeof (__cpu_mask))]; } cpu_set_t; # 196 "/usr/include/bits/sched.h" 3 4 extern int __sched_cpucount (size_t __setsize, const cpu_set_t *__setp) __attribute__ ((__nothrow__)); extern cpu_set_t *__sched_cpualloc (size_t __count) __attribute__ ((__nothrow__)) ; extern void __sched_cpufree (cpu_set_t *__set) __attribute__ ((__nothrow__)); # 36 "/usr/include/sched.h" 2 3 4 extern int sched_setparam (__pid_t __pid, __const struct sched_param *__param) __attribute__ ((__nothrow__)); extern int sched_getparam (__pid_t __pid, struct sched_param *__param) __attribute__ ((__nothrow__)); extern int sched_setscheduler (__pid_t __pid, int __policy, __const struct sched_param *__param) __attribute__ ((__nothrow__)); extern int sched_getscheduler (__pid_t __pid) __attribute__ ((__nothrow__)); extern int sched_yield (void) __attribute__ ((__nothrow__)); extern int sched_get_priority_max (int __algorithm) __attribute__ ((__nothrow__)); extern int sched_get_priority_min (int __algorithm) __attribute__ ((__nothrow__)); extern int sched_rr_get_interval (__pid_t __pid, struct timespec *__t) __attribute__ ((__nothrow__)); # 118 "/usr/include/sched.h" 3 4 # 26 "/usr/include/pthread.h" 2 3 4 # 1 "/usr/include/time.h" 1 3 4 # 30 "/usr/include/time.h" 3 4 # 1 "/opt/gcc/4.8.1/snos/lib/gcc/x86_64-suse-linux/4.8.1/include/stddef.h" 1 3 4 # 39 "/usr/include/time.h" 2 3 4 # 1 "/usr/include/bits/time.h" 1 3 4 # 43 "/usr/include/time.h" 2 3 4 # 58 "/usr/include/time.h" 3 4 typedef __clock_t clock_t; # 74 "/usr/include/time.h" 3 4 typedef __time_t time_t; # 92 "/usr/include/time.h" 3 4 typedef __clockid_t clockid_t; # 104 "/usr/include/time.h" 3 4 typedef __timer_t timer_t; # 131 "/usr/include/time.h" 3 4 struct tm { int tm_sec; int tm_min; int tm_hour; int tm_mday; int tm_mon; int tm_year; int tm_wday; int tm_yday; int tm_isdst; long int tm_gmtoff; __const char *tm_zone; }; struct itimerspec { struct timespec it_interval; struct timespec it_value; }; struct sigevent; typedef __pid_t pid_t; extern clock_t clock (void) __attribute__ ((__nothrow__)); extern time_t time (time_t *__timer) __attribute__ ((__nothrow__)); extern double difftime (time_t __time1, time_t __time0) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern time_t mktime (struct tm *__tp) __attribute__ ((__nothrow__)); extern size_t strftime (char *__restrict __s, size_t __maxsize, __const char *__restrict __format, __const struct tm *__restrict __tp) __attribute__ ((__nothrow__)); # 215 "/usr/include/time.h" 3 4 # 1 "/usr/include/xlocale.h" 1 3 4 # 28 "/usr/include/xlocale.h" 3 4 typedef struct __locale_struct { struct locale_data *__locales[13]; const unsigned short int *__ctype_b; const int *__ctype_tolower; const int *__ctype_toupper; const char *__names[13]; } *__locale_t; typedef __locale_t locale_t; # 216 "/usr/include/time.h" 2 3 4 extern size_t strftime_l (char *__restrict __s, size_t __maxsize, __const char *__restrict __format, __const struct tm *__restrict __tp, __locale_t __loc) __attribute__ ((__nothrow__)); # 230 "/usr/include/time.h" 3 4 extern struct tm *gmtime (__const time_t *__timer) __attribute__ ((__nothrow__)); extern struct tm *localtime (__const time_t *__timer) __attribute__ ((__nothrow__)); extern struct tm *gmtime_r (__const time_t *__restrict __timer, struct tm *__restrict __tp) __attribute__ ((__nothrow__)); extern struct tm *localtime_r (__const time_t *__restrict __timer, struct tm *__restrict __tp) __attribute__ ((__nothrow__)); extern char *asctime (__const struct tm *__tp) __attribute__ ((__nothrow__)); extern char *ctime (__const time_t *__timer) __attribute__ ((__nothrow__)); extern char *asctime_r (__const struct tm *__restrict __tp, char *__restrict __buf) __attribute__ ((__nothrow__)); extern char *ctime_r (__const time_t *__restrict __timer, char *__restrict __buf) __attribute__ ((__nothrow__)); extern char *__tzname[2]; extern int __daylight; extern long int __timezone; extern char *tzname[2]; extern void tzset (void) __attribute__ ((__nothrow__)); extern int daylight; extern long int timezone; extern int stime (__const time_t *__when) __attribute__ ((__nothrow__)); # 313 "/usr/include/time.h" 3 4 extern time_t timegm (struct tm *__tp) __attribute__ ((__nothrow__)); extern time_t timelocal (struct tm *__tp) __attribute__ ((__nothrow__)); extern int dysize (int __year) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); # 328 "/usr/include/time.h" 3 4 extern int nanosleep (__const struct timespec *__requested_time, struct timespec *__remaining); extern int clock_getres (clockid_t __clock_id, struct timespec *__res) __attribute__ ((__nothrow__)); extern int clock_gettime (clockid_t __clock_id, struct timespec *__tp) __attribute__ ((__nothrow__)); extern int clock_settime (clockid_t __clock_id, __const struct timespec *__tp) __attribute__ ((__nothrow__)); extern int clock_nanosleep (clockid_t __clock_id, int __flags, __const struct timespec *__req, struct timespec *__rem); extern int clock_getcpuclockid (pid_t __pid, clockid_t *__clock_id) __attribute__ ((__nothrow__)); extern int timer_create (clockid_t __clock_id, struct sigevent *__restrict __evp, timer_t *__restrict __timerid) __attribute__ ((__nothrow__)); extern int timer_delete (timer_t __timerid) __attribute__ ((__nothrow__)); extern int timer_settime (timer_t __timerid, int __flags, __const struct itimerspec *__restrict __value, struct itimerspec *__restrict __ovalue) __attribute__ ((__nothrow__)); extern int timer_gettime (timer_t __timerid, struct itimerspec *__value) __attribute__ ((__nothrow__)); extern int timer_getoverrun (timer_t __timerid) __attribute__ ((__nothrow__)); # 417 "/usr/include/time.h" 3 4 # 27 "/usr/include/pthread.h" 2 3 4 # 1 "/usr/include/signal.h" 1 3 4 # 31 "/usr/include/signal.h" 3 4 # 1 "/usr/include/bits/sigset.h" 1 3 4 # 24 "/usr/include/bits/sigset.h" 3 4 typedef int __sig_atomic_t; typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; # 34 "/usr/include/signal.h" 2 3 4 # 50 "/usr/include/signal.h" 3 4 typedef __sigset_t sigset_t; # 408 "/usr/include/signal.h" 3 4 # 30 "/usr/include/pthread.h" 2 3 4 # 1 "/usr/include/bits/pthreadtypes.h" 1 3 4 # 23 "/usr/include/bits/pthreadtypes.h" 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 24 "/usr/include/bits/pthreadtypes.h" 2 3 4 # 50 "/usr/include/bits/pthreadtypes.h" 3 4 typedef unsigned long int pthread_t; typedef union { char __size[56]; long int __align; } pthread_attr_t; typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; # 76 "/usr/include/bits/pthreadtypes.h" 3 4 typedef union { struct __pthread_mutex_s { int __lock; unsigned int __count; int __owner; unsigned int __nusers; int __kind; int __spins; __pthread_list_t __list; # 101 "/usr/include/bits/pthreadtypes.h" 3 4 } __data; char __size[40]; long int __align; } pthread_mutex_t; typedef union { char __size[4]; int __align; } pthread_mutexattr_t; typedef union { struct { int __lock; unsigned int __futex; __extension__ unsigned long long int __total_seq; __extension__ unsigned long long int __wakeup_seq; __extension__ unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; __extension__ long long int __align; } pthread_cond_t; typedef union { char __size[4]; int __align; } pthread_condattr_t; typedef unsigned int pthread_key_t; typedef int pthread_once_t; typedef union { struct { int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; unsigned int __flags; } __data; # 187 "/usr/include/bits/pthreadtypes.h" 3 4 char __size[56]; long int __align; } pthread_rwlock_t; typedef union { char __size[8]; long int __align; } pthread_rwlockattr_t; typedef volatile int pthread_spinlock_t; typedef union { char __size[32]; long int __align; } pthread_barrier_t; typedef union { char __size[4]; int __align; } pthread_barrierattr_t; # 31 "/usr/include/pthread.h" 2 3 4 # 1 "/usr/include/bits/setjmp.h" 1 3 4 # 27 "/usr/include/bits/setjmp.h" 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 28 "/usr/include/bits/setjmp.h" 2 3 4 typedef long int __jmp_buf[8]; # 32 "/usr/include/pthread.h" 2 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 33 "/usr/include/pthread.h" 2 3 4 enum { PTHREAD_CREATE_JOINABLE, PTHREAD_CREATE_DETACHED }; enum { PTHREAD_MUTEX_TIMED_NP, PTHREAD_MUTEX_RECURSIVE_NP, PTHREAD_MUTEX_ERRORCHECK_NP, PTHREAD_MUTEX_ADAPTIVE_NP # 63 "/usr/include/pthread.h" 3 4 }; enum { PTHREAD_MUTEX_STALLED, PTHREAD_MUTEX_STALLED_NP = PTHREAD_MUTEX_STALLED, PTHREAD_MUTEX_ROBUST, PTHREAD_MUTEX_ROBUST_NP = PTHREAD_MUTEX_ROBUST }; # 117 "/usr/include/pthread.h" 3 4 enum { PTHREAD_RWLOCK_PREFER_READER_NP, PTHREAD_RWLOCK_PREFER_WRITER_NP, PTHREAD_RWLOCK_PREFER_WRITER_NONRECURSIVE_NP, PTHREAD_RWLOCK_DEFAULT_NP = PTHREAD_RWLOCK_PREFER_READER_NP }; # 149 "/usr/include/pthread.h" 3 4 enum { PTHREAD_INHERIT_SCHED, PTHREAD_EXPLICIT_SCHED }; enum { PTHREAD_SCOPE_SYSTEM, PTHREAD_SCOPE_PROCESS }; enum { PTHREAD_PROCESS_PRIVATE, PTHREAD_PROCESS_SHARED }; # 184 "/usr/include/pthread.h" 3 4 struct _pthread_cleanup_buffer { void (*__routine) (void *); void *__arg; int __canceltype; struct _pthread_cleanup_buffer *__prev; }; enum { PTHREAD_CANCEL_ENABLE, PTHREAD_CANCEL_DISABLE }; enum { PTHREAD_CANCEL_DEFERRED, PTHREAD_CANCEL_ASYNCHRONOUS }; # 222 "/usr/include/pthread.h" 3 4 extern int pthread_create (pthread_t *__restrict __newthread, __const pthread_attr_t *__restrict __attr, void *(*__start_routine) (void *), void *__restrict __arg) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 3))); extern void pthread_exit (void *__retval) __attribute__ ((__noreturn__)); extern int pthread_join (pthread_t __th, void **__thread_return); # 265 "/usr/include/pthread.h" 3 4 extern int pthread_detach (pthread_t __th) __attribute__ ((__nothrow__)); extern pthread_t pthread_self (void) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern int pthread_equal (pthread_t __thread1, pthread_t __thread2) __attribute__ ((__nothrow__)); extern int pthread_attr_init (pthread_attr_t *__attr) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_attr_destroy (pthread_attr_t *__attr) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_attr_getdetachstate (__const pthread_attr_t *__attr, int *__detachstate) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int pthread_attr_setdetachstate (pthread_attr_t *__attr, int __detachstate) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_attr_getguardsize (__const pthread_attr_t *__attr, size_t *__guardsize) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int pthread_attr_setguardsize (pthread_attr_t *__attr, size_t __guardsize) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_attr_getschedparam (__const pthread_attr_t *__restrict __attr, struct sched_param *__restrict __param) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int pthread_attr_setschedparam (pthread_attr_t *__restrict __attr, __const struct sched_param *__restrict __param) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int pthread_attr_getschedpolicy (__const pthread_attr_t *__restrict __attr, int *__restrict __policy) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int pthread_attr_setschedpolicy (pthread_attr_t *__attr, int __policy) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_attr_getinheritsched (__const pthread_attr_t *__restrict __attr, int *__restrict __inherit) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int pthread_attr_setinheritsched (pthread_attr_t *__attr, int __inherit) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_attr_getscope (__const pthread_attr_t *__restrict __attr, int *__restrict __scope) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int pthread_attr_setscope (pthread_attr_t *__attr, int __scope) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_attr_getstackaddr (__const pthread_attr_t *__restrict __attr, void **__restrict __stackaddr) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))) __attribute__ ((__deprecated__)); extern int pthread_attr_setstackaddr (pthread_attr_t *__attr, void *__stackaddr) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) __attribute__ ((__deprecated__)); extern int pthread_attr_getstacksize (__const pthread_attr_t *__restrict __attr, size_t *__restrict __stacksize) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int pthread_attr_setstacksize (pthread_attr_t *__attr, size_t __stacksize) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_attr_getstack (__const pthread_attr_t *__restrict __attr, void **__restrict __stackaddr, size_t *__restrict __stacksize) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2, 3))); extern int pthread_attr_setstack (pthread_attr_t *__attr, void *__stackaddr, size_t __stacksize) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); # 415 "/usr/include/pthread.h" 3 4 extern int pthread_setschedparam (pthread_t __target_thread, int __policy, __const struct sched_param *__param) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (3))); extern int pthread_getschedparam (pthread_t __target_thread, int *__restrict __policy, struct sched_param *__restrict __param) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (2, 3))); extern int pthread_setschedprio (pthread_t __target_thread, int __prio) __attribute__ ((__nothrow__)); # 468 "/usr/include/pthread.h" 3 4 extern int pthread_once (pthread_once_t *__once_control, void (*__init_routine) (void)) __attribute__ ((__nonnull__ (1, 2))); # 480 "/usr/include/pthread.h" 3 4 extern int pthread_setcancelstate (int __state, int *__oldstate); extern int pthread_setcanceltype (int __type, int *__oldtype); extern int pthread_cancel (pthread_t __th); extern void pthread_testcancel (void); typedef struct { struct { __jmp_buf __cancel_jmp_buf; int __mask_was_saved; } __cancel_jmp_buf[1]; void *__pad[4]; } __pthread_unwind_buf_t __attribute__ ((__aligned__)); # 514 "/usr/include/pthread.h" 3 4 struct __pthread_cleanup_frame { void (*__cancel_routine) (void *); void *__cancel_arg; int __do_it; int __cancel_type; }; # 654 "/usr/include/pthread.h" 3 4 extern void __pthread_register_cancel (__pthread_unwind_buf_t *__buf) ; # 666 "/usr/include/pthread.h" 3 4 extern void __pthread_unregister_cancel (__pthread_unwind_buf_t *__buf) ; # 707 "/usr/include/pthread.h" 3 4 extern void __pthread_unwind_next (__pthread_unwind_buf_t *__buf) __attribute__ ((__noreturn__)) __attribute__ ((__weak__)) ; struct __jmp_buf_tag; extern int __sigsetjmp (struct __jmp_buf_tag *__env, int __savemask) __attribute__ ((__nothrow__)); extern int pthread_mutex_init (pthread_mutex_t *__mutex, __const pthread_mutexattr_t *__mutexattr) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_mutex_destroy (pthread_mutex_t *__mutex) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_mutex_trylock (pthread_mutex_t *__mutex) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_mutex_lock (pthread_mutex_t *__mutex) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_mutex_timedlock (pthread_mutex_t *__restrict __mutex, __const struct timespec *__restrict __abstime) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int pthread_mutex_unlock (pthread_mutex_t *__mutex) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); # 769 "/usr/include/pthread.h" 3 4 extern int pthread_mutex_consistent_np (pthread_mutex_t *__mutex) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); # 782 "/usr/include/pthread.h" 3 4 extern int pthread_mutexattr_init (pthread_mutexattr_t *__attr) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_mutexattr_destroy (pthread_mutexattr_t *__attr) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_mutexattr_getpshared (__const pthread_mutexattr_t * __restrict __attr, int *__restrict __pshared) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int pthread_mutexattr_setpshared (pthread_mutexattr_t *__attr, int __pshared) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); # 838 "/usr/include/pthread.h" 3 4 extern int pthread_mutexattr_getrobust (__const pthread_mutexattr_t *__attr, int *__robustness) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int pthread_mutexattr_setrobust (pthread_mutexattr_t *__attr, int __robustness) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); # 864 "/usr/include/pthread.h" 3 4 extern int pthread_rwlock_init (pthread_rwlock_t *__restrict __rwlock, __const pthread_rwlockattr_t *__restrict __attr) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_rwlock_destroy (pthread_rwlock_t *__rwlock) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_rwlock_rdlock (pthread_rwlock_t *__rwlock) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_rwlock_tryrdlock (pthread_rwlock_t *__rwlock) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_rwlock_timedrdlock (pthread_rwlock_t *__restrict __rwlock, __const struct timespec *__restrict __abstime) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int pthread_rwlock_wrlock (pthread_rwlock_t *__rwlock) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_rwlock_trywrlock (pthread_rwlock_t *__rwlock) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_rwlock_timedwrlock (pthread_rwlock_t *__restrict __rwlock, __const struct timespec *__restrict __abstime) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int pthread_rwlock_unlock (pthread_rwlock_t *__rwlock) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_rwlockattr_init (pthread_rwlockattr_t *__attr) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_rwlockattr_destroy (pthread_rwlockattr_t *__attr) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_rwlockattr_getpshared (__const pthread_rwlockattr_t * __restrict __attr, int *__restrict __pshared) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int pthread_rwlockattr_setpshared (pthread_rwlockattr_t *__attr, int __pshared) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_rwlockattr_getkind_np (__const pthread_rwlockattr_t * __restrict __attr, int *__restrict __pref) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int pthread_rwlockattr_setkind_np (pthread_rwlockattr_t *__attr, int __pref) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_cond_init (pthread_cond_t *__restrict __cond, __const pthread_condattr_t *__restrict __cond_attr) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_cond_destroy (pthread_cond_t *__cond) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_cond_signal (pthread_cond_t *__cond) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_cond_broadcast (pthread_cond_t *__cond) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_cond_wait (pthread_cond_t *__restrict __cond, pthread_mutex_t *__restrict __mutex) __attribute__ ((__nonnull__ (1, 2))); # 976 "/usr/include/pthread.h" 3 4 extern int pthread_cond_timedwait (pthread_cond_t *__restrict __cond, pthread_mutex_t *__restrict __mutex, __const struct timespec *__restrict __abstime) __attribute__ ((__nonnull__ (1, 2, 3))); extern int pthread_condattr_init (pthread_condattr_t *__attr) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_condattr_destroy (pthread_condattr_t *__attr) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_condattr_getpshared (__const pthread_condattr_t * __restrict __attr, int *__restrict __pshared) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int pthread_condattr_setpshared (pthread_condattr_t *__attr, int __pshared) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_condattr_getclock (__const pthread_condattr_t * __restrict __attr, __clockid_t *__restrict __clock_id) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int pthread_condattr_setclock (pthread_condattr_t *__attr, __clockid_t __clock_id) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); # 1020 "/usr/include/pthread.h" 3 4 extern int pthread_spin_init (pthread_spinlock_t *__lock, int __pshared) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_spin_destroy (pthread_spinlock_t *__lock) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_spin_lock (pthread_spinlock_t *__lock) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_spin_trylock (pthread_spinlock_t *__lock) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_spin_unlock (pthread_spinlock_t *__lock) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_barrier_init (pthread_barrier_t *__restrict __barrier, __const pthread_barrierattr_t *__restrict __attr, unsigned int __count) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_barrier_destroy (pthread_barrier_t *__barrier) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_barrier_wait (pthread_barrier_t *__barrier) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_barrierattr_init (pthread_barrierattr_t *__attr) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_barrierattr_destroy (pthread_barrierattr_t *__attr) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_barrierattr_getpshared (__const pthread_barrierattr_t * __restrict __attr, int *__restrict __pshared) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int pthread_barrierattr_setpshared (pthread_barrierattr_t *__attr, int __pshared) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); # 1087 "/usr/include/pthread.h" 3 4 extern int pthread_key_create (pthread_key_t *__key, void (*__destr_function) (void *)) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int pthread_key_delete (pthread_key_t __key) __attribute__ ((__nothrow__)); extern void *pthread_getspecific (pthread_key_t __key) __attribute__ ((__nothrow__)); extern int pthread_setspecific (pthread_key_t __key, __const void *__pointer) __attribute__ ((__nothrow__)) ; extern int pthread_getcpuclockid (pthread_t __thread_id, __clockid_t *__clock_id) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (2))); # 1121 "/usr/include/pthread.h" 3 4 extern int pthread_atfork (void (*__prepare) (void), void (*__parent) (void), void (*__child) (void)) __attribute__ ((__nothrow__)); # 1135 "/usr/include/pthread.h" 3 4 # 3 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 Defined "HAVE_PTHREAD_H" to "1" ================================================================================ TEST check from config.headers(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: setjmp.h sh: gcc -E -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c Executing: gcc -E -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c sh: # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" # 1 "" # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/confdefs.h" 1 # 2 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conffix.h" 1 # 3 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 # 1 "/usr/include/setjmp.h" 1 3 4 # 26 "/usr/include/setjmp.h" 3 4 # 1 "/usr/include/features.h" 1 3 4 # 347 "/usr/include/features.h" 3 4 # 1 "/usr/include/sys/cdefs.h" 1 3 4 # 353 "/usr/include/sys/cdefs.h" 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 354 "/usr/include/sys/cdefs.h" 2 3 4 # 348 "/usr/include/features.h" 2 3 4 # 371 "/usr/include/features.h" 3 4 # 1 "/usr/include/gnu/stubs.h" 1 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 5 "/usr/include/gnu/stubs.h" 2 3 4 # 1 "/usr/include/gnu/stubs-64.h" 1 3 4 # 10 "/usr/include/gnu/stubs.h" 2 3 4 # 372 "/usr/include/features.h" 2 3 4 # 27 "/usr/include/setjmp.h" 2 3 4 # 1 "/usr/include/bits/setjmp.h" 1 3 4 # 27 "/usr/include/bits/setjmp.h" 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 28 "/usr/include/bits/setjmp.h" 2 3 4 typedef long int __jmp_buf[8]; # 31 "/usr/include/setjmp.h" 2 3 4 # 1 "/usr/include/bits/sigset.h" 1 3 4 # 24 "/usr/include/bits/sigset.h" 3 4 typedef int __sig_atomic_t; typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; # 32 "/usr/include/setjmp.h" 2 3 4 struct __jmp_buf_tag { __jmp_buf __jmpbuf; int __mask_was_saved; __sigset_t __saved_mask; }; typedef struct __jmp_buf_tag jmp_buf[1]; extern int setjmp (jmp_buf __env) __attribute__ ((__nothrow__)); extern int __sigsetjmp (struct __jmp_buf_tag __env[1], int __savemask) __attribute__ ((__nothrow__)); extern int _setjmp (struct __jmp_buf_tag __env[1]) __attribute__ ((__nothrow__)); # 78 "/usr/include/setjmp.h" 3 4 extern void longjmp (struct __jmp_buf_tag __env[1], int __val) __attribute__ ((__nothrow__)) __attribute__ ((__noreturn__)); extern void _longjmp (struct __jmp_buf_tag __env[1], int __val) __attribute__ ((__nothrow__)) __attribute__ ((__noreturn__)); typedef struct __jmp_buf_tag sigjmp_buf[1]; # 110 "/usr/include/setjmp.h" 3 4 extern void siglongjmp (sigjmp_buf __env, int __val) __attribute__ ((__nothrow__)) __attribute__ ((__noreturn__)); # 120 "/usr/include/setjmp.h" 3 4 # 3 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 Defined "HAVE_SETJMP_H" to "1" ================================================================================ TEST check from config.headers(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/utsname.h sh: gcc -E -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c Executing: gcc -E -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c sh: # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" # 1 "" # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/confdefs.h" 1 # 2 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conffix.h" 1 # 3 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 # 1 "/usr/include/sys/utsname.h" 1 3 4 # 26 "/usr/include/sys/utsname.h" 3 4 # 1 "/usr/include/features.h" 1 3 4 # 347 "/usr/include/features.h" 3 4 # 1 "/usr/include/sys/cdefs.h" 1 3 4 # 353 "/usr/include/sys/cdefs.h" 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 354 "/usr/include/sys/cdefs.h" 2 3 4 # 348 "/usr/include/features.h" 2 3 4 # 371 "/usr/include/features.h" 3 4 # 1 "/usr/include/gnu/stubs.h" 1 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 5 "/usr/include/gnu/stubs.h" 2 3 4 # 1 "/usr/include/gnu/stubs-64.h" 1 3 4 # 10 "/usr/include/gnu/stubs.h" 2 3 4 # 372 "/usr/include/features.h" 2 3 4 # 27 "/usr/include/sys/utsname.h" 2 3 4 # 1 "/usr/include/bits/utsname.h" 1 3 4 # 31 "/usr/include/sys/utsname.h" 2 3 4 # 49 "/usr/include/sys/utsname.h" 3 4 struct utsname { char sysname[65]; char nodename[65]; char release[65]; char version[65]; char machine[65]; char __domainname[65]; }; # 82 "/usr/include/sys/utsname.h" 3 4 extern int uname (struct utsname *__name) __attribute__ ((__nothrow__)); # 3 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 Defined "HAVE_SYS_UTSNAME_H" to "1" ================================================================================ TEST check from config.headers(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: machine/endian.h sh: gcc -E -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c Executing: gcc -E -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c sh: # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" # 1 "" # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/confdefs.h" 1 # 2 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conffix.h" 1 # 3 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 Possible ERROR while running preprocessor: /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c:3:28: fatal error: machine/endian.h: No such file or directory #include ^ compilation terminated. ret = 256 error message = {/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c:3:28: fatal error: machine/endian.h: No such file or directory #include ^ compilation terminated. } Source: #include "confdefs.h" #include "conffix.h" #include ================================================================================ TEST check from config.headers(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: limits.h sh: gcc -E -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c Executing: gcc -E -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c sh: # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" # 1 "" # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/confdefs.h" 1 # 2 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conffix.h" 1 # 3 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 # 1 "/opt/gcc/4.8.1/snos/lib/gcc/x86_64-suse-linux/4.8.1/include-fixed/limits.h" 1 3 4 # 34 "/opt/gcc/4.8.1/snos/lib/gcc/x86_64-suse-linux/4.8.1/include-fixed/limits.h" 3 4 # 1 "/opt/gcc/4.8.1/snos/lib/gcc/x86_64-suse-linux/4.8.1/include-fixed/syslimits.h" 1 3 4 # 1 "/opt/gcc/4.8.1/snos/lib/gcc/x86_64-suse-linux/4.8.1/include-fixed/limits.h" 1 3 4 # 168 "/opt/gcc/4.8.1/snos/lib/gcc/x86_64-suse-linux/4.8.1/include-fixed/limits.h" 3 4 # 1 "/usr/include/limits.h" 1 3 4 # 27 "/usr/include/limits.h" 3 4 # 1 "/usr/include/features.h" 1 3 4 # 347 "/usr/include/features.h" 3 4 # 1 "/usr/include/sys/cdefs.h" 1 3 4 # 353 "/usr/include/sys/cdefs.h" 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 354 "/usr/include/sys/cdefs.h" 2 3 4 # 348 "/usr/include/features.h" 2 3 4 # 371 "/usr/include/features.h" 3 4 # 1 "/usr/include/gnu/stubs.h" 1 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 5 "/usr/include/gnu/stubs.h" 2 3 4 # 1 "/usr/include/gnu/stubs-64.h" 1 3 4 # 10 "/usr/include/gnu/stubs.h" 2 3 4 # 372 "/usr/include/features.h" 2 3 4 # 28 "/usr/include/limits.h" 2 3 4 # 145 "/usr/include/limits.h" 3 4 # 1 "/usr/include/bits/posix1_lim.h" 1 3 4 # 157 "/usr/include/bits/posix1_lim.h" 3 4 # 1 "/usr/include/bits/local_lim.h" 1 3 4 # 39 "/usr/include/bits/local_lim.h" 3 4 # 1 "/usr/include/linux/limits.h" 1 3 4 # 40 "/usr/include/bits/local_lim.h" 2 3 4 # 158 "/usr/include/bits/posix1_lim.h" 2 3 4 # 146 "/usr/include/limits.h" 2 3 4 # 1 "/usr/include/bits/posix2_lim.h" 1 3 4 # 150 "/usr/include/limits.h" 2 3 4 # 169 "/opt/gcc/4.8.1/snos/lib/gcc/x86_64-suse-linux/4.8.1/include-fixed/limits.h" 2 3 4 # 8 "/opt/gcc/4.8.1/snos/lib/gcc/x86_64-suse-linux/4.8.1/include-fixed/syslimits.h" 2 3 4 # 35 "/opt/gcc/4.8.1/snos/lib/gcc/x86_64-suse-linux/4.8.1/include-fixed/limits.h" 2 3 4 # 3 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 Defined "HAVE_LIMITS_H" to "1" ================================================================================ TEST check from config.headers(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: fcntl.h sh: gcc -E -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c Executing: gcc -E -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c sh: # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" # 1 "" # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/confdefs.h" 1 # 2 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conffix.h" 1 # 3 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 # 1 "/usr/include/fcntl.h" 1 3 4 # 27 "/usr/include/fcntl.h" 3 4 # 1 "/usr/include/features.h" 1 3 4 # 347 "/usr/include/features.h" 3 4 # 1 "/usr/include/sys/cdefs.h" 1 3 4 # 353 "/usr/include/sys/cdefs.h" 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 354 "/usr/include/sys/cdefs.h" 2 3 4 # 348 "/usr/include/features.h" 2 3 4 # 371 "/usr/include/features.h" 3 4 # 1 "/usr/include/gnu/stubs.h" 1 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 5 "/usr/include/gnu/stubs.h" 2 3 4 # 1 "/usr/include/gnu/stubs-64.h" 1 3 4 # 10 "/usr/include/gnu/stubs.h" 2 3 4 # 372 "/usr/include/features.h" 2 3 4 # 28 "/usr/include/fcntl.h" 2 3 4 # 1 "/usr/include/bits/fcntl.h" 1 3 4 # 24 "/usr/include/bits/fcntl.h" 3 4 # 1 "/usr/include/sys/types.h" 1 3 4 # 29 "/usr/include/sys/types.h" 3 4 # 1 "/usr/include/bits/types.h" 1 3 4 # 28 "/usr/include/bits/types.h" 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 29 "/usr/include/bits/types.h" 2 3 4 typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; # 131 "/usr/include/bits/types.h" 3 4 # 1 "/usr/include/bits/typesizes.h" 1 3 4 # 132 "/usr/include/bits/types.h" 2 3 4 typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned long int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef long int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; # 32 "/usr/include/sys/types.h" 2 3 4 typedef __u_char u_char; typedef __u_short u_short; typedef __u_int u_int; typedef __u_long u_long; typedef __quad_t quad_t; typedef __u_quad_t u_quad_t; typedef __fsid_t fsid_t; typedef __loff_t loff_t; typedef __ino_t ino_t; # 62 "/usr/include/sys/types.h" 3 4 typedef __dev_t dev_t; typedef __gid_t gid_t; typedef __mode_t mode_t; typedef __nlink_t nlink_t; typedef __uid_t uid_t; typedef __off_t off_t; # 100 "/usr/include/sys/types.h" 3 4 typedef __pid_t pid_t; typedef __id_t id_t; typedef __ssize_t ssize_t; typedef __daddr_t daddr_t; typedef __caddr_t caddr_t; typedef __key_t key_t; # 133 "/usr/include/sys/types.h" 3 4 # 1 "/usr/include/time.h" 1 3 4 # 74 "/usr/include/time.h" 3 4 typedef __time_t time_t; # 92 "/usr/include/time.h" 3 4 typedef __clockid_t clockid_t; # 104 "/usr/include/time.h" 3 4 typedef __timer_t timer_t; # 134 "/usr/include/sys/types.h" 2 3 4 # 147 "/usr/include/sys/types.h" 3 4 # 1 "/opt/gcc/4.8.1/snos/lib/gcc/x86_64-suse-linux/4.8.1/include/stddef.h" 1 3 4 # 212 "/opt/gcc/4.8.1/snos/lib/gcc/x86_64-suse-linux/4.8.1/include/stddef.h" 3 4 typedef long unsigned int size_t; # 148 "/usr/include/sys/types.h" 2 3 4 typedef unsigned long int ulong; typedef unsigned short int ushort; typedef unsigned int uint; # 195 "/usr/include/sys/types.h" 3 4 typedef int int8_t __attribute__ ((__mode__ (__QI__))); typedef int int16_t __attribute__ ((__mode__ (__HI__))); typedef int int32_t __attribute__ ((__mode__ (__SI__))); typedef int int64_t __attribute__ ((__mode__ (__DI__))); typedef unsigned int u_int8_t __attribute__ ((__mode__ (__QI__))); typedef unsigned int u_int16_t __attribute__ ((__mode__ (__HI__))); typedef unsigned int u_int32_t __attribute__ ((__mode__ (__SI__))); typedef unsigned int u_int64_t __attribute__ ((__mode__ (__DI__))); typedef int register_t __attribute__ ((__mode__ (__word__))); # 217 "/usr/include/sys/types.h" 3 4 # 1 "/usr/include/endian.h" 1 3 4 # 37 "/usr/include/endian.h" 3 4 # 1 "/usr/include/bits/endian.h" 1 3 4 # 38 "/usr/include/endian.h" 2 3 4 # 61 "/usr/include/endian.h" 3 4 # 1 "/usr/include/bits/byteswap.h" 1 3 4 # 28 "/usr/include/bits/byteswap.h" 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 29 "/usr/include/bits/byteswap.h" 2 3 4 # 62 "/usr/include/endian.h" 2 3 4 # 218 "/usr/include/sys/types.h" 2 3 4 # 1 "/usr/include/sys/select.h" 1 3 4 # 31 "/usr/include/sys/select.h" 3 4 # 1 "/usr/include/bits/select.h" 1 3 4 # 23 "/usr/include/bits/select.h" 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 24 "/usr/include/bits/select.h" 2 3 4 # 32 "/usr/include/sys/select.h" 2 3 4 # 1 "/usr/include/bits/sigset.h" 1 3 4 # 24 "/usr/include/bits/sigset.h" 3 4 typedef int __sig_atomic_t; typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; # 35 "/usr/include/sys/select.h" 2 3 4 typedef __sigset_t sigset_t; # 1 "/usr/include/time.h" 1 3 4 # 120 "/usr/include/time.h" 3 4 struct timespec { __time_t tv_sec; long int tv_nsec; }; # 45 "/usr/include/sys/select.h" 2 3 4 # 1 "/usr/include/bits/time.h" 1 3 4 # 69 "/usr/include/bits/time.h" 3 4 struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; # 47 "/usr/include/sys/select.h" 2 3 4 typedef __suseconds_t suseconds_t; typedef long int __fd_mask; # 67 "/usr/include/sys/select.h" 3 4 typedef struct { __fd_mask __fds_bits[1024 / (8 * (int) sizeof (__fd_mask))]; } fd_set; typedef __fd_mask fd_mask; # 99 "/usr/include/sys/select.h" 3 4 # 109 "/usr/include/sys/select.h" 3 4 extern int select (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, struct timeval *__restrict __timeout); # 121 "/usr/include/sys/select.h" 3 4 extern int pselect (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, const struct timespec *__restrict __timeout, const __sigset_t *__restrict __sigmask); # 221 "/usr/include/sys/types.h" 2 3 4 # 1 "/usr/include/sys/sysmacros.h" 1 3 4 # 30 "/usr/include/sys/sysmacros.h" 3 4 __extension__ extern unsigned int gnu_dev_major (unsigned long long int __dev) __attribute__ ((__nothrow__)); __extension__ extern unsigned int gnu_dev_minor (unsigned long long int __dev) __attribute__ ((__nothrow__)); __extension__ extern unsigned long long int gnu_dev_makedev (unsigned int __major, unsigned int __minor) __attribute__ ((__nothrow__)); # 224 "/usr/include/sys/types.h" 2 3 4 # 235 "/usr/include/sys/types.h" 3 4 typedef __blkcnt_t blkcnt_t; typedef __fsblkcnt_t fsblkcnt_t; typedef __fsfilcnt_t fsfilcnt_t; # 270 "/usr/include/sys/types.h" 3 4 # 1 "/usr/include/bits/pthreadtypes.h" 1 3 4 # 23 "/usr/include/bits/pthreadtypes.h" 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 24 "/usr/include/bits/pthreadtypes.h" 2 3 4 # 50 "/usr/include/bits/pthreadtypes.h" 3 4 typedef unsigned long int pthread_t; typedef union { char __size[56]; long int __align; } pthread_attr_t; typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; # 76 "/usr/include/bits/pthreadtypes.h" 3 4 typedef union { struct __pthread_mutex_s { int __lock; unsigned int __count; int __owner; unsigned int __nusers; int __kind; int __spins; __pthread_list_t __list; # 101 "/usr/include/bits/pthreadtypes.h" 3 4 } __data; char __size[40]; long int __align; } pthread_mutex_t; typedef union { char __size[4]; int __align; } pthread_mutexattr_t; typedef union { struct { int __lock; unsigned int __futex; __extension__ unsigned long long int __total_seq; __extension__ unsigned long long int __wakeup_seq; __extension__ unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; __extension__ long long int __align; } pthread_cond_t; typedef union { char __size[4]; int __align; } pthread_condattr_t; typedef unsigned int pthread_key_t; typedef int pthread_once_t; typedef union { struct { int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; unsigned int __flags; } __data; # 187 "/usr/include/bits/pthreadtypes.h" 3 4 char __size[56]; long int __align; } pthread_rwlock_t; typedef union { char __size[8]; long int __align; } pthread_rwlockattr_t; typedef volatile int pthread_spinlock_t; typedef union { char __size[32]; long int __align; } pthread_barrier_t; typedef union { char __size[4]; int __align; } pthread_barrierattr_t; # 271 "/usr/include/sys/types.h" 2 3 4 # 25 "/usr/include/bits/fcntl.h" 2 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 26 "/usr/include/bits/fcntl.h" 2 3 4 # 160 "/usr/include/bits/fcntl.h" 3 4 struct flock { short int l_type; short int l_whence; __off_t l_start; __off_t l_len; __pid_t l_pid; }; # 244 "/usr/include/bits/fcntl.h" 3 4 # 289 "/usr/include/bits/fcntl.h" 3 4 # 35 "/usr/include/fcntl.h" 2 3 4 # 78 "/usr/include/fcntl.h" 3 4 extern int fcntl (int __fd, int __cmd, ...); # 87 "/usr/include/fcntl.h" 3 4 extern int open (__const char *__file, int __oflag, ...) __attribute__ ((__nonnull__ (1))); # 111 "/usr/include/fcntl.h" 3 4 extern int openat (int __fd, __const char *__file, int __oflag, ...) __attribute__ ((__nonnull__ (2))); # 122 "/usr/include/fcntl.h" 3 4 extern int openat64 (int __fd, __const char *__file, int __oflag, ...) __attribute__ ((__nonnull__ (2))); # 132 "/usr/include/fcntl.h" 3 4 extern int creat (__const char *__file, __mode_t __mode) __attribute__ ((__nonnull__ (1))); # 161 "/usr/include/fcntl.h" 3 4 extern int lockf (int __fd, int __cmd, __off_t __len); # 178 "/usr/include/fcntl.h" 3 4 extern int posix_fadvise (int __fd, __off_t __offset, __off_t __len, int __advise) __attribute__ ((__nothrow__)); # 200 "/usr/include/fcntl.h" 3 4 extern int posix_fallocate (int __fd, __off_t __offset, __off_t __len); # 222 "/usr/include/fcntl.h" 3 4 # 3 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 Defined "HAVE_FCNTL_H" to "1" ================================================================================ TEST check from config.headers(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: string.h sh: gcc -E -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c Executing: gcc -E -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c sh: # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" # 1 "" # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/confdefs.h" 1 # 2 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conffix.h" 1 # 3 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 # 1 "/usr/include/string.h" 1 3 4 # 26 "/usr/include/string.h" 3 4 # 1 "/usr/include/features.h" 1 3 4 # 347 "/usr/include/features.h" 3 4 # 1 "/usr/include/sys/cdefs.h" 1 3 4 # 353 "/usr/include/sys/cdefs.h" 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 354 "/usr/include/sys/cdefs.h" 2 3 4 # 348 "/usr/include/features.h" 2 3 4 # 371 "/usr/include/features.h" 3 4 # 1 "/usr/include/gnu/stubs.h" 1 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 5 "/usr/include/gnu/stubs.h" 2 3 4 # 1 "/usr/include/gnu/stubs-64.h" 1 3 4 # 10 "/usr/include/gnu/stubs.h" 2 3 4 # 372 "/usr/include/features.h" 2 3 4 # 27 "/usr/include/string.h" 2 3 4 # 1 "/opt/gcc/4.8.1/snos/lib/gcc/x86_64-suse-linux/4.8.1/include/stddef.h" 1 3 4 # 212 "/opt/gcc/4.8.1/snos/lib/gcc/x86_64-suse-linux/4.8.1/include/stddef.h" 3 4 typedef long unsigned int size_t; # 34 "/usr/include/string.h" 2 3 4 extern void *memcpy (void *__restrict __dest, __const void *__restrict __src, size_t __n) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern void *memmove (void *__dest, __const void *__src, size_t __n) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern void *memccpy (void *__restrict __dest, __const void *__restrict __src, int __c, size_t __n) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern void *memset (void *__s, int __c, size_t __n) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int memcmp (__const void *__s1, __const void *__s2, size_t __n) __attribute__ ((__nothrow__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1, 2))); # 94 "/usr/include/string.h" 3 4 extern void *memchr (__const void *__s, int __c, size_t __n) __attribute__ ((__nothrow__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1))); # 125 "/usr/include/string.h" 3 4 extern char *strcpy (char *__restrict __dest, __const char *__restrict __src) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern char *strncpy (char *__restrict __dest, __const char *__restrict __src, size_t __n) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern char *strcat (char *__restrict __dest, __const char *__restrict __src) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern char *strncat (char *__restrict __dest, __const char *__restrict __src, size_t __n) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern int strcmp (__const char *__s1, __const char *__s2) __attribute__ ((__nothrow__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1, 2))); extern int strncmp (__const char *__s1, __const char *__s2, size_t __n) __attribute__ ((__nothrow__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1, 2))); extern int strcoll (__const char *__s1, __const char *__s2) __attribute__ ((__nothrow__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1, 2))); extern size_t strxfrm (char *__restrict __dest, __const char *__restrict __src, size_t __n) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (2))); # 1 "/usr/include/xlocale.h" 1 3 4 # 28 "/usr/include/xlocale.h" 3 4 typedef struct __locale_struct { struct locale_data *__locales[13]; const unsigned short int *__ctype_b; const int *__ctype_tolower; const int *__ctype_toupper; const char *__names[13]; } *__locale_t; typedef __locale_t locale_t; # 162 "/usr/include/string.h" 2 3 4 extern int strcoll_l (__const char *__s1, __const char *__s2, __locale_t __l) __attribute__ ((__nothrow__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1, 2, 3))); extern size_t strxfrm_l (char *__dest, __const char *__src, size_t __n, __locale_t __l) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (2, 4))); extern char *strdup (__const char *__s) __attribute__ ((__nothrow__)) __attribute__ ((__malloc__)) __attribute__ ((__nonnull__ (1))); extern char *strndup (__const char *__string, size_t __n) __attribute__ ((__nothrow__)) __attribute__ ((__malloc__)) __attribute__ ((__nonnull__ (1))); # 208 "/usr/include/string.h" 3 4 # 233 "/usr/include/string.h" 3 4 extern char *strchr (__const char *__s, int __c) __attribute__ ((__nothrow__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1))); # 260 "/usr/include/string.h" 3 4 extern char *strrchr (__const char *__s, int __c) __attribute__ ((__nothrow__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1))); # 279 "/usr/include/string.h" 3 4 extern size_t strcspn (__const char *__s, __const char *__reject) __attribute__ ((__nothrow__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1, 2))); extern size_t strspn (__const char *__s, __const char *__accept) __attribute__ ((__nothrow__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1, 2))); # 312 "/usr/include/string.h" 3 4 extern char *strpbrk (__const char *__s, __const char *__accept) __attribute__ ((__nothrow__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1, 2))); # 340 "/usr/include/string.h" 3 4 extern char *strstr (__const char *__haystack, __const char *__needle) __attribute__ ((__nothrow__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1, 2))); extern char *strtok (char *__restrict __s, __const char *__restrict __delim) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (2))); extern char *__strtok_r (char *__restrict __s, __const char *__restrict __delim, char **__restrict __save_ptr) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (2, 3))); extern char *strtok_r (char *__restrict __s, __const char *__restrict __delim, char **__restrict __save_ptr) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (2, 3))); # 395 "/usr/include/string.h" 3 4 extern size_t strlen (__const char *__s) __attribute__ ((__nothrow__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1))); extern size_t strnlen (__const char *__string, size_t __maxlen) __attribute__ ((__nothrow__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1))); extern char *strerror (int __errnum) __attribute__ ((__nothrow__)); # 425 "/usr/include/string.h" 3 4 extern int strerror_r (int __errnum, char *__buf, size_t __buflen) __asm__ ("" "__xpg_strerror_r") __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (2))); # 443 "/usr/include/string.h" 3 4 extern char *strerror_l (int __errnum, __locale_t __l) __attribute__ ((__nothrow__)); extern void __bzero (void *__s, size_t __n) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern void bcopy (__const void *__src, void *__dest, size_t __n) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern void bzero (void *__s, size_t __n) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int bcmp (__const void *__s1, __const void *__s2, size_t __n) __attribute__ ((__nothrow__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1, 2))); # 487 "/usr/include/string.h" 3 4 extern char *index (__const char *__s, int __c) __attribute__ ((__nothrow__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1))); # 515 "/usr/include/string.h" 3 4 extern char *rindex (__const char *__s, int __c) __attribute__ ((__nothrow__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1))); extern int ffs (int __i) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); # 534 "/usr/include/string.h" 3 4 extern int strcasecmp (__const char *__s1, __const char *__s2) __attribute__ ((__nothrow__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1, 2))); extern int strncasecmp (__const char *__s1, __const char *__s2, size_t __n) __attribute__ ((__nothrow__)) __attribute__ ((__pure__)) __attribute__ ((__nonnull__ (1, 2))); # 557 "/usr/include/string.h" 3 4 extern char *strsep (char **__restrict __stringp, __const char *__restrict __delim) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern char *strsignal (int __sig) __attribute__ ((__nothrow__)); extern char *__stpcpy (char *__restrict __dest, __const char *__restrict __src) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern char *stpcpy (char *__restrict __dest, __const char *__restrict __src) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern char *__stpncpy (char *__restrict __dest, __const char *__restrict __src, size_t __n) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); extern char *stpncpy (char *__restrict __dest, __const char *__restrict __src, size_t __n) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))); # 644 "/usr/include/string.h" 3 4 # 3 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 Defined "HAVE_STRING_H" to "1" ================================================================================ TEST check from config.headers(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/times.h sh: gcc -E -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c Executing: gcc -E -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c sh: # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" # 1 "" # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/confdefs.h" 1 # 2 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conffix.h" 1 # 3 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 # 1 "/usr/include/sys/times.h" 1 3 4 # 26 "/usr/include/sys/times.h" 3 4 # 1 "/usr/include/features.h" 1 3 4 # 347 "/usr/include/features.h" 3 4 # 1 "/usr/include/sys/cdefs.h" 1 3 4 # 353 "/usr/include/sys/cdefs.h" 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 354 "/usr/include/sys/cdefs.h" 2 3 4 # 348 "/usr/include/features.h" 2 3 4 # 371 "/usr/include/features.h" 3 4 # 1 "/usr/include/gnu/stubs.h" 1 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 5 "/usr/include/gnu/stubs.h" 2 3 4 # 1 "/usr/include/gnu/stubs-64.h" 1 3 4 # 10 "/usr/include/gnu/stubs.h" 2 3 4 # 372 "/usr/include/features.h" 2 3 4 # 27 "/usr/include/sys/times.h" 2 3 4 # 1 "/usr/include/time.h" 1 3 4 # 56 "/usr/include/time.h" 3 4 # 1 "/usr/include/bits/types.h" 1 3 4 # 28 "/usr/include/bits/types.h" 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 29 "/usr/include/bits/types.h" 2 3 4 typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; # 131 "/usr/include/bits/types.h" 3 4 # 1 "/usr/include/bits/typesizes.h" 1 3 4 # 132 "/usr/include/bits/types.h" 2 3 4 typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned long int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef long int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; # 57 "/usr/include/time.h" 2 3 4 typedef __clock_t clock_t; # 30 "/usr/include/sys/times.h" 2 3 4 struct tms { clock_t tms_utime; clock_t tms_stime; clock_t tms_cutime; clock_t tms_cstime; }; extern clock_t times (struct tms *__buffer) __attribute__ ((__nothrow__)); # 3 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 Defined "HAVE_SYS_TIMES_H" to "1" ================================================================================ TEST check from config.headers(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: io.h sh: gcc -E -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c Executing: gcc -E -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c sh: # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" # 1 "" # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/confdefs.h" 1 # 2 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conffix.h" 1 # 3 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 Possible ERROR while running preprocessor: /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c:3:16: fatal error: io.h: No such file or directory #include ^ compilation terminated. ret = 256 error message = {/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c:3:16: fatal error: io.h: No such file or directory #include ^ compilation terminated. } Source: #include "confdefs.h" #include "conffix.h" #include ================================================================================ TEST check from config.headers(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: stdint.h sh: gcc -E -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c Executing: gcc -E -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c sh: # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" # 1 "" # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/confdefs.h" 1 # 2 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conffix.h" 1 # 3 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 # 1 "/opt/gcc/4.8.1/snos/lib/gcc/x86_64-suse-linux/4.8.1/include/stdint.h" 1 3 4 # 9 "/opt/gcc/4.8.1/snos/lib/gcc/x86_64-suse-linux/4.8.1/include/stdint.h" 3 4 # 1 "/usr/include/stdint.h" 1 3 4 # 26 "/usr/include/stdint.h" 3 4 # 1 "/usr/include/features.h" 1 3 4 # 347 "/usr/include/features.h" 3 4 # 1 "/usr/include/sys/cdefs.h" 1 3 4 # 353 "/usr/include/sys/cdefs.h" 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 354 "/usr/include/sys/cdefs.h" 2 3 4 # 348 "/usr/include/features.h" 2 3 4 # 371 "/usr/include/features.h" 3 4 # 1 "/usr/include/gnu/stubs.h" 1 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 5 "/usr/include/gnu/stubs.h" 2 3 4 # 1 "/usr/include/gnu/stubs-64.h" 1 3 4 # 10 "/usr/include/gnu/stubs.h" 2 3 4 # 372 "/usr/include/features.h" 2 3 4 # 27 "/usr/include/stdint.h" 2 3 4 # 1 "/usr/include/bits/wchar.h" 1 3 4 # 28 "/usr/include/stdint.h" 2 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 29 "/usr/include/stdint.h" 2 3 4 # 37 "/usr/include/stdint.h" 3 4 typedef signed char int8_t; typedef short int int16_t; typedef int int32_t; typedef long int int64_t; typedef unsigned char uint8_t; typedef unsigned short int uint16_t; typedef unsigned int uint32_t; typedef unsigned long int uint64_t; # 66 "/usr/include/stdint.h" 3 4 typedef signed char int_least8_t; typedef short int int_least16_t; typedef int int_least32_t; typedef long int int_least64_t; typedef unsigned char uint_least8_t; typedef unsigned short int uint_least16_t; typedef unsigned int uint_least32_t; typedef unsigned long int uint_least64_t; # 91 "/usr/include/stdint.h" 3 4 typedef signed char int_fast8_t; typedef long int int_fast16_t; typedef long int int_fast32_t; typedef long int int_fast64_t; # 104 "/usr/include/stdint.h" 3 4 typedef unsigned char uint_fast8_t; typedef unsigned long int uint_fast16_t; typedef unsigned long int uint_fast32_t; typedef unsigned long int uint_fast64_t; # 120 "/usr/include/stdint.h" 3 4 typedef long int intptr_t; typedef unsigned long int uintptr_t; # 135 "/usr/include/stdint.h" 3 4 typedef long int intmax_t; typedef unsigned long int uintmax_t; # 10 "/opt/gcc/4.8.1/snos/lib/gcc/x86_64-suse-linux/4.8.1/include/stdint.h" 2 3 4 # 3 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 Defined "HAVE_STDINT_H" to "1" ================================================================================ TEST check from config.headers(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: pwd.h sh: gcc -E -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c Executing: gcc -E -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c sh: # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" # 1 "" # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/confdefs.h" 1 # 2 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conffix.h" 1 # 3 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 # 1 "/usr/include/pwd.h" 1 3 4 # 26 "/usr/include/pwd.h" 3 4 # 1 "/usr/include/features.h" 1 3 4 # 347 "/usr/include/features.h" 3 4 # 1 "/usr/include/sys/cdefs.h" 1 3 4 # 353 "/usr/include/sys/cdefs.h" 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 354 "/usr/include/sys/cdefs.h" 2 3 4 # 348 "/usr/include/features.h" 2 3 4 # 371 "/usr/include/features.h" 3 4 # 1 "/usr/include/gnu/stubs.h" 1 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 5 "/usr/include/gnu/stubs.h" 2 3 4 # 1 "/usr/include/gnu/stubs-64.h" 1 3 4 # 10 "/usr/include/gnu/stubs.h" 2 3 4 # 372 "/usr/include/features.h" 2 3 4 # 27 "/usr/include/pwd.h" 2 3 4 # 1 "/usr/include/bits/types.h" 1 3 4 # 28 "/usr/include/bits/types.h" 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 29 "/usr/include/bits/types.h" 2 3 4 typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; # 131 "/usr/include/bits/types.h" 3 4 # 1 "/usr/include/bits/typesizes.h" 1 3 4 # 132 "/usr/include/bits/types.h" 2 3 4 typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned long int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef long int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; # 31 "/usr/include/pwd.h" 2 3 4 # 1 "/opt/gcc/4.8.1/snos/lib/gcc/x86_64-suse-linux/4.8.1/include/stddef.h" 1 3 4 # 212 "/opt/gcc/4.8.1/snos/lib/gcc/x86_64-suse-linux/4.8.1/include/stddef.h" 3 4 typedef long unsigned int size_t; # 34 "/usr/include/pwd.h" 2 3 4 typedef __gid_t gid_t; typedef __uid_t uid_t; struct passwd { char *pw_name; char *pw_passwd; __uid_t pw_uid; __gid_t pw_gid; char *pw_gecos; char *pw_dir; char *pw_shell; }; # 1 "/usr/include/stdio.h" 1 3 4 # 45 "/usr/include/stdio.h" 3 4 struct _IO_FILE; typedef struct _IO_FILE FILE; # 65 "/usr/include/pwd.h" 2 3 4 # 73 "/usr/include/pwd.h" 3 4 extern void setpwent (void); extern void endpwent (void); extern struct passwd *getpwent (void); # 95 "/usr/include/pwd.h" 3 4 extern struct passwd *fgetpwent (FILE *__stream); extern int putpwent (__const struct passwd *__restrict __p, FILE *__restrict __f); extern struct passwd *getpwuid (__uid_t __uid); extern struct passwd *getpwnam (__const char *__name); # 140 "/usr/include/pwd.h" 3 4 extern int getpwent_r (struct passwd *__restrict __resultbuf, char *__restrict __buffer, size_t __buflen, struct passwd **__restrict __result); extern int getpwuid_r (__uid_t __uid, struct passwd *__restrict __resultbuf, char *__restrict __buffer, size_t __buflen, struct passwd **__restrict __result); extern int getpwnam_r (__const char *__restrict __name, struct passwd *__restrict __resultbuf, char *__restrict __buffer, size_t __buflen, struct passwd **__restrict __result); # 164 "/usr/include/pwd.h" 3 4 extern int fgetpwent_r (FILE *__restrict __stream, struct passwd *__restrict __resultbuf, char *__restrict __buffer, size_t __buflen, struct passwd **__restrict __result); # 184 "/usr/include/pwd.h" 3 4 # 3 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 Defined "HAVE_PWD_H" to "1" ================================================================================ TEST check from config.headers(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: float.h sh: gcc -E -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c Executing: gcc -E -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c sh: # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" # 1 "" # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/confdefs.h" 1 # 2 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conffix.h" 1 # 3 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 # 1 "/opt/gcc/4.8.1/snos/lib/gcc/x86_64-suse-linux/4.8.1/include/float.h" 1 3 4 # 3 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 Defined "HAVE_FLOAT_H" to "1" ================================================================================ TEST check from config.headers(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/param.h sh: gcc -E -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c Executing: gcc -E -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c sh: # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" # 1 "" # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/confdefs.h" 1 # 2 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conffix.h" 1 # 3 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 # 1 "/usr/include/sys/param.h" 1 3 4 # 26 "/usr/include/sys/param.h" 3 4 # 1 "/opt/gcc/4.8.1/snos/lib/gcc/x86_64-suse-linux/4.8.1/include-fixed/limits.h" 1 3 4 # 34 "/opt/gcc/4.8.1/snos/lib/gcc/x86_64-suse-linux/4.8.1/include-fixed/limits.h" 3 4 # 1 "/opt/gcc/4.8.1/snos/lib/gcc/x86_64-suse-linux/4.8.1/include-fixed/syslimits.h" 1 3 4 # 1 "/opt/gcc/4.8.1/snos/lib/gcc/x86_64-suse-linux/4.8.1/include-fixed/limits.h" 1 3 4 # 168 "/opt/gcc/4.8.1/snos/lib/gcc/x86_64-suse-linux/4.8.1/include-fixed/limits.h" 3 4 # 1 "/usr/include/limits.h" 1 3 4 # 27 "/usr/include/limits.h" 3 4 # 1 "/usr/include/features.h" 1 3 4 # 347 "/usr/include/features.h" 3 4 # 1 "/usr/include/sys/cdefs.h" 1 3 4 # 353 "/usr/include/sys/cdefs.h" 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 354 "/usr/include/sys/cdefs.h" 2 3 4 # 348 "/usr/include/features.h" 2 3 4 # 371 "/usr/include/features.h" 3 4 # 1 "/usr/include/gnu/stubs.h" 1 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 5 "/usr/include/gnu/stubs.h" 2 3 4 # 1 "/usr/include/gnu/stubs-64.h" 1 3 4 # 10 "/usr/include/gnu/stubs.h" 2 3 4 # 372 "/usr/include/features.h" 2 3 4 # 28 "/usr/include/limits.h" 2 3 4 # 145 "/usr/include/limits.h" 3 4 # 1 "/usr/include/bits/posix1_lim.h" 1 3 4 # 157 "/usr/include/bits/posix1_lim.h" 3 4 # 1 "/usr/include/bits/local_lim.h" 1 3 4 # 39 "/usr/include/bits/local_lim.h" 3 4 # 1 "/usr/include/linux/limits.h" 1 3 4 # 40 "/usr/include/bits/local_lim.h" 2 3 4 # 158 "/usr/include/bits/posix1_lim.h" 2 3 4 # 146 "/usr/include/limits.h" 2 3 4 # 1 "/usr/include/bits/posix2_lim.h" 1 3 4 # 150 "/usr/include/limits.h" 2 3 4 # 169 "/opt/gcc/4.8.1/snos/lib/gcc/x86_64-suse-linux/4.8.1/include-fixed/limits.h" 2 3 4 # 8 "/opt/gcc/4.8.1/snos/lib/gcc/x86_64-suse-linux/4.8.1/include-fixed/syslimits.h" 2 3 4 # 35 "/opt/gcc/4.8.1/snos/lib/gcc/x86_64-suse-linux/4.8.1/include-fixed/limits.h" 2 3 4 # 27 "/usr/include/sys/param.h" 2 3 4 # 1 "/usr/include/linux/param.h" 1 3 4 # 1 "/usr/include/asm/param.h" 1 3 4 # 1 "/usr/include/asm-generic/param.h" 1 3 4 # 1 "/usr/include/asm/param.h" 2 3 4 # 5 "/usr/include/linux/param.h" 2 3 4 # 29 "/usr/include/sys/param.h" 2 3 4 # 52 "/usr/include/sys/param.h" 3 4 # 1 "/usr/include/sys/types.h" 1 3 4 # 29 "/usr/include/sys/types.h" 3 4 # 1 "/usr/include/bits/types.h" 1 3 4 # 28 "/usr/include/bits/types.h" 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 29 "/usr/include/bits/types.h" 2 3 4 typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; # 131 "/usr/include/bits/types.h" 3 4 # 1 "/usr/include/bits/typesizes.h" 1 3 4 # 132 "/usr/include/bits/types.h" 2 3 4 typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned long int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef long int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; # 32 "/usr/include/sys/types.h" 2 3 4 typedef __u_char u_char; typedef __u_short u_short; typedef __u_int u_int; typedef __u_long u_long; typedef __quad_t quad_t; typedef __u_quad_t u_quad_t; typedef __fsid_t fsid_t; typedef __loff_t loff_t; typedef __ino_t ino_t; # 62 "/usr/include/sys/types.h" 3 4 typedef __dev_t dev_t; typedef __gid_t gid_t; typedef __mode_t mode_t; typedef __nlink_t nlink_t; typedef __uid_t uid_t; typedef __off_t off_t; # 100 "/usr/include/sys/types.h" 3 4 typedef __pid_t pid_t; typedef __id_t id_t; typedef __ssize_t ssize_t; typedef __daddr_t daddr_t; typedef __caddr_t caddr_t; typedef __key_t key_t; # 133 "/usr/include/sys/types.h" 3 4 # 1 "/usr/include/time.h" 1 3 4 # 74 "/usr/include/time.h" 3 4 typedef __time_t time_t; # 92 "/usr/include/time.h" 3 4 typedef __clockid_t clockid_t; # 104 "/usr/include/time.h" 3 4 typedef __timer_t timer_t; # 134 "/usr/include/sys/types.h" 2 3 4 # 147 "/usr/include/sys/types.h" 3 4 # 1 "/opt/gcc/4.8.1/snos/lib/gcc/x86_64-suse-linux/4.8.1/include/stddef.h" 1 3 4 # 212 "/opt/gcc/4.8.1/snos/lib/gcc/x86_64-suse-linux/4.8.1/include/stddef.h" 3 4 typedef long unsigned int size_t; # 148 "/usr/include/sys/types.h" 2 3 4 typedef unsigned long int ulong; typedef unsigned short int ushort; typedef unsigned int uint; # 195 "/usr/include/sys/types.h" 3 4 typedef int int8_t __attribute__ ((__mode__ (__QI__))); typedef int int16_t __attribute__ ((__mode__ (__HI__))); typedef int int32_t __attribute__ ((__mode__ (__SI__))); typedef int int64_t __attribute__ ((__mode__ (__DI__))); typedef unsigned int u_int8_t __attribute__ ((__mode__ (__QI__))); typedef unsigned int u_int16_t __attribute__ ((__mode__ (__HI__))); typedef unsigned int u_int32_t __attribute__ ((__mode__ (__SI__))); typedef unsigned int u_int64_t __attribute__ ((__mode__ (__DI__))); typedef int register_t __attribute__ ((__mode__ (__word__))); # 217 "/usr/include/sys/types.h" 3 4 # 1 "/usr/include/endian.h" 1 3 4 # 37 "/usr/include/endian.h" 3 4 # 1 "/usr/include/bits/endian.h" 1 3 4 # 38 "/usr/include/endian.h" 2 3 4 # 61 "/usr/include/endian.h" 3 4 # 1 "/usr/include/bits/byteswap.h" 1 3 4 # 28 "/usr/include/bits/byteswap.h" 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 29 "/usr/include/bits/byteswap.h" 2 3 4 # 62 "/usr/include/endian.h" 2 3 4 # 218 "/usr/include/sys/types.h" 2 3 4 # 1 "/usr/include/sys/select.h" 1 3 4 # 31 "/usr/include/sys/select.h" 3 4 # 1 "/usr/include/bits/select.h" 1 3 4 # 23 "/usr/include/bits/select.h" 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 24 "/usr/include/bits/select.h" 2 3 4 # 32 "/usr/include/sys/select.h" 2 3 4 # 1 "/usr/include/bits/sigset.h" 1 3 4 # 24 "/usr/include/bits/sigset.h" 3 4 typedef int __sig_atomic_t; typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; # 35 "/usr/include/sys/select.h" 2 3 4 typedef __sigset_t sigset_t; # 1 "/usr/include/time.h" 1 3 4 # 120 "/usr/include/time.h" 3 4 struct timespec { __time_t tv_sec; long int tv_nsec; }; # 45 "/usr/include/sys/select.h" 2 3 4 # 1 "/usr/include/bits/time.h" 1 3 4 # 69 "/usr/include/bits/time.h" 3 4 struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; # 47 "/usr/include/sys/select.h" 2 3 4 typedef __suseconds_t suseconds_t; typedef long int __fd_mask; # 67 "/usr/include/sys/select.h" 3 4 typedef struct { __fd_mask __fds_bits[1024 / (8 * (int) sizeof (__fd_mask))]; } fd_set; typedef __fd_mask fd_mask; # 99 "/usr/include/sys/select.h" 3 4 # 109 "/usr/include/sys/select.h" 3 4 extern int select (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, struct timeval *__restrict __timeout); # 121 "/usr/include/sys/select.h" 3 4 extern int pselect (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, const struct timespec *__restrict __timeout, const __sigset_t *__restrict __sigmask); # 221 "/usr/include/sys/types.h" 2 3 4 # 1 "/usr/include/sys/sysmacros.h" 1 3 4 # 30 "/usr/include/sys/sysmacros.h" 3 4 __extension__ extern unsigned int gnu_dev_major (unsigned long long int __dev) __attribute__ ((__nothrow__)); __extension__ extern unsigned int gnu_dev_minor (unsigned long long int __dev) __attribute__ ((__nothrow__)); __extension__ extern unsigned long long int gnu_dev_makedev (unsigned int __major, unsigned int __minor) __attribute__ ((__nothrow__)); # 224 "/usr/include/sys/types.h" 2 3 4 # 235 "/usr/include/sys/types.h" 3 4 typedef __blkcnt_t blkcnt_t; typedef __fsblkcnt_t fsblkcnt_t; typedef __fsfilcnt_t fsfilcnt_t; # 270 "/usr/include/sys/types.h" 3 4 # 1 "/usr/include/bits/pthreadtypes.h" 1 3 4 # 23 "/usr/include/bits/pthreadtypes.h" 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 24 "/usr/include/bits/pthreadtypes.h" 2 3 4 # 50 "/usr/include/bits/pthreadtypes.h" 3 4 typedef unsigned long int pthread_t; typedef union { char __size[56]; long int __align; } pthread_attr_t; typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; # 76 "/usr/include/bits/pthreadtypes.h" 3 4 typedef union { struct __pthread_mutex_s { int __lock; unsigned int __count; int __owner; unsigned int __nusers; int __kind; int __spins; __pthread_list_t __list; # 101 "/usr/include/bits/pthreadtypes.h" 3 4 } __data; char __size[40]; long int __align; } pthread_mutex_t; typedef union { char __size[4]; int __align; } pthread_mutexattr_t; typedef union { struct { int __lock; unsigned int __futex; __extension__ unsigned long long int __total_seq; __extension__ unsigned long long int __wakeup_seq; __extension__ unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; __extension__ long long int __align; } pthread_cond_t; typedef union { char __size[4]; int __align; } pthread_condattr_t; typedef unsigned int pthread_key_t; typedef int pthread_once_t; typedef union { struct { int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; unsigned int __flags; } __data; # 187 "/usr/include/bits/pthreadtypes.h" 3 4 char __size[56]; long int __align; } pthread_rwlock_t; typedef union { char __size[8]; long int __align; } pthread_rwlockattr_t; typedef volatile int pthread_spinlock_t; typedef union { char __size[32]; long int __align; } pthread_barrier_t; typedef union { char __size[4]; int __align; } pthread_barrierattr_t; # 271 "/usr/include/sys/types.h" 2 3 4 # 53 "/usr/include/sys/param.h" 2 3 4 # 3 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 Defined "HAVE_SYS_PARAM_H" to "1" ================================================================================ TEST check from config.headers(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: netdb.h sh: gcc -E -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c Executing: gcc -E -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c sh: # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" # 1 "" # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/confdefs.h" 1 # 2 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conffix.h" 1 # 3 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 # 1 "/usr/include/netdb.h" 1 3 4 # 26 "/usr/include/netdb.h" 3 4 # 1 "/usr/include/features.h" 1 3 4 # 347 "/usr/include/features.h" 3 4 # 1 "/usr/include/sys/cdefs.h" 1 3 4 # 353 "/usr/include/sys/cdefs.h" 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 354 "/usr/include/sys/cdefs.h" 2 3 4 # 348 "/usr/include/features.h" 2 3 4 # 371 "/usr/include/features.h" 3 4 # 1 "/usr/include/gnu/stubs.h" 1 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 5 "/usr/include/gnu/stubs.h" 2 3 4 # 1 "/usr/include/gnu/stubs-64.h" 1 3 4 # 10 "/usr/include/gnu/stubs.h" 2 3 4 # 372 "/usr/include/features.h" 2 3 4 # 27 "/usr/include/netdb.h" 2 3 4 # 1 "/usr/include/netinet/in.h" 1 3 4 # 24 "/usr/include/netinet/in.h" 3 4 # 1 "/opt/gcc/4.8.1/snos/lib/gcc/x86_64-suse-linux/4.8.1/include/stdint.h" 1 3 4 # 9 "/opt/gcc/4.8.1/snos/lib/gcc/x86_64-suse-linux/4.8.1/include/stdint.h" 3 4 # 1 "/usr/include/stdint.h" 1 3 4 # 27 "/usr/include/stdint.h" 3 4 # 1 "/usr/include/bits/wchar.h" 1 3 4 # 28 "/usr/include/stdint.h" 2 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 29 "/usr/include/stdint.h" 2 3 4 # 37 "/usr/include/stdint.h" 3 4 typedef signed char int8_t; typedef short int int16_t; typedef int int32_t; typedef long int int64_t; typedef unsigned char uint8_t; typedef unsigned short int uint16_t; typedef unsigned int uint32_t; typedef unsigned long int uint64_t; # 66 "/usr/include/stdint.h" 3 4 typedef signed char int_least8_t; typedef short int int_least16_t; typedef int int_least32_t; typedef long int int_least64_t; typedef unsigned char uint_least8_t; typedef unsigned short int uint_least16_t; typedef unsigned int uint_least32_t; typedef unsigned long int uint_least64_t; # 91 "/usr/include/stdint.h" 3 4 typedef signed char int_fast8_t; typedef long int int_fast16_t; typedef long int int_fast32_t; typedef long int int_fast64_t; # 104 "/usr/include/stdint.h" 3 4 typedef unsigned char uint_fast8_t; typedef unsigned long int uint_fast16_t; typedef unsigned long int uint_fast32_t; typedef unsigned long int uint_fast64_t; # 120 "/usr/include/stdint.h" 3 4 typedef long int intptr_t; typedef unsigned long int uintptr_t; # 135 "/usr/include/stdint.h" 3 4 typedef long int intmax_t; typedef unsigned long int uintmax_t; # 10 "/opt/gcc/4.8.1/snos/lib/gcc/x86_64-suse-linux/4.8.1/include/stdint.h" 2 3 4 # 25 "/usr/include/netinet/in.h" 2 3 4 # 1 "/usr/include/sys/socket.h" 1 3 4 # 26 "/usr/include/sys/socket.h" 3 4 # 1 "/usr/include/sys/uio.h" 1 3 4 # 24 "/usr/include/sys/uio.h" 3 4 # 1 "/usr/include/sys/types.h" 1 3 4 # 29 "/usr/include/sys/types.h" 3 4 # 1 "/usr/include/bits/types.h" 1 3 4 # 28 "/usr/include/bits/types.h" 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 29 "/usr/include/bits/types.h" 2 3 4 typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; # 131 "/usr/include/bits/types.h" 3 4 # 1 "/usr/include/bits/typesizes.h" 1 3 4 # 132 "/usr/include/bits/types.h" 2 3 4 typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned long int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef long int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; # 32 "/usr/include/sys/types.h" 2 3 4 typedef __u_char u_char; typedef __u_short u_short; typedef __u_int u_int; typedef __u_long u_long; typedef __quad_t quad_t; typedef __u_quad_t u_quad_t; typedef __fsid_t fsid_t; typedef __loff_t loff_t; typedef __ino_t ino_t; # 62 "/usr/include/sys/types.h" 3 4 typedef __dev_t dev_t; typedef __gid_t gid_t; typedef __mode_t mode_t; typedef __nlink_t nlink_t; typedef __uid_t uid_t; typedef __off_t off_t; # 100 "/usr/include/sys/types.h" 3 4 typedef __pid_t pid_t; typedef __id_t id_t; typedef __ssize_t ssize_t; typedef __daddr_t daddr_t; typedef __caddr_t caddr_t; typedef __key_t key_t; # 133 "/usr/include/sys/types.h" 3 4 # 1 "/usr/include/time.h" 1 3 4 # 74 "/usr/include/time.h" 3 4 typedef __time_t time_t; # 92 "/usr/include/time.h" 3 4 typedef __clockid_t clockid_t; # 104 "/usr/include/time.h" 3 4 typedef __timer_t timer_t; # 134 "/usr/include/sys/types.h" 2 3 4 # 147 "/usr/include/sys/types.h" 3 4 # 1 "/opt/gcc/4.8.1/snos/lib/gcc/x86_64-suse-linux/4.8.1/include/stddef.h" 1 3 4 # 212 "/opt/gcc/4.8.1/snos/lib/gcc/x86_64-suse-linux/4.8.1/include/stddef.h" 3 4 typedef long unsigned int size_t; # 148 "/usr/include/sys/types.h" 2 3 4 typedef unsigned long int ulong; typedef unsigned short int ushort; typedef unsigned int uint; # 201 "/usr/include/sys/types.h" 3 4 typedef unsigned int u_int8_t __attribute__ ((__mode__ (__QI__))); typedef unsigned int u_int16_t __attribute__ ((__mode__ (__HI__))); typedef unsigned int u_int32_t __attribute__ ((__mode__ (__SI__))); typedef unsigned int u_int64_t __attribute__ ((__mode__ (__DI__))); typedef int register_t __attribute__ ((__mode__ (__word__))); # 217 "/usr/include/sys/types.h" 3 4 # 1 "/usr/include/endian.h" 1 3 4 # 37 "/usr/include/endian.h" 3 4 # 1 "/usr/include/bits/endian.h" 1 3 4 # 38 "/usr/include/endian.h" 2 3 4 # 61 "/usr/include/endian.h" 3 4 # 1 "/usr/include/bits/byteswap.h" 1 3 4 # 28 "/usr/include/bits/byteswap.h" 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 29 "/usr/include/bits/byteswap.h" 2 3 4 # 62 "/usr/include/endian.h" 2 3 4 # 218 "/usr/include/sys/types.h" 2 3 4 # 1 "/usr/include/sys/select.h" 1 3 4 # 31 "/usr/include/sys/select.h" 3 4 # 1 "/usr/include/bits/select.h" 1 3 4 # 23 "/usr/include/bits/select.h" 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 24 "/usr/include/bits/select.h" 2 3 4 # 32 "/usr/include/sys/select.h" 2 3 4 # 1 "/usr/include/bits/sigset.h" 1 3 4 # 24 "/usr/include/bits/sigset.h" 3 4 typedef int __sig_atomic_t; typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; # 35 "/usr/include/sys/select.h" 2 3 4 typedef __sigset_t sigset_t; # 1 "/usr/include/time.h" 1 3 4 # 120 "/usr/include/time.h" 3 4 struct timespec { __time_t tv_sec; long int tv_nsec; }; # 45 "/usr/include/sys/select.h" 2 3 4 # 1 "/usr/include/bits/time.h" 1 3 4 # 69 "/usr/include/bits/time.h" 3 4 struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; # 47 "/usr/include/sys/select.h" 2 3 4 typedef __suseconds_t suseconds_t; typedef long int __fd_mask; # 67 "/usr/include/sys/select.h" 3 4 typedef struct { __fd_mask __fds_bits[1024 / (8 * (int) sizeof (__fd_mask))]; } fd_set; typedef __fd_mask fd_mask; # 99 "/usr/include/sys/select.h" 3 4 # 109 "/usr/include/sys/select.h" 3 4 extern int select (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, struct timeval *__restrict __timeout); # 121 "/usr/include/sys/select.h" 3 4 extern int pselect (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, const struct timespec *__restrict __timeout, const __sigset_t *__restrict __sigmask); # 221 "/usr/include/sys/types.h" 2 3 4 # 1 "/usr/include/sys/sysmacros.h" 1 3 4 # 30 "/usr/include/sys/sysmacros.h" 3 4 __extension__ extern unsigned int gnu_dev_major (unsigned long long int __dev) __attribute__ ((__nothrow__)); __extension__ extern unsigned int gnu_dev_minor (unsigned long long int __dev) __attribute__ ((__nothrow__)); __extension__ extern unsigned long long int gnu_dev_makedev (unsigned int __major, unsigned int __minor) __attribute__ ((__nothrow__)); # 224 "/usr/include/sys/types.h" 2 3 4 # 235 "/usr/include/sys/types.h" 3 4 typedef __blkcnt_t blkcnt_t; typedef __fsblkcnt_t fsblkcnt_t; typedef __fsfilcnt_t fsfilcnt_t; # 270 "/usr/include/sys/types.h" 3 4 # 1 "/usr/include/bits/pthreadtypes.h" 1 3 4 # 23 "/usr/include/bits/pthreadtypes.h" 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 24 "/usr/include/bits/pthreadtypes.h" 2 3 4 # 50 "/usr/include/bits/pthreadtypes.h" 3 4 typedef unsigned long int pthread_t; typedef union { char __size[56]; long int __align; } pthread_attr_t; typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; # 76 "/usr/include/bits/pthreadtypes.h" 3 4 typedef union { struct __pthread_mutex_s { int __lock; unsigned int __count; int __owner; unsigned int __nusers; int __kind; int __spins; __pthread_list_t __list; # 101 "/usr/include/bits/pthreadtypes.h" 3 4 } __data; char __size[40]; long int __align; } pthread_mutex_t; typedef union { char __size[4]; int __align; } pthread_mutexattr_t; typedef union { struct { int __lock; unsigned int __futex; __extension__ unsigned long long int __total_seq; __extension__ unsigned long long int __wakeup_seq; __extension__ unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; __extension__ long long int __align; } pthread_cond_t; typedef union { char __size[4]; int __align; } pthread_condattr_t; typedef unsigned int pthread_key_t; typedef int pthread_once_t; typedef union { struct { int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; unsigned int __flags; } __data; # 187 "/usr/include/bits/pthreadtypes.h" 3 4 char __size[56]; long int __align; } pthread_rwlock_t; typedef union { char __size[8]; long int __align; } pthread_rwlockattr_t; typedef volatile int pthread_spinlock_t; typedef union { char __size[32]; long int __align; } pthread_barrier_t; typedef union { char __size[4]; int __align; } pthread_barrierattr_t; # 271 "/usr/include/sys/types.h" 2 3 4 # 25 "/usr/include/sys/uio.h" 2 3 4 # 1 "/usr/include/bits/uio.h" 1 3 4 # 44 "/usr/include/bits/uio.h" 3 4 struct iovec { void *iov_base; size_t iov_len; }; # 30 "/usr/include/sys/uio.h" 2 3 4 # 40 "/usr/include/sys/uio.h" 3 4 extern ssize_t readv (int __fd, __const struct iovec *__iovec, int __count) ; # 51 "/usr/include/sys/uio.h" 3 4 extern ssize_t writev (int __fd, __const struct iovec *__iovec, int __count) ; # 66 "/usr/include/sys/uio.h" 3 4 extern ssize_t preadv (int __fd, __const struct iovec *__iovec, int __count, __off_t __offset) ; # 78 "/usr/include/sys/uio.h" 3 4 extern ssize_t pwritev (int __fd, __const struct iovec *__iovec, int __count, __off_t __offset) ; # 121 "/usr/include/sys/uio.h" 3 4 # 29 "/usr/include/sys/socket.h" 2 3 4 # 1 "/opt/gcc/4.8.1/snos/lib/gcc/x86_64-suse-linux/4.8.1/include/stddef.h" 1 3 4 # 31 "/usr/include/sys/socket.h" 2 3 4 # 40 "/usr/include/sys/socket.h" 3 4 # 1 "/usr/include/bits/socket.h" 1 3 4 # 29 "/usr/include/bits/socket.h" 3 4 # 1 "/opt/gcc/4.8.1/snos/lib/gcc/x86_64-suse-linux/4.8.1/include/stddef.h" 1 3 4 # 30 "/usr/include/bits/socket.h" 2 3 4 typedef __socklen_t socklen_t; enum __socket_type { SOCK_STREAM = 1, SOCK_DGRAM = 2, SOCK_RAW = 3, SOCK_RDM = 4, SOCK_SEQPACKET = 5, SOCK_DCCP = 6, SOCK_PACKET = 10, SOCK_CLOEXEC = 02000000, SOCK_NONBLOCK = 04000 }; # 175 "/usr/include/bits/socket.h" 3 4 # 1 "/usr/include/bits/sockaddr.h" 1 3 4 # 29 "/usr/include/bits/sockaddr.h" 3 4 typedef unsigned short int sa_family_t; # 176 "/usr/include/bits/socket.h" 2 3 4 struct sockaddr { sa_family_t sa_family; char sa_data[14]; }; # 191 "/usr/include/bits/socket.h" 3 4 struct sockaddr_storage { sa_family_t ss_family; unsigned long int __ss_align; char __ss_padding[(128 - (2 * sizeof (unsigned long int)))]; }; enum { MSG_OOB = 0x01, MSG_PEEK = 0x02, MSG_DONTROUTE = 0x04, MSG_CTRUNC = 0x08, MSG_PROXY = 0x10, MSG_TRUNC = 0x20, MSG_DONTWAIT = 0x40, MSG_EOR = 0x80, MSG_WAITALL = 0x100, MSG_FIN = 0x200, MSG_SYN = 0x400, MSG_CONFIRM = 0x800, MSG_RST = 0x1000, MSG_ERRQUEUE = 0x2000, MSG_NOSIGNAL = 0x4000, MSG_MORE = 0x8000, MSG_CMSG_CLOEXEC = 0x40000000 }; struct msghdr { void *msg_name; socklen_t msg_namelen; struct iovec *msg_iov; size_t msg_iovlen; void *msg_control; size_t msg_controllen; int msg_flags; }; struct cmsghdr { size_t cmsg_len; int cmsg_level; int cmsg_type; __extension__ unsigned char __cmsg_data []; }; # 297 "/usr/include/bits/socket.h" 3 4 extern struct cmsghdr *__cmsg_nxthdr (struct msghdr *__mhdr, struct cmsghdr *__cmsg) __attribute__ ((__nothrow__)); # 324 "/usr/include/bits/socket.h" 3 4 enum { SCM_RIGHTS = 0x01 }; # 370 "/usr/include/bits/socket.h" 3 4 # 1 "/usr/include/asm/socket.h" 1 3 4 # 1 "/usr/include/asm-generic/socket.h" 1 3 4 # 1 "/usr/include/asm/sockios.h" 1 3 4 # 1 "/usr/include/asm-generic/sockios.h" 1 3 4 # 1 "/usr/include/asm/sockios.h" 2 3 4 # 5 "/usr/include/asm-generic/socket.h" 2 3 4 # 1 "/usr/include/asm/socket.h" 2 3 4 # 371 "/usr/include/bits/socket.h" 2 3 4 # 404 "/usr/include/bits/socket.h" 3 4 struct linger { int l_onoff; int l_linger; }; # 41 "/usr/include/sys/socket.h" 2 3 4 struct osockaddr { unsigned short int sa_family; unsigned char sa_data[14]; }; enum { SHUT_RD = 0, SHUT_WR, SHUT_RDWR }; # 105 "/usr/include/sys/socket.h" 3 4 extern int socket (int __domain, int __type, int __protocol) __attribute__ ((__nothrow__)); extern int socketpair (int __domain, int __type, int __protocol, int __fds[2]) __attribute__ ((__nothrow__)); extern int bind (int __fd, __const struct sockaddr * __addr, socklen_t __len) __attribute__ ((__nothrow__)); extern int getsockname (int __fd, struct sockaddr *__restrict __addr, socklen_t *__restrict __len) __attribute__ ((__nothrow__)); # 129 "/usr/include/sys/socket.h" 3 4 extern int connect (int __fd, __const struct sockaddr * __addr, socklen_t __len); extern int getpeername (int __fd, struct sockaddr *__restrict __addr, socklen_t *__restrict __len) __attribute__ ((__nothrow__)); extern ssize_t send (int __fd, __const void *__buf, size_t __n, int __flags); extern ssize_t recv (int __fd, void *__buf, size_t __n, int __flags); extern ssize_t sendto (int __fd, __const void *__buf, size_t __n, int __flags, __const struct sockaddr * __addr, socklen_t __addr_len); # 166 "/usr/include/sys/socket.h" 3 4 extern ssize_t recvfrom (int __fd, void *__restrict __buf, size_t __n, int __flags, struct sockaddr *__restrict __addr, socklen_t *__restrict __addr_len); extern ssize_t sendmsg (int __fd, __const struct msghdr *__message, int __flags); extern ssize_t recvmsg (int __fd, struct msghdr *__message, int __flags); extern int getsockopt (int __fd, int __level, int __optname, void *__restrict __optval, socklen_t *__restrict __optlen) __attribute__ ((__nothrow__)); extern int setsockopt (int __fd, int __level, int __optname, __const void *__optval, socklen_t __optlen) __attribute__ ((__nothrow__)); extern int listen (int __fd, int __n) __attribute__ ((__nothrow__)); # 214 "/usr/include/sys/socket.h" 3 4 extern int accept (int __fd, struct sockaddr *__restrict __addr, socklen_t *__restrict __addr_len); # 232 "/usr/include/sys/socket.h" 3 4 extern int shutdown (int __fd, int __how) __attribute__ ((__nothrow__)); extern int sockatmark (int __fd) __attribute__ ((__nothrow__)); extern int isfdtype (int __fd, int __fdtype) __attribute__ ((__nothrow__)); # 254 "/usr/include/sys/socket.h" 3 4 # 26 "/usr/include/netinet/in.h" 2 3 4 enum { IPPROTO_IP = 0, IPPROTO_HOPOPTS = 0, IPPROTO_ICMP = 1, IPPROTO_IGMP = 2, IPPROTO_IPIP = 4, IPPROTO_TCP = 6, IPPROTO_EGP = 8, IPPROTO_PUP = 12, IPPROTO_UDP = 17, IPPROTO_IDP = 22, IPPROTO_TP = 29, IPPROTO_DCCP = 33, IPPROTO_IPV6 = 41, IPPROTO_ROUTING = 43, IPPROTO_FRAGMENT = 44, IPPROTO_RSVP = 46, IPPROTO_GRE = 47, IPPROTO_ESP = 50, IPPROTO_AH = 51, IPPROTO_ICMPV6 = 58, IPPROTO_NONE = 59, IPPROTO_DSTOPTS = 60, IPPROTO_MTP = 92, IPPROTO_ENCAP = 98, IPPROTO_PIM = 103, IPPROTO_COMP = 108, IPPROTO_SCTP = 132, IPPROTO_UDPLITE = 136, IPPROTO_RAW = 255, IPPROTO_MAX }; typedef uint16_t in_port_t; enum { IPPORT_ECHO = 7, IPPORT_DISCARD = 9, IPPORT_SYSTAT = 11, IPPORT_DAYTIME = 13, IPPORT_NETSTAT = 15, IPPORT_FTP = 21, IPPORT_TELNET = 23, IPPORT_SMTP = 25, IPPORT_TIMESERVER = 37, IPPORT_NAMESERVER = 42, IPPORT_WHOIS = 43, IPPORT_MTP = 57, IPPORT_TFTP = 69, IPPORT_RJE = 77, IPPORT_FINGER = 79, IPPORT_TTYLINK = 87, IPPORT_SUPDUP = 95, IPPORT_EXECSERVER = 512, IPPORT_LOGINSERVER = 513, IPPORT_CMDSERVER = 514, IPPORT_EFSSERVER = 520, IPPORT_BIFFUDP = 512, IPPORT_WHOSERVER = 513, IPPORT_ROUTESERVER = 520, IPPORT_RESERVED = 1024, IPPORT_USERRESERVED = 5000 }; typedef uint32_t in_addr_t; struct in_addr { in_addr_t s_addr; }; # 198 "/usr/include/netinet/in.h" 3 4 struct in6_addr { union { uint8_t __u6_addr8[16]; uint16_t __u6_addr16[8]; uint32_t __u6_addr32[4]; } __in6_u; }; extern const struct in6_addr in6addr_any; extern const struct in6_addr in6addr_loopback; # 225 "/usr/include/netinet/in.h" 3 4 struct sockaddr_in { sa_family_t sin_family; in_port_t sin_port; struct in_addr sin_addr; unsigned char sin_zero[sizeof (struct sockaddr) - (sizeof (unsigned short int)) - sizeof (in_port_t) - sizeof (struct in_addr)]; }; struct sockaddr_in6 { sa_family_t sin6_family; in_port_t sin6_port; uint32_t sin6_flowinfo; struct in6_addr sin6_addr; uint32_t sin6_scope_id; }; struct ip_mreq { struct in_addr imr_multiaddr; struct in_addr imr_interface; }; struct ip_mreq_source { struct in_addr imr_multiaddr; struct in_addr imr_interface; struct in_addr imr_sourceaddr; }; struct ipv6_mreq { struct in6_addr ipv6mr_multiaddr; unsigned int ipv6mr_interface; }; struct group_req { uint32_t gr_interface; struct sockaddr_storage gr_group; }; struct group_source_req { uint32_t gsr_interface; struct sockaddr_storage gsr_group; struct sockaddr_storage gsr_source; }; struct ip_msfilter { struct in_addr imsf_multiaddr; struct in_addr imsf_interface; uint32_t imsf_fmode; uint32_t imsf_numsrc; struct in_addr imsf_slist[1]; }; struct group_filter { uint32_t gf_interface; struct sockaddr_storage gf_group; uint32_t gf_fmode; uint32_t gf_numsrc; struct sockaddr_storage gf_slist[1]; }; # 356 "/usr/include/netinet/in.h" 3 4 # 1 "/usr/include/bits/in.h" 1 3 4 # 86 "/usr/include/bits/in.h" 3 4 struct ip_opts { struct in_addr ip_dst; char ip_opts[40]; }; struct ip_mreqn { struct in_addr imr_multiaddr; struct in_addr imr_address; int imr_ifindex; }; struct in_pktinfo { int ipi_ifindex; struct in_addr ipi_spec_dst; struct in_addr ipi_addr; }; # 357 "/usr/include/netinet/in.h" 2 3 4 # 365 "/usr/include/netinet/in.h" 3 4 extern uint32_t ntohl (uint32_t __netlong) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern uint16_t ntohs (uint16_t __netshort) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern uint32_t htonl (uint32_t __hostlong) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern uint16_t htons (uint16_t __hostshort) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); # 1 "/usr/include/bits/byteswap.h" 1 3 4 # 377 "/usr/include/netinet/in.h" 2 3 4 # 440 "/usr/include/netinet/in.h" 3 4 extern int bindresvport (int __sockfd, struct sockaddr_in *__sock_in) __attribute__ ((__nothrow__)); extern int bindresvport6 (int __sockfd, struct sockaddr_in6 *__sock_in) __attribute__ ((__nothrow__)); # 565 "/usr/include/netinet/in.h" 3 4 # 29 "/usr/include/netdb.h" 2 3 4 # 1 "/usr/include/rpc/netdb.h" 1 3 4 # 42 "/usr/include/rpc/netdb.h" 3 4 # 1 "/opt/gcc/4.8.1/snos/lib/gcc/x86_64-suse-linux/4.8.1/include/stddef.h" 1 3 4 # 43 "/usr/include/rpc/netdb.h" 2 3 4 struct rpcent { char *r_name; char **r_aliases; int r_number; }; extern void setrpcent (int __stayopen) __attribute__ ((__nothrow__)); extern void endrpcent (void) __attribute__ ((__nothrow__)); extern struct rpcent *getrpcbyname (__const char *__name) __attribute__ ((__nothrow__)); extern struct rpcent *getrpcbynumber (int __number) __attribute__ ((__nothrow__)); extern struct rpcent *getrpcent (void) __attribute__ ((__nothrow__)); extern int getrpcbyname_r (__const char *__name, struct rpcent *__result_buf, char *__buffer, size_t __buflen, struct rpcent **__result) __attribute__ ((__nothrow__)); extern int getrpcbynumber_r (int __number, struct rpcent *__result_buf, char *__buffer, size_t __buflen, struct rpcent **__result) __attribute__ ((__nothrow__)); extern int getrpcent_r (struct rpcent *__result_buf, char *__buffer, size_t __buflen, struct rpcent **__result) __attribute__ ((__nothrow__)); # 34 "/usr/include/netdb.h" 2 3 4 # 43 "/usr/include/netdb.h" 3 4 # 1 "/usr/include/bits/netdb.h" 1 3 4 # 27 "/usr/include/bits/netdb.h" 3 4 struct netent { char *n_name; char **n_aliases; int n_addrtype; uint32_t n_net; }; # 44 "/usr/include/netdb.h" 2 3 4 # 54 "/usr/include/netdb.h" 3 4 extern int *__h_errno_location (void) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); # 91 "/usr/include/netdb.h" 3 4 extern void herror (__const char *__str) __attribute__ ((__nothrow__)); extern __const char *hstrerror (int __err_num) __attribute__ ((__nothrow__)); struct hostent { char *h_name; char **h_aliases; int h_addrtype; int h_length; char **h_addr_list; }; extern void sethostent (int __stay_open); extern void endhostent (void); extern struct hostent *gethostent (void); extern struct hostent *gethostbyaddr (__const void *__addr, __socklen_t __len, int __type); extern struct hostent *gethostbyname (__const char *__name); # 154 "/usr/include/netdb.h" 3 4 extern struct hostent *gethostbyname2 (__const char *__name, int __af); # 166 "/usr/include/netdb.h" 3 4 extern int gethostent_r (struct hostent *__restrict __result_buf, char *__restrict __buf, size_t __buflen, struct hostent **__restrict __result, int *__restrict __h_errnop); extern int gethostbyaddr_r (__const void *__restrict __addr, __socklen_t __len, int __type, struct hostent *__restrict __result_buf, char *__restrict __buf, size_t __buflen, struct hostent **__restrict __result, int *__restrict __h_errnop); extern int gethostbyname_r (__const char *__restrict __name, struct hostent *__restrict __result_buf, char *__restrict __buf, size_t __buflen, struct hostent **__restrict __result, int *__restrict __h_errnop); extern int gethostbyname2_r (__const char *__restrict __name, int __af, struct hostent *__restrict __result_buf, char *__restrict __buf, size_t __buflen, struct hostent **__restrict __result, int *__restrict __h_errnop); # 197 "/usr/include/netdb.h" 3 4 extern void setnetent (int __stay_open); extern void endnetent (void); extern struct netent *getnetent (void); extern struct netent *getnetbyaddr (uint32_t __net, int __type); extern struct netent *getnetbyname (__const char *__name); # 236 "/usr/include/netdb.h" 3 4 extern int getnetent_r (struct netent *__restrict __result_buf, char *__restrict __buf, size_t __buflen, struct netent **__restrict __result, int *__restrict __h_errnop); extern int getnetbyaddr_r (uint32_t __net, int __type, struct netent *__restrict __result_buf, char *__restrict __buf, size_t __buflen, struct netent **__restrict __result, int *__restrict __h_errnop); extern int getnetbyname_r (__const char *__restrict __name, struct netent *__restrict __result_buf, char *__restrict __buf, size_t __buflen, struct netent **__restrict __result, int *__restrict __h_errnop); struct servent { char *s_name; char **s_aliases; int s_port; char *s_proto; }; extern void setservent (int __stay_open); extern void endservent (void); extern struct servent *getservent (void); extern struct servent *getservbyname (__const char *__name, __const char *__proto); extern struct servent *getservbyport (int __port, __const char *__proto); # 308 "/usr/include/netdb.h" 3 4 extern int getservent_r (struct servent *__restrict __result_buf, char *__restrict __buf, size_t __buflen, struct servent **__restrict __result); extern int getservbyname_r (__const char *__restrict __name, __const char *__restrict __proto, struct servent *__restrict __result_buf, char *__restrict __buf, size_t __buflen, struct servent **__restrict __result); extern int getservbyport_r (int __port, __const char *__restrict __proto, struct servent *__restrict __result_buf, char *__restrict __buf, size_t __buflen, struct servent **__restrict __result); struct protoent { char *p_name; char **p_aliases; int p_proto; }; extern void setprotoent (int __stay_open); extern void endprotoent (void); extern struct protoent *getprotoent (void); extern struct protoent *getprotobyname (__const char *__name); extern struct protoent *getprotobynumber (int __proto); # 374 "/usr/include/netdb.h" 3 4 extern int getprotoent_r (struct protoent *__restrict __result_buf, char *__restrict __buf, size_t __buflen, struct protoent **__restrict __result); extern int getprotobyname_r (__const char *__restrict __name, struct protoent *__restrict __result_buf, char *__restrict __buf, size_t __buflen, struct protoent **__restrict __result); extern int getprotobynumber_r (int __proto, struct protoent *__restrict __result_buf, char *__restrict __buf, size_t __buflen, struct protoent **__restrict __result); # 395 "/usr/include/netdb.h" 3 4 extern int setnetgrent (__const char *__netgroup); extern void endnetgrent (void); # 412 "/usr/include/netdb.h" 3 4 extern int getnetgrent (char **__restrict __hostp, char **__restrict __userp, char **__restrict __domainp); # 423 "/usr/include/netdb.h" 3 4 extern int innetgr (__const char *__netgroup, __const char *__host, __const char *__user, __const char *__domain); extern int getnetgrent_r (char **__restrict __hostp, char **__restrict __userp, char **__restrict __domainp, char *__restrict __buffer, size_t __buflen); # 451 "/usr/include/netdb.h" 3 4 extern int rcmd (char **__restrict __ahost, unsigned short int __rport, __const char *__restrict __locuser, __const char *__restrict __remuser, __const char *__restrict __cmd, int *__restrict __fd2p); # 463 "/usr/include/netdb.h" 3 4 extern int rcmd_af (char **__restrict __ahost, unsigned short int __rport, __const char *__restrict __locuser, __const char *__restrict __remuser, __const char *__restrict __cmd, int *__restrict __fd2p, sa_family_t __af); # 479 "/usr/include/netdb.h" 3 4 extern int rexec (char **__restrict __ahost, int __rport, __const char *__restrict __name, __const char *__restrict __pass, __const char *__restrict __cmd, int *__restrict __fd2p); # 491 "/usr/include/netdb.h" 3 4 extern int rexec_af (char **__restrict __ahost, int __rport, __const char *__restrict __name, __const char *__restrict __pass, __const char *__restrict __cmd, int *__restrict __fd2p, sa_family_t __af); # 505 "/usr/include/netdb.h" 3 4 extern int ruserok (__const char *__rhost, int __suser, __const char *__remuser, __const char *__locuser); # 515 "/usr/include/netdb.h" 3 4 extern int ruserok_af (__const char *__rhost, int __suser, __const char *__remuser, __const char *__locuser, sa_family_t __af); # 528 "/usr/include/netdb.h" 3 4 extern int iruserok (uint32_t __raddr, int __suser, __const char *__remuser, __const char *__locuser); # 539 "/usr/include/netdb.h" 3 4 extern int iruserok_af (__const void *__raddr, int __suser, __const char *__remuser, __const char *__locuser, sa_family_t __af); # 551 "/usr/include/netdb.h" 3 4 extern int rresvport (int *__alport); # 560 "/usr/include/netdb.h" 3 4 extern int rresvport_af (int *__alport, sa_family_t __af); struct addrinfo { int ai_flags; int ai_family; int ai_socktype; int ai_protocol; socklen_t ai_addrlen; struct sockaddr *ai_addr; char *ai_canonname; struct addrinfo *ai_next; }; # 662 "/usr/include/netdb.h" 3 4 extern int getaddrinfo (__const char *__restrict __name, __const char *__restrict __service, __const struct addrinfo *__restrict __req, struct addrinfo **__restrict __pai); extern void freeaddrinfo (struct addrinfo *__ai) __attribute__ ((__nothrow__)); extern __const char *gai_strerror (int __ecode) __attribute__ ((__nothrow__)); extern int getnameinfo (__const struct sockaddr *__restrict __sa, socklen_t __salen, char *__restrict __host, socklen_t __hostlen, char *__restrict __serv, socklen_t __servlen, int __flags); # 713 "/usr/include/netdb.h" 3 4 # 3 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 Defined "HAVE_NETDB_H" to "1" ================================================================================ TEST check from config.headers(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: search.h sh: gcc -E -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c Executing: gcc -E -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c sh: # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" # 1 "" # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/confdefs.h" 1 # 2 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conffix.h" 1 # 3 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 # 1 "/usr/include/search.h" 1 3 4 # 23 "/usr/include/search.h" 3 4 # 1 "/usr/include/features.h" 1 3 4 # 347 "/usr/include/features.h" 3 4 # 1 "/usr/include/sys/cdefs.h" 1 3 4 # 353 "/usr/include/sys/cdefs.h" 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 354 "/usr/include/sys/cdefs.h" 2 3 4 # 348 "/usr/include/features.h" 2 3 4 # 371 "/usr/include/features.h" 3 4 # 1 "/usr/include/gnu/stubs.h" 1 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 5 "/usr/include/gnu/stubs.h" 2 3 4 # 1 "/usr/include/gnu/stubs-64.h" 1 3 4 # 10 "/usr/include/gnu/stubs.h" 2 3 4 # 372 "/usr/include/features.h" 2 3 4 # 24 "/usr/include/search.h" 2 3 4 # 1 "/opt/gcc/4.8.1/snos/lib/gcc/x86_64-suse-linux/4.8.1/include/stddef.h" 1 3 4 # 212 "/opt/gcc/4.8.1/snos/lib/gcc/x86_64-suse-linux/4.8.1/include/stddef.h" 3 4 typedef long unsigned int size_t; # 27 "/usr/include/search.h" 2 3 4 # 45 "/usr/include/search.h" 3 4 extern void insque (void *__elem, void *__prev) __attribute__ ((__nothrow__)); extern void remque (void *__elem) __attribute__ ((__nothrow__)); typedef int (*__compar_fn_t) (__const void *, __const void *); typedef enum { FIND, ENTER } ACTION; typedef struct entry { char *key; void *data; } ENTRY; struct _ENTRY; # 88 "/usr/include/search.h" 3 4 extern ENTRY *hsearch (ENTRY __item, ACTION __action) __attribute__ ((__nothrow__)); extern int hcreate (size_t __nel) __attribute__ ((__nothrow__)); extern void hdestroy (void) __attribute__ ((__nothrow__)); # 119 "/usr/include/search.h" 3 4 typedef enum { preorder, postorder, endorder, leaf } VISIT; extern void *tsearch (__const void *__key, void **__rootp, __compar_fn_t __compar); extern void *tfind (__const void *__key, void *__const *__rootp, __compar_fn_t __compar); extern void *tdelete (__const void *__restrict __key, void **__restrict __rootp, __compar_fn_t __compar); typedef void (*__action_fn_t) (__const void *__nodep, VISIT __value, int __level); extern void twalk (__const void *__root, __action_fn_t __action); # 165 "/usr/include/search.h" 3 4 extern void *lfind (__const void *__key, __const void *__base, size_t *__nmemb, size_t __size, __compar_fn_t __compar); extern void *lsearch (__const void *__key, void *__base, size_t *__nmemb, size_t __size, __compar_fn_t __compar); # 3 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 Defined "HAVE_SEARCH_H" to "1" ================================================================================ TEST check from config.headers(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: mathimf.h sh: gcc -E -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c Executing: gcc -E -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c sh: # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" # 1 "" # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/confdefs.h" 1 # 2 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conffix.h" 1 # 3 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 Possible ERROR while running preprocessor: /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c:3:21: fatal error: mathimf.h: No such file or directory #include ^ compilation terminated. ret = 256 error message = {/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c:3:21: fatal error: mathimf.h: No such file or directory #include ^ compilation terminated. } Source: #include "confdefs.h" #include "conffix.h" #include ================================================================================ TEST check from config.headers(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/procfs.h sh: gcc -E -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c Executing: gcc -E -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c sh: # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" # 1 "" # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/confdefs.h" 1 # 2 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conffix.h" 1 # 3 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 # 1 "/usr/include/sys/procfs.h" 1 3 4 # 31 "/usr/include/sys/procfs.h" 3 4 # 1 "/usr/include/features.h" 1 3 4 # 347 "/usr/include/features.h" 3 4 # 1 "/usr/include/sys/cdefs.h" 1 3 4 # 353 "/usr/include/sys/cdefs.h" 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 354 "/usr/include/sys/cdefs.h" 2 3 4 # 348 "/usr/include/features.h" 2 3 4 # 371 "/usr/include/features.h" 3 4 # 1 "/usr/include/gnu/stubs.h" 1 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 5 "/usr/include/gnu/stubs.h" 2 3 4 # 1 "/usr/include/gnu/stubs-64.h" 1 3 4 # 10 "/usr/include/gnu/stubs.h" 2 3 4 # 372 "/usr/include/features.h" 2 3 4 # 32 "/usr/include/sys/procfs.h" 2 3 4 # 1 "/usr/include/sys/time.h" 1 3 4 # 25 "/usr/include/sys/time.h" 3 4 # 1 "/usr/include/bits/types.h" 1 3 4 # 28 "/usr/include/bits/types.h" 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 29 "/usr/include/bits/types.h" 2 3 4 typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; # 131 "/usr/include/bits/types.h" 3 4 # 1 "/usr/include/bits/typesizes.h" 1 3 4 # 132 "/usr/include/bits/types.h" 2 3 4 typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned long int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef long int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; # 26 "/usr/include/sys/time.h" 2 3 4 # 1 "/usr/include/time.h" 1 3 4 # 74 "/usr/include/time.h" 3 4 typedef __time_t time_t; # 28 "/usr/include/sys/time.h" 2 3 4 # 1 "/usr/include/bits/time.h" 1 3 4 # 69 "/usr/include/bits/time.h" 3 4 struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; # 30 "/usr/include/sys/time.h" 2 3 4 # 1 "/usr/include/sys/select.h" 1 3 4 # 31 "/usr/include/sys/select.h" 3 4 # 1 "/usr/include/bits/select.h" 1 3 4 # 23 "/usr/include/bits/select.h" 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 24 "/usr/include/bits/select.h" 2 3 4 # 32 "/usr/include/sys/select.h" 2 3 4 # 1 "/usr/include/bits/sigset.h" 1 3 4 # 24 "/usr/include/bits/sigset.h" 3 4 typedef int __sig_atomic_t; typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; # 35 "/usr/include/sys/select.h" 2 3 4 typedef __sigset_t sigset_t; # 1 "/usr/include/time.h" 1 3 4 # 120 "/usr/include/time.h" 3 4 struct timespec { __time_t tv_sec; long int tv_nsec; }; # 45 "/usr/include/sys/select.h" 2 3 4 # 1 "/usr/include/bits/time.h" 1 3 4 # 47 "/usr/include/sys/select.h" 2 3 4 typedef __suseconds_t suseconds_t; typedef long int __fd_mask; # 67 "/usr/include/sys/select.h" 3 4 typedef struct { __fd_mask __fds_bits[1024 / (8 * (int) sizeof (__fd_mask))]; } fd_set; typedef __fd_mask fd_mask; # 99 "/usr/include/sys/select.h" 3 4 # 109 "/usr/include/sys/select.h" 3 4 extern int select (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, struct timeval *__restrict __timeout); # 121 "/usr/include/sys/select.h" 3 4 extern int pselect (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, const struct timespec *__restrict __timeout, const __sigset_t *__restrict __sigmask); # 32 "/usr/include/sys/time.h" 2 3 4 # 57 "/usr/include/sys/time.h" 3 4 struct timezone { int tz_minuteswest; int tz_dsttime; }; typedef struct timezone *__restrict __timezone_ptr_t; # 73 "/usr/include/sys/time.h" 3 4 extern int gettimeofday (struct timeval *__restrict __tv, __timezone_ptr_t __tz) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int settimeofday (__const struct timeval *__tv, __const struct timezone *__tz) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int adjtime (__const struct timeval *__delta, struct timeval *__olddelta) __attribute__ ((__nothrow__)); enum __itimer_which { ITIMER_REAL = 0, ITIMER_VIRTUAL = 1, ITIMER_PROF = 2 }; struct itimerval { struct timeval it_interval; struct timeval it_value; }; typedef int __itimer_which_t; extern int getitimer (__itimer_which_t __which, struct itimerval *__value) __attribute__ ((__nothrow__)); extern int setitimer (__itimer_which_t __which, __const struct itimerval *__restrict __new, struct itimerval *__restrict __old) __attribute__ ((__nothrow__)); extern int utimes (__const char *__file, __const struct timeval __tvp[2]) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int lutimes (__const char *__file, __const struct timeval __tvp[2]) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int futimes (int __fd, __const struct timeval __tvp[2]) __attribute__ ((__nothrow__)); # 191 "/usr/include/sys/time.h" 3 4 # 33 "/usr/include/sys/procfs.h" 2 3 4 # 1 "/usr/include/sys/types.h" 1 3 4 # 29 "/usr/include/sys/types.h" 3 4 typedef __u_char u_char; typedef __u_short u_short; typedef __u_int u_int; typedef __u_long u_long; typedef __quad_t quad_t; typedef __u_quad_t u_quad_t; typedef __fsid_t fsid_t; typedef __loff_t loff_t; typedef __ino_t ino_t; # 62 "/usr/include/sys/types.h" 3 4 typedef __dev_t dev_t; typedef __gid_t gid_t; typedef __mode_t mode_t; typedef __nlink_t nlink_t; typedef __uid_t uid_t; typedef __off_t off_t; # 100 "/usr/include/sys/types.h" 3 4 typedef __pid_t pid_t; typedef __id_t id_t; typedef __ssize_t ssize_t; typedef __daddr_t daddr_t; typedef __caddr_t caddr_t; typedef __key_t key_t; # 133 "/usr/include/sys/types.h" 3 4 # 1 "/usr/include/time.h" 1 3 4 # 92 "/usr/include/time.h" 3 4 typedef __clockid_t clockid_t; # 104 "/usr/include/time.h" 3 4 typedef __timer_t timer_t; # 134 "/usr/include/sys/types.h" 2 3 4 # 147 "/usr/include/sys/types.h" 3 4 # 1 "/opt/gcc/4.8.1/snos/lib/gcc/x86_64-suse-linux/4.8.1/include/stddef.h" 1 3 4 # 212 "/opt/gcc/4.8.1/snos/lib/gcc/x86_64-suse-linux/4.8.1/include/stddef.h" 3 4 typedef long unsigned int size_t; # 148 "/usr/include/sys/types.h" 2 3 4 typedef unsigned long int ulong; typedef unsigned short int ushort; typedef unsigned int uint; # 195 "/usr/include/sys/types.h" 3 4 typedef int int8_t __attribute__ ((__mode__ (__QI__))); typedef int int16_t __attribute__ ((__mode__ (__HI__))); typedef int int32_t __attribute__ ((__mode__ (__SI__))); typedef int int64_t __attribute__ ((__mode__ (__DI__))); typedef unsigned int u_int8_t __attribute__ ((__mode__ (__QI__))); typedef unsigned int u_int16_t __attribute__ ((__mode__ (__HI__))); typedef unsigned int u_int32_t __attribute__ ((__mode__ (__SI__))); typedef unsigned int u_int64_t __attribute__ ((__mode__ (__DI__))); typedef int register_t __attribute__ ((__mode__ (__word__))); # 217 "/usr/include/sys/types.h" 3 4 # 1 "/usr/include/endian.h" 1 3 4 # 37 "/usr/include/endian.h" 3 4 # 1 "/usr/include/bits/endian.h" 1 3 4 # 38 "/usr/include/endian.h" 2 3 4 # 61 "/usr/include/endian.h" 3 4 # 1 "/usr/include/bits/byteswap.h" 1 3 4 # 28 "/usr/include/bits/byteswap.h" 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 29 "/usr/include/bits/byteswap.h" 2 3 4 # 62 "/usr/include/endian.h" 2 3 4 # 218 "/usr/include/sys/types.h" 2 3 4 # 1 "/usr/include/sys/sysmacros.h" 1 3 4 # 30 "/usr/include/sys/sysmacros.h" 3 4 __extension__ extern unsigned int gnu_dev_major (unsigned long long int __dev) __attribute__ ((__nothrow__)); __extension__ extern unsigned int gnu_dev_minor (unsigned long long int __dev) __attribute__ ((__nothrow__)); __extension__ extern unsigned long long int gnu_dev_makedev (unsigned int __major, unsigned int __minor) __attribute__ ((__nothrow__)); # 224 "/usr/include/sys/types.h" 2 3 4 # 235 "/usr/include/sys/types.h" 3 4 typedef __blkcnt_t blkcnt_t; typedef __fsblkcnt_t fsblkcnt_t; typedef __fsfilcnt_t fsfilcnt_t; # 270 "/usr/include/sys/types.h" 3 4 # 1 "/usr/include/bits/pthreadtypes.h" 1 3 4 # 23 "/usr/include/bits/pthreadtypes.h" 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 24 "/usr/include/bits/pthreadtypes.h" 2 3 4 # 50 "/usr/include/bits/pthreadtypes.h" 3 4 typedef unsigned long int pthread_t; typedef union { char __size[56]; long int __align; } pthread_attr_t; typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; # 76 "/usr/include/bits/pthreadtypes.h" 3 4 typedef union { struct __pthread_mutex_s { int __lock; unsigned int __count; int __owner; unsigned int __nusers; int __kind; int __spins; __pthread_list_t __list; # 101 "/usr/include/bits/pthreadtypes.h" 3 4 } __data; char __size[40]; long int __align; } pthread_mutex_t; typedef union { char __size[4]; int __align; } pthread_mutexattr_t; typedef union { struct { int __lock; unsigned int __futex; __extension__ unsigned long long int __total_seq; __extension__ unsigned long long int __wakeup_seq; __extension__ unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; __extension__ long long int __align; } pthread_cond_t; typedef union { char __size[4]; int __align; } pthread_condattr_t; typedef unsigned int pthread_key_t; typedef int pthread_once_t; typedef union { struct { int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; unsigned int __flags; } __data; # 187 "/usr/include/bits/pthreadtypes.h" 3 4 char __size[56]; long int __align; } pthread_rwlock_t; typedef union { char __size[8]; long int __align; } pthread_rwlockattr_t; typedef volatile int pthread_spinlock_t; typedef union { char __size[32]; long int __align; } pthread_barrier_t; typedef union { char __size[4]; int __align; } pthread_barrierattr_t; # 271 "/usr/include/sys/types.h" 2 3 4 # 34 "/usr/include/sys/procfs.h" 2 3 4 # 1 "/usr/include/sys/user.h" 1 3 4 # 26 "/usr/include/sys/user.h" 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 27 "/usr/include/sys/user.h" 2 3 4 struct user_fpregs_struct { __uint16_t cwd; __uint16_t swd; __uint16_t ftw; __uint16_t fop; __uint64_t rip; __uint64_t rdp; __uint32_t mxcsr; __uint32_t mxcr_mask; __uint32_t st_space[32]; __uint32_t xmm_space[64]; __uint32_t padding[24]; }; struct user_regs_struct { unsigned long r15; unsigned long r14; unsigned long r13; unsigned long r12; unsigned long rbp; unsigned long rbx; unsigned long r11; unsigned long r10; unsigned long r9; unsigned long r8; unsigned long rax; unsigned long rcx; unsigned long rdx; unsigned long rsi; unsigned long rdi; unsigned long orig_rax; unsigned long rip; unsigned long cs; unsigned long eflags; unsigned long rsp; unsigned long ss; unsigned long fs_base; unsigned long gs_base; unsigned long ds; unsigned long es; unsigned long fs; unsigned long gs; }; struct user { struct user_regs_struct regs; int u_fpvalid; struct user_fpregs_struct i387; unsigned long int u_tsize; unsigned long int u_dsize; unsigned long int u_ssize; unsigned long start_code; unsigned long start_stack; long int signal; int reserved; struct user_regs_struct* u_ar0; struct user_fpregs_struct* u_fpstate; unsigned long int magic; char u_comm [32]; unsigned long int u_debugreg [8]; }; # 35 "/usr/include/sys/procfs.h" 2 3 4 typedef unsigned long elf_greg_t; typedef elf_greg_t elf_gregset_t[(sizeof (struct user_regs_struct) / sizeof(elf_greg_t))]; # 60 "/usr/include/sys/procfs.h" 3 4 typedef struct user_fpregs_struct elf_fpregset_t; struct elf_siginfo { int si_signo; int si_code; int si_errno; }; # 79 "/usr/include/sys/procfs.h" 3 4 struct elf_prstatus { struct elf_siginfo pr_info; short int pr_cursig; unsigned long int pr_sigpend; unsigned long int pr_sighold; __pid_t pr_pid; __pid_t pr_ppid; __pid_t pr_pgrp; __pid_t pr_sid; struct timeval pr_utime; struct timeval pr_stime; struct timeval pr_cutime; struct timeval pr_cstime; elf_gregset_t pr_reg; int pr_fpvalid; }; struct elf_prpsinfo { char pr_state; char pr_sname; char pr_zomb; char pr_nice; unsigned long int pr_flag; unsigned int pr_uid; unsigned int pr_gid; int pr_pid, pr_ppid, pr_pgrp, pr_sid; char pr_fname[16]; char pr_psargs[(80)]; }; typedef void *psaddr_t; typedef elf_gregset_t prgregset_t; typedef elf_fpregset_t prfpregset_t; typedef __pid_t lwpid_t; typedef struct elf_prstatus prstatus_t; typedef struct elf_prpsinfo prpsinfo_t; # 3 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 Defined "HAVE_SYS_PROCFS_H" to "1" ================================================================================ TEST check from config.headers(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: sys/resource.h sh: gcc -E -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c Executing: gcc -E -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c sh: # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" # 1 "" # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/confdefs.h" 1 # 2 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conffix.h" 1 # 3 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 # 1 "/usr/include/sys/resource.h" 1 3 4 # 22 "/usr/include/sys/resource.h" 3 4 # 1 "/usr/include/features.h" 1 3 4 # 347 "/usr/include/features.h" 3 4 # 1 "/usr/include/sys/cdefs.h" 1 3 4 # 353 "/usr/include/sys/cdefs.h" 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 354 "/usr/include/sys/cdefs.h" 2 3 4 # 348 "/usr/include/features.h" 2 3 4 # 371 "/usr/include/features.h" 3 4 # 1 "/usr/include/gnu/stubs.h" 1 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 5 "/usr/include/gnu/stubs.h" 2 3 4 # 1 "/usr/include/gnu/stubs-64.h" 1 3 4 # 10 "/usr/include/gnu/stubs.h" 2 3 4 # 372 "/usr/include/features.h" 2 3 4 # 23 "/usr/include/sys/resource.h" 2 3 4 # 1 "/usr/include/bits/resource.h" 1 3 4 # 25 "/usr/include/bits/resource.h" 3 4 # 1 "/usr/include/bits/types.h" 1 3 4 # 28 "/usr/include/bits/types.h" 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 29 "/usr/include/bits/types.h" 2 3 4 typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; # 131 "/usr/include/bits/types.h" 3 4 # 1 "/usr/include/bits/typesizes.h" 1 3 4 # 132 "/usr/include/bits/types.h" 2 3 4 typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned long int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef long int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; # 26 "/usr/include/bits/resource.h" 2 3 4 enum __rlimit_resource { RLIMIT_CPU = 0, RLIMIT_FSIZE = 1, RLIMIT_DATA = 2, RLIMIT_STACK = 3, RLIMIT_CORE = 4, __RLIMIT_RSS = 5, RLIMIT_NOFILE = 7, __RLIMIT_OFILE = RLIMIT_NOFILE, RLIMIT_AS = 9, __RLIMIT_NPROC = 6, __RLIMIT_MEMLOCK = 8, __RLIMIT_LOCKS = 10, __RLIMIT_SIGPENDING = 11, __RLIMIT_MSGQUEUE = 12, __RLIMIT_NICE = 13, __RLIMIT_RTPRIO = 14, __RLIMIT_NLIMITS = 15, __RLIM_NLIMITS = __RLIMIT_NLIMITS }; # 127 "/usr/include/bits/resource.h" 3 4 typedef __rlim_t rlim_t; struct rlimit { rlim_t rlim_cur; rlim_t rlim_max; }; # 154 "/usr/include/bits/resource.h" 3 4 enum __rusage_who { RUSAGE_SELF = 0, RUSAGE_CHILDREN = -1 # 172 "/usr/include/bits/resource.h" 3 4 }; # 1 "/usr/include/bits/time.h" 1 3 4 # 69 "/usr/include/bits/time.h" 3 4 struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; # 176 "/usr/include/bits/resource.h" 2 3 4 struct rusage { struct timeval ru_utime; struct timeval ru_stime; long int ru_maxrss; long int ru_ixrss; long int ru_idrss; long int ru_isrss; long int ru_minflt; long int ru_majflt; long int ru_nswap; long int ru_inblock; long int ru_oublock; long int ru_msgsnd; long int ru_msgrcv; long int ru_nsignals; long int ru_nvcsw; long int ru_nivcsw; }; enum __priority_which { PRIO_PROCESS = 0, PRIO_PGRP = 1, PRIO_USER = 2 }; # 26 "/usr/include/sys/resource.h" 2 3 4 typedef __id_t id_t; # 43 "/usr/include/sys/resource.h" 3 4 typedef int __rlimit_resource_t; typedef int __rusage_who_t; typedef int __priority_which_t; extern int getrlimit (__rlimit_resource_t __resource, struct rlimit *__rlimits) __attribute__ ((__nothrow__)); # 70 "/usr/include/sys/resource.h" 3 4 extern int setrlimit (__rlimit_resource_t __resource, __const struct rlimit *__rlimits) __attribute__ ((__nothrow__)); # 88 "/usr/include/sys/resource.h" 3 4 extern int getrusage (__rusage_who_t __who, struct rusage *__usage) __attribute__ ((__nothrow__)); extern int getpriority (__priority_which_t __which, id_t __who) __attribute__ ((__nothrow__)); extern int setpriority (__priority_which_t __which, id_t __who, int __prio) __attribute__ ((__nothrow__)); # 3 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 Defined "HAVE_SYS_RESOURCE_H" to "1" ================================================================================ TEST check from config.headers(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: unistd.h sh: gcc -E -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c Executing: gcc -E -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c sh: # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" # 1 "" # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/confdefs.h" 1 # 2 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conffix.h" 1 # 3 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 # 1 "/usr/include/unistd.h" 1 3 4 # 26 "/usr/include/unistd.h" 3 4 # 1 "/usr/include/features.h" 1 3 4 # 347 "/usr/include/features.h" 3 4 # 1 "/usr/include/sys/cdefs.h" 1 3 4 # 353 "/usr/include/sys/cdefs.h" 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 354 "/usr/include/sys/cdefs.h" 2 3 4 # 348 "/usr/include/features.h" 2 3 4 # 371 "/usr/include/features.h" 3 4 # 1 "/usr/include/gnu/stubs.h" 1 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 5 "/usr/include/gnu/stubs.h" 2 3 4 # 1 "/usr/include/gnu/stubs-64.h" 1 3 4 # 10 "/usr/include/gnu/stubs.h" 2 3 4 # 372 "/usr/include/features.h" 2 3 4 # 27 "/usr/include/unistd.h" 2 3 4 # 203 "/usr/include/unistd.h" 3 4 # 1 "/usr/include/bits/posix_opt.h" 1 3 4 # 204 "/usr/include/unistd.h" 2 3 4 # 218 "/usr/include/unistd.h" 3 4 # 1 "/usr/include/bits/types.h" 1 3 4 # 28 "/usr/include/bits/types.h" 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 29 "/usr/include/bits/types.h" 2 3 4 typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; # 131 "/usr/include/bits/types.h" 3 4 # 1 "/usr/include/bits/typesizes.h" 1 3 4 # 132 "/usr/include/bits/types.h" 2 3 4 typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned long int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef long int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; # 219 "/usr/include/unistd.h" 2 3 4 typedef __ssize_t ssize_t; # 1 "/opt/gcc/4.8.1/snos/lib/gcc/x86_64-suse-linux/4.8.1/include/stddef.h" 1 3 4 # 212 "/opt/gcc/4.8.1/snos/lib/gcc/x86_64-suse-linux/4.8.1/include/stddef.h" 3 4 typedef long unsigned int size_t; # 228 "/usr/include/unistd.h" 2 3 4 typedef __gid_t gid_t; typedef __uid_t uid_t; typedef __off_t off_t; # 256 "/usr/include/unistd.h" 3 4 typedef __useconds_t useconds_t; typedef __pid_t pid_t; typedef __intptr_t intptr_t; typedef __socklen_t socklen_t; # 288 "/usr/include/unistd.h" 3 4 extern int access (__const char *__name, int __type) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); # 305 "/usr/include/unistd.h" 3 4 extern int faccessat (int __fd, __const char *__file, int __type, int __flag) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (2))) ; # 331 "/usr/include/unistd.h" 3 4 extern __off_t lseek (int __fd, __off_t __offset, int __whence) __attribute__ ((__nothrow__)); # 350 "/usr/include/unistd.h" 3 4 extern int close (int __fd); extern ssize_t read (int __fd, void *__buf, size_t __nbytes) ; extern ssize_t write (int __fd, __const void *__buf, size_t __n) ; # 414 "/usr/include/unistd.h" 3 4 extern int pipe (int __pipedes[2]) __attribute__ ((__nothrow__)) ; # 429 "/usr/include/unistd.h" 3 4 extern unsigned int alarm (unsigned int __seconds) __attribute__ ((__nothrow__)); # 441 "/usr/include/unistd.h" 3 4 extern unsigned int sleep (unsigned int __seconds); extern __useconds_t ualarm (__useconds_t __value, __useconds_t __interval) __attribute__ ((__nothrow__)); extern int usleep (__useconds_t __useconds); # 465 "/usr/include/unistd.h" 3 4 extern int pause (void); extern int chown (__const char *__file, __uid_t __owner, __gid_t __group) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) ; extern int fchown (int __fd, __uid_t __owner, __gid_t __group) __attribute__ ((__nothrow__)) ; extern int lchown (__const char *__file, __uid_t __owner, __gid_t __group) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) ; extern int fchownat (int __fd, __const char *__file, __uid_t __owner, __gid_t __group, int __flag) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (2))) ; extern int chdir (__const char *__path) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) ; extern int fchdir (int __fd) __attribute__ ((__nothrow__)) ; # 507 "/usr/include/unistd.h" 3 4 extern char *getcwd (char *__buf, size_t __size) __attribute__ ((__nothrow__)) ; # 520 "/usr/include/unistd.h" 3 4 extern char *getwd (char *__buf) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) __attribute__ ((__deprecated__)) ; extern int dup (int __fd) __attribute__ ((__nothrow__)) ; extern int dup2 (int __fd, int __fd2) __attribute__ ((__nothrow__)); # 538 "/usr/include/unistd.h" 3 4 extern char **__environ; extern int execve (__const char *__path, char *__const __argv[], char *__const __envp[]) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int fexecve (int __fd, char *__const __argv[], char *__const __envp[]) __attribute__ ((__nothrow__)); extern int execv (__const char *__path, char *__const __argv[]) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int execle (__const char *__path, __const char *__arg, ...) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int execl (__const char *__path, __const char *__arg, ...) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int execvp (__const char *__file, char *__const __argv[]) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int execlp (__const char *__file, __const char *__arg, ...) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); # 593 "/usr/include/unistd.h" 3 4 extern int nice (int __inc) __attribute__ ((__nothrow__)) ; extern void _exit (int __status) __attribute__ ((__noreturn__)); # 1 "/usr/include/bits/confname.h" 1 3 4 # 26 "/usr/include/bits/confname.h" 3 4 enum { _PC_LINK_MAX, _PC_MAX_CANON, _PC_MAX_INPUT, _PC_NAME_MAX, _PC_PATH_MAX, _PC_PIPE_BUF, _PC_CHOWN_RESTRICTED, _PC_NO_TRUNC, _PC_VDISABLE, _PC_SYNC_IO, _PC_ASYNC_IO, _PC_PRIO_IO, _PC_SOCK_MAXBUF, _PC_FILESIZEBITS, _PC_REC_INCR_XFER_SIZE, _PC_REC_MAX_XFER_SIZE, _PC_REC_MIN_XFER_SIZE, _PC_REC_XFER_ALIGN, _PC_ALLOC_SIZE_MIN, _PC_SYMLINK_MAX, _PC_2_SYMLINKS }; enum { _SC_ARG_MAX, _SC_CHILD_MAX, _SC_CLK_TCK, _SC_NGROUPS_MAX, _SC_OPEN_MAX, _SC_STREAM_MAX, _SC_TZNAME_MAX, _SC_JOB_CONTROL, _SC_SAVED_IDS, _SC_REALTIME_SIGNALS, _SC_PRIORITY_SCHEDULING, _SC_TIMERS, _SC_ASYNCHRONOUS_IO, _SC_PRIORITIZED_IO, _SC_SYNCHRONIZED_IO, _SC_FSYNC, _SC_MAPPED_FILES, _SC_MEMLOCK, _SC_MEMLOCK_RANGE, _SC_MEMORY_PROTECTION, _SC_MESSAGE_PASSING, _SC_SEMAPHORES, _SC_SHARED_MEMORY_OBJECTS, _SC_AIO_LISTIO_MAX, _SC_AIO_MAX, _SC_AIO_PRIO_DELTA_MAX, _SC_DELAYTIMER_MAX, _SC_MQ_OPEN_MAX, _SC_MQ_PRIO_MAX, _SC_VERSION, _SC_PAGESIZE, _SC_RTSIG_MAX, _SC_SEM_NSEMS_MAX, _SC_SEM_VALUE_MAX, _SC_SIGQUEUE_MAX, _SC_TIMER_MAX, _SC_BC_BASE_MAX, _SC_BC_DIM_MAX, _SC_BC_SCALE_MAX, _SC_BC_STRING_MAX, _SC_COLL_WEIGHTS_MAX, _SC_EQUIV_CLASS_MAX, _SC_EXPR_NEST_MAX, _SC_LINE_MAX, _SC_RE_DUP_MAX, _SC_CHARCLASS_NAME_MAX, _SC_2_VERSION, _SC_2_C_BIND, _SC_2_C_DEV, _SC_2_FORT_DEV, _SC_2_FORT_RUN, _SC_2_SW_DEV, _SC_2_LOCALEDEF, _SC_PII, _SC_PII_XTI, _SC_PII_SOCKET, _SC_PII_INTERNET, _SC_PII_OSI, _SC_POLL, _SC_SELECT, _SC_UIO_MAXIOV, _SC_IOV_MAX = _SC_UIO_MAXIOV, _SC_PII_INTERNET_STREAM, _SC_PII_INTERNET_DGRAM, _SC_PII_OSI_COTS, _SC_PII_OSI_CLTS, _SC_PII_OSI_M, _SC_T_IOV_MAX, _SC_THREADS, _SC_THREAD_SAFE_FUNCTIONS, _SC_GETGR_R_SIZE_MAX, _SC_GETPW_R_SIZE_MAX, _SC_LOGIN_NAME_MAX, _SC_TTY_NAME_MAX, _SC_THREAD_DESTRUCTOR_ITERATIONS, _SC_THREAD_KEYS_MAX, _SC_THREAD_STACK_MIN, _SC_THREAD_THREADS_MAX, _SC_THREAD_ATTR_STACKADDR, _SC_THREAD_ATTR_STACKSIZE, _SC_THREAD_PRIORITY_SCHEDULING, _SC_THREAD_PRIO_INHERIT, _SC_THREAD_PRIO_PROTECT, _SC_THREAD_PROCESS_SHARED, _SC_NPROCESSORS_CONF, _SC_NPROCESSORS_ONLN, _SC_PHYS_PAGES, _SC_AVPHYS_PAGES, _SC_ATEXIT_MAX, _SC_PASS_MAX, _SC_XOPEN_VERSION, _SC_XOPEN_XCU_VERSION, _SC_XOPEN_UNIX, _SC_XOPEN_CRYPT, _SC_XOPEN_ENH_I18N, _SC_XOPEN_SHM, _SC_2_CHAR_TERM, _SC_2_C_VERSION, _SC_2_UPE, _SC_XOPEN_XPG2, _SC_XOPEN_XPG3, _SC_XOPEN_XPG4, _SC_CHAR_BIT, _SC_CHAR_MAX, _SC_CHAR_MIN, _SC_INT_MAX, _SC_INT_MIN, _SC_LONG_BIT, _SC_WORD_BIT, _SC_MB_LEN_MAX, _SC_NZERO, _SC_SSIZE_MAX, _SC_SCHAR_MAX, _SC_SCHAR_MIN, _SC_SHRT_MAX, _SC_SHRT_MIN, _SC_UCHAR_MAX, _SC_UINT_MAX, _SC_ULONG_MAX, _SC_USHRT_MAX, _SC_NL_ARGMAX, _SC_NL_LANGMAX, _SC_NL_MSGMAX, _SC_NL_NMAX, _SC_NL_SETMAX, _SC_NL_TEXTMAX, _SC_XBS5_ILP32_OFF32, _SC_XBS5_ILP32_OFFBIG, _SC_XBS5_LP64_OFF64, _SC_XBS5_LPBIG_OFFBIG, _SC_XOPEN_LEGACY, _SC_XOPEN_REALTIME, _SC_XOPEN_REALTIME_THREADS, _SC_ADVISORY_INFO, _SC_BARRIERS, _SC_BASE, _SC_C_LANG_SUPPORT, _SC_C_LANG_SUPPORT_R, _SC_CLOCK_SELECTION, _SC_CPUTIME, _SC_THREAD_CPUTIME, _SC_DEVICE_IO, _SC_DEVICE_SPECIFIC, _SC_DEVICE_SPECIFIC_R, _SC_FD_MGMT, _SC_FIFO, _SC_PIPE, _SC_FILE_ATTRIBUTES, _SC_FILE_LOCKING, _SC_FILE_SYSTEM, _SC_MONOTONIC_CLOCK, _SC_MULTI_PROCESS, _SC_SINGLE_PROCESS, _SC_NETWORKING, _SC_READER_WRITER_LOCKS, _SC_SPIN_LOCKS, _SC_REGEXP, _SC_REGEX_VERSION, _SC_SHELL, _SC_SIGNALS, _SC_SPAWN, _SC_SPORADIC_SERVER, _SC_THREAD_SPORADIC_SERVER, _SC_SYSTEM_DATABASE, _SC_SYSTEM_DATABASE_R, _SC_TIMEOUTS, _SC_TYPED_MEMORY_OBJECTS, _SC_USER_GROUPS, _SC_USER_GROUPS_R, _SC_2_PBS, _SC_2_PBS_ACCOUNTING, _SC_2_PBS_LOCATE, _SC_2_PBS_MESSAGE, _SC_2_PBS_TRACK, _SC_SYMLOOP_MAX, _SC_STREAMS, _SC_2_PBS_CHECKPOINT, _SC_V6_ILP32_OFF32, _SC_V6_ILP32_OFFBIG, _SC_V6_LP64_OFF64, _SC_V6_LPBIG_OFFBIG, _SC_HOST_NAME_MAX, _SC_TRACE, _SC_TRACE_EVENT_FILTER, _SC_TRACE_INHERIT, _SC_TRACE_LOG, _SC_LEVEL1_ICACHE_SIZE, _SC_LEVEL1_ICACHE_ASSOC, _SC_LEVEL1_ICACHE_LINESIZE, _SC_LEVEL1_DCACHE_SIZE, _SC_LEVEL1_DCACHE_ASSOC, _SC_LEVEL1_DCACHE_LINESIZE, _SC_LEVEL2_CACHE_SIZE, _SC_LEVEL2_CACHE_ASSOC, _SC_LEVEL2_CACHE_LINESIZE, _SC_LEVEL3_CACHE_SIZE, _SC_LEVEL3_CACHE_ASSOC, _SC_LEVEL3_CACHE_LINESIZE, _SC_LEVEL4_CACHE_SIZE, _SC_LEVEL4_CACHE_ASSOC, _SC_LEVEL4_CACHE_LINESIZE, _SC_IPV6 = _SC_LEVEL1_ICACHE_SIZE + 50, _SC_RAW_SOCKETS, _SC_V7_ILP32_OFF32, _SC_V7_ILP32_OFFBIG, _SC_V7_LP64_OFF64, _SC_V7_LPBIG_OFFBIG, _SC_SS_REPL_MAX, _SC_TRACE_EVENT_NAME_MAX, _SC_TRACE_NAME_MAX, _SC_TRACE_SYS_MAX, _SC_TRACE_USER_EVENT_MAX, _SC_XOPEN_STREAMS, _SC_THREAD_ROBUST_PRIO_INHERIT, _SC_THREAD_ROBUST_PRIO_PROTECT }; enum { _CS_PATH, _CS_V6_WIDTH_RESTRICTED_ENVS, _CS_GNU_LIBC_VERSION, _CS_GNU_LIBPTHREAD_VERSION, _CS_V5_WIDTH_RESTRICTED_ENVS, _CS_V7_WIDTH_RESTRICTED_ENVS, _CS_LFS_CFLAGS = 1000, _CS_LFS_LDFLAGS, _CS_LFS_LIBS, _CS_LFS_LINTFLAGS, _CS_LFS64_CFLAGS, _CS_LFS64_LDFLAGS, _CS_LFS64_LIBS, _CS_LFS64_LINTFLAGS, _CS_XBS5_ILP32_OFF32_CFLAGS = 1100, _CS_XBS5_ILP32_OFF32_LDFLAGS, _CS_XBS5_ILP32_OFF32_LIBS, _CS_XBS5_ILP32_OFF32_LINTFLAGS, _CS_XBS5_ILP32_OFFBIG_CFLAGS, _CS_XBS5_ILP32_OFFBIG_LDFLAGS, _CS_XBS5_ILP32_OFFBIG_LIBS, _CS_XBS5_ILP32_OFFBIG_LINTFLAGS, _CS_XBS5_LP64_OFF64_CFLAGS, _CS_XBS5_LP64_OFF64_LDFLAGS, _CS_XBS5_LP64_OFF64_LIBS, _CS_XBS5_LP64_OFF64_LINTFLAGS, _CS_XBS5_LPBIG_OFFBIG_CFLAGS, _CS_XBS5_LPBIG_OFFBIG_LDFLAGS, _CS_XBS5_LPBIG_OFFBIG_LIBS, _CS_XBS5_LPBIG_OFFBIG_LINTFLAGS, _CS_POSIX_V6_ILP32_OFF32_CFLAGS, _CS_POSIX_V6_ILP32_OFF32_LDFLAGS, _CS_POSIX_V6_ILP32_OFF32_LIBS, _CS_POSIX_V6_ILP32_OFF32_LINTFLAGS, _CS_POSIX_V6_ILP32_OFFBIG_CFLAGS, _CS_POSIX_V6_ILP32_OFFBIG_LDFLAGS, _CS_POSIX_V6_ILP32_OFFBIG_LIBS, _CS_POSIX_V6_ILP32_OFFBIG_LINTFLAGS, _CS_POSIX_V6_LP64_OFF64_CFLAGS, _CS_POSIX_V6_LP64_OFF64_LDFLAGS, _CS_POSIX_V6_LP64_OFF64_LIBS, _CS_POSIX_V6_LP64_OFF64_LINTFLAGS, _CS_POSIX_V6_LPBIG_OFFBIG_CFLAGS, _CS_POSIX_V6_LPBIG_OFFBIG_LDFLAGS, _CS_POSIX_V6_LPBIG_OFFBIG_LIBS, _CS_POSIX_V6_LPBIG_OFFBIG_LINTFLAGS, _CS_POSIX_V7_ILP32_OFF32_CFLAGS, _CS_POSIX_V7_ILP32_OFF32_LDFLAGS, _CS_POSIX_V7_ILP32_OFF32_LIBS, _CS_POSIX_V7_ILP32_OFF32_LINTFLAGS, _CS_POSIX_V7_ILP32_OFFBIG_CFLAGS, _CS_POSIX_V7_ILP32_OFFBIG_LDFLAGS, _CS_POSIX_V7_ILP32_OFFBIG_LIBS, _CS_POSIX_V7_ILP32_OFFBIG_LINTFLAGS, _CS_POSIX_V7_LP64_OFF64_CFLAGS, _CS_POSIX_V7_LP64_OFF64_LDFLAGS, _CS_POSIX_V7_LP64_OFF64_LIBS, _CS_POSIX_V7_LP64_OFF64_LINTFLAGS, _CS_POSIX_V7_LPBIG_OFFBIG_CFLAGS, _CS_POSIX_V7_LPBIG_OFFBIG_LDFLAGS, _CS_POSIX_V7_LPBIG_OFFBIG_LIBS, _CS_POSIX_V7_LPBIG_OFFBIG_LINTFLAGS }; # 605 "/usr/include/unistd.h" 2 3 4 extern long int pathconf (__const char *__path, int __name) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern long int fpathconf (int __fd, int __name) __attribute__ ((__nothrow__)); extern long int sysconf (int __name) __attribute__ ((__nothrow__)); extern size_t confstr (int __name, char *__buf, size_t __len) __attribute__ ((__nothrow__)); extern __pid_t getpid (void) __attribute__ ((__nothrow__)); extern __pid_t getppid (void) __attribute__ ((__nothrow__)); extern __pid_t getpgrp (void) __attribute__ ((__nothrow__)); # 641 "/usr/include/unistd.h" 3 4 extern __pid_t __getpgid (__pid_t __pid) __attribute__ ((__nothrow__)); # 650 "/usr/include/unistd.h" 3 4 extern int setpgid (__pid_t __pid, __pid_t __pgid) __attribute__ ((__nothrow__)); # 667 "/usr/include/unistd.h" 3 4 extern int setpgrp (void) __attribute__ ((__nothrow__)); # 684 "/usr/include/unistd.h" 3 4 extern __pid_t setsid (void) __attribute__ ((__nothrow__)); extern __uid_t getuid (void) __attribute__ ((__nothrow__)); extern __uid_t geteuid (void) __attribute__ ((__nothrow__)); extern __gid_t getgid (void) __attribute__ ((__nothrow__)); extern __gid_t getegid (void) __attribute__ ((__nothrow__)); extern int getgroups (int __size, __gid_t __list[]) __attribute__ ((__nothrow__)) ; # 717 "/usr/include/unistd.h" 3 4 extern int setuid (__uid_t __uid) __attribute__ ((__nothrow__)); extern int setreuid (__uid_t __ruid, __uid_t __euid) __attribute__ ((__nothrow__)); extern int seteuid (__uid_t __uid) __attribute__ ((__nothrow__)); extern int setgid (__gid_t __gid) __attribute__ ((__nothrow__)); extern int setregid (__gid_t __rgid, __gid_t __egid) __attribute__ ((__nothrow__)); extern int setegid (__gid_t __gid) __attribute__ ((__nothrow__)); # 773 "/usr/include/unistd.h" 3 4 extern __pid_t fork (void) __attribute__ ((__nothrow__)); extern __pid_t vfork (void) __attribute__ ((__nothrow__)); extern char *ttyname (int __fd) __attribute__ ((__nothrow__)); extern int ttyname_r (int __fd, char *__buf, size_t __buflen) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (2))) ; extern int isatty (int __fd) __attribute__ ((__nothrow__)); extern int ttyslot (void) __attribute__ ((__nothrow__)); extern int link (__const char *__from, __const char *__to) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))) ; extern int linkat (int __fromfd, __const char *__from, int __tofd, __const char *__to, int __flags) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (2, 4))) ; extern int symlink (__const char *__from, __const char *__to) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))) ; extern ssize_t readlink (__const char *__restrict __path, char *__restrict __buf, size_t __len) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 2))) ; extern int symlinkat (__const char *__from, int __tofd, __const char *__to) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1, 3))) ; extern ssize_t readlinkat (int __fd, __const char *__restrict __path, char *__restrict __buf, size_t __len) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (2, 3))) ; extern int unlink (__const char *__name) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int unlinkat (int __fd, __const char *__name, int __flag) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (2))); extern int rmdir (__const char *__path) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern __pid_t tcgetpgrp (int __fd) __attribute__ ((__nothrow__)); extern int tcsetpgrp (int __fd, __pid_t __pgrp_id) __attribute__ ((__nothrow__)); extern char *getlogin (void); extern int getlogin_r (char *__name, size_t __name_len) __attribute__ ((__nonnull__ (1))); extern int setlogin (__const char *__name) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); # 887 "/usr/include/unistd.h" 3 4 # 1 "/usr/include/getopt.h" 1 3 4 # 59 "/usr/include/getopt.h" 3 4 extern char *optarg; # 73 "/usr/include/getopt.h" 3 4 extern int optind; extern int opterr; extern int optopt; # 152 "/usr/include/getopt.h" 3 4 extern int getopt (int ___argc, char *const *___argv, const char *__shortopts) __attribute__ ((__nothrow__)); # 888 "/usr/include/unistd.h" 2 3 4 extern int gethostname (char *__name, size_t __len) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int sethostname (__const char *__name, size_t __len) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) ; extern int sethostid (long int __id) __attribute__ ((__nothrow__)) ; extern int getdomainname (char *__name, size_t __len) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) ; extern int setdomainname (__const char *__name, size_t __len) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) ; extern int vhangup (void) __attribute__ ((__nothrow__)); extern int revoke (__const char *__file) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) ; extern int profil (unsigned short int *__sample_buffer, size_t __size, size_t __offset, unsigned int __scale) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))); extern int acct (__const char *__name) __attribute__ ((__nothrow__)); extern char *getusershell (void) __attribute__ ((__nothrow__)); extern void endusershell (void) __attribute__ ((__nothrow__)); extern void setusershell (void) __attribute__ ((__nothrow__)); extern int daemon (int __nochdir, int __noclose) __attribute__ ((__nothrow__)) ; extern int chroot (__const char *__path) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) ; extern char *getpass (__const char *__prompt) __attribute__ ((__nonnull__ (1))); # 973 "/usr/include/unistd.h" 3 4 extern int fsync (int __fd); extern long int gethostid (void); extern void sync (void) __attribute__ ((__nothrow__)); extern int getpagesize (void) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern int getdtablesize (void) __attribute__ ((__nothrow__)); extern int truncate (__const char *__file, __off_t __length) __attribute__ ((__nothrow__)) __attribute__ ((__nonnull__ (1))) ; # 1020 "/usr/include/unistd.h" 3 4 extern int ftruncate (int __fd, __off_t __length) __attribute__ ((__nothrow__)) ; # 1040 "/usr/include/unistd.h" 3 4 extern int brk (void *__addr) __attribute__ ((__nothrow__)) ; extern void *sbrk (intptr_t __delta) __attribute__ ((__nothrow__)); # 1061 "/usr/include/unistd.h" 3 4 extern long int syscall (long int __sysno, ...) __attribute__ ((__nothrow__)); # 1084 "/usr/include/unistd.h" 3 4 extern int lockf (int __fd, int __cmd, __off_t __len) ; # 1115 "/usr/include/unistd.h" 3 4 extern int fdatasync (int __fildes); # 1153 "/usr/include/unistd.h" 3 4 # 3 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 Defined "HAVE_UNISTD_H" to "1" ================================================================================ TEST check from config.headers(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/headers.py:77) TESTING: check from config.headers(config/BuildSystem/config/headers.py:77) Checks for "header", and defines HAVE_"header" if found Checking for header: netinet/in.h sh: gcc -E -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c Executing: gcc -E -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c sh: # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" # 1 "" # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/confdefs.h" 1 # 2 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conffix.h" 1 # 3 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 # 1 "/usr/include/netinet/in.h" 1 3 4 # 23 "/usr/include/netinet/in.h" 3 4 # 1 "/usr/include/features.h" 1 3 4 # 347 "/usr/include/features.h" 3 4 # 1 "/usr/include/sys/cdefs.h" 1 3 4 # 353 "/usr/include/sys/cdefs.h" 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 354 "/usr/include/sys/cdefs.h" 2 3 4 # 348 "/usr/include/features.h" 2 3 4 # 371 "/usr/include/features.h" 3 4 # 1 "/usr/include/gnu/stubs.h" 1 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 5 "/usr/include/gnu/stubs.h" 2 3 4 # 1 "/usr/include/gnu/stubs-64.h" 1 3 4 # 10 "/usr/include/gnu/stubs.h" 2 3 4 # 372 "/usr/include/features.h" 2 3 4 # 24 "/usr/include/netinet/in.h" 2 3 4 # 1 "/opt/gcc/4.8.1/snos/lib/gcc/x86_64-suse-linux/4.8.1/include/stdint.h" 1 3 4 # 9 "/opt/gcc/4.8.1/snos/lib/gcc/x86_64-suse-linux/4.8.1/include/stdint.h" 3 4 # 1 "/usr/include/stdint.h" 1 3 4 # 27 "/usr/include/stdint.h" 3 4 # 1 "/usr/include/bits/wchar.h" 1 3 4 # 28 "/usr/include/stdint.h" 2 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 29 "/usr/include/stdint.h" 2 3 4 # 37 "/usr/include/stdint.h" 3 4 typedef signed char int8_t; typedef short int int16_t; typedef int int32_t; typedef long int int64_t; typedef unsigned char uint8_t; typedef unsigned short int uint16_t; typedef unsigned int uint32_t; typedef unsigned long int uint64_t; # 66 "/usr/include/stdint.h" 3 4 typedef signed char int_least8_t; typedef short int int_least16_t; typedef int int_least32_t; typedef long int int_least64_t; typedef unsigned char uint_least8_t; typedef unsigned short int uint_least16_t; typedef unsigned int uint_least32_t; typedef unsigned long int uint_least64_t; # 91 "/usr/include/stdint.h" 3 4 typedef signed char int_fast8_t; typedef long int int_fast16_t; typedef long int int_fast32_t; typedef long int int_fast64_t; # 104 "/usr/include/stdint.h" 3 4 typedef unsigned char uint_fast8_t; typedef unsigned long int uint_fast16_t; typedef unsigned long int uint_fast32_t; typedef unsigned long int uint_fast64_t; # 120 "/usr/include/stdint.h" 3 4 typedef long int intptr_t; typedef unsigned long int uintptr_t; # 135 "/usr/include/stdint.h" 3 4 typedef long int intmax_t; typedef unsigned long int uintmax_t; # 10 "/opt/gcc/4.8.1/snos/lib/gcc/x86_64-suse-linux/4.8.1/include/stdint.h" 2 3 4 # 25 "/usr/include/netinet/in.h" 2 3 4 # 1 "/usr/include/sys/socket.h" 1 3 4 # 26 "/usr/include/sys/socket.h" 3 4 # 1 "/usr/include/sys/uio.h" 1 3 4 # 24 "/usr/include/sys/uio.h" 3 4 # 1 "/usr/include/sys/types.h" 1 3 4 # 29 "/usr/include/sys/types.h" 3 4 # 1 "/usr/include/bits/types.h" 1 3 4 # 28 "/usr/include/bits/types.h" 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 29 "/usr/include/bits/types.h" 2 3 4 typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; # 131 "/usr/include/bits/types.h" 3 4 # 1 "/usr/include/bits/typesizes.h" 1 3 4 # 132 "/usr/include/bits/types.h" 2 3 4 typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned long int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef long int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; # 32 "/usr/include/sys/types.h" 2 3 4 typedef __u_char u_char; typedef __u_short u_short; typedef __u_int u_int; typedef __u_long u_long; typedef __quad_t quad_t; typedef __u_quad_t u_quad_t; typedef __fsid_t fsid_t; typedef __loff_t loff_t; typedef __ino_t ino_t; # 62 "/usr/include/sys/types.h" 3 4 typedef __dev_t dev_t; typedef __gid_t gid_t; typedef __mode_t mode_t; typedef __nlink_t nlink_t; typedef __uid_t uid_t; typedef __off_t off_t; # 100 "/usr/include/sys/types.h" 3 4 typedef __pid_t pid_t; typedef __id_t id_t; typedef __ssize_t ssize_t; typedef __daddr_t daddr_t; typedef __caddr_t caddr_t; typedef __key_t key_t; # 133 "/usr/include/sys/types.h" 3 4 # 1 "/usr/include/time.h" 1 3 4 # 74 "/usr/include/time.h" 3 4 typedef __time_t time_t; # 92 "/usr/include/time.h" 3 4 typedef __clockid_t clockid_t; # 104 "/usr/include/time.h" 3 4 typedef __timer_t timer_t; # 134 "/usr/include/sys/types.h" 2 3 4 # 147 "/usr/include/sys/types.h" 3 4 # 1 "/opt/gcc/4.8.1/snos/lib/gcc/x86_64-suse-linux/4.8.1/include/stddef.h" 1 3 4 # 212 "/opt/gcc/4.8.1/snos/lib/gcc/x86_64-suse-linux/4.8.1/include/stddef.h" 3 4 typedef long unsigned int size_t; # 148 "/usr/include/sys/types.h" 2 3 4 typedef unsigned long int ulong; typedef unsigned short int ushort; typedef unsigned int uint; # 201 "/usr/include/sys/types.h" 3 4 typedef unsigned int u_int8_t __attribute__ ((__mode__ (__QI__))); typedef unsigned int u_int16_t __attribute__ ((__mode__ (__HI__))); typedef unsigned int u_int32_t __attribute__ ((__mode__ (__SI__))); typedef unsigned int u_int64_t __attribute__ ((__mode__ (__DI__))); typedef int register_t __attribute__ ((__mode__ (__word__))); # 217 "/usr/include/sys/types.h" 3 4 # 1 "/usr/include/endian.h" 1 3 4 # 37 "/usr/include/endian.h" 3 4 # 1 "/usr/include/bits/endian.h" 1 3 4 # 38 "/usr/include/endian.h" 2 3 4 # 61 "/usr/include/endian.h" 3 4 # 1 "/usr/include/bits/byteswap.h" 1 3 4 # 28 "/usr/include/bits/byteswap.h" 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 29 "/usr/include/bits/byteswap.h" 2 3 4 # 62 "/usr/include/endian.h" 2 3 4 # 218 "/usr/include/sys/types.h" 2 3 4 # 1 "/usr/include/sys/select.h" 1 3 4 # 31 "/usr/include/sys/select.h" 3 4 # 1 "/usr/include/bits/select.h" 1 3 4 # 23 "/usr/include/bits/select.h" 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 24 "/usr/include/bits/select.h" 2 3 4 # 32 "/usr/include/sys/select.h" 2 3 4 # 1 "/usr/include/bits/sigset.h" 1 3 4 # 24 "/usr/include/bits/sigset.h" 3 4 typedef int __sig_atomic_t; typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; # 35 "/usr/include/sys/select.h" 2 3 4 typedef __sigset_t sigset_t; # 1 "/usr/include/time.h" 1 3 4 # 120 "/usr/include/time.h" 3 4 struct timespec { __time_t tv_sec; long int tv_nsec; }; # 45 "/usr/include/sys/select.h" 2 3 4 # 1 "/usr/include/bits/time.h" 1 3 4 # 69 "/usr/include/bits/time.h" 3 4 struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; # 47 "/usr/include/sys/select.h" 2 3 4 typedef __suseconds_t suseconds_t; typedef long int __fd_mask; # 67 "/usr/include/sys/select.h" 3 4 typedef struct { __fd_mask __fds_bits[1024 / (8 * (int) sizeof (__fd_mask))]; } fd_set; typedef __fd_mask fd_mask; # 99 "/usr/include/sys/select.h" 3 4 # 109 "/usr/include/sys/select.h" 3 4 extern int select (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, struct timeval *__restrict __timeout); # 121 "/usr/include/sys/select.h" 3 4 extern int pselect (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, const struct timespec *__restrict __timeout, const __sigset_t *__restrict __sigmask); # 221 "/usr/include/sys/types.h" 2 3 4 # 1 "/usr/include/sys/sysmacros.h" 1 3 4 # 30 "/usr/include/sys/sysmacros.h" 3 4 __extension__ extern unsigned int gnu_dev_major (unsigned long long int __dev) __attribute__ ((__nothrow__)); __extension__ extern unsigned int gnu_dev_minor (unsigned long long int __dev) __attribute__ ((__nothrow__)); __extension__ extern unsigned long long int gnu_dev_makedev (unsigned int __major, unsigned int __minor) __attribute__ ((__nothrow__)); # 224 "/usr/include/sys/types.h" 2 3 4 # 235 "/usr/include/sys/types.h" 3 4 typedef __blkcnt_t blkcnt_t; typedef __fsblkcnt_t fsblkcnt_t; typedef __fsfilcnt_t fsfilcnt_t; # 270 "/usr/include/sys/types.h" 3 4 # 1 "/usr/include/bits/pthreadtypes.h" 1 3 4 # 23 "/usr/include/bits/pthreadtypes.h" 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 24 "/usr/include/bits/pthreadtypes.h" 2 3 4 # 50 "/usr/include/bits/pthreadtypes.h" 3 4 typedef unsigned long int pthread_t; typedef union { char __size[56]; long int __align; } pthread_attr_t; typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; # 76 "/usr/include/bits/pthreadtypes.h" 3 4 typedef union { struct __pthread_mutex_s { int __lock; unsigned int __count; int __owner; unsigned int __nusers; int __kind; int __spins; __pthread_list_t __list; # 101 "/usr/include/bits/pthreadtypes.h" 3 4 } __data; char __size[40]; long int __align; } pthread_mutex_t; typedef union { char __size[4]; int __align; } pthread_mutexattr_t; typedef union { struct { int __lock; unsigned int __futex; __extension__ unsigned long long int __total_seq; __extension__ unsigned long long int __wakeup_seq; __extension__ unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; __extension__ long long int __align; } pthread_cond_t; typedef union { char __size[4]; int __align; } pthread_condattr_t; typedef unsigned int pthread_key_t; typedef int pthread_once_t; typedef union { struct { int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; unsigned int __flags; } __data; # 187 "/usr/include/bits/pthreadtypes.h" 3 4 char __size[56]; long int __align; } pthread_rwlock_t; typedef union { char __size[8]; long int __align; } pthread_rwlockattr_t; typedef volatile int pthread_spinlock_t; typedef union { char __size[32]; long int __align; } pthread_barrier_t; typedef union { char __size[4]; int __align; } pthread_barrierattr_t; # 271 "/usr/include/sys/types.h" 2 3 4 # 25 "/usr/include/sys/uio.h" 2 3 4 # 1 "/usr/include/bits/uio.h" 1 3 4 # 44 "/usr/include/bits/uio.h" 3 4 struct iovec { void *iov_base; size_t iov_len; }; # 30 "/usr/include/sys/uio.h" 2 3 4 # 40 "/usr/include/sys/uio.h" 3 4 extern ssize_t readv (int __fd, __const struct iovec *__iovec, int __count) ; # 51 "/usr/include/sys/uio.h" 3 4 extern ssize_t writev (int __fd, __const struct iovec *__iovec, int __count) ; # 66 "/usr/include/sys/uio.h" 3 4 extern ssize_t preadv (int __fd, __const struct iovec *__iovec, int __count, __off_t __offset) ; # 78 "/usr/include/sys/uio.h" 3 4 extern ssize_t pwritev (int __fd, __const struct iovec *__iovec, int __count, __off_t __offset) ; # 121 "/usr/include/sys/uio.h" 3 4 # 29 "/usr/include/sys/socket.h" 2 3 4 # 1 "/opt/gcc/4.8.1/snos/lib/gcc/x86_64-suse-linux/4.8.1/include/stddef.h" 1 3 4 # 31 "/usr/include/sys/socket.h" 2 3 4 # 40 "/usr/include/sys/socket.h" 3 4 # 1 "/usr/include/bits/socket.h" 1 3 4 # 29 "/usr/include/bits/socket.h" 3 4 # 1 "/opt/gcc/4.8.1/snos/lib/gcc/x86_64-suse-linux/4.8.1/include/stddef.h" 1 3 4 # 30 "/usr/include/bits/socket.h" 2 3 4 typedef __socklen_t socklen_t; enum __socket_type { SOCK_STREAM = 1, SOCK_DGRAM = 2, SOCK_RAW = 3, SOCK_RDM = 4, SOCK_SEQPACKET = 5, SOCK_DCCP = 6, SOCK_PACKET = 10, SOCK_CLOEXEC = 02000000, SOCK_NONBLOCK = 04000 }; # 175 "/usr/include/bits/socket.h" 3 4 # 1 "/usr/include/bits/sockaddr.h" 1 3 4 # 29 "/usr/include/bits/sockaddr.h" 3 4 typedef unsigned short int sa_family_t; # 176 "/usr/include/bits/socket.h" 2 3 4 struct sockaddr { sa_family_t sa_family; char sa_data[14]; }; # 191 "/usr/include/bits/socket.h" 3 4 struct sockaddr_storage { sa_family_t ss_family; unsigned long int __ss_align; char __ss_padding[(128 - (2 * sizeof (unsigned long int)))]; }; enum { MSG_OOB = 0x01, MSG_PEEK = 0x02, MSG_DONTROUTE = 0x04, MSG_CTRUNC = 0x08, MSG_PROXY = 0x10, MSG_TRUNC = 0x20, MSG_DONTWAIT = 0x40, MSG_EOR = 0x80, MSG_WAITALL = 0x100, MSG_FIN = 0x200, MSG_SYN = 0x400, MSG_CONFIRM = 0x800, MSG_RST = 0x1000, MSG_ERRQUEUE = 0x2000, MSG_NOSIGNAL = 0x4000, MSG_MORE = 0x8000, MSG_CMSG_CLOEXEC = 0x40000000 }; struct msghdr { void *msg_name; socklen_t msg_namelen; struct iovec *msg_iov; size_t msg_iovlen; void *msg_control; size_t msg_controllen; int msg_flags; }; struct cmsghdr { size_t cmsg_len; int cmsg_level; int cmsg_type; __extension__ unsigned char __cmsg_data []; }; # 297 "/usr/include/bits/socket.h" 3 4 extern struct cmsghdr *__cmsg_nxthdr (struct msghdr *__mhdr, struct cmsghdr *__cmsg) __attribute__ ((__nothrow__)); # 324 "/usr/include/bits/socket.h" 3 4 enum { SCM_RIGHTS = 0x01 }; # 370 "/usr/include/bits/socket.h" 3 4 # 1 "/usr/include/asm/socket.h" 1 3 4 # 1 "/usr/include/asm-generic/socket.h" 1 3 4 # 1 "/usr/include/asm/sockios.h" 1 3 4 # 1 "/usr/include/asm-generic/sockios.h" 1 3 4 # 1 "/usr/include/asm/sockios.h" 2 3 4 # 5 "/usr/include/asm-generic/socket.h" 2 3 4 # 1 "/usr/include/asm/socket.h" 2 3 4 # 371 "/usr/include/bits/socket.h" 2 3 4 # 404 "/usr/include/bits/socket.h" 3 4 struct linger { int l_onoff; int l_linger; }; # 41 "/usr/include/sys/socket.h" 2 3 4 struct osockaddr { unsigned short int sa_family; unsigned char sa_data[14]; }; enum { SHUT_RD = 0, SHUT_WR, SHUT_RDWR }; # 105 "/usr/include/sys/socket.h" 3 4 extern int socket (int __domain, int __type, int __protocol) __attribute__ ((__nothrow__)); extern int socketpair (int __domain, int __type, int __protocol, int __fds[2]) __attribute__ ((__nothrow__)); extern int bind (int __fd, __const struct sockaddr * __addr, socklen_t __len) __attribute__ ((__nothrow__)); extern int getsockname (int __fd, struct sockaddr *__restrict __addr, socklen_t *__restrict __len) __attribute__ ((__nothrow__)); # 129 "/usr/include/sys/socket.h" 3 4 extern int connect (int __fd, __const struct sockaddr * __addr, socklen_t __len); extern int getpeername (int __fd, struct sockaddr *__restrict __addr, socklen_t *__restrict __len) __attribute__ ((__nothrow__)); extern ssize_t send (int __fd, __const void *__buf, size_t __n, int __flags); extern ssize_t recv (int __fd, void *__buf, size_t __n, int __flags); extern ssize_t sendto (int __fd, __const void *__buf, size_t __n, int __flags, __const struct sockaddr * __addr, socklen_t __addr_len); # 166 "/usr/include/sys/socket.h" 3 4 extern ssize_t recvfrom (int __fd, void *__restrict __buf, size_t __n, int __flags, struct sockaddr *__restrict __addr, socklen_t *__restrict __addr_len); extern ssize_t sendmsg (int __fd, __const struct msghdr *__message, int __flags); extern ssize_t recvmsg (int __fd, struct msghdr *__message, int __flags); extern int getsockopt (int __fd, int __level, int __optname, void *__restrict __optval, socklen_t *__restrict __optlen) __attribute__ ((__nothrow__)); extern int setsockopt (int __fd, int __level, int __optname, __const void *__optval, socklen_t __optlen) __attribute__ ((__nothrow__)); extern int listen (int __fd, int __n) __attribute__ ((__nothrow__)); # 214 "/usr/include/sys/socket.h" 3 4 extern int accept (int __fd, struct sockaddr *__restrict __addr, socklen_t *__restrict __addr_len); # 232 "/usr/include/sys/socket.h" 3 4 extern int shutdown (int __fd, int __how) __attribute__ ((__nothrow__)); extern int sockatmark (int __fd) __attribute__ ((__nothrow__)); extern int isfdtype (int __fd, int __fdtype) __attribute__ ((__nothrow__)); # 254 "/usr/include/sys/socket.h" 3 4 # 26 "/usr/include/netinet/in.h" 2 3 4 enum { IPPROTO_IP = 0, IPPROTO_HOPOPTS = 0, IPPROTO_ICMP = 1, IPPROTO_IGMP = 2, IPPROTO_IPIP = 4, IPPROTO_TCP = 6, IPPROTO_EGP = 8, IPPROTO_PUP = 12, IPPROTO_UDP = 17, IPPROTO_IDP = 22, IPPROTO_TP = 29, IPPROTO_DCCP = 33, IPPROTO_IPV6 = 41, IPPROTO_ROUTING = 43, IPPROTO_FRAGMENT = 44, IPPROTO_RSVP = 46, IPPROTO_GRE = 47, IPPROTO_ESP = 50, IPPROTO_AH = 51, IPPROTO_ICMPV6 = 58, IPPROTO_NONE = 59, IPPROTO_DSTOPTS = 60, IPPROTO_MTP = 92, IPPROTO_ENCAP = 98, IPPROTO_PIM = 103, IPPROTO_COMP = 108, IPPROTO_SCTP = 132, IPPROTO_UDPLITE = 136, IPPROTO_RAW = 255, IPPROTO_MAX }; typedef uint16_t in_port_t; enum { IPPORT_ECHO = 7, IPPORT_DISCARD = 9, IPPORT_SYSTAT = 11, IPPORT_DAYTIME = 13, IPPORT_NETSTAT = 15, IPPORT_FTP = 21, IPPORT_TELNET = 23, IPPORT_SMTP = 25, IPPORT_TIMESERVER = 37, IPPORT_NAMESERVER = 42, IPPORT_WHOIS = 43, IPPORT_MTP = 57, IPPORT_TFTP = 69, IPPORT_RJE = 77, IPPORT_FINGER = 79, IPPORT_TTYLINK = 87, IPPORT_SUPDUP = 95, IPPORT_EXECSERVER = 512, IPPORT_LOGINSERVER = 513, IPPORT_CMDSERVER = 514, IPPORT_EFSSERVER = 520, IPPORT_BIFFUDP = 512, IPPORT_WHOSERVER = 513, IPPORT_ROUTESERVER = 520, IPPORT_RESERVED = 1024, IPPORT_USERRESERVED = 5000 }; typedef uint32_t in_addr_t; struct in_addr { in_addr_t s_addr; }; # 198 "/usr/include/netinet/in.h" 3 4 struct in6_addr { union { uint8_t __u6_addr8[16]; uint16_t __u6_addr16[8]; uint32_t __u6_addr32[4]; } __in6_u; }; extern const struct in6_addr in6addr_any; extern const struct in6_addr in6addr_loopback; # 225 "/usr/include/netinet/in.h" 3 4 struct sockaddr_in { sa_family_t sin_family; in_port_t sin_port; struct in_addr sin_addr; unsigned char sin_zero[sizeof (struct sockaddr) - (sizeof (unsigned short int)) - sizeof (in_port_t) - sizeof (struct in_addr)]; }; struct sockaddr_in6 { sa_family_t sin6_family; in_port_t sin6_port; uint32_t sin6_flowinfo; struct in6_addr sin6_addr; uint32_t sin6_scope_id; }; struct ip_mreq { struct in_addr imr_multiaddr; struct in_addr imr_interface; }; struct ip_mreq_source { struct in_addr imr_multiaddr; struct in_addr imr_interface; struct in_addr imr_sourceaddr; }; struct ipv6_mreq { struct in6_addr ipv6mr_multiaddr; unsigned int ipv6mr_interface; }; struct group_req { uint32_t gr_interface; struct sockaddr_storage gr_group; }; struct group_source_req { uint32_t gsr_interface; struct sockaddr_storage gsr_group; struct sockaddr_storage gsr_source; }; struct ip_msfilter { struct in_addr imsf_multiaddr; struct in_addr imsf_interface; uint32_t imsf_fmode; uint32_t imsf_numsrc; struct in_addr imsf_slist[1]; }; struct group_filter { uint32_t gf_interface; struct sockaddr_storage gf_group; uint32_t gf_fmode; uint32_t gf_numsrc; struct sockaddr_storage gf_slist[1]; }; # 356 "/usr/include/netinet/in.h" 3 4 # 1 "/usr/include/bits/in.h" 1 3 4 # 86 "/usr/include/bits/in.h" 3 4 struct ip_opts { struct in_addr ip_dst; char ip_opts[40]; }; struct ip_mreqn { struct in_addr imr_multiaddr; struct in_addr imr_address; int imr_ifindex; }; struct in_pktinfo { int ipi_ifindex; struct in_addr ipi_spec_dst; struct in_addr ipi_addr; }; # 357 "/usr/include/netinet/in.h" 2 3 4 # 365 "/usr/include/netinet/in.h" 3 4 extern uint32_t ntohl (uint32_t __netlong) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern uint16_t ntohs (uint16_t __netshort) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern uint32_t htonl (uint32_t __hostlong) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); extern uint16_t htons (uint16_t __hostshort) __attribute__ ((__nothrow__)) __attribute__ ((__const__)); # 1 "/usr/include/bits/byteswap.h" 1 3 4 # 377 "/usr/include/netinet/in.h" 2 3 4 # 440 "/usr/include/netinet/in.h" 3 4 extern int bindresvport (int __sockfd, struct sockaddr_in *__sock_in) __attribute__ ((__nothrow__)); extern int bindresvport6 (int __sockfd, struct sockaddr_in6 *__sock_in) __attribute__ ((__nothrow__)); # 565 "/usr/include/netinet/in.h" 3 4 # 3 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 Defined "HAVE_NETINET_IN_H" to "1" ================================================================================ TEST checkRecursiveMacros from config.headers(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/headers.py:218) TESTING: checkRecursiveMacros from config.headers(config/BuildSystem/config/headers.py:218) Checks that the preprocessor allows recursive macros, and if not defines HAVE_BROKEN_RECURSIVE_MACRO sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" void a(int i, int j) {} #define a(b) a(b,__LINE__) int main() { a(0); ; return 0; } ================================================================================ TEST configureCacheDetails from PETSc.utilities.cacheDetails(/global/u2/m/madams/petsc_maint/config/PETSc/utilities/cacheDetails.py:78) TESTING: configureCacheDetails from PETSc.utilities.cacheDetails(config/PETSc/utilities/cacheDetails.py:78) Try to determine the size and associativity of the cache. Pushing language C All intermediate test results are stored in /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" #include long getconf_LEVEL1_DCACHE_SIZE() { long val = sysconf(_SC_LEVEL1_DCACHE_SIZE); return (16 <= val && val <= 2147483647) ? val : 32768; } int main() { ; return 0; } Popping language C Pushing language C sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" #include #include long getconf_LEVEL1_DCACHE_SIZE() { long val = sysconf(_SC_LEVEL1_DCACHE_SIZE); return (16 <= val && val <= 2147483647) ? val : 32768; } int main() { FILE *output = fopen("conftestval","w"); if (!output) return 1; fprintf(output,"%ld",getconf_LEVEL1_DCACHE_SIZE()); fclose(output);; return 0; } Pushing language C Popping language C sh: cc -o /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails/conftest.o -ldl Executing: cc -o /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails/conftest.o -ldl sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded output: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Pushing language C Popping language C in cc -o /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails/conftest.o -ldl Source: #include "confdefs.h" #include "conffix.h" #include #include long getconf_LEVEL1_DCACHE_SIZE() { long val = sysconf(_SC_LEVEL1_DCACHE_SIZE); return (16 <= val && val <= 2147483647) ? val : 32768; } int main() { FILE *output = fopen("conftestval","w"); if (!output) return 1; fprintf(output,"%ld",getconf_LEVEL1_DCACHE_SIZE()); fclose(output);; return 0; } Executing: /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails/conftest sh: /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails/conftest Executing: /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails/conftest sh: Popping language C Defined "LEVEL1_DCACHE_SIZE" to "65536" Pushing language C sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" #include #include long getconf_LEVEL1_DCACHE_LINESIZE() { long val = sysconf(_SC_LEVEL1_DCACHE_LINESIZE); return (16 <= val && val <= 2147483647) ? val : 32; } int main() { FILE *output = fopen("conftestval","w"); if (!output) return 1; fprintf(output,"%ld",getconf_LEVEL1_DCACHE_LINESIZE()); fclose(output);; return 0; } Pushing language C Popping language C sh: cc -o /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails/conftest.o -ldl Executing: cc -o /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails/conftest.o -ldl sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded output: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Pushing language C Popping language C in cc -o /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails/conftest.o -ldl Source: #include "confdefs.h" #include "conffix.h" #include #include long getconf_LEVEL1_DCACHE_LINESIZE() { long val = sysconf(_SC_LEVEL1_DCACHE_LINESIZE); return (16 <= val && val <= 2147483647) ? val : 32; } int main() { FILE *output = fopen("conftestval","w"); if (!output) return 1; fprintf(output,"%ld",getconf_LEVEL1_DCACHE_LINESIZE()); fclose(output);; return 0; } Executing: /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails/conftest sh: /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails/conftest Executing: /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails/conftest sh: Popping language C Defined "LEVEL1_DCACHE_LINESIZE" to "64" Pushing language C sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" #include #include long getconf_LEVEL1_DCACHE_ASSOC() { long val = sysconf(_SC_LEVEL1_DCACHE_ASSOC); return (0 <= val && val <= 2147483647) ? val : 2; } int main() { FILE *output = fopen("conftestval","w"); if (!output) return 1; fprintf(output,"%ld",getconf_LEVEL1_DCACHE_ASSOC()); fclose(output);; return 0; } Pushing language C Popping language C sh: cc -o /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails/conftest.o -ldl Executing: cc -o /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails/conftest.o -ldl sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded output: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Pushing language C Popping language C in cc -o /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails/conftest.o -ldl Source: #include "confdefs.h" #include "conffix.h" #include #include long getconf_LEVEL1_DCACHE_ASSOC() { long val = sysconf(_SC_LEVEL1_DCACHE_ASSOC); return (0 <= val && val <= 2147483647) ? val : 2; } int main() { FILE *output = fopen("conftestval","w"); if (!output) return 1; fprintf(output,"%ld",getconf_LEVEL1_DCACHE_ASSOC()); fclose(output);; return 0; } Executing: /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails/conftest sh: /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails/conftest Executing: /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails/conftest sh: Popping language C Defined "LEVEL1_DCACHE_ASSOC" to "2" ================================================================================ TEST checkMemcmp from config.functions(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/functions.py:78) TESTING: checkMemcmp from config.functions(config/BuildSystem/config/functions.py:78) Check for 8-bit clean memcmp All intermediate test results are stored in /scratch/scratchdirs/madams/petsc-i5209_/config.functions sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" #include void exit(int); int main() { char c0 = 0x40; char c1 = (char) 0x80; char c2 = (char) 0x81; exit(memcmp(&c0, &c2, 1) < 0 && memcmp(&c1, &c2, 1) < 0 ? 0 : 1); ; return 0; } Pushing language C Popping language C sh: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Executing: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded output: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Pushing language C Popping language C in cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Source: #include "confdefs.h" #include "conffix.h" #include void exit(int); int main() { char c0 = 0x40; char c1 = (char) 0x80; char c2 = (char) 0x81; exit(memcmp(&c0, &c2, 1) < 0 && memcmp(&c1, &c2, 1) < 0 ? 0 : 1); ; return 0; } Executing: /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest sh: /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest Executing: /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest sh: ================================================================================ TEST checkSysinfo from config.functions(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/functions.py:102) TESTING: checkSysinfo from config.functions(config/BuildSystem/config/functions.py:102) Check whether sysinfo takes three arguments, and if it does define HAVE_SYSINFO_3ARG Checking for function sysinfo sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char sysinfo(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char sysinfo(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_sysinfo) || defined (__stub___sysinfo) choke me #else sysinfo(); #endif ; return 0; } Pushing language C Popping language C sh: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Executing: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded output: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Pushing language C Popping language C in cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char sysinfo(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char sysinfo(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_sysinfo) || defined (__stub___sysinfo) choke me #else sysinfo(); #endif ; return 0; } Defined "HAVE_SYSINFO" to "1" Checking for header: linux/kernel.h sh: gcc -E -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c Executing: gcc -E -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c sh: # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" # 1 "" # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/confdefs.h" 1 # 2 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conffix.h" 1 # 3 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 # 1 "/usr/include/linux/kernel.h" 1 3 4 # 11 "/usr/include/linux/kernel.h" 3 4 struct sysinfo { long uptime; unsigned long loads[3]; unsigned long totalram; unsigned long freeram; unsigned long sharedram; unsigned long bufferram; unsigned long totalswap; unsigned long freeswap; unsigned short procs; unsigned short pad; unsigned long totalhigh; unsigned long freehigh; unsigned int mem_unit; char _f[20-2*sizeof(long)-sizeof(int)]; }; # 3 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 Defined "HAVE_LINUX_KERNEL_H" to "1" Checking for header: sys/sysinfo.h sh: gcc -E -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c Executing: gcc -E -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c sh: # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" # 1 "" # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/confdefs.h" 1 # 2 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conffix.h" 1 # 3 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 # 1 "/usr/include/sys/sysinfo.h" 1 3 4 # 22 "/usr/include/sys/sysinfo.h" 3 4 # 1 "/usr/include/features.h" 1 3 4 # 347 "/usr/include/features.h" 3 4 # 1 "/usr/include/sys/cdefs.h" 1 3 4 # 353 "/usr/include/sys/cdefs.h" 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 354 "/usr/include/sys/cdefs.h" 2 3 4 # 348 "/usr/include/features.h" 2 3 4 # 371 "/usr/include/features.h" 3 4 # 1 "/usr/include/gnu/stubs.h" 1 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 5 "/usr/include/gnu/stubs.h" 2 3 4 # 1 "/usr/include/gnu/stubs-64.h" 1 3 4 # 10 "/usr/include/gnu/stubs.h" 2 3 4 # 372 "/usr/include/features.h" 2 3 4 # 23 "/usr/include/sys/sysinfo.h" 2 3 4 # 1 "/usr/include/linux/kernel.h" 1 3 4 # 11 "/usr/include/linux/kernel.h" 3 4 struct sysinfo { long uptime; unsigned long loads[3]; unsigned long totalram; unsigned long freeram; unsigned long sharedram; unsigned long bufferram; unsigned long totalswap; unsigned long freeswap; unsigned short procs; unsigned short pad; unsigned long totalhigh; unsigned long freehigh; unsigned int mem_unit; char _f[20-2*sizeof(long)-sizeof(int)]; }; # 26 "/usr/include/sys/sysinfo.h" 2 3 4 extern int sysinfo (struct sysinfo *__info) __attribute__ ((__nothrow__)); extern int get_nprocs_conf (void) __attribute__ ((__nothrow__)); extern int get_nprocs (void) __attribute__ ((__nothrow__)); extern long int get_phys_pages (void) __attribute__ ((__nothrow__)); extern long int get_avphys_pages (void) __attribute__ ((__nothrow__)); # 3 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 Defined "HAVE_SYS_SYSINFO_H" to "1" Checking for header: sys/systeminfo.h sh: gcc -E -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c Executing: gcc -E -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c sh: # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" # 1 "" # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/confdefs.h" 1 # 2 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conffix.h" 1 # 3 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 Possible ERROR while running preprocessor: /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c:3:28: fatal error: sys/systeminfo.h: No such file or directory #include ^ compilation terminated. ret = 256 error message = {/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c:3:28: fatal error: sys/systeminfo.h: No such file or directory #include ^ compilation terminated. } Source: #include "confdefs.h" #include "conffix.h" #include sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c sh: Possible ERROR while running compiler: ret = 256 error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c:13:4: error: #error "Cannot check sysinfo without special headers" # error "Cannot check sysinfo without special headers" ^ /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c: In function 'main': /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c:17:1: warning: implicit declaration of function 'sysinfo' [-Wimplicit-function-declaration] char buf[10]; long count=10; sysinfo(1, buf, count); ^ } Source: #include "confdefs.h" #include "conffix.h" #ifdef HAVE_LINUX_KERNEL_H # include # include # ifdef HAVE_SYS_SYSINFO_H # include # endif #elif defined(HAVE_SYS_SYSTEMINFO_H) # include #else # error "Cannot check sysinfo without special headers" #endif int main() { char buf[10]; long count=10; sysinfo(1, buf, count); ; return 0; } Compile failed inside link ================================================================================ TEST checkVPrintf from config.functions(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/functions.py:125) TESTING: checkVPrintf from config.functions(config/BuildSystem/config/functions.py:125) Checks whether vprintf requires a char * last argument, and if it does defines HAVE_VPRINTF_CHAR Checking for function vprintf sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c:10:6: warning: conflicting types for built-in function 'vprintf' [enabled by default] char vprintf(); ^ } Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char vprintf(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char vprintf(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_vprintf) || defined (__stub___vprintf) choke me #else vprintf(); #endif ; return 0; } Pushing language C Popping language C sh: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Executing: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded output: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Pushing language C Popping language C in cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char vprintf(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char vprintf(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_vprintf) || defined (__stub___vprintf) choke me #else vprintf(); #endif ; return 0; } Defined "HAVE_VPRINTF" to "1" sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" #include #include int main() { va_list Argp; vprintf( "%d", Argp ); ; return 0; } Pushing language C Popping language C sh: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Executing: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded output: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Pushing language C Popping language C in cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Source: #include "confdefs.h" #include "conffix.h" #include #include int main() { va_list Argp; vprintf( "%d", Argp ); ; return 0; } ================================================================================ TEST checkVFPrintf from config.functions(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/functions.py:132) TESTING: checkVFPrintf from config.functions(config/BuildSystem/config/functions.py:132) Checks whether vfprintf requires a char * last argument, and if it does defines HAVE_VFPRINTF_CHAR Checking for function vfprintf sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c:10:6: warning: conflicting types for built-in function 'vfprintf' [enabled by default] char vfprintf(); ^ } Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char vfprintf(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char vfprintf(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_vfprintf) || defined (__stub___vfprintf) choke me #else vfprintf(); #endif ; return 0; } Pushing language C Popping language C sh: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Executing: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded output: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Pushing language C Popping language C in cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char vfprintf(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char vfprintf(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_vfprintf) || defined (__stub___vfprintf) choke me #else vfprintf(); #endif ; return 0; } Defined "HAVE_VFPRINTF" to "1" sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" #include #include int main() { va_list Argp; vfprintf(stdout, "%d", Argp ); ; return 0; } Pushing language C Popping language C sh: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Executing: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded output: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Pushing language C Popping language C in cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Source: #include "confdefs.h" #include "conffix.h" #include #include int main() { va_list Argp; vfprintf(stdout, "%d", Argp ); ; return 0; } ================================================================================ TEST checkVSNPrintf from config.functions(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/functions.py:139) TESTING: checkVSNPrintf from config.functions(config/BuildSystem/config/functions.py:139) Checks whether vsnprintf requires a char * last argument, and if it does defines HAVE_VSNPRINTF_CHAR Checking for function _vsnprintf sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char _vsnprintf(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _vsnprintf(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub__vsnprintf) || defined (__stub____vsnprintf) choke me #else _vsnprintf(); #endif ; return 0; } Pushing language C Popping language C sh: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Executing: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o: In function `main': conftest.c:(.text.startup+0x7): undefined reference to `_vsnprintf' /usr/bin/ld: link errors found, deleting executable `/scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest' collect2: error: ld returned 1 exit status output: ret = 256 error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o: In function `main': conftest.c:(.text.startup+0x7): undefined reference to `_vsnprintf' /usr/bin/ld: link errors found, deleting executable `/scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest' collect2: error: ld returned 1 exit status } Pushing language C Popping language C in cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char _vsnprintf(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _vsnprintf(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub__vsnprintf) || defined (__stub____vsnprintf) choke me #else _vsnprintf(); #endif ; return 0; } Checking for function vsnprintf sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c:10:6: warning: conflicting types for built-in function 'vsnprintf' [enabled by default] char vsnprintf(); ^ } Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char vsnprintf(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char vsnprintf(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_vsnprintf) || defined (__stub___vsnprintf) choke me #else vsnprintf(); #endif ; return 0; } Pushing language C Popping language C sh: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Executing: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded output: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Pushing language C Popping language C in cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char vsnprintf(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char vsnprintf(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_vsnprintf) || defined (__stub___vsnprintf) choke me #else vsnprintf(); #endif ; return 0; } Defined "HAVE_VSNPRINTF" to "1" sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" #include #include int main() { va_list Argp;char str[6]; vsnprintf(str,5, "%d", Argp ); ; return 0; } Pushing language C Popping language C sh: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Executing: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded output: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Pushing language C Popping language C in cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Source: #include "confdefs.h" #include "conffix.h" #include #include int main() { va_list Argp;char str[6]; vsnprintf(str,5, "%d", Argp ); ; return 0; } ================================================================================ TEST checkNanosleep from config.functions(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/functions.py:183) TESTING: checkNanosleep from config.functions(config/BuildSystem/config/functions.py:183) Check for functional nanosleep() - as time.h behaves differently for different compiler flags - like -std=c89 sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" #include int main() { struct timespec tp; tp.tv_sec = 0; tp.tv_nsec = (long)(1e9); nanosleep(&tp,0); ; return 0; } Pushing language C Popping language C sh: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Executing: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded output: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Pushing language C Popping language C in cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Source: #include "confdefs.h" #include "conffix.h" #include int main() { struct timespec tp; tp.tv_sec = 0; tp.tv_nsec = (long)(1e9); nanosleep(&tp,0); ; return 0; } Defined "HAVE_NANOSLEEP" to "1" ================================================================================ TEST checkSignalHandlerType from config.functions(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/functions.py:159) TESTING: checkSignalHandlerType from config.functions(config/BuildSystem/config/functions.py:159) Checks the type of C++ signals handlers, and defines SIGNAL_CAST to the correct value Pushing language Cxx sh: CC -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.cc Executing: CC -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.cc sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" #include static void myhandler(int sig) {} int main() { signal(SIGFPE,myhandler); ; return 0; } Pushing language CXX Popping language CXX sh: CC -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Executing: CC -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded output: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Pushing language CXX Popping language CXX in CC -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Source: #include "confdefs.h" #include "conffix.h" #include static void myhandler(int sig) {} int main() { signal(SIGFPE,myhandler); ; return 0; } Defined "SIGNAL_CAST" to " " Popping language Cxx ================================================================================ TEST checkFreeReturnType from config.functions(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/functions.py:169) TESTING: checkFreeReturnType from config.functions(config/BuildSystem/config/functions.py:169) Checks whether free returns void or int, and defines HAVE_FREE_RETURN_INT sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c sh: Possible ERROR while running compiler: ret = 256 error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c: In function 'main': /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c:6:25: error: void value not ignored as it ought to be int ierr; void *p; ierr = free(p); return 0; ^ /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c:6:5: warning: variable 'ierr' set but not used [-Wunused-but-set-variable] int ierr; void *p; ierr = free(p); return 0; ^ } Source: #include "confdefs.h" #include "conffix.h" #include int main() { int ierr; void *p; ierr = free(p); return 0; ; return 0; } Compile failed inside link ================================================================================ TEST checkVariableArgumentLists from config.functions(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/functions.py:175) TESTING: checkVariableArgumentLists from config.functions(config/BuildSystem/config/functions.py:175) Checks whether the variable argument list functionality is working sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" #include int main() { va_list l1, l2; va_copy(l1, l2); return 0; ; return 0; } Pushing language C Popping language C sh: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Executing: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded output: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Pushing language C Popping language C in cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Source: #include "confdefs.h" #include "conffix.h" #include int main() { va_list l1, l2; va_copy(l1, l2); return 0; ; return 0; } Defined "HAVE_VA_COPY" to "1" ================================================================================ TEST check from config.functions(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function rand sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char rand(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char rand(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_rand) || defined (__stub___rand) choke me #else rand(); #endif ; return 0; } Pushing language C Popping language C sh: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Executing: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded output: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Pushing language C Popping language C in cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char rand(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char rand(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_rand) || defined (__stub___rand) choke me #else rand(); #endif ; return 0; } Defined "HAVE_RAND" to "1" ================================================================================ TEST check from config.functions(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function getdomainname sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char getdomainname(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char getdomainname(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_getdomainname) || defined (__stub___getdomainname) choke me #else getdomainname(); #endif ; return 0; } Pushing language C Popping language C sh: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Executing: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded output: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Pushing language C Popping language C in cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char getdomainname(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char getdomainname(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_getdomainname) || defined (__stub___getdomainname) choke me #else getdomainname(); #endif ; return 0; } Defined "HAVE_GETDOMAINNAME" to "1" ================================================================================ TEST check from config.functions(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function _sleep sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char _sleep(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _sleep(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub__sleep) || defined (__stub____sleep) choke me #else _sleep(); #endif ; return 0; } Pushing language C Popping language C sh: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Executing: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o: In function `main': conftest.c:(.text.startup+0x7): undefined reference to `_sleep' /usr/bin/ld: link errors found, deleting executable `/scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest' collect2: error: ld returned 1 exit status output: ret = 256 error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o: In function `main': conftest.c:(.text.startup+0x7): undefined reference to `_sleep' /usr/bin/ld: link errors found, deleting executable `/scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest' collect2: error: ld returned 1 exit status } Pushing language C Popping language C in cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char _sleep(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _sleep(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub__sleep) || defined (__stub____sleep) choke me #else _sleep(); #endif ; return 0; } ================================================================================ TEST check from config.functions(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function snprintf sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c:10:6: warning: conflicting types for built-in function 'snprintf' [enabled by default] char snprintf(); ^ } Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char snprintf(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char snprintf(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_snprintf) || defined (__stub___snprintf) choke me #else snprintf(); #endif ; return 0; } Pushing language C Popping language C sh: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Executing: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded output: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Pushing language C Popping language C in cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char snprintf(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char snprintf(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_snprintf) || defined (__stub___snprintf) choke me #else snprintf(); #endif ; return 0; } Defined "HAVE_SNPRINTF" to "1" ================================================================================ TEST check from config.functions(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function realpath sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char realpath(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char realpath(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_realpath) || defined (__stub___realpath) choke me #else realpath(); #endif ; return 0; } Pushing language C Popping language C sh: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Executing: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded output: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Pushing language C Popping language C in cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char realpath(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char realpath(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_realpath) || defined (__stub___realpath) choke me #else realpath(); #endif ; return 0; } Defined "HAVE_REALPATH" to "1" ================================================================================ TEST check from config.functions(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function dlsym sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char dlsym(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char dlsym(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_dlsym) || defined (__stub___dlsym) choke me #else dlsym(); #endif ; return 0; } Pushing language C Popping language C sh: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Executing: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded output: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Pushing language C Popping language C in cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char dlsym(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char dlsym(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_dlsym) || defined (__stub___dlsym) choke me #else dlsym(); #endif ; return 0; } Defined "HAVE_DLSYM" to "1" ================================================================================ TEST check from config.functions(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function bzero sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c:10:6: warning: conflicting types for built-in function 'bzero' [enabled by default] char bzero(); ^ } Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char bzero(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char bzero(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_bzero) || defined (__stub___bzero) choke me #else bzero(); #endif ; return 0; } Pushing language C Popping language C sh: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Executing: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded output: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Pushing language C Popping language C in cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char bzero(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char bzero(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_bzero) || defined (__stub___bzero) choke me #else bzero(); #endif ; return 0; } Defined "HAVE_BZERO" to "1" ================================================================================ TEST check from config.functions(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function _getcwd sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char _getcwd(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _getcwd(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub__getcwd) || defined (__stub____getcwd) choke me #else _getcwd(); #endif ; return 0; } Pushing language C Popping language C sh: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Executing: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o: In function `main': conftest.c:(.text.startup+0x7): undefined reference to `_getcwd' /usr/bin/ld: link errors found, deleting executable `/scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest' collect2: error: ld returned 1 exit status output: ret = 256 error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o: In function `main': conftest.c:(.text.startup+0x7): undefined reference to `_getcwd' /usr/bin/ld: link errors found, deleting executable `/scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest' collect2: error: ld returned 1 exit status } Pushing language C Popping language C in cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char _getcwd(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _getcwd(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub__getcwd) || defined (__stub____getcwd) choke me #else _getcwd(); #endif ; return 0; } ================================================================================ TEST check from config.functions(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function getwd sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char getwd(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char getwd(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_getwd) || defined (__stub___getwd) choke me #else getwd(); #endif ; return 0; } Pushing language C Popping language C sh: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Executing: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o: In function `main': conftest.c:(.text.startup+0x7): warning: the `getwd' function is dangerous and should not be used. output: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o: In function `main': conftest.c:(.text.startup+0x7): warning: the `getwd' function is dangerous and should not be used. } Pushing language C Popping language C in cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char getwd(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char getwd(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_getwd) || defined (__stub___getwd) choke me #else getwd(); #endif ; return 0; } Defined "HAVE_GETWD" to "1" ================================================================================ TEST check from config.functions(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function uname sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char uname(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char uname(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_uname) || defined (__stub___uname) choke me #else uname(); #endif ; return 0; } Pushing language C Popping language C sh: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Executing: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded output: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Pushing language C Popping language C in cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char uname(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char uname(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_uname) || defined (__stub___uname) choke me #else uname(); #endif ; return 0; } Defined "HAVE_UNAME" to "1" ================================================================================ TEST check from config.functions(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function _lseek sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char _lseek(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _lseek(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub__lseek) || defined (__stub____lseek) choke me #else _lseek(); #endif ; return 0; } Pushing language C Popping language C sh: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Executing: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o: In function `main': conftest.c:(.text.startup+0x7): undefined reference to `_lseek' /usr/bin/ld: link errors found, deleting executable `/scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest' collect2: error: ld returned 1 exit status output: ret = 256 error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o: In function `main': conftest.c:(.text.startup+0x7): undefined reference to `_lseek' /usr/bin/ld: link errors found, deleting executable `/scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest' collect2: error: ld returned 1 exit status } Pushing language C Popping language C in cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char _lseek(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _lseek(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub__lseek) || defined (__stub____lseek) choke me #else _lseek(); #endif ; return 0; } ================================================================================ TEST check from config.functions(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function sleep sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char sleep(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char sleep(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_sleep) || defined (__stub___sleep) choke me #else sleep(); #endif ; return 0; } Pushing language C Popping language C sh: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Executing: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded output: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Pushing language C Popping language C in cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char sleep(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char sleep(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_sleep) || defined (__stub___sleep) choke me #else sleep(); #endif ; return 0; } Defined "HAVE_SLEEP" to "1" ================================================================================ TEST check from config.functions(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function _access sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char _access(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _access(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub__access) || defined (__stub____access) choke me #else _access(); #endif ; return 0; } Pushing language C Popping language C sh: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Executing: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o: In function `main': conftest.c:(.text.startup+0x7): undefined reference to `_access' /usr/bin/ld: link errors found, deleting executable `/scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest' collect2: error: ld returned 1 exit status output: ret = 256 error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o: In function `main': conftest.c:(.text.startup+0x7): undefined reference to `_access' /usr/bin/ld: link errors found, deleting executable `/scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest' collect2: error: ld returned 1 exit status } Pushing language C Popping language C in cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char _access(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _access(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub__access) || defined (__stub____access) choke me #else _access(); #endif ; return 0; } ================================================================================ TEST check from config.functions(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function lseek sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char lseek(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char lseek(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_lseek) || defined (__stub___lseek) choke me #else lseek(); #endif ; return 0; } Pushing language C Popping language C sh: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Executing: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded output: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Pushing language C Popping language C in cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char lseek(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char lseek(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_lseek) || defined (__stub___lseek) choke me #else lseek(); #endif ; return 0; } Defined "HAVE_LSEEK" to "1" ================================================================================ TEST check from config.functions(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function usleep sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char usleep(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char usleep(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_usleep) || defined (__stub___usleep) choke me #else usleep(); #endif ; return 0; } Pushing language C Popping language C sh: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Executing: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded output: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Pushing language C Popping language C in cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char usleep(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char usleep(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_usleep) || defined (__stub___usleep) choke me #else usleep(); #endif ; return 0; } Defined "HAVE_USLEEP" to "1" ================================================================================ TEST check from config.functions(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function _intel_fast_memset sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char _intel_fast_memset(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _intel_fast_memset(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub__intel_fast_memset) || defined (__stub____intel_fast_memset) choke me #else _intel_fast_memset(); #endif ; return 0; } Pushing language C Popping language C sh: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Executing: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o: In function `main': conftest.c:(.text.startup+0x7): undefined reference to `_intel_fast_memset' /usr/bin/ld: link errors found, deleting executable `/scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest' collect2: error: ld returned 1 exit status output: ret = 256 error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o: In function `main': conftest.c:(.text.startup+0x7): undefined reference to `_intel_fast_memset' /usr/bin/ld: link errors found, deleting executable `/scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest' collect2: error: ld returned 1 exit status } Pushing language C Popping language C in cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char _intel_fast_memset(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _intel_fast_memset(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub__intel_fast_memset) || defined (__stub____intel_fast_memset) choke me #else _intel_fast_memset(); #endif ; return 0; } ================================================================================ TEST check from config.functions(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function dlclose sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char dlclose(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char dlclose(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_dlclose) || defined (__stub___dlclose) choke me #else dlclose(); #endif ; return 0; } Pushing language C Popping language C sh: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Executing: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded output: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Pushing language C Popping language C in cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char dlclose(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char dlclose(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_dlclose) || defined (__stub___dlclose) choke me #else dlclose(); #endif ; return 0; } Defined "HAVE_DLCLOSE" to "1" ================================================================================ TEST check from config.functions(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function gethostname sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char gethostname(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char gethostname(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_gethostname) || defined (__stub___gethostname) choke me #else gethostname(); #endif ; return 0; } Pushing language C Popping language C sh: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Executing: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded output: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Pushing language C Popping language C in cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char gethostname(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char gethostname(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_gethostname) || defined (__stub___gethostname) choke me #else gethostname(); #endif ; return 0; } Defined "HAVE_GETHOSTNAME" to "1" ================================================================================ TEST check from config.functions(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function clock sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char clock(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char clock(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_clock) || defined (__stub___clock) choke me #else clock(); #endif ; return 0; } Pushing language C Popping language C sh: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Executing: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded output: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Pushing language C Popping language C in cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char clock(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char clock(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_clock) || defined (__stub___clock) choke me #else clock(); #endif ; return 0; } Defined "HAVE_CLOCK" to "1" ================================================================================ TEST check from config.functions(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function get_nprocs sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char get_nprocs(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char get_nprocs(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_get_nprocs) || defined (__stub___get_nprocs) choke me #else get_nprocs(); #endif ; return 0; } Pushing language C Popping language C sh: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Executing: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded output: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Pushing language C Popping language C in cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char get_nprocs(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char get_nprocs(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_get_nprocs) || defined (__stub___get_nprocs) choke me #else get_nprocs(); #endif ; return 0; } Defined "HAVE_GET_NPROCS" to "1" ================================================================================ TEST check from config.functions(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function access sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char access(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char access(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_access) || defined (__stub___access) choke me #else access(); #endif ; return 0; } Pushing language C Popping language C sh: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Executing: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded output: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Pushing language C Popping language C in cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char access(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char access(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_access) || defined (__stub___access) choke me #else access(); #endif ; return 0; } Defined "HAVE_ACCESS" to "1" ================================================================================ TEST check from config.functions(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function _snprintf sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char _snprintf(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _snprintf(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub__snprintf) || defined (__stub____snprintf) choke me #else _snprintf(); #endif ; return 0; } Pushing language C Popping language C sh: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Executing: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o: In function `main': conftest.c:(.text.startup+0x7): undefined reference to `_snprintf' /usr/bin/ld: link errors found, deleting executable `/scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest' collect2: error: ld returned 1 exit status output: ret = 256 error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o: In function `main': conftest.c:(.text.startup+0x7): undefined reference to `_snprintf' /usr/bin/ld: link errors found, deleting executable `/scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest' collect2: error: ld returned 1 exit status } Pushing language C Popping language C in cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char _snprintf(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _snprintf(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub__snprintf) || defined (__stub____snprintf) choke me #else _snprintf(); #endif ; return 0; } ================================================================================ TEST check from config.functions(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function dlerror sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char dlerror(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char dlerror(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_dlerror) || defined (__stub___dlerror) choke me #else dlerror(); #endif ; return 0; } Pushing language C Popping language C sh: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Executing: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded output: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Pushing language C Popping language C in cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char dlerror(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char dlerror(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_dlerror) || defined (__stub___dlerror) choke me #else dlerror(); #endif ; return 0; } Defined "HAVE_DLERROR" to "1" ================================================================================ TEST check from config.functions(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function mkstemp sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char mkstemp(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char mkstemp(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_mkstemp) || defined (__stub___mkstemp) choke me #else mkstemp(); #endif ; return 0; } Pushing language C Popping language C sh: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Executing: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded output: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Pushing language C Popping language C in cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char mkstemp(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char mkstemp(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_mkstemp) || defined (__stub___mkstemp) choke me #else mkstemp(); #endif ; return 0; } Defined "HAVE_MKSTEMP" to "1" ================================================================================ TEST check from config.functions(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function fork sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c:10:6: warning: conflicting types for built-in function 'fork' [enabled by default] char fork(); ^ } Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char fork(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char fork(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_fork) || defined (__stub___fork) choke me #else fork(); #endif ; return 0; } Pushing language C Popping language C sh: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Executing: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded output: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Pushing language C Popping language C in cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char fork(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char fork(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_fork) || defined (__stub___fork) choke me #else fork(); #endif ; return 0; } Defined "HAVE_FORK" to "1" ================================================================================ TEST check from config.functions(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function getpagesize sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char getpagesize(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char getpagesize(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_getpagesize) || defined (__stub___getpagesize) choke me #else getpagesize(); #endif ; return 0; } Pushing language C Popping language C sh: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Executing: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded output: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Pushing language C Popping language C in cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char getpagesize(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char getpagesize(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_getpagesize) || defined (__stub___getpagesize) choke me #else getpagesize(); #endif ; return 0; } Defined "HAVE_GETPAGESIZE" to "1" ================================================================================ TEST check from config.functions(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function sbreak sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char sbreak(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char sbreak(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_sbreak) || defined (__stub___sbreak) choke me #else sbreak(); #endif ; return 0; } Pushing language C Popping language C sh: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Executing: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o: In function `main': conftest.c:(.text.startup+0x7): undefined reference to `sbreak' /usr/bin/ld: link errors found, deleting executable `/scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest' collect2: error: ld returned 1 exit status output: ret = 256 error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o: In function `main': conftest.c:(.text.startup+0x7): undefined reference to `sbreak' /usr/bin/ld: link errors found, deleting executable `/scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest' collect2: error: ld returned 1 exit status } Pushing language C Popping language C in cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char sbreak(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char sbreak(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_sbreak) || defined (__stub___sbreak) choke me #else sbreak(); #endif ; return 0; } ================================================================================ TEST check from config.functions(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function memalign sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char memalign(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char memalign(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_memalign) || defined (__stub___memalign) choke me #else memalign(); #endif ; return 0; } Pushing language C Popping language C sh: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Executing: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded output: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Pushing language C Popping language C in cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char memalign(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char memalign(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_memalign) || defined (__stub___memalign) choke me #else memalign(); #endif ; return 0; } Defined "HAVE_MEMALIGN" to "1" ================================================================================ TEST check from config.functions(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function sigset sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char sigset(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char sigset(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_sigset) || defined (__stub___sigset) choke me #else sigset(); #endif ; return 0; } Pushing language C Popping language C sh: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Executing: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded output: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Pushing language C Popping language C in cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char sigset(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char sigset(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_sigset) || defined (__stub___sigset) choke me #else sigset(); #endif ; return 0; } Defined "HAVE_SIGSET" to "1" ================================================================================ TEST check from config.functions(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function getcwd sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char getcwd(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char getcwd(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_getcwd) || defined (__stub___getcwd) choke me #else getcwd(); #endif ; return 0; } Pushing language C Popping language C sh: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Executing: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded output: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Pushing language C Popping language C in cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char getcwd(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char getcwd(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_getcwd) || defined (__stub___getcwd) choke me #else getcwd(); #endif ; return 0; } Defined "HAVE_GETCWD" to "1" ================================================================================ TEST check from config.functions(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function gethostbyname sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char gethostbyname(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char gethostbyname(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_gethostbyname) || defined (__stub___gethostbyname) choke me #else gethostbyname(); #endif ; return 0; } Pushing language C Popping language C sh: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Executing: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o: In function `main': conftest.c:(.text.startup+0x7): warning: Using 'gethostbyname' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking output: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o: In function `main': conftest.c:(.text.startup+0x7): warning: Using 'gethostbyname' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking } Pushing language C Popping language C in cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char gethostbyname(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char gethostbyname(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_gethostbyname) || defined (__stub___gethostbyname) choke me #else gethostbyname(); #endif ; return 0; } Defined "HAVE_GETHOSTBYNAME" to "1" ================================================================================ TEST check from config.functions(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function gettimeofday sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char gettimeofday(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char gettimeofday(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_gettimeofday) || defined (__stub___gettimeofday) choke me #else gettimeofday(); #endif ; return 0; } Pushing language C Popping language C sh: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Executing: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded output: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Pushing language C Popping language C in cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char gettimeofday(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char gettimeofday(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_gettimeofday) || defined (__stub___gettimeofday) choke me #else gettimeofday(); #endif ; return 0; } Defined "HAVE_GETTIMEOFDAY" to "1" ================================================================================ TEST check from config.functions(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function readlink sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char readlink(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char readlink(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_readlink) || defined (__stub___readlink) choke me #else readlink(); #endif ; return 0; } Pushing language C Popping language C sh: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Executing: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded output: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Pushing language C Popping language C in cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char readlink(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char readlink(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_readlink) || defined (__stub___readlink) choke me #else readlink(); #endif ; return 0; } Defined "HAVE_READLINK" to "1" ================================================================================ TEST check from config.functions(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function PXFGETARG sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char PXFGETARG(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char PXFGETARG(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_PXFGETARG) || defined (__stub___PXFGETARG) choke me #else PXFGETARG(); #endif ; return 0; } Pushing language C Popping language C sh: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Executing: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o: In function `main': conftest.c:(.text.startup+0x7): undefined reference to `PXFGETARG' /usr/bin/ld: link errors found, deleting executable `/scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest' collect2: error: ld returned 1 exit status output: ret = 256 error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o: In function `main': conftest.c:(.text.startup+0x7): undefined reference to `PXFGETARG' /usr/bin/ld: link errors found, deleting executable `/scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest' collect2: error: ld returned 1 exit status } Pushing language C Popping language C in cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char PXFGETARG(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char PXFGETARG(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_PXFGETARG) || defined (__stub___PXFGETARG) choke me #else PXFGETARG(); #endif ; return 0; } ================================================================================ TEST check from config.functions(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function sigaction sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char sigaction(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char sigaction(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_sigaction) || defined (__stub___sigaction) choke me #else sigaction(); #endif ; return 0; } Pushing language C Popping language C sh: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Executing: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded output: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Pushing language C Popping language C in cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char sigaction(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char sigaction(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_sigaction) || defined (__stub___sigaction) choke me #else sigaction(); #endif ; return 0; } Defined "HAVE_SIGACTION" to "1" ================================================================================ TEST check from config.functions(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function strcasecmp sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c:10:6: warning: conflicting types for built-in function 'strcasecmp' [enabled by default] char strcasecmp(); ^ } Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char strcasecmp(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char strcasecmp(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_strcasecmp) || defined (__stub___strcasecmp) choke me #else strcasecmp(); #endif ; return 0; } Pushing language C Popping language C sh: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Executing: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded output: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Pushing language C Popping language C in cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char strcasecmp(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char strcasecmp(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_strcasecmp) || defined (__stub___strcasecmp) choke me #else strcasecmp(); #endif ; return 0; } Defined "HAVE_STRCASECMP" to "1" ================================================================================ TEST check from config.functions(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function dlopen sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char dlopen(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char dlopen(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_dlopen) || defined (__stub___dlopen) choke me #else dlopen(); #endif ; return 0; } Pushing language C Popping language C sh: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Executing: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o: In function `main': conftest.c:(.text.startup+0x7): warning: Using 'dlopen' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking output: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o: In function `main': conftest.c:(.text.startup+0x7): warning: Using 'dlopen' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking } Pushing language C Popping language C in cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char dlopen(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char dlopen(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_dlopen) || defined (__stub___dlopen) choke me #else dlopen(); #endif ; return 0; } Defined "HAVE_DLOPEN" to "1" ================================================================================ TEST check from config.functions(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function drand48 sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char drand48(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char drand48(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_drand48) || defined (__stub___drand48) choke me #else drand48(); #endif ; return 0; } Pushing language C Popping language C sh: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Executing: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded output: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Pushing language C Popping language C in cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char drand48(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char drand48(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_drand48) || defined (__stub___drand48) choke me #else drand48(); #endif ; return 0; } Defined "HAVE_DRAND48" to "1" ================================================================================ TEST check from config.functions(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function socket sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char socket(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char socket(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_socket) || defined (__stub___socket) choke me #else socket(); #endif ; return 0; } Pushing language C Popping language C sh: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Executing: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded output: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Pushing language C Popping language C in cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char socket(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char socket(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_socket) || defined (__stub___socket) choke me #else socket(); #endif ; return 0; } Defined "HAVE_SOCKET" to "1" ================================================================================ TEST check from config.functions(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function memmove sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c:10:6: warning: conflicting types for built-in function 'memmove' [enabled by default] char memmove(); ^ } Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char memmove(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char memmove(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_memmove) || defined (__stub___memmove) choke me #else memmove(); #endif ; return 0; } Pushing language C Popping language C sh: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Executing: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded output: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Pushing language C Popping language C in cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char memmove(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char memmove(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_memmove) || defined (__stub___memmove) choke me #else memmove(); #endif ; return 0; } Defined "HAVE_MEMMOVE" to "1" ================================================================================ TEST check from config.functions(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function signal sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char signal(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char signal(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_signal) || defined (__stub___signal) choke me #else signal(); #endif ; return 0; } Pushing language C Popping language C sh: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Executing: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded output: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Pushing language C Popping language C in cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char signal(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char signal(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_signal) || defined (__stub___signal) choke me #else signal(); #endif ; return 0; } Defined "HAVE_SIGNAL" to "1" ================================================================================ TEST check from config.functions(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function popen sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char popen(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char popen(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_popen) || defined (__stub___popen) choke me #else popen(); #endif ; return 0; } Pushing language C Popping language C sh: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Executing: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded output: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Pushing language C Popping language C in cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char popen(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char popen(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_popen) || defined (__stub___popen) choke me #else popen(); #endif ; return 0; } Defined "HAVE_POPEN" to "1" ================================================================================ TEST check from config.functions(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function getrusage sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char getrusage(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char getrusage(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_getrusage) || defined (__stub___getrusage) choke me #else getrusage(); #endif ; return 0; } Pushing language C Popping language C sh: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Executing: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded output: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Pushing language C Popping language C in cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char getrusage(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char getrusage(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_getrusage) || defined (__stub___getrusage) choke me #else getrusage(); #endif ; return 0; } Defined "HAVE_GETRUSAGE" to "1" ================================================================================ TEST check from config.functions(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function times sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char times(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char times(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_times) || defined (__stub___times) choke me #else times(); #endif ; return 0; } Pushing language C Popping language C sh: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Executing: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded output: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Pushing language C Popping language C in cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char times(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char times(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_times) || defined (__stub___times) choke me #else times(); #endif ; return 0; } Defined "HAVE_TIMES" to "1" ================================================================================ TEST check from config.functions(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function _intel_fast_memcpy sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char _intel_fast_memcpy(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _intel_fast_memcpy(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub__intel_fast_memcpy) || defined (__stub____intel_fast_memcpy) choke me #else _intel_fast_memcpy(); #endif ; return 0; } Pushing language C Popping language C sh: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Executing: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o: In function `main': conftest.c:(.text.startup+0x7): undefined reference to `_intel_fast_memcpy' /usr/bin/ld: link errors found, deleting executable `/scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest' collect2: error: ld returned 1 exit status output: ret = 256 error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o: In function `main': conftest.c:(.text.startup+0x7): undefined reference to `_intel_fast_memcpy' /usr/bin/ld: link errors found, deleting executable `/scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest' collect2: error: ld returned 1 exit status } Pushing language C Popping language C in cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char _intel_fast_memcpy(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _intel_fast_memcpy(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub__intel_fast_memcpy) || defined (__stub____intel_fast_memcpy) choke me #else _intel_fast_memcpy(); #endif ; return 0; } ================================================================================ TEST check from config.functions(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function time sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char time(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char time(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_time) || defined (__stub___time) choke me #else time(); #endif ; return 0; } Pushing language C Popping language C sh: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Executing: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded output: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Pushing language C Popping language C in cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char time(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char time(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_time) || defined (__stub___time) choke me #else time(); #endif ; return 0; } Defined "HAVE_TIME" to "1" ================================================================================ TEST check from config.functions(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function sysctlbyname sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char sysctlbyname(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char sysctlbyname(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_sysctlbyname) || defined (__stub___sysctlbyname) choke me #else sysctlbyname(); #endif ; return 0; } Pushing language C Popping language C sh: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Executing: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o: In function `main': conftest.c:(.text.startup+0x7): undefined reference to `sysctlbyname' /usr/bin/ld: link errors found, deleting executable `/scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest' collect2: error: ld returned 1 exit status output: ret = 256 error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o: In function `main': conftest.c:(.text.startup+0x7): undefined reference to `sysctlbyname' /usr/bin/ld: link errors found, deleting executable `/scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest' collect2: error: ld returned 1 exit status } Pushing language C Popping language C in cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char sysctlbyname(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char sysctlbyname(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_sysctlbyname) || defined (__stub___sysctlbyname) choke me #else sysctlbyname(); #endif ; return 0; } ================================================================================ TEST check from config.functions(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/functions.py:29) TESTING: check from config.functions(config/BuildSystem/config/functions.py:29) Checks for the function "funcName", and if found defines HAVE_"funcName" Checking for function stricmp sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char stricmp(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char stricmp(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_stricmp) || defined (__stub___stricmp) choke me #else stricmp(); #endif ; return 0; } Pushing language C Popping language C sh: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Executing: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o: In function `main': conftest.c:(.text.startup+0x7): undefined reference to `stricmp' /usr/bin/ld: link errors found, deleting executable `/scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest' collect2: error: ld returned 1 exit status output: ret = 256 error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o: In function `main': conftest.c:(.text.startup+0x7): undefined reference to `stricmp' /usr/bin/ld: link errors found, deleting executable `/scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest' collect2: error: ld returned 1 exit status } Pushing language C Popping language C in cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char stricmp(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char stricmp(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_stricmp) || defined (__stub___stricmp) choke me #else stricmp(); #endif ; return 0; } ================================================================================ TEST configureMemorySize from PETSc.utilities.getResidentSetSize(/global/u2/m/madams/petsc_maint/config/PETSc/utilities/getResidentSetSize.py:31) TESTING: configureMemorySize from PETSc.utilities.getResidentSetSize(config/PETSc/utilities/getResidentSetSize.py:31) Try to determine how to measure the memory usage Defined "USE_PROC_FOR_SIZE" to "1" Using /proc for PetscMemoryGetCurrentUsage() ================================================================================ TEST configureFPTrap from PETSc.utilities.FPTrap(/global/u2/m/madams/petsc_maint/config/PETSc/utilities/FPTrap.py:27) TESTING: configureFPTrap from PETSc.utilities.FPTrap(config/PETSc/utilities/FPTrap.py:27) Checking the handling of floating point traps Checking for header: sigfpe.h sh: gcc -E -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c Executing: gcc -E -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c sh: # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" # 1 "" # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/confdefs.h" 1 # 2 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conffix.h" 1 # 3 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 Possible ERROR while running preprocessor: /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c:3:20: fatal error: sigfpe.h: No such file or directory #include ^ compilation terminated. ret = 256 error message = {/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c:3:20: fatal error: sigfpe.h: No such file or directory #include ^ compilation terminated. } Source: #include "confdefs.h" #include "conffix.h" #include Checking for header: fpxcp.h sh: gcc -E -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c Executing: gcc -E -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c sh: # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" # 1 "" # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/confdefs.h" 1 # 2 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conffix.h" 1 # 3 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 Possible ERROR while running preprocessor: /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c:3:19: fatal error: fpxcp.h: No such file or directory #include ^ compilation terminated. ret = 256 error message = {/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c:3:19: fatal error: fpxcp.h: No such file or directory #include ^ compilation terminated. } Source: #include "confdefs.h" #include "conffix.h" #include Checking for header: floatingpoint.h sh: gcc -E -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c Executing: gcc -E -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c sh: # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" # 1 "" # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/confdefs.h" 1 # 2 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conffix.h" 1 # 3 "/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c" 2 Possible ERROR while running preprocessor: /scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c:3:27: fatal error: floatingpoint.h: No such file or directory #include ^ compilation terminated. ret = 256 error message = {/scratch/scratchdirs/madams/petsc-i5209_/config.headers/conftest.c:3:27: fatal error: floatingpoint.h: No such file or directory #include ^ compilation terminated. } Source: #include "confdefs.h" #include "conffix.h" #include ================================================================================ TEST check_siginfo_t from config.types(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/types.py:46) TESTING: check_siginfo_t from config.types(config/BuildSystem/config/types.py:46) Checks if siginfo_t exists in signal.h. This check is for windows, and C89 check. Checking for type: siginfo_t All intermediate test results are stored in /scratch/scratchdirs/madams/petsc-i5209_/config.types sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.c: In function 'main': /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.c:13:11: warning: unused variable 'a' [-Wunused-variable] siginfo_t a;; ^ } Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #include #endif int main() { siginfo_t a;; return 0; } siginfo_t found Defined "HAVE_SIGINFO_T" to "1" ================================================================================ TEST check__int64 from config.types(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/types.py:52) TESTING: check__int64 from config.types(config/BuildSystem/config/types.py:52) Checks if __int64 exists. This is primarily for windows. Checking for type: __int64 sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.c sh: Possible ERROR while running compiler: ret = 256 error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.c: In function 'main': /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.c:13:1: error: unknown type name '__int64' __int64 a;; ^ /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.c:13:9: warning: unused variable 'a' [-Wunused-variable] __int64 a;; ^ } Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #endif int main() { __int64 a;; return 0; } __int64 found ================================================================================ TEST checkSizeTypes from config.types(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/types.py:58) TESTING: checkSizeTypes from config.types(config/BuildSystem/config/types.py:58) Checks for types associated with sizes, such as size_t. Checking for type: size_t sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.c: In function 'main': /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.c:13:8: warning: unused variable 'a' [-Wunused-variable] size_t a;; ^ } Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #endif int main() { size_t a;; return 0; } size_t found ================================================================================ TEST checkFileTypes from config.types(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/types.py:68) TESTING: checkFileTypes from config.types(config/BuildSystem/config/types.py:68) Checks for types associated with files, such as mode_t, off_t, etc. Checking for type: mode_t sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.c: In function 'main': /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.c:13:8: warning: unused variable 'a' [-Wunused-variable] mode_t a;; ^ } Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #endif int main() { mode_t a;; return 0; } mode_t found Checking for type: off_t sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.c: In function 'main': /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.c:13:7: warning: unused variable 'a' [-Wunused-variable] off_t a;; ^ } Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #endif int main() { off_t a;; return 0; } off_t found ================================================================================ TEST checkIntegerTypes from config.types(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/types.py:63) TESTING: checkIntegerTypes from config.types(config/BuildSystem/config/types.py:63) Checks for types associated with integers, such as int32_t. Checking for type: int32_t sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.c: In function 'main': /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.c:13:9: warning: unused variable 'a' [-Wunused-variable] int32_t a;; ^ } Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #endif int main() { int32_t a;; return 0; } int32_t found ================================================================================ TEST checkPID from config.types(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/types.py:74) TESTING: checkPID from config.types(config/BuildSystem/config/types.py:74) Checks for pid_t, and defines it if necessary Checking for type: pid_t sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.c: In function 'main': /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.c:13:7: warning: unused variable 'a' [-Wunused-variable] pid_t a;; ^ } Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #endif int main() { pid_t a;; return 0; } pid_t found ================================================================================ TEST checkUID from config.types(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/types.py:78) TESTING: checkUID from config.types(config/BuildSystem/config/types.py:78) Checks for uid_t and gid_t, and defines them if necessary sh: gcc -E -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.c Executing: gcc -E -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.c sh: # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.c" # 1 "" # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.c" # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.types/confdefs.h" 1 # 2 "/scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.c" 2 # 1 "/scratch/scratchdirs/madams/petsc-i5209_/config.types/conffix.h" 1 # 3 "/scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.c" 2 # 1 "/usr/include/sys/types.h" 1 3 4 # 27 "/usr/include/sys/types.h" 3 4 # 1 "/usr/include/features.h" 1 3 4 # 347 "/usr/include/features.h" 3 4 # 1 "/usr/include/sys/cdefs.h" 1 3 4 # 353 "/usr/include/sys/cdefs.h" 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 354 "/usr/include/sys/cdefs.h" 2 3 4 # 348 "/usr/include/features.h" 2 3 4 # 371 "/usr/include/features.h" 3 4 # 1 "/usr/include/gnu/stubs.h" 1 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 5 "/usr/include/gnu/stubs.h" 2 3 4 # 1 "/usr/include/gnu/stubs-64.h" 1 3 4 # 10 "/usr/include/gnu/stubs.h" 2 3 4 # 372 "/usr/include/features.h" 2 3 4 # 28 "/usr/include/sys/types.h" 2 3 4 # 1 "/usr/include/bits/types.h" 1 3 4 # 28 "/usr/include/bits/types.h" 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 29 "/usr/include/bits/types.h" 2 3 4 typedef unsigned char __u_char; typedef unsigned short int __u_short; typedef unsigned int __u_int; typedef unsigned long int __u_long; typedef signed char __int8_t; typedef unsigned char __uint8_t; typedef signed short int __int16_t; typedef unsigned short int __uint16_t; typedef signed int __int32_t; typedef unsigned int __uint32_t; typedef signed long int __int64_t; typedef unsigned long int __uint64_t; typedef long int __quad_t; typedef unsigned long int __u_quad_t; # 131 "/usr/include/bits/types.h" 3 4 # 1 "/usr/include/bits/typesizes.h" 1 3 4 # 132 "/usr/include/bits/types.h" 2 3 4 typedef unsigned long int __dev_t; typedef unsigned int __uid_t; typedef unsigned int __gid_t; typedef unsigned long int __ino_t; typedef unsigned long int __ino64_t; typedef unsigned int __mode_t; typedef unsigned long int __nlink_t; typedef long int __off_t; typedef long int __off64_t; typedef int __pid_t; typedef struct { int __val[2]; } __fsid_t; typedef long int __clock_t; typedef unsigned long int __rlim_t; typedef unsigned long int __rlim64_t; typedef unsigned int __id_t; typedef long int __time_t; typedef unsigned int __useconds_t; typedef long int __suseconds_t; typedef int __daddr_t; typedef long int __swblk_t; typedef int __key_t; typedef int __clockid_t; typedef void * __timer_t; typedef long int __blksize_t; typedef long int __blkcnt_t; typedef long int __blkcnt64_t; typedef unsigned long int __fsblkcnt_t; typedef unsigned long int __fsblkcnt64_t; typedef unsigned long int __fsfilcnt_t; typedef unsigned long int __fsfilcnt64_t; typedef long int __ssize_t; typedef __off64_t __loff_t; typedef __quad_t *__qaddr_t; typedef char *__caddr_t; typedef long int __intptr_t; typedef unsigned int __socklen_t; # 32 "/usr/include/sys/types.h" 2 3 4 typedef __u_char u_char; typedef __u_short u_short; typedef __u_int u_int; typedef __u_long u_long; typedef __quad_t quad_t; typedef __u_quad_t u_quad_t; typedef __fsid_t fsid_t; typedef __loff_t loff_t; typedef __ino_t ino_t; # 62 "/usr/include/sys/types.h" 3 4 typedef __dev_t dev_t; typedef __gid_t gid_t; typedef __mode_t mode_t; typedef __nlink_t nlink_t; typedef __uid_t uid_t; typedef __off_t off_t; # 100 "/usr/include/sys/types.h" 3 4 typedef __pid_t pid_t; typedef __id_t id_t; typedef __ssize_t ssize_t; typedef __daddr_t daddr_t; typedef __caddr_t caddr_t; typedef __key_t key_t; # 133 "/usr/include/sys/types.h" 3 4 # 1 "/usr/include/time.h" 1 3 4 # 74 "/usr/include/time.h" 3 4 typedef __time_t time_t; # 92 "/usr/include/time.h" 3 4 typedef __clockid_t clockid_t; # 104 "/usr/include/time.h" 3 4 typedef __timer_t timer_t; # 134 "/usr/include/sys/types.h" 2 3 4 # 147 "/usr/include/sys/types.h" 3 4 # 1 "/opt/gcc/4.8.1/snos/lib/gcc/x86_64-suse-linux/4.8.1/include/stddef.h" 1 3 4 # 212 "/opt/gcc/4.8.1/snos/lib/gcc/x86_64-suse-linux/4.8.1/include/stddef.h" 3 4 typedef long unsigned int size_t; # 148 "/usr/include/sys/types.h" 2 3 4 typedef unsigned long int ulong; typedef unsigned short int ushort; typedef unsigned int uint; # 195 "/usr/include/sys/types.h" 3 4 typedef int int8_t __attribute__ ((__mode__ (__QI__))); typedef int int16_t __attribute__ ((__mode__ (__HI__))); typedef int int32_t __attribute__ ((__mode__ (__SI__))); typedef int int64_t __attribute__ ((__mode__ (__DI__))); typedef unsigned int u_int8_t __attribute__ ((__mode__ (__QI__))); typedef unsigned int u_int16_t __attribute__ ((__mode__ (__HI__))); typedef unsigned int u_int32_t __attribute__ ((__mode__ (__SI__))); typedef unsigned int u_int64_t __attribute__ ((__mode__ (__DI__))); typedef int register_t __attribute__ ((__mode__ (__word__))); # 217 "/usr/include/sys/types.h" 3 4 # 1 "/usr/include/endian.h" 1 3 4 # 37 "/usr/include/endian.h" 3 4 # 1 "/usr/include/bits/endian.h" 1 3 4 # 38 "/usr/include/endian.h" 2 3 4 # 61 "/usr/include/endian.h" 3 4 # 1 "/usr/include/bits/byteswap.h" 1 3 4 # 28 "/usr/include/bits/byteswap.h" 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 29 "/usr/include/bits/byteswap.h" 2 3 4 # 62 "/usr/include/endian.h" 2 3 4 # 218 "/usr/include/sys/types.h" 2 3 4 # 1 "/usr/include/sys/select.h" 1 3 4 # 31 "/usr/include/sys/select.h" 3 4 # 1 "/usr/include/bits/select.h" 1 3 4 # 23 "/usr/include/bits/select.h" 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 24 "/usr/include/bits/select.h" 2 3 4 # 32 "/usr/include/sys/select.h" 2 3 4 # 1 "/usr/include/bits/sigset.h" 1 3 4 # 24 "/usr/include/bits/sigset.h" 3 4 typedef int __sig_atomic_t; typedef struct { unsigned long int __val[(1024 / (8 * sizeof (unsigned long int)))]; } __sigset_t; # 35 "/usr/include/sys/select.h" 2 3 4 typedef __sigset_t sigset_t; # 1 "/usr/include/time.h" 1 3 4 # 120 "/usr/include/time.h" 3 4 struct timespec { __time_t tv_sec; long int tv_nsec; }; # 45 "/usr/include/sys/select.h" 2 3 4 # 1 "/usr/include/bits/time.h" 1 3 4 # 69 "/usr/include/bits/time.h" 3 4 struct timeval { __time_t tv_sec; __suseconds_t tv_usec; }; # 47 "/usr/include/sys/select.h" 2 3 4 typedef __suseconds_t suseconds_t; typedef long int __fd_mask; # 67 "/usr/include/sys/select.h" 3 4 typedef struct { __fd_mask __fds_bits[1024 / (8 * (int) sizeof (__fd_mask))]; } fd_set; typedef __fd_mask fd_mask; # 99 "/usr/include/sys/select.h" 3 4 # 109 "/usr/include/sys/select.h" 3 4 extern int select (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, struct timeval *__restrict __timeout); # 121 "/usr/include/sys/select.h" 3 4 extern int pselect (int __nfds, fd_set *__restrict __readfds, fd_set *__restrict __writefds, fd_set *__restrict __exceptfds, const struct timespec *__restrict __timeout, const __sigset_t *__restrict __sigmask); # 221 "/usr/include/sys/types.h" 2 3 4 # 1 "/usr/include/sys/sysmacros.h" 1 3 4 # 30 "/usr/include/sys/sysmacros.h" 3 4 __extension__ extern unsigned int gnu_dev_major (unsigned long long int __dev) __attribute__ ((__nothrow__)); __extension__ extern unsigned int gnu_dev_minor (unsigned long long int __dev) __attribute__ ((__nothrow__)); __extension__ extern unsigned long long int gnu_dev_makedev (unsigned int __major, unsigned int __minor) __attribute__ ((__nothrow__)); # 224 "/usr/include/sys/types.h" 2 3 4 # 235 "/usr/include/sys/types.h" 3 4 typedef __blkcnt_t blkcnt_t; typedef __fsblkcnt_t fsblkcnt_t; typedef __fsfilcnt_t fsfilcnt_t; # 270 "/usr/include/sys/types.h" 3 4 # 1 "/usr/include/bits/pthreadtypes.h" 1 3 4 # 23 "/usr/include/bits/pthreadtypes.h" 3 4 # 1 "/usr/include/bits/wordsize.h" 1 3 4 # 24 "/usr/include/bits/pthreadtypes.h" 2 3 4 # 50 "/usr/include/bits/pthreadtypes.h" 3 4 typedef unsigned long int pthread_t; typedef union { char __size[56]; long int __align; } pthread_attr_t; typedef struct __pthread_internal_list { struct __pthread_internal_list *__prev; struct __pthread_internal_list *__next; } __pthread_list_t; # 76 "/usr/include/bits/pthreadtypes.h" 3 4 typedef union { struct __pthread_mutex_s { int __lock; unsigned int __count; int __owner; unsigned int __nusers; int __kind; int __spins; __pthread_list_t __list; # 101 "/usr/include/bits/pthreadtypes.h" 3 4 } __data; char __size[40]; long int __align; } pthread_mutex_t; typedef union { char __size[4]; int __align; } pthread_mutexattr_t; typedef union { struct { int __lock; unsigned int __futex; __extension__ unsigned long long int __total_seq; __extension__ unsigned long long int __wakeup_seq; __extension__ unsigned long long int __woken_seq; void *__mutex; unsigned int __nwaiters; unsigned int __broadcast_seq; } __data; char __size[48]; __extension__ long long int __align; } pthread_cond_t; typedef union { char __size[4]; int __align; } pthread_condattr_t; typedef unsigned int pthread_key_t; typedef int pthread_once_t; typedef union { struct { int __lock; unsigned int __nr_readers; unsigned int __readers_wakeup; unsigned int __writer_wakeup; unsigned int __nr_readers_queued; unsigned int __nr_writers_queued; int __writer; int __shared; unsigned long int __pad1; unsigned long int __pad2; unsigned int __flags; } __data; # 187 "/usr/include/bits/pthreadtypes.h" 3 4 char __size[56]; long int __align; } pthread_rwlock_t; typedef union { char __size[8]; long int __align; } pthread_rwlockattr_t; typedef volatile int pthread_spinlock_t; typedef union { char __size[32]; long int __align; } pthread_barrier_t; typedef union { char __size[4]; int __align; } pthread_barrierattr_t; # 271 "/usr/include/sys/types.h" 2 3 4 # 3 "/scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.c" 2 ================================================================================ TEST checkSignal from config.types(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/types.py:85) TESTING: checkSignal from config.types(config/BuildSystem/config/types.py:85) Checks the return type of signal() and defines RETSIGTYPE to that type name sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" #include #include #ifdef signal #undef signal #endif #ifdef __cplusplus extern "C" void (*signal (int, void(*)(int)))(int); #else void (*signal())(); #endif int main() { ; return 0; } Defined "RETSIGTYPE" to "void" ================================================================================ TEST checkC99Complex from config.types(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/types.py:106) TESTING: checkC99Complex from config.types(config/BuildSystem/config/types.py:106) Check for complex numbers in in C99 std sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.c: In function 'main': /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.c:6:16: warning: variable 'x' set but not used [-Wunused-but-set-variable] double complex x; ^ } Source: #include "confdefs.h" #include "conffix.h" #include int main() { double complex x; x = I; ; return 0; } Pushing language C Popping language C sh: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.o -ldl Executing: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.o -ldl sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded output: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Pushing language C Popping language C in cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.o -ldl Source: #include "confdefs.h" #include "conffix.h" #include int main() { double complex x; x = I; ; return 0; } Defined "HAVE_C99_COMPLEX" to "1" ================================================================================ TEST checkCxxComplex from config.types(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/types.py:115) TESTING: checkCxxComplex from config.types(config/BuildSystem/config/types.py:115) Check for complex numbers in namespace std Pushing language Cxx sh: CC -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.cc Executing: CC -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.cc sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" #include int main() { std::complex x; ; return 0; } Pushing language CXX Popping language CXX sh: CC -o /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.o -ldl Executing: CC -o /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.o -ldl sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded output: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Pushing language CXX Popping language CXX in CC -o /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.o -ldl Source: #include "confdefs.h" #include "conffix.h" #include int main() { std::complex x; ; return 0; } Defined "HAVE_CXX_COMPLEX" to "1" Popping language Cxx ================================================================================ TEST checkFortranKind from config.types(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/types.py:136) TESTING: checkFortranKind from config.types(config/BuildSystem/config/types.py:136) Checks whether selected_int_kind etc work USE_FORTRANKIND Pushing language FC sh: ftn -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -Wall -Wno-unused-variable -Wno-unused-dummy-argument -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.F Executing: ftn -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -Wall -Wno-unused-variable -Wno-unused-dummy-argument -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.F sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: program main integer(kind=selected_int_kind(10)) i real(kind=selected_real_kind(10)) d end Defined "USE_FORTRANKIND" to "1" Popping language FC ================================================================================ TEST checkFortranDReal from config.types(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/types.py:148) TESTING: checkFortranDReal from config.types(config/BuildSystem/config/types.py:148) Checks whether dreal is provided in Fortran, and if not defines MISSING_DREAL Pushing language FC sh: ftn -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -Wall -Wno-unused-variable -Wno-unused-dummy-argument -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.F Executing: ftn -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -Wall -Wno-unused-variable -Wno-unused-dummy-argument -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.F sh: Possible ERROR while running compiler: ret = 256 error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.F:3.16: d = dreal(3.0) 1 Error: Type of argument 'a' in call to 'dreal' at (1) should be COMPLEX(8), not REAL(4) } Source: program main double precision d d = dreal(3.0) end Compile failed inside link Defined "MISSING_DREAL" to "1" Popping language FC ================================================================================ TEST checkConst from config.types(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/types.py:156) TESTING: checkConst from config.types(config/BuildSystem/config/types.py:156) Checks for working const, and if not found defines it to empty string sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.c: In function 'main': /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.c:30:9: warning: 't' is used uninitialized in this function [-Wuninitialized] *t++ = 0; ^ /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.c:46:25: warning: 'b' is used uninitialized in this function [-Wuninitialized] struct s *b; b->j = 5; ^ } Source: #include "confdefs.h" #include "conffix.h" int main() { /* Ultrix mips cc rejects this. */ typedef int charset[2]; const charset x; /* SunOS 4.1.1 cc rejects this. */ char const *const *ccp; char **p; /* NEC SVR4.0.2 mips cc rejects this. */ struct point {int x, y;}; static struct point const zero = {0,0}; /* AIX XL C 1.02.0.0 rejects this. It does not let you subtract one const X* pointer from another in an arm of an if-expression whose if-part is not a constant expression */ const char *g = "string"; ccp = &g + (g ? g-g : 0); /* HPUX 7.0 cc rejects these. */ ++ccp; p = (char**) ccp; ccp = (char const *const *) p; /* This section avoids unused variable warnings */ if (zero.x); if (x[0]); { /* SCO 3.2v4 cc rejects this. */ char *t; char const *s = 0 ? (char *) 0 : (char const *) 0; *t++ = 0; if (*s); } { /* Someone thinks the Sun supposedly-ANSI compiler will reject this. */ int x[] = {25, 17}; const int *foo = &x[0]; ++foo; } { /* Sun SC1.0 ANSI compiler rejects this -- but not the above. */ typedef const int *iptr; iptr p = 0; ++p; } { /* AIX XL C 1.02.0.0 rejects this saying "k.c", line 2.27: 1506-025 (S) Operand must be a modifiable lvalue. */ struct s { int j; const int *ap[3]; }; struct s *b; b->j = 5; } { /* ULTRIX-32 V3.1 (Rev 9) vcc rejects this */ const int foo = 10; /* Get rid of unused variable warning */ if (foo); } ; return 0; } ================================================================================ TEST checkEndian from config.types(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/types.py:212) TESTING: checkEndian from config.types(config/BuildSystem/config/types.py:212) If the machine is big endian, defines WORDS_BIGENDIAN sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" #include #ifdef HAVE_SYS_PARAM_H #include #endif int main() { #if !BYTE_ORDER || !BIG_ENDIAN || !LITTLE_ENDIAN bogus endian macros #endif ; return 0; } sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.c sh: Possible ERROR while running compiler: ret = 256 error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.c: In function 'main': /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.c:11:3: error: unknown type name 'not' not big endian ^ /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.c:11:11: error: expected '=', ',', ';', 'asm' or '__attribute__' before 'endian' not big endian ^ } Source: #include "confdefs.h" #include "conffix.h" #include #ifdef HAVE_SYS_PARAM_H #include #endif int main() { #if BYTE_ORDER != BIG_ENDIAN not big endian #endif ; return 0; } ================================================================================ TEST checkSizeof from config.types(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/types.py:265) TESTING: checkSizeof from config.types(config/BuildSystem/config/types.py:265) Determines the size of type "typeName", and defines SIZEOF_"typeName" to be the size Checking for size of type: char Pushing language C sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #include #endif int main() { FILE *f = fopen("conftestval", "w"); if (!f) exit(1); fprintf(f, "%lu\n", (unsigned long)sizeof(char)); ; return 0; } Pushing language C Popping language C sh: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.o -ldl Executing: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.o -ldl sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded output: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Pushing language C Popping language C in cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.o -ldl Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #include #endif int main() { FILE *f = fopen("conftestval", "w"); if (!f) exit(1); fprintf(f, "%lu\n", (unsigned long)sizeof(char)); ; return 0; } Executing: /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest sh: /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest Executing: /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest sh: Popping language C Defined "SIZEOF_CHAR" to "1" ================================================================================ TEST checkSizeof from config.types(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/types.py:265) TESTING: checkSizeof from config.types(config/BuildSystem/config/types.py:265) Determines the size of type "typeName", and defines SIZEOF_"typeName" to be the size Checking for size of type: void * Pushing language C sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #include #endif int main() { FILE *f = fopen("conftestval", "w"); if (!f) exit(1); fprintf(f, "%lu\n", (unsigned long)sizeof(void *)); ; return 0; } Pushing language C Popping language C sh: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.o -ldl Executing: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.o -ldl sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded output: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Pushing language C Popping language C in cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.o -ldl Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #include #endif int main() { FILE *f = fopen("conftestval", "w"); if (!f) exit(1); fprintf(f, "%lu\n", (unsigned long)sizeof(void *)); ; return 0; } Executing: /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest sh: /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest Executing: /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest sh: Popping language C Defined "SIZEOF_VOID_P" to "8" ================================================================================ TEST checkSizeof from config.types(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/types.py:265) TESTING: checkSizeof from config.types(config/BuildSystem/config/types.py:265) Determines the size of type "typeName", and defines SIZEOF_"typeName" to be the size Checking for size of type: short Pushing language C sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #include #endif int main() { FILE *f = fopen("conftestval", "w"); if (!f) exit(1); fprintf(f, "%lu\n", (unsigned long)sizeof(short)); ; return 0; } Pushing language C Popping language C sh: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.o -ldl Executing: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.o -ldl sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded output: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Pushing language C Popping language C in cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.o -ldl Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #include #endif int main() { FILE *f = fopen("conftestval", "w"); if (!f) exit(1); fprintf(f, "%lu\n", (unsigned long)sizeof(short)); ; return 0; } Executing: /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest sh: /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest Executing: /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest sh: Popping language C Defined "SIZEOF_SHORT" to "2" ================================================================================ TEST checkSizeof from config.types(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/types.py:265) TESTING: checkSizeof from config.types(config/BuildSystem/config/types.py:265) Determines the size of type "typeName", and defines SIZEOF_"typeName" to be the size Checking for size of type: int Pushing language C sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #include #endif int main() { FILE *f = fopen("conftestval", "w"); if (!f) exit(1); fprintf(f, "%lu\n", (unsigned long)sizeof(int)); ; return 0; } Pushing language C Popping language C sh: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.o -ldl Executing: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.o -ldl sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded output: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Pushing language C Popping language C in cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.o -ldl Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #include #endif int main() { FILE *f = fopen("conftestval", "w"); if (!f) exit(1); fprintf(f, "%lu\n", (unsigned long)sizeof(int)); ; return 0; } Executing: /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest sh: /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest Executing: /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest sh: Popping language C Defined "SIZEOF_INT" to "4" ================================================================================ TEST checkSizeof from config.types(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/types.py:265) TESTING: checkSizeof from config.types(config/BuildSystem/config/types.py:265) Determines the size of type "typeName", and defines SIZEOF_"typeName" to be the size Checking for size of type: long Pushing language C sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #include #endif int main() { FILE *f = fopen("conftestval", "w"); if (!f) exit(1); fprintf(f, "%lu\n", (unsigned long)sizeof(long)); ; return 0; } Pushing language C Popping language C sh: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.o -ldl Executing: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.o -ldl sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded output: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Pushing language C Popping language C in cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.o -ldl Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #include #endif int main() { FILE *f = fopen("conftestval", "w"); if (!f) exit(1); fprintf(f, "%lu\n", (unsigned long)sizeof(long)); ; return 0; } Executing: /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest sh: /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest Executing: /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest sh: Popping language C Defined "SIZEOF_LONG" to "8" ================================================================================ TEST checkSizeof from config.types(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/types.py:265) TESTING: checkSizeof from config.types(config/BuildSystem/config/types.py:265) Determines the size of type "typeName", and defines SIZEOF_"typeName" to be the size Checking for size of type: long long Pushing language C sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #include #endif int main() { FILE *f = fopen("conftestval", "w"); if (!f) exit(1); fprintf(f, "%lu\n", (unsigned long)sizeof(long long)); ; return 0; } Pushing language C Popping language C sh: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.o -ldl Executing: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.o -ldl sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded output: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Pushing language C Popping language C in cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.o -ldl Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #include #endif int main() { FILE *f = fopen("conftestval", "w"); if (!f) exit(1); fprintf(f, "%lu\n", (unsigned long)sizeof(long long)); ; return 0; } Executing: /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest sh: /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest Executing: /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest sh: Popping language C Defined "SIZEOF_LONG_LONG" to "8" ================================================================================ TEST checkSizeof from config.types(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/types.py:265) TESTING: checkSizeof from config.types(config/BuildSystem/config/types.py:265) Determines the size of type "typeName", and defines SIZEOF_"typeName" to be the size Checking for size of type: float Pushing language C sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #include #endif int main() { FILE *f = fopen("conftestval", "w"); if (!f) exit(1); fprintf(f, "%lu\n", (unsigned long)sizeof(float)); ; return 0; } Pushing language C Popping language C sh: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.o -ldl Executing: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.o -ldl sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded output: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Pushing language C Popping language C in cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.o -ldl Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #include #endif int main() { FILE *f = fopen("conftestval", "w"); if (!f) exit(1); fprintf(f, "%lu\n", (unsigned long)sizeof(float)); ; return 0; } Executing: /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest sh: /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest Executing: /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest sh: Popping language C Defined "SIZEOF_FLOAT" to "4" ================================================================================ TEST checkSizeof from config.types(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/types.py:265) TESTING: checkSizeof from config.types(config/BuildSystem/config/types.py:265) Determines the size of type "typeName", and defines SIZEOF_"typeName" to be the size Checking for size of type: double Pushing language C sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #include #endif int main() { FILE *f = fopen("conftestval", "w"); if (!f) exit(1); fprintf(f, "%lu\n", (unsigned long)sizeof(double)); ; return 0; } Pushing language C Popping language C sh: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.o -ldl Executing: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.o -ldl sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded output: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Pushing language C Popping language C in cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.o -ldl Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #include #endif int main() { FILE *f = fopen("conftestval", "w"); if (!f) exit(1); fprintf(f, "%lu\n", (unsigned long)sizeof(double)); ; return 0; } Executing: /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest sh: /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest Executing: /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest sh: Popping language C Defined "SIZEOF_DOUBLE" to "8" ================================================================================ TEST checkSizeof from config.types(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/types.py:265) TESTING: checkSizeof from config.types(config/BuildSystem/config/types.py:265) Determines the size of type "typeName", and defines SIZEOF_"typeName" to be the size Checking for size of type: size_t Pushing language C sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #include #endif int main() { FILE *f = fopen("conftestval", "w"); if (!f) exit(1); fprintf(f, "%lu\n", (unsigned long)sizeof(size_t)); ; return 0; } Pushing language C Popping language C sh: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.o -ldl Executing: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.o -ldl sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded output: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Pushing language C Popping language C in cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.o -ldl Source: #include "confdefs.h" #include "conffix.h" #include #if STDC_HEADERS #include #include #include #endif int main() { FILE *f = fopen("conftestval", "w"); if (!f) exit(1); fprintf(f, "%lu\n", (unsigned long)sizeof(size_t)); ; return 0; } Executing: /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest sh: /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest Executing: /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest sh: Popping language C Defined "SIZEOF_SIZE_T" to "8" ================================================================================ TEST checkBitsPerByte from config.types(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/types.py:316) TESTING: checkBitsPerByte from config.types(config/BuildSystem/config/types.py:316) Determine the nubmer of bits per byte and define BITS_PER_BYTE sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" #if STDC_HEADERS #include #include #endif int main() { FILE *f = fopen("conftestval", "w"); char val[2]; int i = 0; if (!f) exit(1); val[0]='\1'; val[1]='\0'; while(val[0]) {val[0] <<= 1; i++;} fprintf(f, "%d\n", i); ; return 0; } Pushing language C Popping language C sh: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.o -ldl Executing: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.o -ldl sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded output: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Pushing language C Popping language C in cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest.o -ldl Source: #include "confdefs.h" #include "conffix.h" #if STDC_HEADERS #include #include #endif int main() { FILE *f = fopen("conftestval", "w"); char val[2]; int i = 0; if (!f) exit(1); val[0]='\1'; val[1]='\0'; while(val[0]) {val[0] <<= 1; i++;} fprintf(f, "%d\n", i); ; return 0; } Executing: /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest sh: /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest Executing: /scratch/scratchdirs/madams/petsc-i5209_/config.types/conftest sh: Defined "BITS_PER_BYTE" to "8" ================================================================================ TEST checkVisibility from config.types(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/types.py:362) TESTING: checkVisibility from config.types(config/BuildSystem/config/types.py:362) ================================================================================ TEST configureMemAlign from PETSc.utilities.memAlign(/global/u2/m/madams/petsc_maint/config/PETSc/utilities/memAlign.py:30) TESTING: configureMemAlign from PETSc.utilities.memAlign(config/PETSc/utilities/memAlign.py:30) Choose alignment Defined "MEMALIGN" to "16" Memory alignment is 16 ================================================================================ TEST configureCHUD from PETSc.utilities.CHUD(/global/u2/m/madams/petsc_maint/config/PETSc/utilities/CHUD.py:25) TESTING: configureCHUD from PETSc.utilities.CHUD(config/PETSc/utilities/CHUD.py:25) Determines if the Apple CHUD hardware monitoring utilities are available sh: uname -s Executing: uname -s sh: Linux ================================================================================ TEST check from config.libraries(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/libraries.py:145) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:145) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for function socket in library ['socket', 'nsl'] [] Pushing language C sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char socket(); int main() { socket() ; return 0; } Pushing language C Popping language C sh: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o -lsocket -lnsl -ldl Executing: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o -lsocket -lnsl -ldl sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded /usr/bin/ld: cannot find -lsocket collect2: error: ld returned 1 exit status output: ret = 256 error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded /usr/bin/ld: cannot find -lsocket collect2: error: ld returned 1 exit status } Pushing language C Popping language C in cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o -lsocket -lnsl -ldl Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char socket(); int main() { socket() ; return 0; } Popping language C ================================================================================ TEST check from config.libraries(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/libraries.py:145) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:145) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for function handle_sigfpes in library ['fpe'] [] Pushing language C sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char handle_sigfpes(); int main() { handle_sigfpes() ; return 0; } Pushing language C Popping language C sh: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o -lfpe -ldl Executing: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o -lfpe -ldl sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded /usr/bin/ld: cannot find -lfpe collect2: error: ld returned 1 exit status output: ret = 256 error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded /usr/bin/ld: cannot find -lfpe collect2: error: ld returned 1 exit status } Pushing language C Popping language C in cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o -lfpe -ldl Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char handle_sigfpes(); int main() { handle_sigfpes() ; return 0; } Popping language C ================================================================================ TEST check from config.libraries(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/libraries.py:145) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:145) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for function socket in library ['socket', 'nsl'] [] Pushing language C sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char socket(); int main() { socket() ; return 0; } Pushing language C Popping language C sh: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o -lsocket -lnsl -ldl Executing: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o -lsocket -lnsl -ldl sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded /usr/bin/ld: cannot find -lsocket collect2: error: ld returned 1 exit status output: ret = 256 error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded /usr/bin/ld: cannot find -lsocket collect2: error: ld returned 1 exit status } Pushing language C Popping language C in cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o -lsocket -lnsl -ldl Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char socket(); int main() { socket() ; return 0; } Popping language C ================================================================================ TEST check from config.libraries(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/libraries.py:145) TESTING: check from config.libraries(config/BuildSystem/config/libraries.py:145) Checks that the library "libName" contains "funcs", and if it does defines HAVE_LIB"libName" - libDir may be a list of directories - libName may be a list of library names Checking for function handle_sigfpes in library ['fpe'] [] Pushing language C sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char handle_sigfpes(); int main() { handle_sigfpes() ; return 0; } Pushing language C Popping language C sh: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o -lfpe -ldl Executing: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o -lfpe -ldl sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded /usr/bin/ld: cannot find -lfpe collect2: error: ld returned 1 exit status output: ret = 256 error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded /usr/bin/ld: cannot find -lfpe collect2: error: ld returned 1 exit status } Pushing language C Popping language C in cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o -lfpe -ldl Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char handle_sigfpes(); int main() { handle_sigfpes() ; return 0; } Popping language C ================================================================================ TEST checkMath from config.libraries(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/libraries.py:224) TESTING: checkMath from config.libraries(config/BuildSystem/config/libraries.py:224) Check for sin() in libm, the math library Checking for function sin in library [''] [] Pushing language C sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.c: In function 'main': /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.c:7:14: warning: variable 'y' set but not used [-Wunused-but-set-variable] double x = 0,y; y = sin(x); ^ } Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ double sin(double); int main() { double x = 0,y; y = sin(x); ; return 0; } Pushing language C Popping language C sh: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o -ldl Executing: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o -ldl sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded output: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Pushing language C Popping language C in cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o -ldl Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ double sin(double); int main() { double x = 0,y; y = sin(x); ; return 0; } Popping language C Checking for function floor in library [''] [] Pushing language C sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.c: In function 'main': /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.c:7:14: warning: variable 'y' set but not used [-Wunused-but-set-variable] double x = 0,y; y = floor(x); ^ } Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ double floor(double); int main() { double x = 0,y; y = floor(x); ; return 0; } Pushing language C Popping language C sh: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o -ldl Executing: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o -ldl sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded output: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Pushing language C Popping language C in cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o -ldl Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ double floor(double); int main() { double x = 0,y; y = floor(x); ; return 0; } Popping language C Checking for function log10 in library [''] [] Pushing language C sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.c: In function 'main': /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.c:7:14: warning: variable 'y' set but not used [-Wunused-but-set-variable] double x = 0,y; y = log10(x); ^ } Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ double log10(double); int main() { double x = 0,y; y = log10(x); ; return 0; } Pushing language C Popping language C sh: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o -ldl Executing: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o -ldl sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded output: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Pushing language C Popping language C in cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o -ldl Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ double log10(double); int main() { double x = 0,y; y = log10(x); ; return 0; } Popping language C Checking for function pow in library [''] [] Pushing language C sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.c: In function 'main': /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.c:7:14: warning: variable 'y' set but not used [-Wunused-but-set-variable] double x = 0,y ; y = pow(x, x); ^ } Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ double pow(double, double); int main() { double x = 0,y ; y = pow(x, x); ; return 0; } Pushing language C Popping language C sh: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o -ldl Executing: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o -ldl sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded output: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Pushing language C Popping language C in cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o -ldl Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ double pow(double, double); int main() { double x = 0,y ; y = pow(x, x); ; return 0; } Popping language C Math functions are linked in by default ================================================================================ TEST checkMathErf from config.libraries(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/libraries.py:240) TESTING: checkMathErf from config.libraries(config/BuildSystem/config/libraries.py:240) Check for erf() in libm, the math library Checking for function erf in library [] [] Pushing language C sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.c: In function 'main': /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.c:7:14: warning: variable 'y' set but not used [-Wunused-but-set-variable] double x = 0,y; y = erf(x); ^ } Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ double erf(double); int main() { double x = 0,y; y = erf(x); ; return 0; } Pushing language C Popping language C sh: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o -ldl Executing: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o -ldl sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded output: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Pushing language C Popping language C in cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o -ldl Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ double erf(double); int main() { double x = 0,y; y = erf(x); ; return 0; } Popping language C erf() found Defined "HAVE_ERF" to "1" ================================================================================ TEST checkMathTgamma from config.libraries(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/libraries.py:249) TESTING: checkMathTgamma from config.libraries(config/BuildSystem/config/libraries.py:249) Check for tgama() in libm, the math library Checking for function tgamma in library [] [] Pushing language C sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.c: In function 'main': /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.c:7:14: warning: variable 'y' set but not used [-Wunused-but-set-variable] double x = 0,y; y = tgamma(x); ^ } Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ double tgamma(double); int main() { double x = 0,y; y = tgamma(x); ; return 0; } Pushing language C Popping language C sh: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o -ldl Executing: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o -ldl sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded output: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Pushing language C Popping language C in cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o -ldl Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ double tgamma(double); int main() { double x = 0,y; y = tgamma(x); ; return 0; } Popping language C tgamma() found Defined "HAVE_TGAMMA" to "1" ================================================================================ TEST checkMathFenv from config.libraries(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/libraries.py:258) TESTING: checkMathFenv from config.libraries(config/BuildSystem/config/libraries.py:258) Checks if can be used with FE_DFL_ENV Checking for function fesetenv in library [] [] Pushing language C sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include int main() { fesetenv(FE_DFL_ENV);; return 0; } Pushing language C Popping language C sh: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o -ldl Executing: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o -ldl sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded output: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Pushing language C Popping language C in cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o -ldl Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include int main() { fesetenv(FE_DFL_ENV);; return 0; } Popping language C Defined "HAVE_FENV_H" to "1" ================================================================================ TEST checkCompression from config.libraries(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/libraries.py:266) TESTING: checkCompression from config.libraries(config/BuildSystem/config/libraries.py:266) Check for libz, the compression library Checking for function compress in library [''] [] Pushing language C sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.c: In function 'main': /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.c:7:87: warning: variable 'ret' set but not used [-Wunused-but-set-variable] char *dest = 0; const char *source = 0; unsigned long destLen = 0, sourceLen = 0; int ret = 0; ret = compress(dest, &destLen, source, sourceLen); ^ } Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ int compress(char *dest, unsigned long *destLen, const char *source, unsigned long sourceLen); int main() { char *dest = 0; const char *source = 0; unsigned long destLen = 0, sourceLen = 0; int ret = 0; ret = compress(dest, &destLen, source, sourceLen); ; return 0; } Pushing language C Popping language C sh: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o -ldl Executing: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o -ldl sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded output: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Pushing language C Popping language C in cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o -ldl Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ int compress(char *dest, unsigned long *destLen, const char *source, unsigned long sourceLen); int main() { char *dest = 0; const char *source = 0; unsigned long destLen = 0, sourceLen = 0; int ret = 0; ret = compress(dest, &destLen, source, sourceLen); ; return 0; } Popping language C Checking for function uncompress in library [''] [] Pushing language C sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.c: In function 'main': /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.c:7:87: warning: variable 'ret' set but not used [-Wunused-but-set-variable] char *dest = 0; const char *source = 0; unsigned long destLen = 0, sourceLen = 0; int ret = 0; ret = uncompress(dest, &destLen, source, sourceLen); ^ } Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ int uncompress(char *dest, unsigned long *destLen, const char *source, unsigned long sourceLen); int main() { char *dest = 0; const char *source = 0; unsigned long destLen = 0, sourceLen = 0; int ret = 0; ret = uncompress(dest, &destLen, source, sourceLen); ; return 0; } Pushing language C Popping language C sh: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o -ldl Executing: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o -ldl sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded output: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Pushing language C Popping language C in cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o -ldl Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ int uncompress(char *dest, unsigned long *destLen, const char *source, unsigned long sourceLen); int main() { char *dest = 0; const char *source = 0; unsigned long destLen = 0, sourceLen = 0; int ret = 0; ret = uncompress(dest, &destLen, source, sourceLen); ; return 0; } Popping language C Compression functions are linked in by default ================================================================================ TEST checkRealtime from config.libraries(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/libraries.py:287) TESTING: checkRealtime from config.libraries(config/BuildSystem/config/libraries.py:287) Check for presence of clock_gettime() in realtime library (POSIX Realtime extensions) Checking for function clock_gettime in library [''] [] Pushing language C sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include int main() { struct timespec tp; clock_gettime(CLOCK_REALTIME,&tp);; return 0; } Pushing language C Popping language C sh: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o -ldl Executing: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o -ldl sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded output: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Pushing language C Popping language C in cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o -ldl Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ #include int main() { struct timespec tp; clock_gettime(CLOCK_REALTIME,&tp);; return 0; } Popping language C realtime functions are linked in by default ================================================================================ TEST checkDynamic from config.libraries(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/libraries.py:303) TESTING: checkDynamic from config.libraries(config/BuildSystem/config/libraries.py:303) Check for the header and libraries necessary for dynamic library manipulation ================================================================================ TEST configureTimers from PETSc.utilities.timer(/global/u2/m/madams/petsc_maint/config/PETSc/utilities/timer.py:35) TESTING: configureTimers from PETSc.utilities.timer(config/PETSc/utilities/timer.py:35) Sets PETSC_HAVE_FAST_MPI_WTIME PETSC_USE_READ_REAL_TIME PETSC_USE_MICROSOFT_TIME. Checking for function MPI_CRAY_barrier in library [''] [] Pushing language C sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPI_CRAY_barrier(); int main() { MPI_CRAY_barrier() ; return 0; } Pushing language C Popping language C sh: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o -ldl Executing: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o -ldl sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o: In function `main': conftest.c:(.text.startup+0x7): undefined reference to `MPI_CRAY_barrier' /usr/bin/ld: link errors found, deleting executable `/scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest' collect2: error: ld returned 1 exit status output: ret = 256 error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o: In function `main': conftest.c:(.text.startup+0x7): undefined reference to `MPI_CRAY_barrier' /usr/bin/ld: link errors found, deleting executable `/scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest' collect2: error: ld returned 1 exit status } Pushing language C Popping language C in cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o -ldl Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char MPI_CRAY_barrier(); int main() { MPI_CRAY_barrier() ; return 0; } Popping language C Cray-MPI test failure ================================================================================ TEST configureMissingDefines from PETSc.utilities.missing(/global/u2/m/madams/petsc_maint/config/PETSc/utilities/missing.py:35) TESTING: configureMissingDefines from PETSc.utilities.missing(config/PETSc/utilities/missing.py:35) Checks for limits All intermediate test results are stored in /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" #ifdef PETSC_HAVE_LIMITS_H #include #endif int main() { int i=INT_MAX; if (i); ; return 0; } sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" #ifdef PETSC_HAVE_FLOAT_H #include #endif int main() { double d=DBL_MAX; if (d); ; return 0; } ================================================================================ TEST configureMissingUtypeTypedefs from PETSc.utilities.missing(/global/u2/m/madams/petsc_maint/config/PETSc/utilities/missing.py:45) TESTING: configureMissingUtypeTypedefs from PETSc.utilities.missing(config/PETSc/utilities/missing.py:45) Checks if u_short is undefined sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.c: In function 'main': /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.c:6:9: warning: unused variable 'foo' [-Wunused-variable] u_short foo; ^ } Source: #include "confdefs.h" #include "conffix.h" #include int main() { u_short foo; ; return 0; } ================================================================================ TEST configureMissingFunctions from PETSc.utilities.missing(/global/u2/m/madams/petsc_maint/config/PETSc/utilities/missing.py:51) TESTING: configureMissingFunctions from PETSc.utilities.missing(config/PETSc/utilities/missing.py:51) Checks for SOCKETS ================================================================================ TEST configureMissingSignals from PETSc.utilities.missing(/global/u2/m/madams/petsc_maint/config/PETSc/utilities/missing.py:71) TESTING: configureMissingSignals from PETSc.utilities.missing(config/PETSc/utilities/missing.py:71) Check for missing signals, and define MISSING_ if necessary sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGABRT; if (i); ; return 0; } sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGALRM; if (i); ; return 0; } sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGBUS; if (i); ; return 0; } sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGCHLD; if (i); ; return 0; } sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGCONT; if (i); ; return 0; } sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGFPE; if (i); ; return 0; } sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGHUP; if (i); ; return 0; } sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGILL; if (i); ; return 0; } sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGINT; if (i); ; return 0; } sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGKILL; if (i); ; return 0; } sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGPIPE; if (i); ; return 0; } sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGQUIT; if (i); ; return 0; } sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGSEGV; if (i); ; return 0; } sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGSTOP; if (i); ; return 0; } sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGSYS; if (i); ; return 0; } sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGTERM; if (i); ; return 0; } sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGTRAP; if (i); ; return 0; } sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGTSTP; if (i); ; return 0; } sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGURG; if (i); ; return 0; } sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGUSR1; if (i); ; return 0; } sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" #include int main() { int i=SIGUSR2; if (i); ; return 0; } ================================================================================ TEST configureMissingGetdomainnamePrototype from PETSc.utilities.missing(/global/u2/m/madams/petsc_maint/config/PETSc/utilities/missing.py:88) TESTING: configureMissingGetdomainnamePrototype from PETSc.utilities.missing(config/PETSc/utilities/missing.py:88) sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.c: In function 'main': /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.c:14:5: warning: unused variable 'err' [-Wunused-variable] int err = getdomainname(test,10); ^ } Source: #include "confdefs.h" #include "conffix.h" #ifdef PETSC_HAVE_UNISTD_H #include #endif #ifdef PETSC_HAVE_NETDB_H #include #endif int main() { char test[10]; int err = getdomainname(test,10); ; return 0; } Pushing language Cxx sh: CC -c -o /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.cc Executing: CC -c -o /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.cc sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.cc: In function 'int main()': /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.cc:14:5: warning: unused variable 'err' [-Wunused-variable] int err = getdomainname(test,10); ^ } Source: #include "confdefs.h" #include "conffix.h" #ifdef PETSC_HAVE_UNISTD_H #include #endif #ifdef PETSC_HAVE_NETDB_H #include #endif int main() { char test[10]; int err = getdomainname(test,10); ; return 0; } Pushing language CXX Popping language CXX sh: CC -o /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.o -ldl Executing: CC -o /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.o -ldl sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded output: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Pushing language CXX Popping language CXX in CC -o /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.o -ldl Source: #include "confdefs.h" #include "conffix.h" #ifdef PETSC_HAVE_UNISTD_H #include #endif #ifdef PETSC_HAVE_NETDB_H #include #endif int main() { char test[10]; int err = getdomainname(test,10); ; return 0; } Popping language Cxx ================================================================================ TEST configureMissingSrandPrototype from PETSc.utilities.missing(/global/u2/m/madams/petsc_maint/config/PETSc/utilities/missing.py:110) TESTING: configureMissingSrandPrototype from PETSc.utilities.missing(config/PETSc/utilities/missing.py:110) sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.c: In function 'main': /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.c:10:8: warning: variable 'a' set but not used [-Wunused-but-set-variable] double a; ^ } Source: #include "confdefs.h" #include "conffix.h" #ifdef PETSC_HAVE_STDLIB_H #include #endif int main() { double a; long b=10; srand(b); a=drand48(); ; return 0; } Pushing language Cxx sh: CC -c -o /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.cc Executing: CC -c -o /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.cc sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.cc: In function 'int main()': /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.cc:10:8: warning: variable 'a' set but not used [-Wunused-but-set-variable] double a; ^ } Source: #include "confdefs.h" #include "conffix.h" #ifdef PETSC_HAVE_STDLIB_H #include #endif int main() { double a; long b=10; srand(b); a=drand48(); ; return 0; } Pushing language CXX Popping language CXX sh: CC -o /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.o -ldl Executing: CC -o /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.o -ldl sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded output: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Pushing language CXX Popping language CXX in CC -o /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing/conftest.o -ldl Source: #include "confdefs.h" #include "conffix.h" #ifdef PETSC_HAVE_STDLIB_H #include #endif int main() { double a; long b=10; srand(b); a=drand48(); ; return 0; } Popping language Cxx ================================================================================ TEST configureMissingIntelFastPrototypes from PETSc.utilities.missing(/global/u2/m/madams/petsc_maint/config/PETSc/utilities/missing.py:134) TESTING: configureMissingIntelFastPrototypes from PETSc.utilities.missing(config/PETSc/utilities/missing.py:134) ================================================================================ TEST configureFortranCommandLine from PETSc.utilities.fortranCommandLine(/global/u2/m/madams/petsc_maint/config/PETSc/utilities/fortranCommandLine.py:27) TESTING: configureFortranCommandLine from PETSc.utilities.fortranCommandLine(config/PETSc/utilities/fortranCommandLine.py:27) Check for the mechanism to retrieve command line arguments in Fortran Pushing language FC Checking for function in library [''] [] Pushing language FC sh: ftn -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -Wall -Wno-unused-variable -Wno-unused-dummy-argument -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.F Executing: ftn -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -Wall -Wno-unused-variable -Wno-unused-dummy-argument -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.F sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: program main integer i character*(80) arg call get_command_argument(i,arg) end Pushing language FC Popping language FC sh: ftn -o /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest -Wall -Wno-unused-variable -Wno-unused-dummy-argument -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o -ldl Executing: ftn -o /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest -Wall -Wno-unused-variable -Wno-unused-dummy-argument -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o -ldl sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded output: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Pushing language FC Popping language FC in ftn -o /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest -Wall -Wno-unused-variable -Wno-unused-dummy-argument -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o -ldl Source: program main integer i character*(80) arg call get_command_argument(i,arg) end Popping language FC Defined "HAVE_FORTRAN_GET_COMMAND_ARGUMENT" to "1" Popping language FC Pushing language C Checking for function get_command_argument_ in library [''] [] Pushing language C sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char get_command_argument_(); int main() { get_command_argument_() ; return 0; } Pushing language C Popping language C sh: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o -ldl Executing: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o -ldl sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o: In function `main': conftest.c:(.text.startup+0x7): undefined reference to `get_command_argument_' /usr/bin/ld: link errors found, deleting executable `/scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest' collect2: error: ld returned 1 exit status output: ret = 256 error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o: In function `main': conftest.c:(.text.startup+0x7): undefined reference to `get_command_argument_' /usr/bin/ld: link errors found, deleting executable `/scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest' collect2: error: ld returned 1 exit status } Pushing language C Popping language C in cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o -ldl Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char get_command_argument_(); int main() { get_command_argument_() ; return 0; } Popping language C Checking for function getarg_ in library [''] [] Pushing language C sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char getarg_(); int main() { getarg_() ; return 0; } Pushing language C Popping language C sh: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o -ldl Executing: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o -ldl sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o: In function `main': conftest.c:(.text.startup+0x7): undefined reference to `getarg_' /usr/bin/ld: link errors found, deleting executable `/scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest' collect2: error: ld returned 1 exit status output: ret = 256 error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o: In function `main': conftest.c:(.text.startup+0x7): undefined reference to `getarg_' /usr/bin/ld: link errors found, deleting executable `/scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest' collect2: error: ld returned 1 exit status } Pushing language C Popping language C in cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o -ldl Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char getarg_(); int main() { getarg_() ; return 0; } Popping language C Checking for function ipxfargc_ sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char ipxfargc_(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char ipxfargc_(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_ipxfargc_) || defined (__stub___ipxfargc_) choke me #else ipxfargc_(); #endif ; return 0; } Pushing language C Popping language C sh: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Executing: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o: In function `main': conftest.c:(.text.startup+0x7): undefined reference to `ipxfargc_' /usr/bin/ld: link errors found, deleting executable `/scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest' collect2: error: ld returned 1 exit status output: ret = 256 error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o: In function `main': conftest.c:(.text.startup+0x7): undefined reference to `ipxfargc_' /usr/bin/ld: link errors found, deleting executable `/scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest' collect2: error: ld returned 1 exit status } Pushing language C Popping language C in cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char ipxfargc_(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char ipxfargc_(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_ipxfargc_) || defined (__stub___ipxfargc_) choke me #else ipxfargc_(); #endif ; return 0; } Checking for function f90_unix_MP_iargc sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char f90_unix_MP_iargc(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char f90_unix_MP_iargc(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_f90_unix_MP_iargc) || defined (__stub___f90_unix_MP_iargc) choke me #else f90_unix_MP_iargc(); #endif ; return 0; } Pushing language C Popping language C sh: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Executing: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o: In function `main': conftest.c:(.text.startup+0x7): undefined reference to `f90_unix_MP_iargc' /usr/bin/ld: link errors found, deleting executable `/scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest' collect2: error: ld returned 1 exit status output: ret = 256 error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o: In function `main': conftest.c:(.text.startup+0x7): undefined reference to `f90_unix_MP_iargc' /usr/bin/ld: link errors found, deleting executable `/scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest' collect2: error: ld returned 1 exit status } Pushing language C Popping language C in cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char f90_unix_MP_iargc(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char f90_unix_MP_iargc(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_f90_unix_MP_iargc) || defined (__stub___f90_unix_MP_iargc) choke me #else f90_unix_MP_iargc(); #endif ; return 0; } Checking for function PXFGETARG sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char PXFGETARG(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char PXFGETARG(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_PXFGETARG) || defined (__stub___PXFGETARG) choke me #else PXFGETARG(); #endif ; return 0; } Pushing language C Popping language C sh: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Executing: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o: In function `main': conftest.c:(.text.startup+0x7): undefined reference to `PXFGETARG' /usr/bin/ld: link errors found, deleting executable `/scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest' collect2: error: ld returned 1 exit status output: ret = 256 error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o: In function `main': conftest.c:(.text.startup+0x7): undefined reference to `PXFGETARG' /usr/bin/ld: link errors found, deleting executable `/scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest' collect2: error: ld returned 1 exit status } Pushing language C Popping language C in cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char PXFGETARG(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char PXFGETARG(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_PXFGETARG) || defined (__stub___PXFGETARG) choke me #else PXFGETARG(); #endif ; return 0; } Checking for function iargc_ sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char iargc_(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char iargc_(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_iargc_) || defined (__stub___iargc_) choke me #else iargc_(); #endif ; return 0; } Pushing language C Popping language C sh: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Executing: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o: In function `main': conftest.c:(.text.startup+0x7): undefined reference to `iargc_' /usr/bin/ld: link errors found, deleting executable `/scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest' collect2: error: ld returned 1 exit status output: ret = 256 error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o: In function `main': conftest.c:(.text.startup+0x7): undefined reference to `iargc_' /usr/bin/ld: link errors found, deleting executable `/scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest' collect2: error: ld returned 1 exit status } Pushing language C Popping language C in cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char iargc_(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char iargc_(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_iargc_) || defined (__stub___iargc_) choke me #else iargc_(); #endif ; return 0; } Checking for function GETARG@16 sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c sh: Possible ERROR while running compiler: ret = 256 error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c:10:12: error: stray '@' in program char GETARG@16(); ^ /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c:10:13: error: expected '=', ',', ';', 'asm' or '__attribute__' before numeric constant char GETARG@16(); ^ /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c: In function 'main': /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c:17:27: error: missing ')' after "defined" #if defined (__stub_GETARG@16) || defined (__stub___GETARG@16) ^ /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c:17:28: error: missing binary operator before token "16" #if defined (__stub_GETARG@16) || defined (__stub___GETARG@16) ^ /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c:20:7: error: stray '@' in program GETARG@16(); ^ /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c:20:1: error: 'GETARG' undeclared (first use in this function) GETARG@16(); ^ /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c:20:1: note: each undeclared identifier is reported only once for each function it appears in /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c:20:8: error: expected ';' before numeric constant GETARG@16(); ^ } Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char GETARG@16(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char GETARG@16(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub_GETARG@16) || defined (__stub___GETARG@16) choke me #else GETARG@16(); #endif ; return 0; } Compile failed inside link Checking for function _gfortran_iargc sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char _gfortran_iargc(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _gfortran_iargc(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub__gfortran_iargc) || defined (__stub____gfortran_iargc) choke me #else _gfortran_iargc(); #endif ; return 0; } Pushing language C Popping language C sh: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Executing: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded output: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Pushing language C Popping language C in cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.functions/conftest.o -ldl Source: #include "confdefs.h" #include "conffix.h" /* System header to define __stub macros and hopefully few prototypes, which can conflict with char _gfortran_iargc(); below. */ #include /* Override any gcc2 internal prototype to avoid an error. */ /* We use char because int might match the return type of a gcc2 builtin and then its argument prototype would still apply. */ char _gfortran_iargc(); int main() { /* The GNU C library defines this for functions which it implements to always fail with ENOSYS. Some functions are actually named something starting with __ and the normal name is an alias. */ #if defined (__stub__gfortran_iargc) || defined (__stub____gfortran_iargc) choke me #else _gfortran_iargc(); #endif ; return 0; } Defined "HAVE__GFORTRAN_IARGC" to "1" Defined "HAVE_GFORTRAN_IARGC" to "1" Popping language C ================================================================================ TEST configureScalarType from PETSc.utilities.scalarTypes(/global/u2/m/madams/petsc_maint/config/PETSc/utilities/scalarTypes.py:37) TESTING: configureScalarType from PETSc.utilities.scalarTypes(config/PETSc/utilities/scalarTypes.py:37) Choose between real and complex numbers Defined "USE_SCALAR_REAL" to "1" Scalar type is real Pushing language C All intermediate test results are stored in /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.scalarTypes sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.scalarTypes/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.scalarTypes -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.scalarTypes/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.scalarTypes/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.scalarTypes -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.scalarTypes/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.scalarTypes/conftest.c: In function 'main': /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.scalarTypes/conftest.c:6:21: warning: unused variable 'a' [-Wunused-variable] double b = 2.0; int a = isnan(b); ^ } Source: #include "confdefs.h" #include "conffix.h" #include int main() { double b = 2.0; int a = isnan(b); ; return 0; } Pushing language C Popping language C sh: cc -o /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.scalarTypes/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.scalarTypes/conftest.o -ldl Executing: cc -o /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.scalarTypes/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.scalarTypes/conftest.o -ldl sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded output: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Pushing language C Popping language C in cc -o /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.scalarTypes/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.scalarTypes/conftest.o -ldl Source: #include "confdefs.h" #include "conffix.h" #include int main() { double b = 2.0; int a = isnan(b); ; return 0; } Defined "HAVE_ISNAN" to "1" sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.scalarTypes/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.scalarTypes -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.scalarTypes/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.scalarTypes/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.scalarTypes -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.scalarTypes/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.scalarTypes/conftest.c: In function 'main': /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.scalarTypes/conftest.c:6:21: warning: unused variable 'a' [-Wunused-variable] double b = 2.0; int a = isinf(b); ^ } Source: #include "confdefs.h" #include "conffix.h" #include int main() { double b = 2.0; int a = isinf(b); ; return 0; } Pushing language C Popping language C sh: cc -o /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.scalarTypes/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.scalarTypes/conftest.o -ldl Executing: cc -o /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.scalarTypes/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.scalarTypes/conftest.o -ldl sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded output: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Pushing language C Popping language C in cc -o /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.scalarTypes/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.scalarTypes/conftest.o -ldl Source: #include "confdefs.h" #include "conffix.h" #include int main() { double b = 2.0; int a = isinf(b); ; return 0; } Defined "HAVE_ISINF" to "1" sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.scalarTypes/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.scalarTypes -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.scalarTypes/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.scalarTypes/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.scalarTypes -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.scalarTypes/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.scalarTypes/conftest.c: In function 'main': /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.scalarTypes/conftest.c:6:1: warning: implicit declaration of function '_isnan' [-Wimplicit-function-declaration] double b = 2.0;int a = _isnan(b); ^ /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.scalarTypes/conftest.c:6:20: warning: unused variable 'a' [-Wunused-variable] double b = 2.0;int a = _isnan(b); ^ } Source: #include "confdefs.h" #include "conffix.h" #include int main() { double b = 2.0;int a = _isnan(b); ; return 0; } Pushing language C Popping language C sh: cc -o /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.scalarTypes/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.scalarTypes/conftest.o -ldl Executing: cc -o /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.scalarTypes/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.scalarTypes/conftest.o -ldl sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.scalarTypes/conftest.o: In function `main': conftest.c:(.text.startup+0x12): undefined reference to `_isnan' /usr/bin/ld: link errors found, deleting executable `/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.scalarTypes/conftest' collect2: error: ld returned 1 exit status output: ret = 256 error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.scalarTypes/conftest.o: In function `main': conftest.c:(.text.startup+0x12): undefined reference to `_isnan' /usr/bin/ld: link errors found, deleting executable `/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.scalarTypes/conftest' collect2: error: ld returned 1 exit status } Pushing language C Popping language C in cc -o /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.scalarTypes/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.scalarTypes/conftest.o -ldl Source: #include "confdefs.h" #include "conffix.h" #include int main() { double b = 2.0;int a = _isnan(b); ; return 0; } sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.scalarTypes/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.scalarTypes -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.scalarTypes/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.scalarTypes/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.scalarTypes -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.scalarTypes/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.scalarTypes/conftest.c: In function 'main': /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.scalarTypes/conftest.c:6:1: warning: implicit declaration of function '_finite' [-Wimplicit-function-declaration] double b = 2.0;int a = _finite(b); ^ /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.scalarTypes/conftest.c:6:20: warning: unused variable 'a' [-Wunused-variable] double b = 2.0;int a = _finite(b); ^ } Source: #include "confdefs.h" #include "conffix.h" #include int main() { double b = 2.0;int a = _finite(b); ; return 0; } Pushing language C Popping language C sh: cc -o /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.scalarTypes/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.scalarTypes/conftest.o -ldl Executing: cc -o /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.scalarTypes/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.scalarTypes/conftest.o -ldl sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.scalarTypes/conftest.o: In function `main': conftest.c:(.text.startup+0x12): undefined reference to `_finite' /usr/bin/ld: link errors found, deleting executable `/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.scalarTypes/conftest' collect2: error: ld returned 1 exit status output: ret = 256 error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.scalarTypes/conftest.o: In function `main': conftest.c:(.text.startup+0x12): undefined reference to `_finite' /usr/bin/ld: link errors found, deleting executable `/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.scalarTypes/conftest' collect2: error: ld returned 1 exit status } Pushing language C Popping language C in cc -o /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.scalarTypes/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.scalarTypes/conftest.o -ldl Source: #include "confdefs.h" #include "conffix.h" #include int main() { double b = 2.0;int a = _finite(b); ; return 0; } Popping language C ================================================================================ TEST configurePrecision from PETSc.utilities.scalarTypes(/global/u2/m/madams/petsc_maint/config/PETSc/utilities/scalarTypes.py:73) TESTING: configurePrecision from PETSc.utilities.scalarTypes(config/PETSc/utilities/scalarTypes.py:73) Set the default real number precision for PETSc objects Defined "USE_REAL_DOUBLE" to "1" Precision is double ================================================================================ TEST configureLibraryOptions from PETSc.utilities.libraryOptions(/global/u2/m/madams/petsc_maint/config/PETSc/utilities/libraryOptions.py:48) TESTING: configureLibraryOptions from PETSc.utilities.libraryOptions(config/PETSc/utilities/libraryOptions.py:48) Sets PETSC_USE_DEBUG, PETSC_USE_INFO, PETSC_USE_LOG, PETSC_USE_CTABLE and PETSC_USE_FORTRAN_KERNELS Defined "USE_LOG" to "1" Defined "USE_INFO" to "1" Defined "USE_CTABLE" to "1" **********Checking if running on BGL/IBM detected Checking for function bgl_perfctr_void in library [''] [] Pushing language C sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.scalarTypes -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.scalarTypes -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char bgl_perfctr_void(); int main() { bgl_perfctr_void() ; return 0; } Pushing language C Popping language C sh: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o -ldl Executing: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o -ldl sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o: In function `main': conftest.c:(.text.startup+0x7): undefined reference to `bgl_perfctr_void' /usr/bin/ld: link errors found, deleting executable `/scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest' collect2: error: ld returned 1 exit status output: ret = 256 error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o: In function `main': conftest.c:(.text.startup+0x7): undefined reference to `bgl_perfctr_void' /usr/bin/ld: link errors found, deleting executable `/scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest' collect2: error: ld returned 1 exit status } Pushing language C Popping language C in cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o -ldl Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char bgl_perfctr_void(); int main() { bgl_perfctr_void() ; return 0; } Popping language C Checking for function ADIOI_BGL_Open in library [''] [] Pushing language C sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.scalarTypes -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.scalarTypes -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char ADIOI_BGL_Open(); int main() { ADIOI_BGL_Open() ; return 0; } Pushing language C Popping language C sh: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o -ldl Executing: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o -ldl sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o: In function `main': conftest.c:(.text.startup+0x7): undefined reference to `ADIOI_BGL_Open' /usr/bin/ld: link errors found, deleting executable `/scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest' collect2: error: ld returned 1 exit status output: ret = 256 error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o: In function `main': conftest.c:(.text.startup+0x7): undefined reference to `ADIOI_BGL_Open' /usr/bin/ld: link errors found, deleting executable `/scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest' collect2: error: ld returned 1 exit status } Pushing language C Popping language C in cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o -ldl Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char ADIOI_BGL_Open(); int main() { ADIOI_BGL_Open() ; return 0; } Popping language C *********BGL/IBM test failure Defined "USE_BACKWARD_LOOP" to "1" Defined "Alignx(a,b)" to " " Defined "USE_64BIT_INDICES" to "1" Checking for function __floatdidf in library ['-lgcc_s.1'] [] Pushing language C sh: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.scalarTypes -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.c Executing: cc -c -o /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o -I/scratch/scratchdirs/madams/petsc-i5209_/config.compilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.setCompilers -I/scratch/scratchdirs/madams/petsc-i5209_/config.headers -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.cacheDetails -I/scratch/scratchdirs/madams/petsc-i5209_/config.types -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.missing -I/scratch/scratchdirs/madams/petsc-i5209_/config.functions -I/scratch/scratchdirs/madams/petsc-i5209_/config.libraries -I/scratch/scratchdirs/madams/petsc-i5209_/PETSc.utilities.scalarTypes -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.c sh: Possible ERROR while running compiler: error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded } Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char __floatdidf(); int main() { __floatdidf() ; return 0; } Pushing language C Popping language C sh: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o -lgcc_s.1 -ldl Executing: cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o -lgcc_s.1 -ldl sh: Possible ERROR while running linker: ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded /usr/bin/ld: cannot find -lgcc_s.1 collect2: error: ld returned 1 exit status output: ret = 256 error message = {ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded /usr/bin/ld: cannot find -lgcc_s.1 collect2: error: ld returned 1 exit status } Pushing language C Popping language C in cc -o /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops /scratch/scratchdirs/madams/petsc-i5209_/config.libraries/conftest.o -lgcc_s.1 -ldl Source: #include "confdefs.h" #include "conffix.h" /* Override any gcc2 internal prototype to avoid an error. */ char __floatdidf(); int main() { __floatdidf() ; return 0; } Popping language C ================================================================================ TEST configureISColorValueType from PETSc.utilities.libraryOptions(/global/u2/m/madams/petsc_maint/config/PETSc/utilities/libraryOptions.py:92) TESTING: configureISColorValueType from PETSc.utilities.libraryOptions(config/PETSc/utilities/libraryOptions.py:92) Sets PETSC_IS_COLOR_VALUE_TYPE, MPIU_COLORING_VALUE, IS_COLORING_MAX required by ISColor Defined "MPIU_COLORING_VALUE" to "MPI_UNSIGNED_SHORT" Defined "IS_COLORING_MAX" to "65535" Defined "IS_COLOR_VALUE_TYPE" to "short" Pushing language C ================================================================================ TEST configureLibrary from config.packages.MPI(/global/u2/m/madams/petsc_maint/config/BuildSystem/config/packages/MPI.py:744) TESTING: configureLibrary from config.packages.MPI(config/BuildSystem/config/packages/MPI.py:744) Calls the regular package configureLibrary and then does an additional test needed by MPI ================================================================================== Checking for a functional MPI sh: uname -s Executing: uname -s sh: Linux Looking for MPI in directory starting with mpich Could not locate an existing copy of mpich: [] Downloading MPI =============================================================================== Trying to download http://ftp.mcs.anl.gov/pub/petsc/tmp/mpich-master-v3.0.4-106-g3adb59c.tar.gz for MPI =============================================================================== Downloading http://ftp.mcs.anl.gov/pub/petsc/tmp/mpich-master-v3.0.4-106-g3adb59c.tar.gz to /global/u2/m/madams/petsc_maint/externalpackages/_d_mpich-master-v3.0.4-106-g3adb59c.tar.gz Extracting /global/u2/m/madams/petsc_maint/externalpackages/_d_mpich-master-v3.0.4-106-g3adb59c.tar.gz sh: cd /global/u2/m/madams/petsc_maint/externalpackages; chmod -R a+r mpich-3.0.4-106;find mpich-3.0.4-106 -type d -name "*" -exec chmod a+rx {} \; Executing: cd /global/u2/m/madams/petsc_maint/externalpackages; chmod -R a+r mpich-3.0.4-106;find mpich-3.0.4-106 -type d -name "*" -exec chmod a+rx {} \; sh: Looking for MPI in directory starting with mpich Found a copy of MPI in mpich-3.0.4-106 Looking for MPI in directory starting with mpich Found a copy of MPI in mpich-3.0.4-106 Looking for MPI in directory starting with mpich Found a copy of MPI in mpich-3.0.4-106 Pushing language C All intermediate test results are stored in /scratch/scratchdirs/madams/petsc-i5209_/config.packages.MPI Popping language C Pushing language Cxx Popping language Cxx Pushing language FC sh: ftn -v Executing: ftn -v sh: Popping language FC sh: uname -s Executing: uname -s sh: Linux Have to rebuild MPI, /global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/args.petsc != /global/homes/m/madams/petsc_maint/arch-xe6-opt64/conf/MPI =============================================================================== Running configure on MPICH; this may take several minutes =============================================================================== sh: cd /global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106 && ./configure --prefix=/global/homes/m/madams/petsc_maint/arch-xe6-opt64 CC="cc" CFLAGS=" -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops " CXX="CC" CXXFLAGS=" -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops " FC="ftn" FCFLAGS=" -Wall -Wno-unused-variable -Wno-unused-dummy-argument -O3 -ffast-math -funroll-loops " F77="ftn" FFLAGS=" -Wall -Wno-unused-variable -Wno-unused-dummy-argument -O3 -ffast-math -funroll-loops " --enable-shared --enable-sharedlibs=gcc --with-device=ch3:sock --without-mpe --with-pm=hydra --enable-g=meminit --enable-fast Executing: cd /global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106 && ./configure --prefix=/global/homes/m/madams/petsc_maint/arch-xe6-opt64 CC="cc" CFLAGS=" -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops " CXX="CC" CXXFLAGS=" -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops " FC="ftn" FCFLAGS=" -Wall -Wno-unused-variable -Wno-unused-dummy-argument -O3 -ffast-math -funroll-loops " F77="ftn" FFLAGS=" -Wall -Wno-unused-variable -Wno-unused-dummy-argument -O3 -ffast-math -funroll-loops " --enable-shared --enable-sharedlibs=gcc --with-device=ch3:sock --without-mpe --with-pm=hydra --enable-g=meminit --enable-fast sh: Configuring MPICH version 3.0.4 with '--prefix=/global/homes/m/madams/petsc_maint/arch-xe6-opt64' 'CC=cc' 'CFLAGS= -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops ' 'CXX=CC' 'CXXFLAGS= -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops ' 'FC=ftn' 'FCFLAGS= -Wall -Wno-unused-variable -Wno-unused-dummy-argument -O3 -ffast-math -funroll-loops ' 'F77=ftn' 'FFLAGS= -Wall -Wno-unused-variable -Wno-unused-dummy-argument -O3 -ffast-math -funroll-loops ' '--enable-shared' '--enable-sharedlibs=gcc' '--with-device=ch3:sock' '--without-mpe' '--with-pm=hydra' '--enable-g=meminit' '--enable-fast' Running on system: Linux hopper09 2.6.32.59-0.7-default #1 SMP 2012-07-13 15:50:56 +0200 x86_64 x86_64 x86_64 GNU/Linux checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether cc accepts -g... yes checking for cc option to accept ISO C89... none needed checking whether cc understands -c and -o together... yes checking how to run the C preprocessor... cc -E checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... gawk checking whether make sets $(MAKE)... yes checking for style of include used by make... GNU checking whether make supports nested variables... yes checking dependency style of cc... gcc3 checking whether to enable maintainer-specific portions of Makefiles... yes checking for ar... ar checking the archiver (ar) interface... ar checking build system type... x86_64-unknown-linux-gnu checking host system type... x86_64-unknown-linux-gnu checking how to print strings... printf checking for a sed that does not truncate output... /usr/bin/sed checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for fgrep... /usr/bin/grep -F checking for ld used by cc... /scratch/altd/1.0/bin/ld checking if the linker (/scratch/altd/1.0/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 3458764513820540925 checking whether the shell understands some XSI constructs... yes checking whether the shell understands "+="... yes checking how to convert x86_64-unknown-linux-gnu file names to x86_64-unknown-linux-gnu format... func_convert_file_noop checking how to convert x86_64-unknown-linux-gnu file names to toolchain format... func_convert_file_noop checking for /scratch/altd/1.0/bin/ld option to reload object files... -r checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for archiver @FILE support... @ checking for strip... strip checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from cc object... ok checking for sysroot... no checking for mt... mt checking if mt is a manifest tool... no checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if cc supports -fno-rtti -fno-exceptions... no checking for cc option to produce PIC... -fPIC -DPIC checking if cc PIC flag -fPIC -DPIC works... yes checking if cc static flag -static works... yes checking if cc supports -c -o file.o... yes checking if cc supports -c -o file.o... (cached) yes checking whether the cc linker (/scratch/altd/1.0/bin/ld -m elf_x86_64) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking whether make supports nested variables... (cached) yes checking whether we are using the GNU C++ compiler... yes checking whether CC accepts -g... yes checking dependency style of CC... gcc3 checking how to run the C++ preprocessor... CC -E checking for ld used by CC... /scratch/altd/1.0/bin/ld -m elf_x86_64 checking if the linker (/scratch/altd/1.0/bin/ld -m elf_x86_64) is GNU ld... yes checking whether the CC linker (/scratch/altd/1.0/bin/ld -m elf_x86_64) supports shared libraries... yes checking for CC option to produce PIC... -fPIC -DPIC checking if CC PIC flag -fPIC -DPIC works... yes checking if CC static flag -static works... yes checking if CC supports -c -o file.o... yes checking if CC supports -c -o file.o... (cached) yes checking whether the CC linker (/scratch/altd/1.0/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether we are using the GNU Fortran 77 compiler... yes checking whether ftn accepts -g... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking for ftn option to produce PIC... -fPIC checking if ftn PIC flag -fPIC works... yes checking if ftn static flag -static works... yes checking if ftn supports -c -o file.o... yes checking if ftn supports -c -o file.o... (cached) yes checking whether the ftn linker (/scratch/altd/1.0/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether we are using the GNU Fortran compiler... yes checking whether ftn accepts -g... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking for ftn option to produce PIC... -fPIC checking if ftn PIC flag -fPIC works... yes checking if ftn static flag -static works... yes checking if ftn supports -c -o file.o... yes checking if ftn supports -c -o file.o... (cached) yes checking whether the ftn linker (/scratch/altd/1.0/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for getpagesize... yes configure: RUNNING PREREQ FOR ch3:sock configure: ===== configuring src/mpl ===== configure: running /bin/sh ./configure --disable-option-checking '--prefix=/global/homes/m/madams/petsc_maint/arch-xe6-opt64' 'CC=cc' 'CFLAGS= -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops ' 'CXX=CC' 'CXXFLAGS= -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops ' 'FC=ftn' 'FCFLAGS= -Wall -Wno-unused-variable -Wno-unused-dummy-argument -O3 -ffast-math -funroll-loops ' 'F77=ftn' 'FFLAGS= -Wall -Wno-unused-variable -Wno-unused-dummy-argument -O3 -ffast-math -funroll-loops ' '--enable-shared' '--enable-sharedlibs=gcc' '--with-device=ch3:sock' '--without-mpe' '--with-pm=hydra' '--enable-g=meminit' '--enable-fast' '--disable-checkerrors' --cache-file=/dev/null --srcdir=. checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... gawk checking whether make sets $(MAKE)... yes checking for style of include used by make... GNU checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether cc accepts -g... yes checking for cc option to accept ISO C89... none needed checking dependency style of cc... gcc3 checking the archiver (ar) interface... ar checking build system type... x86_64-unknown-linux-gnu checking host system type... x86_64-unknown-linux-gnu checking how to print strings... printf checking for a sed that does not truncate output... /usr/bin/sed checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for fgrep... /usr/bin/grep -F checking for ld used by cc... /scratch/altd/1.0/bin/ld checking if the linker (/scratch/altd/1.0/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 3458764513820540925 checking whether the shell understands some XSI constructs... yes checking whether the shell understands "+="... yes checking how to convert x86_64-unknown-linux-gnu file names to x86_64-unknown-linux-gnu format... func_convert_file_noop checking how to convert x86_64-unknown-linux-gnu file names to toolchain format... func_convert_file_noop checking for /scratch/altd/1.0/bin/ld option to reload object files... -r checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for archiver @FILE support... @ checking for strip... strip checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from cc object... ok checking for sysroot... no checking for mt... mt checking if mt is a manifest tool... no checking how to run the C preprocessor... cc -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if cc supports -fno-rtti -fno-exceptions... no checking for cc option to produce PIC... -fPIC -DPIC checking if cc PIC flag -fPIC -DPIC works... yes checking if cc static flag -static works... yes checking if cc supports -c -o file.o... yes checking if cc supports -c -o file.o... (cached) yes checking whether the cc linker (/scratch/altd/1.0/bin/ld -m elf_x86_64) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking whether make supports nested variables... yes checking for an ANSI C-conforming const... yes checking for C/C++ restrict keyword... __restrict checking for variable argument list macro functionality... yes checking for gcov... gcov checking whether the compiler supports __typeof(variable)... yes checking stdio.h usability... yes checking stdio.h presence... yes checking for stdio.h... yes checking for stdlib.h... (cached) yes checking for string.h... (cached) yes checking stdarg.h usability... yes checking stdarg.h presence... yes checking for stdarg.h... yes checking ctype.h usability... yes checking ctype.h presence... yes checking for ctype.h... yes checking search.h usability... yes checking search.h presence... yes checking for search.h... yes checking for inttypes.h... (cached) yes checking for stdint.h... (cached) yes checking valgrind.h usability... no checking valgrind.h presence... no checking for valgrind.h... no checking memcheck.h usability... no checking memcheck.h presence... no checking for memcheck.h... no checking valgrind/valgrind.h usability... no checking valgrind/valgrind.h presence... no checking for valgrind/valgrind.h... no checking valgrind/memcheck.h usability... no checking valgrind/memcheck.h presence... no checking for valgrind/memcheck.h... no checking helgrind.h usability... no checking helgrind.h presence... no checking for helgrind.h... no checking valgrind/helgrind.h usability... no checking valgrind/helgrind.h presence... no checking for valgrind/helgrind.h... no checking drd.h usability... no checking drd.h presence... no checking for drd.h... no checking valgrind/drd.h usability... no checking valgrind/drd.h presence... no checking for valgrind/drd.h... no checking whether the valgrind headers are broken or too old... yes checking for strdup... yes checking whether strdup needs a declaration... no checking for snprintf... yes checking whether snprintf needs a declaration... no checking for strncmp... yes checking whether strncmp needs a declaration... no checking for putenv... yes checking whether putenv needs a declaration... no checking whether __attribute__ allowed... yes checking whether __attribute__((format)) allowed... yes checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating localdefs config.status: creating include/config.h config.status: executing depfiles commands config.status: executing libtool commands config.status: executing include/mplconfig.h commands config.status: creating include/mplconfig.h - prefix MPL for include/config.h defines configure: ===== done with src/mpl configure ===== configure: sourcing src/mpl/localdefs configure: ===== configuring src/openpa ===== configure: running /bin/sh ./configure --disable-option-checking '--prefix=/global/homes/m/madams/petsc_maint/arch-xe6-opt64' --with-atomic-primitives=auto_allow_emulation 'CC=cc' 'CFLAGS= -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops ' 'CXX=CC' 'CXXFLAGS= -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops ' 'FC=ftn' 'FCFLAGS= -Wall -Wno-unused-variable -Wno-unused-dummy-argument -O3 -ffast-math -funroll-loops ' 'F77=ftn' 'FFLAGS= -Wall -Wno-unused-variable -Wno-unused-dummy-argument -O3 -ffast-math -funroll-loops ' '--enable-shared' '--enable-sharedlibs=gcc' '--with-device=ch3:sock' '--without-mpe' '--with-pm=hydra' '--enable-g=meminit' '--enable-fast' '--disable-checkerrors' --cache-file=/dev/null --srcdir=. checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... gawk checking whether make sets $(MAKE)... yes checking for style of include used by make... GNU checking for gcc... cc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether cc accepts -g... yes checking for cc option to accept ISO C89... none needed checking dependency style of cc... gcc3 checking the archiver (ar) interface... ar checking build system type... x86_64-unknown-linux-gnu checking host system type... x86_64-unknown-linux-gnu checking how to print strings... printf checking for a sed that does not truncate output... /usr/bin/sed checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for fgrep... /usr/bin/grep -F checking for ld used by cc... /scratch/altd/1.0/bin/ld checking if the linker (/scratch/altd/1.0/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 3458764513820540925 checking whether the shell understands some XSI constructs... yes checking whether the shell understands "+="... yes checking how to convert x86_64-unknown-linux-gnu file names to x86_64-unknown-linux-gnu format... func_convert_file_noop checking how to convert x86_64-unknown-linux-gnu file names to toolchain format... func_convert_file_noop checking for /scratch/altd/1.0/bin/ld option to reload object files... -r checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for archiver @FILE support... @ checking for strip... strip checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from cc object... ok checking for sysroot... no checking for mt... mt checking if mt is a manifest tool... no checking how to run the C preprocessor... cc -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if cc supports -fno-rtti -fno-exceptions... no checking for cc option to produce PIC... -fPIC -DPIC checking if cc PIC flag -fPIC -DPIC works... yes checking if cc static flag -static works... yes checking if cc supports -c -o file.o... yes checking if cc supports -c -o file.o... (cached) yes checking whether the cc linker (/scratch/altd/1.0/bin/ld -m elf_x86_64) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking whether make supports nested variables... yes checking for gcc... (cached) cc checking whether we are using the GNU C compiler... (cached) yes checking whether cc accepts -g... (cached) yes checking for cc option to accept ISO C89... (cached) none needed checking dependency style of cc... (cached) gcc3 checking whether to enable assertions... yes checking pthread.h usability... yes checking pthread.h presence... yes checking for pthread.h... yes checking atomic.h usability... no checking atomic.h presence... no checking for atomic.h... no checking intrin.h usability... no checking intrin.h presence... no checking for intrin.h... no checking for inttypes.h... (cached) yes checking for stdint.h... (cached) yes checking stddef.h usability... yes checking stddef.h presence... yes checking for stddef.h... yes checking for C/C++ restrict keyword... __restrict checking for inline... inline checking for an ANSI C-conforming const... yes checking for pthread_create in -lpthread... yes checking for pthread_yield... yes checking if 100 threads can be run at once... yes checking size of void *... 8 checking size of int... 4 checking whether __attribute__ allowed... yes checking whether __attribute__((format)) allowed... yes checking if compiler rejects bogus asm statements... yes checking for support for gcc x86/x86_64 primitives... yes checking for support for gcc x86 primitives for pre-Pentium 4... yes checking for support for gcc ia64 primitives... no checking for support for gcc PowerPC atomics... no checking for support for gcc ARM atomics... no checking for support for gcc SiCortex atomics... no checking for support for gcc atomic intrinsics... yes checking for support for Windows NT atomic intrinsics... no checking for support for Sun atomic operations library... no checking whether to enable strict fairness checks... no checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating src/Makefile config.status: creating test/Makefile config.status: creating openpa.pc config.status: creating src/config.h config.status: executing depfiles commands config.status: executing libtool commands config.status: executing src/opa_config.h commands config.status: creating src/opa_config.h - prefix OPA for src/config.h defines configure: ===== done with src/openpa configure ===== sourcing /global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/src/pm/hydra/mpichprereq checking whether the compiler defines __func__... yes checking whether the compiler defines __FUNC__... no checking whether the compiler sets __FUNCTION__... yes checking whether C compiler accepts option -O2... yes checking whether C compiler option -O2 works with an invalid prototype program... yes checking whether routines compiled with -O2 can be linked with ones compiled without -O2... yes checking for type of weak symbol alias support... pragma weak checking whether __attribute__ ((weak)) allowed... yes checking whether __attribute__ ((weak_import)) allowed... yes checking whether __attribute__((weak,alias(...))) allowed... no checking for multiple weak symbol support... yes checking for shared library (esp. rpath) characteristics of CC... done (results in src/env/cc_shlib.conf) checking whether Fortran 77 compiler accepts option -O2... yes checking whether routines compiled with -O2 can be linked with ones compiled without -O2... yes checking how to get verbose linking output from ftn... -v checking for Fortran 77 libraries of ftn... -L/opt/cray/papi/5.1.2/perf_events/no-cuda/lib -L/opt/cray/udreg/2.3.2-1.0402.7546.1.5.gem/lib64 -L/opt/cray/ugni/5.0-1.0402.7551.1.10.gem/lib64 -L/opt/cray/pmi/4.0.1-1.0000.9753.86.3.gem/lib64 -L/opt/cray/dmapp/4.0.1-1.0402.7784.4.1.gem/lib64 -L/opt/cray/xpmem/0.1-2.0402.45248.1.5.gem/lib64 -L/opt/cray/rca/1.0.0-2.0402.47290.7.1.gem/lib64 -L/usr/common/usg/darshan/2.2.6/lib -L/opt/cray/mpt/6.0.1/gni/mpich2-gnu/48/lib -L/opt/cray/mpt/6.0.1/gni/sma/lib64 -L/opt/cray/libsci/12.1.01/gnu/48/mc12/lib -L/opt/cray/hdf5/1.8.11/gnu/48/lib -L/opt/cray/netcdf/4.3.0/gnu/48/lib -L/opt/cray/xe-sysroot/4.2.34/usr/lib64 -L/opt/cray/xe-sysroot/4.2.34/lib64 -L/opt/cray/xe-sysroot/4.2.34/usr/lib/alps -L/usr/lib/alps -L/opt/gcc/4.8.1/snos/lib/gcc/x86_64-suse-linux/4.8.1 -L/opt/gcc/4.8.1/snos/lib/gcc/x86_64-suse-linux/4.8.1/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/opt/gcc/4.8.1/snos/lib/gcc/x86_64-suse-linux/4.8.1/../../.. -lpapi -lrca -L/opt/cray/atp/1.7.0/lib/ -lAtpSigHCommData -lAtpSigHandler -ldarshan-mpi-io -lz -lfmpich -lmpichcxx -ldarshan-posix -lnetcdff_gnu_48 -lnetcdf_gnu_48 -lhdf5hl_fortran_gnu -lhdf5_hl_gnu -lhdf5_fortran_gnu -lhdf5_gnu -ldl -lscicpp_gnu -lsci_gnu_mp -lstdc++ -lgfortran -lm -lmpichf90_gnu_48 -lmpich_gnu_48 -lmpl -lrt -lsma -lxpmem -ldmapp -lugni -lpmi -lalpslli -lalpsutil -ludreg -lpthread -lgomp -lquadmath checking whether ftn accepts the FLIBS found by autoconf... yes checking whether cc links with FLIBS found by autoconf... yes checking whether Fortran 77 and C objects are compatible... yes checking for linker for Fortran main program... Use Fortran to link programs checking for Fortran 77 name mangling... lower uscore checking for libraries to link Fortran main with C stdio routines... none checking whether Fortran init will work with C... yes checking for extension for Fortran 90 programs... f90 checking whether the Fortran 90 compiler (ftn -Wall -Wno-unused-variable -Wno-unused-dummy-argument -O3 -ffast-math -funroll-loops ) works... yes checking whether the Fortran 90 compiler (ftn -Wall -Wno-unused-variable -Wno-unused-dummy-argument -O3 -ffast-math -funroll-loops ) is a cross-compiler... no checking whether Fortran 90 compiler works with Fortran 77 compiler... yes checking for shared library (esp. rpath) characteristics of F77... done (results in src/env/f77_shlib.conf) checking whether Fortran 77 accepts ! for comments... yes checking for include directory flag for Fortran... -I checking for Fortran 77 flag for library directories... -L checking whether Fortran 77 compiler processes .F files with C preprocessor... yes checking whether ftn allows mismatched arguments... yes checking for shared library (esp. rpath) characteristics of FC... done (results in src/env/fc_shlib.conf) checking whether the Fortran 90 compiler (ftn -Wall -Wno-unused-variable -Wno-unused-dummy-argument -O3 -ffast-math -funroll-loops ) works... yes checking whether the Fortran 90 compiler (ftn -Wall -Wno-unused-variable -Wno-unused-dummy-argument -O3 -ffast-math -funroll-loops ) is a cross-compiler... no checking for Fortran 90 module extension... mod checking for Fortran 90 module include flag... -I checking for Fortran 90 module output directory flag... -J checking whether Fortran 90 compiler accepts option -O2... yes checking whether routines compiled with -O2 can be linked with ones compiled without -O2... yes checking whether Fortran 90 compiler processes .F90 files with C preprocessor... yes checking what libraries are needed to link Fortran90 programs with C routines that use stdio... none checking whether the C++ compiler CC can build an executable... yes checking whether C++ compiler works with string... yes checking whether the compiler supports exceptions... yes checking whether the compiler recognizes bool as a built-in type... yes checking whether the compiler implements namespaces... yes checking whether available... yes checking whether the compiler implements the namespace std... yes checking whether available... no checking for GNU g++ version... 4 . 8 checking for shared library (esp. rpath) characteristics of CXX... done (results in src/env/cxx_shlib.conf) checking whether C++ compiler accepts option -O2... yes checking whether routines compiled with -O2 can be linked with ones compiled without -O2... yes checking for perl... /usr/bin/perl checking for ar... ar checking for ranlib... ranlib checking for killall... killall checking whether install works... yes checking whether mkdir -p works... yes checking for make... make checking whether clock skew breaks make... no checking whether make supports include... yes checking whether make allows comments in actions... yes checking for virtual path format... VPATH checking whether make sets CFLAGS... yes checking for bash... /bin/bash checking whether /bin/bash supports arrays... yes checking for doctext... false checking for an ANSI C-conforming const... yes checking for working volatile... yes checking for C/C++ restrict keyword... __restrict checking for inline... inline checking whether __attribute__ allowed... yes checking whether __attribute__((format)) allowed... yes checking whether byte ordering is bigendian... no checking whether C compiler allows unaligned doubles... yes checking whether cc supports __func__... yes checking whether long double is supported... yes checking whether long long is supported... yes checking for max C struct integer alignment... eight checking for max C struct floating point alignment... sixteen checking for max C struct alignment of structs with doubles... eight checking for max C struct floating point alignment with long doubles... sixteen checking if alignment of structs with doubles is based on position... no checking if alignment of structs with long long ints is based on position... no checking if double alignment breaks rules, find actual alignment... no checking for alignment restrictions on pointers... int or better checking size of char... 1 checking size of unsigned char... 1 checking size of short... 2 checking size of unsigned short... 2 checking size of int... 4 checking size of unsigned int... 4 checking size of long... 8 checking size of unsigned long... 8 checking size of long long... 8 checking size of unsigned long long... 8 checking size of float... 4 checking size of double... 8 checking size of long double... 16 checking size of void *... 8 checking for ANSI C header files... (cached) yes checking stddef.h usability... yes checking stddef.h presence... yes checking for stddef.h... yes checking size of wchar_t... 4 checking size of float_int... 8 checking size of double_int... 16 checking size of long_int... 16 checking size of short_int... 8 checking size of two_int... 8 checking size of long_double_int... 32 checking sys/bitypes.h usability... yes checking sys/bitypes.h presence... yes checking for sys/bitypes.h... yes checking for inttypes.h... (cached) yes checking for stdint.h... (cached) yes checking for int8_t... yes checking for int16_t... yes checking for int32_t... yes checking for int64_t... yes checking for uint8_t... yes checking for uint16_t... yes checking for uint32_t... yes checking for uint64_t... yes checking stdbool.h usability... yes checking stdbool.h presence... yes checking for stdbool.h... yes checking complex.h usability... yes checking complex.h presence... yes checking for complex.h... yes checking size of _Bool... 1 checking size of float _Complex... 8 checking size of double _Complex... 16 checking size of long double _Complex... 32 checking for _Bool... yes checking for float _Complex... yes checking for double _Complex... yes checking for long double _Complex... yes checking for size of Fortran type integer... 4 checking for size of Fortran type real... 4 checking for size of Fortran type double precision... 8 checking whether integer*1 is supported... yes checking whether integer*2 is supported... yes checking whether integer*4 is supported... yes checking whether integer*8 is supported... yes checking whether integer*16 is supported... yes checking whether real*4 is supported... yes checking whether real*8 is supported... yes checking whether real*16 is supported... yes checking for C type matching Fortran real... float checking for C type matching Fortran double... double checking for C type matching Fortran integer... int checking for values of Fortran logicals... True is 1 and False is 0 checking for Fortran 90 integer kind for 8-byte integers... 8 checking for Fortran 90 integer kind for 4-byte integers... 4 checking if real*8 is supported in Fortran 90... yes checking size of bool... 1 checking complex usability... yes checking complex presence... yes checking for complex... yes checking size of Complex... 8 checking size of DoubleComplex... 16 checking size of LongDoubleComplex... 32 checking for alignment restrictions on int64_t... no checking for alignment restrictions on int32_t... no checking size of MPIR_Bsend_data_t... 96 checking for gcc __asm__ and pentium cmpxchgl instruction... no checking for gcc __asm__ and AMD x86_64 cmpxchgq instruction... yes checking for gcc __asm__ and IA64 xchg4 instruction... no checking for gcov... gcov checking for ANSI C header files... (cached) yes checking for stdlib.h... (cached) yes checking stdarg.h usability... yes checking stdarg.h presence... yes checking for stdarg.h... yes checking for sys/types.h... (cached) yes checking for string.h... (cached) yes checking for inttypes.h... (cached) yes checking limits.h usability... yes checking limits.h presence... yes checking for limits.h... yes checking for stddef.h... (cached) yes checking errno.h usability... yes checking errno.h presence... yes checking for errno.h... yes checking sys/socket.h usability... yes checking sys/socket.h presence... yes checking for sys/socket.h... yes checking sys/time.h usability... yes checking sys/time.h presence... yes checking for sys/time.h... yes checking for unistd.h... (cached) yes checking endian.h usability... yes checking endian.h presence... yes checking for endian.h... yes checking assert.h usability... yes checking assert.h presence... yes checking for assert.h... yes checking sys/param.h usability... yes checking sys/param.h presence... yes checking for sys/param.h... yes checking for sys/uio.h... yes checking for size_t... yes checking for setitimer... yes checking for alarm... yes checking for vsnprintf... yes checking for vsprintf... yes checking whether vsnprintf needs a declaration... no checking for strerror... yes checking for strncasecmp... yes checking whether strerror_r is declared... yes checking for strerror_r... yes checking whether strerror_r returns char *... no checking whether strerror_r needs a declaration... no checking for snprintf... yes checking whether snprintf needs a declaration... no checking for qsort... yes checking for va_copy... yes checking for variable argument list macro functionality... yes checking for working alloca.h... yes checking for alloca... yes checking for strdup... yes checking whether strdup needs a declaration... no checking for mkstemp... yes checking whether mkstemp needs a declaration... no checking for fdopen... yes checking whether fdopen needs a declaration... yes checking for putenv... yes checking whether putenv needs a declaration... no checking for clock_gettime... yes checking for clock_getres... yes checking for gethrtime... no checking for mach_absolute_time... no checking for gettimeofday... yes checking for library containing clock_gettime... none required checking for library containing clock_getres... none required checking whether struct timespec is defined in time.h... yes checking for CLOCK_REALTIME defined in time.h... yes checking pthread.h usability... yes checking pthread.h presence... yes checking for pthread.h... yes checking for pthread_key_create in -lpthread... yes checking for pthread_yield... yes checking for pthread_key_create... yes checking for pthread_cleanup_push... no checking whether pthread_cleanup_push is available (may be a macro in pthread.h)... no checking whether pthread.h defines PTHREAD_MUTEX_RECURSIVE_NP... yes checking whether pthread.h defines PTHREAD_MUTEX_RECURSIVE... no checking whether pthread.h defines PTHREAD_MUTEX_ERRORCHECK_NP... yes checking whether pthread.h defines PTHREAD_MUTEX_ERRORCHECK... no checking whether pthread_mutexattr_settype needs a declaration... yes checking for thread local storage specifier... __thread checking for getpid... yes checking sched.h usability... yes checking sched.h presence... yes checking for sched.h... yes checking for unistd.h... (cached) yes checking sys/select.h usability... yes checking sys/select.h presence... yes checking for sys/select.h... yes checking for sched_yield... yes checking for yield... no checking for usleep... yes checking for sleep... yes checking for select... yes checking whether usleep needs a declaration... no checking for sched_setaffinity... yes checking for sched_getaffinity... yes checking for bindprocessor... no checking for thread_policy_set... no checking whether cpu_set_t available... yes checking whether the CPU_SET and CPU_ZERO macros are defined... no configure: RUNNING CONFIGURE FOR F90 CODE checking whether ln -s works... yes checking for extension for Fortran 90 programs... f90 checking for the precision and range of reals... 6 , 37 checking for the precision and range of double precision... 15 , 307 checking for the range of integer... 9 checking for available integer kinds... 2 , 1, 4 , 2, 9 , 4, 18 , 8, checking for available integer ranges... { 2 , 1 , 1 }, { 4 , 2 , 2 }, { 9 , 4 , 4 }, { 18 , 8 , 8 }, checking for unistd.h... (cached) yes checking for string.h... (cached) yes checking for stdlib.h... (cached) yes checking for sys/socket.h... (cached) yes checking for strings.h... (cached) yes checking for assert.h... (cached) yes checking for snprintf... (cached) yes checking whether snprintf needs a declaration... (cached) no checking for strncasecmp... (cached) yes checking for sys/types.h... (cached) yes checking for sys/param.h... (cached) yes checking for sys/socket.h... (cached) yes checking netinet/in.h usability... yes checking netinet/in.h presence... yes checking for netinet/in.h... yes checking netinet/tcp.h usability... yes checking netinet/tcp.h presence... yes checking for netinet/tcp.h... yes checking sys/un.h usability... yes checking sys/un.h presence... yes checking for sys/un.h... yes checking netdb.h usability... yes checking netdb.h presence... yes checking for netdb.h... yes checking for library containing socket... none required checking for library containing gethostbyname... none required checking for socket... yes checking for setsockopt... yes checking for gethostbyname... yes checking whether socklen_t is defined (in sys/socket.h if present)... yes checking whether struct hostent contains h_addr_list... yes checking whether __attribute__ allowed... (cached) yes checking whether __attribute__((format)) allowed... (cached) yes configure: RUNNING CONFIGURE FOR CH3 DEVICE checking for assert.h... (cached) yes checking for limits.h... (cached) yes checking for string.h... (cached) yes checking for sys/types.h... (cached) yes checking for sys/uio.h... (cached) yes checking uuid/uuid.h usability... yes checking uuid/uuid.h presence... yes checking for uuid/uuid.h... yes checking time.h usability... yes checking time.h presence... yes checking for time.h... yes checking ctype.h usability... yes checking ctype.h presence... yes checking for ctype.h... yes checking for unistd.h... (cached) yes checking arpa/inet.h usability... yes checking arpa/inet.h presence... yes checking for arpa/inet.h... yes checking for sys/socket.h... (cached) yes checking for net/if.h... yes checking for pid_t... yes checking for inet_pton... yes checking for gethostname... yes checking whether gethostname needs a declaration... no checking for CFUUIDCreate... no checking for uuid_generate... no checking for time... yes checking for OpenPA atomic primitive availability... yes checking whether byte ordering is bigendian... (cached) no configure: RUNNING CONFIGURE FOR ch3:sock checking for net/if.h... yes checking for netdb.h... (cached) yes checking sys/ioctl.h usability... yes checking sys/ioctl.h presence... yes checking for sys/ioctl.h... yes checking for sys/socket.h... (cached) yes checking sys/sockio.h usability... no checking sys/sockio.h presence... no checking for sys/sockio.h... no checking for sys/types.h... (cached) yes checking for errno.h... (cached) yes checking for netinet/in.h... (cached) yes configure: RUNNING CONFIGURE FOR src/mpid/common/sock checking for strerror... (cached) yes configure: RUNNING CONFIGURE FOR src/mpid/common/sock/poll checking for poll... yes checking for assert.h... (cached) yes checking for errno.h... (cached) yes checking fcntl.h usability... yes checking fcntl.h presence... yes checking for fcntl.h... yes checking for limits.h... (cached) yes checking for netdb.h... (cached) yes checking for netinet/in.h... (cached) yes checking for netinet/tcp.h... (cached) yes checking poll.h usability... yes checking poll.h presence... yes checking for poll.h... yes checking for stdlib.h... (cached) yes checking for sys/param.h... (cached) yes checking sys/poll.h usability... yes checking sys/poll.h presence... yes checking for sys/poll.h... yes checking for sys/types.h... (cached) yes checking for sys/uio.h... (cached) yes checking for unistd.h... (cached) yes checking if struct poll is defined... yes checking if a simple program using poll() can be compiled... yes checking whether bit fields work in ip.h... yes checking for gethostname... (cached) yes checking whether gethostname needs a declaration... (cached) no checking for library containing socket... (cached) none required checking for library containing gethostbyname... (cached) none required checking whether socklen_t is defined (in sys/socket.h if present)... (cached) yes configure: RUNNING CONFIGURE FOR CH3U SOCK CODE checking for assert.h... (cached) yes checking for limits.h... (cached) yes checking for string.h... (cached) yes checking for sys/types.h... (cached) yes checking for sys/uio.h... (cached) yes checking for time.h... (cached) yes checking for ctype.h... (cached) yes checking for unistd.h... (cached) yes checking for arpa/inet.h... (cached) yes checking for sys/socket.h... (cached) yes checking for net/if.h... (cached) yes checking for pid_t... (cached) yes checking for inet_pton... (cached) yes checking for gethostname... (cached) yes checking whether gethostname needs a declaration... (cached) no checking whether we can use struct ifconf... yes configure: ===== configuring src/mpid/common/sock ===== configure: ===== done with src/mpid/common/sock configure ===== configure: ===== configuring src/mpi/romio ===== configure: running /bin/sh ./configure --disable-option-checking '--prefix=/global/homes/m/madams/petsc_maint/arch-xe6-opt64' 'CC=cc' 'CFLAGS= -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops -DNDEBUG -DNVALGRIND -O2' 'CXX=CC' 'CXXFLAGS= -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops -DNDEBUG -DNVALGRIND -O2' 'FC=ftn' 'FCFLAGS= -Wall -Wno-unused-variable -Wno-unused-dummy-argument -O3 -ffast-math -funroll-loops -O2' 'F77=ftn' 'FFLAGS= -Wall -Wno-unused-variable -Wno-unused-dummy-argument -O3 -ffast-math -funroll-loops -O2' '--enable-shared' '--enable-sharedlibs=gcc' '--with-device=ch3:sock' '--without-mpe' '--with-pm=hydra' '--enable-g=meminit' '--enable-fast' '--disable-checkerrors' --cache-file=/dev/null --srcdir=. checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... mkdir -p checking for gawk... gawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking whether to enable maintainer-specific portions of Makefiles... yes checking for style of include used by make... GNU checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether cc accepts -g... yes checking for cc option to accept ISO C89... none needed checking dependency style of cc... gcc3 checking the archiver (ar) interface... ar checking build system type... x86_64-unknown-linux-gnu checking host system type... x86_64-unknown-linux-gnu checking how to print strings... printf checking for a sed that does not truncate output... /usr/bin/sed checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for fgrep... /usr/bin/grep -F checking for ld used by cc... /scratch/altd/1.0/bin/ld -m elf_x86_64 checking if the linker (/scratch/altd/1.0/bin/ld -m elf_x86_64) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 3458764513820540925 checking whether the shell understands some XSI constructs... yes checking whether the shell understands "+="... yes checking how to convert x86_64-unknown-linux-gnu file names to x86_64-unknown-linux-gnu format... func_convert_file_noop checking how to convert x86_64-unknown-linux-gnu file names to toolchain format... func_convert_file_noop checking for /scratch/altd/1.0/bin/ld -m elf_x86_64 option to reload object files... -r checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for archiver @FILE support... @ checking for strip... strip checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from cc object... ok checking for sysroot... no checking for mt... mt checking if mt is a manifest tool... no checking how to run the C preprocessor... cc -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if cc supports -fno-rtti -fno-exceptions... no checking for cc option to produce PIC... -fPIC -DPIC checking if cc PIC flag -fPIC -DPIC works... yes checking if cc static flag -static works... yes checking if cc supports -c -o file.o... yes checking if cc supports -c -o file.o... 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LINUX ROMIO home directory is /global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/src/mpi/romio checking whether we are using the GNU Fortran 77 compiler... yes checking whether ftn accepts -g... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking for ftn option to produce PIC... -fPIC checking if ftn PIC flag -fPIC works... yes checking if ftn static flag -static works... yes checking if ftn supports -c -o file.o... yes checking if ftn supports -c -o file.o... (cached) yes checking whether the ftn linker (/scratch/altd/1.0/bin/ld -m elf_x86_64 -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... 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(cached) yes checking for large file defines... yes checking whether off64_t is an scalar type... yes checking for strerror... yes checking for doctext... false checking for strdup... yes checking whether strdup needs a declaration... no checking for snprintf... yes checking whether snprintf needs a declaration... no checking for lstat... yes checking whether lstat needs a declaration... yes checking for readlink... yes checking whether readlink needs a declaration... no checking for fsync... yes checking whether fsync needs a declaration... no checking for ftruncate... yes checking whether ftruncate needs a declaration... no checking for lseek64... yes checking whether lseek64 needs a declaration... no checking for unistd.h... (cached) yes checking for large file defines... yes setting SYSDEP_INC to checking for C/C++ restrict keyword... __restrict checking whether __attribute__ allowed... yes checking whether __attribute__((format)) allowed... yes checking for gcov... gcov setting CC to cc setting F77 to ftn setting TEST_CC to $(bindir)/mpicc setting TEST_F77 to $(bindir)/mpif77 setting CFLAGS to -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops -DNDEBUG -DNVALGRIND -O2 -DFORTRANUNDERSCORE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_ROMIOCONF_H -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 setting USER_CFLAGS to setting USER_FFLAGS to checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating localdefs config.status: creating mpi2-other/info/Makefile config.status: creating mpi2-other/array/Makefile config.status: creating test/Makefile config.status: creating test/misc.c config.status: creating test/large_file.c config.status: creating test/runtests config.status: creating test-internal/Makefile config.status: creating util/romioinstall config.status: creating include/mpio.h config.status: creating include/mpiof.h config.status: creating mpi2-other/info/fortran/Makefile config.status: creating mpi2-other/array/fortran/Makefile config.status: creating test/fmisc.f config.status: creating test/fcoll_test.f config.status: creating test/pfcoll_test.f config.status: creating test/fperf.f config.status: creating adio/include/romioconf.h config.status: executing depfiles commands config.status: executing libtool commands config.status: executing default-1 commands configure: ===== done with src/mpi/romio configure ===== configure: sourcing src/mpi/romio/localdefs configure: ===== configuring src/pm/hydra ===== configure: running /bin/sh ./configure --disable-option-checking '--prefix=/global/homes/m/madams/petsc_maint/arch-xe6-opt64' 'CC=cc' 'CFLAGS= -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops -DNDEBUG -DNVALGRIND -O2' 'CXX=CC' 'CXXFLAGS= -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops -DNDEBUG -DNVALGRIND -O2' 'FC=ftn' 'FCFLAGS= -Wall -Wno-unused-variable -Wno-unused-dummy-argument -O3 -ffast-math -funroll-loops -O2' 'F77=ftn' 'FFLAGS= -Wall -Wno-unused-variable -Wno-unused-dummy-argument -O3 -ffast-math -funroll-loops -O2' '--enable-shared' '--enable-sharedlibs=gcc' '--with-device=ch3:sock' '--without-mpe' '--with-pm=hydra' '--enable-g=meminit' '--enable-fast' '--disable-checkerrors' --cache-file=/dev/null --srcdir=. checking build system type... x86_64-unknown-linux-gnu checking host system type... x86_64-unknown-linux-gnu checking target system type... x86_64-unknown-linux-gnu checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether cc accepts -g... yes checking for cc option to accept ISO C89... none needed checking how to run the C preprocessor... cc -E checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking minix/config.h usability... no checking minix/config.h presence... no checking for minix/config.h... no checking whether it is safe to define __EXTENSIONS__... yes checking for fgrep... /usr/bin/grep -F checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... mkdir -p checking for gawk... gawk checking whether make sets $(MAKE)... yes checking for style of include used by make... GNU checking dependency style of cc... gcc3 checking the archiver (ar) interface... ar checking whether make supports nested variables... yes checking whether cc understands -c and -o together... yes checking for an ANSI C-conforming const... yes checking for working volatile... yes checking for C/C++ restrict keyword... __restrict checking for inline... inline checking size of unsigned long... 8 checking for size_t... yes checking how to print strings... printf checking for a sed that does not truncate output... /usr/bin/sed checking for ld used by cc... /scratch/altd/1.0/bin/ld -m elf_x86_64 checking if the linker (/scratch/altd/1.0/bin/ld -m elf_x86_64) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 3458764513820540925 checking whether the shell understands some XSI constructs... yes checking whether the shell understands "+="... yes checking how to convert x86_64-unknown-linux-gnu file names to x86_64-unknown-linux-gnu format... func_convert_file_noop checking how to convert x86_64-unknown-linux-gnu file names to toolchain format... func_convert_file_noop checking for /scratch/altd/1.0/bin/ld -m elf_x86_64 option to reload object files... -r checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for archiver @FILE support... @ checking for strip... strip checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from cc object... ok checking for sysroot... no checking for mt... mt checking if mt is a manifest tool... no checking for dlfcn.h... yes checking for objdir... .libs checking if cc supports -fno-rtti -fno-exceptions... no checking for cc option to produce PIC... -fPIC -DPIC checking if cc PIC flag -fPIC -DPIC works... yes checking if cc static flag -static works... yes checking if cc supports -c -o file.o... yes checking if cc supports -c -o file.o... (cached) yes checking whether the cc linker (/scratch/altd/1.0/bin/ld -m elf_x86_64 -m elf_x86_64) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking for variable argument list macro functionality... yes checking whether __attribute__ allowed... yes checking whether __attribute__((format)) allowed... yes checking whether the compiler defines __func__... yes checking whether the compiler defines __FUNC__... no checking whether the compiler sets __FUNCTION__... yes checking for doxygen... no checking for gcov... gcov checking for unistd.h... (cached) yes checking for stdlib.h... (cached) yes checking for string.h... (cached) yes checking for strings.h... (cached) yes checking stdarg.h usability... yes checking stdarg.h presence... yes checking for stdarg.h... yes checking for sys/types.h... (cached) yes checking sys/socket.h usability... yes checking sys/socket.h presence... yes checking for sys/socket.h... yes checking sched.h usability... yes checking sched.h presence... yes checking for sched.h... yes checking for sys/stat.h... (cached) yes checking sys/param.h usability... yes checking sys/param.h presence... yes checking for sys/param.h... yes checking netinet/in.h usability... yes checking netinet/in.h presence... yes checking for netinet/in.h... yes checking netinet/tcp.h usability... yes checking netinet/tcp.h presence... yes checking for netinet/tcp.h... yes checking sys/un.h usability... yes checking sys/un.h presence... yes checking for sys/un.h... yes checking netdb.h usability... yes checking netdb.h presence... yes checking for netdb.h... yes checking sys/time.h usability... yes checking sys/time.h presence... yes checking for sys/time.h... yes checking time.h usability... yes checking time.h presence... yes checking for time.h... yes checking ifaddrs.h usability... yes checking ifaddrs.h presence... yes checking for ifaddrs.h... yes checking arpa/inet.h usability... yes checking arpa/inet.h presence... yes checking for arpa/inet.h... yes checking errno.h usability... yes checking errno.h presence... yes checking for errno.h... yes checking poll.h usability... yes checking poll.h presence... yes checking for poll.h... yes checking fcntl.h usability... yes checking fcntl.h presence... yes checking for fcntl.h... yes checking for netdb.h... (cached) yes checking winsock2.h usability... no checking winsock2.h presence... no checking for winsock2.h... no checking windows.h usability... no checking windows.h presence... no checking for windows.h... no checking for socket in -lsocket... no checking for gethostbyname in -lnsl... yes checking for gettimeofday... yes checking for time... yes checking for strdup... yes checking for sigaction... yes checking for signal... yes checking for usleep... yes checking for alloca... no checking for unsetenv... yes checking for strerror... yes checking for strsignal... yes checking for stat... yes checking for getifaddrs... yes checking for fcntl... yes checking for alarm... yes checking for isatty... yes checking for inet_ntop... yes checking for getpgid... yes checking for setsid... yes checking for environ in unistd.h... yes checking bootstrap server... user,ssh,rsh,fork,slurm,ll,lsf,sge,pbs,cobalt,manual,persist checking tm.h usability... no checking tm.h presence... no checking for tm.h... no checking for tm_init in -ltorque... no checking process manager... pmiserv checking user interface... mpich checking desired processor topology libraries... hwloc checking for pkg-config... /usr/bin/pkg-config checking pkg-config is at least version 0.9.0... yes ### ### Configuring hwloc core ### checking hwloc building mode... embedded configure: hwloc builddir: /global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/src/pm/hydra/tools/topo/hwloc/hwloc configure: hwloc srcdir: /global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/src/pm/hydra/tools/topo/hwloc/hwloc checking if want hwloc maintainer support... disabled (embedded mode) checking for hwloc directory prefix... tools/topo/hwloc/hwloc/ checking for hwloc symbol prefix... hwloc_ checking size of void *... 8 checking which OS support to include... Linux checking which CPU support to include... x86_64 checking size of unsigned long... (cached) 8 checking size of unsigned int... 4 checking for the C compiler vendor... gnu checking for __attribute__... yes checking for __attribute__(aligned)... yes checking for __attribute__(always_inline)... yes checking for __attribute__(cold)... yes checking for __attribute__(const)... yes checking for __attribute__(deprecated)... yes checking for __attribute__(format)... yes checking for __attribute__(hot)... yes checking for __attribute__(malloc)... yes checking for __attribute__(may_alias)... yes checking for __attribute__(no_instrument_function)... yes checking for __attribute__(nonnull)... yes checking for __attribute__(noreturn)... yes checking for __attribute__(packed)... yes checking for __attribute__(pure)... yes checking for __attribute__(sentinel)... yes checking for __attribute__(unused)... yes checking for __attribute__(warn_unused_result)... yes checking for __attribute__(weak_alias)... yes checking if cc supports -fvisibility=hidden... yes checking whether to enable symbol visibility... yes (via -fvisibility=hidden) checking whether the C compiler rejects function calls with too many arguments... yes checking whether the C compiler rejects function calls with too few arguments... yes checking for unistd.h... (cached) yes checking dirent.h usability... yes checking dirent.h presence... yes checking for dirent.h... yes checking for strings.h... (cached) yes checking for strncasecmp... yes checking whether function strncasecmp is declared... yes checking for strftime... yes checking for setlocale... yes checking for stdint.h... (cached) yes checking sys/mman.h usability... yes checking sys/mman.h presence... yes checking for sys/mman.h... yes checking for KAFFINITY... no checking for PROCESSOR_CACHE_TYPE... no checking for CACHE_DESCRIPTOR... no checking for LOGICAL_PROCESSOR_RELATIONSHIP... no checking for RelationProcessorPackage... no checking for SYSTEM_LOGICAL_PROCESSOR_INFORMATION... no checking for GROUP_AFFINITY... no checking for PROCESSOR_RELATIONSHIP... no checking for NUMA_NODE_RELATIONSHIP... no checking for CACHE_RELATIONSHIP... no checking for PROCESSOR_GROUP_INFO... no checking for GROUP_RELATIONSHIP... no checking for SYSTEM_LOGICAL_PROCESSOR_INFORMATION_EX... no checking for PSAPI_WORKING_SET_EX_BLOCK... no checking for PSAPI_WORKING_SET_EX_INFORMATION... no checking for main in -lgdi32... no checking for windows.h... (cached) no checking sys/lgrp_user.h usability... no checking sys/lgrp_user.h presence... no checking for sys/lgrp_user.h... no checking kstat.h usability... no checking kstat.h presence... no checking for kstat.h... no checking whether fabsf is declared... yes checking for fabsf in -lm... yes checking picl.h usability... no checking picl.h presence... no checking for picl.h... no checking whether _SC_NPROCESSORS_ONLN is declared... yes checking whether _SC_NPROCESSORS_CONF is declared... yes checking whether _SC_NPROC_ONLN is declared... no checking whether _SC_NPROC_CONF is declared... no checking whether _SC_PAGESIZE is declared... yes checking whether _SC_PAGE_SIZE is declared... yes checking whether _SC_LARGE_PAGESIZE is declared... no checking mach/mach_host.h usability... no checking mach/mach_host.h presence... no checking for mach/mach_host.h... no checking mach/mach_init.h usability... no checking mach/mach_init.h presence... no checking for mach/mach_init.h... no checking for sys/param.h... (cached) yes checking for sys/sysctl.h... yes checking whether CTL_HW is declared... no checking whether HW_NCPU is declared... no checking for sysctl... yes checking for sysctlbyname... no checking for pthread_t... yes checking whether function sched_setaffinity is declared... yes checking for old prototype of sched_setaffinity... no checking for working CPU_SET... yes checking for working CPU_SET_S... yes checking for working _syscall3... no checking for KERRIGHED... no checking for lib... no checking for bash... /bin/sh checking for ffs... yes checking whether function ffs is declared... yes checking for ffsl... yes checking whether function ffsl is declared... yes checking for fls... no checking for flsl... no checking for clz... no checking for clzl... no checking for openat... yes checking malloc.h usability... yes checking malloc.h presence... yes checking for malloc.h... yes checking for getpagesize... yes checking for memalign... yes checking for posix_memalign... yes checking sys/utsname.h usability... yes checking sys/utsname.h presence... yes checking for sys/utsname.h... yes checking for uname... yes checking pthread_np.h usability... no checking pthread_np.h presence... no checking for pthread_np.h... no checking whether pthread_setaffinity_np is declared... yes checking whether pthread_getaffinity_np is declared... yes checking for sched_setaffinity... yes checking for sys/cpuset.h... no checking for cpuset_setaffinity... no checking for library containing pthread_getthrds_np... no checking for cpuset_setid... no checking numaif.h usability... yes checking numaif.h presence... yes checking for numaif.h... yes checking for numa_available in -lnuma... no checking for PCIACCESS... yes checking for pci_slot_match_iterator_create... yes checking for final PCIACCESS support... yes checking CL/cl_ext.h usability... no checking CL/cl_ext.h presence... no checking for CL/cl_ext.h... no checking cuda.h usability... no checking cuda.h presence... no checking for cuda.h... no checking cuda_runtime_api.h usability... no checking cuda_runtime_api.h presence... no checking for cuda_runtime_api.h... no checking nvml.h usability... no checking nvml.h presence... no checking for nvml.h... no checking X11/Xlib.h usability... yes checking X11/Xlib.h presence... yes checking for X11/Xlib.h... yes checking for XOpenDisplay in -lX11... no checking NVCtrl/NVCtrl.h usability... no checking NVCtrl/NVCtrl.h presence... no checking for NVCtrl/NVCtrl.h... no checking for LIBXML2... yes checking for xmlNewDoc... yes checking for final LIBXML2 support... yes checking for cpuid... yes checking for pthread_mutex_lock... yes checking if plugin support is enabled... no checking components to build statically... noos xml synthetic custom xml_nolibxml linux pci xml_libxml x86 checking components to build as plugins... checking available processor topology libraries... hwloc checking pthread.h usability... yes checking pthread.h presence... yes checking for pthread.h... yes checking for pthread_key_create in -lpthread... yes checking checkpointing library... blcr checking libcr.h usability... no checking libcr.h presence... no checking for libcr.h... no checking for cr_init in -lcr... no checking demux engine... poll,select,port checking for poll... yes checking for select... yes checking debugging support... meminit checking error checking... yes checking warnings... no checking profiling... yes checking libftb.h usability... no checking libftb.h presence... no checking for libftb.h... no checking for FTB_Connect in -lftb... no checking for strsignal... (cached) yes checking whether strsignal needs a declaration... no checking for sigaction... (cached) yes checking for signal... (cached) yes checking for sigset... yes checking for struct sigaction and sa_handler... yes checking for gethostname... yes checking whether gethostname needs a declaration... no checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating tools/topo/hwloc/hwloc/Makefile config.status: creating tools/topo/hwloc/hwloc/include/Makefile config.status: creating tools/topo/hwloc/hwloc/src/Makefile config.status: creating Makefile config.status: creating tools/bootstrap/src/bsci_init.c config.status: creating hydra-doxygen.cfg config.status: creating include/hydra_config.h config.status: creating tools/topo/hwloc/hwloc/include/private/autogen/config.h config.status: creating tools/topo/hwloc/hwloc/include/hwloc/autogen/config.h config.status: executing depfiles commands config.status: executing libtool commands configure: ===== done with src/pm/hydra configure ===== checking size of OPA_ptr_t... 8 checking the sizeof MPI_Offset... 8 checking whether the Fortran Offset type works with Fortran 77... yes checking whether the Fortran Offset type works with Fortran 90... yes checking for size of MPI_Status... 40 checking for BSD/POSIX style global symbol lister... BSD style,/usr/bin/nm -g -B checking stdio.h usability... yes checking stdio.h presence... yes checking for stdio.h... yes checking for multiple __attribute__((alias)) support... yes checking the minimum alignment of Fortran common block of 1 integers... 16 checking the minimum alignment of Fortran common block of 10 integers... 32 configure: creating ./config.lt config.lt: creating libtool checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating src/binding/f90/mpif90model.h config.status: creating Makefile config.status: creating examples/Makefile config.status: creating test/Makefile config.status: creating test/commands/Makefile config.status: creating src/include/mpichinfo.h config.status: creating mpich-doxygen config.status: creating src/include/glue_romio.h config.status: creating src/include/mpichtimer.h config.status: creating src/binding/cxx/mpicxx.h config.status: creating src/binding/f77/mpif.h config.status: creating src/binding/f77/setbotf.f config.status: creating src/binding/f77/setbot.c config.status: creating src/binding/f90/mpi_sizeofs.f90 config.status: creating src/binding/f90/mpi_base.f90 config.status: creating src/packaging/pkgconfig/mpich.pc config.status: creating src/packaging/envmods/mpich.module config.status: creating src/env/mpixxx_opts.conf config.status: creating src/env/mpicc.sh config.status: creating src/env/mpicc.conf config.status: creating src/env/mpicc.bash config.status: creating src/env/mpicxx.sh config.status: creating src/env/mpicxx.conf config.status: creating src/env/mpicxx.bash config.status: creating src/env/mpif77.sh config.status: creating src/env/mpif77.conf config.status: creating src/env/mpif77.bash config.status: creating src/env/mpif90.sh config.status: creating src/env/mpif90.conf config.status: creating src/env/mpif90.bash config.status: creating src/env/parkill config.status: creating src/util/dbg/getfuncstack config.status: creating src/include/mpi.h config.status: creating doc/design/Makefile config.status: creating doc/installguide/Makefile config.status: creating doc/logging/Makefile config.status: creating doc/refman/Makefile config.status: creating doc/smpd/Makefile config.status: creating doc/userguide/Makefile config.status: creating doc/windev/Makefile config.status: creating test/commands/cmdtests config.status: creating src/include/mpichconf.h config.status: executing depfiles commands config.status: executing libtool commands config.status: executing default-1 commands config.status: executing default-2 commands config.status: executing default-3 commands config.status: executing default-4 commands config.status: executing default-5 commands === configuring in test/mpi (/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi) configure: running /bin/sh ./configure --disable-option-checking '--prefix=/global/homes/m/madams/petsc_maint/arch-xe6-opt64' 'CC=cc' 'CFLAGS= -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops ' 'CXX=CC' 'CXXFLAGS= -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -ffast-math -funroll-loops ' 'FC=ftn' 'FCFLAGS= -Wall -Wno-unused-variable -Wno-unused-dummy-argument -O3 -ffast-math -funroll-loops ' 'F77=ftn' 'FFLAGS= -Wall -Wno-unused-variable -Wno-unused-dummy-argument -O3 -ffast-math -funroll-loops ' '--enable-shared' '--enable-sharedlibs=gcc' '--with-device=ch3:sock' '--without-mpe' '--with-pm=hydra' '--enable-g=meminit' '--enable-fast' '--disable-checkerrors' --cache-file=/dev/null --srcdir=. RUNNING CONFIGURE FOR MPI TESTS checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... mkdir -p checking for gawk... gawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking whether to enable maintainer-specific portions of Makefiles... yes checking whether make supports nested variables... (cached) yes checking for make... make checking whether clock skew breaks make... no checking whether make supports include... yes checking whether make allows comments in actions... yes checking for virtual path format... VPATH checking whether make sets CFLAGS... yes checking for style of include used by make... GNU checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether cc accepts -g... yes checking for cc option to accept ISO C89... none needed checking dependency style of cc... gcc3 checking whether long double is supported... yes checking whether long long is supported... yes checking for an ANSI C-conforming const... yes checking for C/C++ restrict keyword... __restrict checking for ranlib... ranlib checking the archiver (ar) interface... ar checking for grep that handles long lines and -e... /usr/bin/grep checking for fgrep... /usr/bin/grep -F checking how to run the C preprocessor... cc -E checking for egrep... /usr/bin/grep -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking stdarg.h usability... yes checking stdarg.h presence... yes checking for stdarg.h... yes checking sys/time.h usability... yes checking sys/time.h presence... yes checking for sys/time.h... yes checking sys/resource.h usability... yes checking sys/resource.h presence... yes checking for sys/resource.h... yes checking for int8_t... yes checking for int16_t... yes checking for int32_t... yes checking for int64_t... yes checking for uint8_t... yes checking for uint16_t... yes checking for uint32_t... yes checking for uint64_t... yes checking for _Bool... yes checking for float _Complex... yes checking for double _Complex... yes checking for long double _Complex... yes checking pthread.h usability... yes checking pthread.h presence... yes checking for pthread.h... yes checking for library containing pthread_create... none required checking for library containing pthread_barrier_init... none required checking for pthread_create... yes checking for pthread_yield... yes checking for pthread_barrier_init... yes checking for pthread_barrier_wait... yes checking whether struct hostent contains h_addr_list... yes checking for getrusage... yes checking whether we are using the GNU Fortran 77 compiler... yes checking whether ftn accepts -g... yes checking whether integer*4 is supported... yes checking whether integer*8 is supported... yes checking whether integer*16 is supported... yes checking build system type... x86_64-unknown-linux-gnu checking host system type... x86_64-unknown-linux-gnu checking how to get verbose linking output from ftn... -v checking for Fortran 77 libraries of ftn... -L/opt/cray/papi/5.1.2/perf_events/no-cuda/lib -L/opt/cray/udreg/2.3.2-1.0402.7546.1.5.gem/lib64 -L/opt/cray/ugni/5.0-1.0402.7551.1.10.gem/lib64 -L/opt/cray/pmi/4.0.1-1.0000.9753.86.3.gem/lib64 -L/opt/cray/dmapp/4.0.1-1.0402.7784.4.1.gem/lib64 -L/opt/cray/xpmem/0.1-2.0402.45248.1.5.gem/lib64 -L/opt/cray/rca/1.0.0-2.0402.47290.7.1.gem/lib64 -L/usr/common/usg/darshan/2.2.6/lib -L/opt/cray/mpt/6.0.1/gni/mpich2-gnu/48/lib -L/opt/cray/mpt/6.0.1/gni/sma/lib64 -L/opt/cray/libsci/12.1.01/gnu/48/mc12/lib -L/opt/cray/hdf5/1.8.11/gnu/48/lib -L/opt/cray/netcdf/4.3.0/gnu/48/lib -L/opt/cray/xe-sysroot/4.2.34/usr/lib64 -L/opt/cray/xe-sysroot/4.2.34/lib64 -L/opt/cray/xe-sysroot/4.2.34/usr/lib/alps -L/usr/lib/alps -L/opt/gcc/4.8.1/snos/lib/gcc/x86_64-suse-linux/4.8.1 -L/opt/gcc/4.8.1/snos/lib/gcc/x86_64-suse-linux/4.8.1/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/opt/gcc/4.8.1/snos/lib/gcc/x86_64-suse-linux/4.8.1/../../.. -lpapi -lrca -L/opt/cray/atp/1.7.0/lib/ -lAtpSigHCommData -lAtpSigHandler -ldarshan-mpi-io -lz -lfmpich -lmpichcxx -ldarshan-posix -lnetcdff_gnu_48 -lnetcdf_gnu_48 -lhdf5hl_fortran_gnu -lhdf5_hl_gnu -lhdf5_fortran_gnu -lhdf5_gnu -ldl -lscicpp_gnu -lsci_gnu_mp -lstdc++ -lgfortran -lm -lmpichf90_gnu_48 -lmpich_gnu_48 -lmpl -lrt -lsma -lxpmem -ldmapp -lugni -lpmi -lalpslli -lalpsutil -ludreg -lpthread -lgomp -lquadmath checking for Fortran 77 name mangling... lower uscore checking whether ftn allows mismatched arguments... yes checking for Fortran libraries needed for getarg... none needed checking whether Fortran 77 supports Cray-style pointer... yes checking for Fortran 77 compiler flag for Cray-style pointer... -fcray-pointer checking whether we are using the GNU Fortran compiler... yes checking whether ftn accepts -g... yes checking for extension for Fortran 90 programs... f90 checking whether the Fortran 90 compiler (ftn -Wall -Wno-unused-variable -Wno-unused-dummy-argument -O3 -ffast-math -funroll-loops ) works... yes checking whether the Fortran 90 compiler (ftn -Wall -Wno-unused-variable -Wno-unused-dummy-argument -O3 -ffast-math -funroll-loops ) is a cross-compiler... no checking for Fortran flag needed to accept free-form source... none checking whether Fortran 90 supports Cray-style pointer... yes checking for Fortran 90 compiler flag for Cray-style pointer... -fcray-pointer checking whether ftn supports the Fortran 2003 routines to access the commandline... yes checking for Fortran 90 module extension... mod checking for Fortran 90 module include flag... -I checking for Fortran 90 module output directory flag... -J checking whether we are using the GNU C++ compiler... yes checking whether CC accepts -g... yes checking dependency style of CC... gcc3 checking whether available... yes checking whether the compiler implements namespaces... yes checking whether the compiler implements the namespace std... yes checking whether MPI_2DOUBLE_COMPLEX is available... no checking whether MPI_2COMPLEX is available... no checking size of void *... 8 checking size of int... 4 checking size of long... 8 checking size of long long... 8 checking size of short... 2 checking for C integer type of address size... long checking for perl... /usr/bin/perl checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating maint/testmerge config.status: creating runtests config.status: creating checktests config.status: creating Makefile config.status: creating basic/Makefile config.status: creating attr/Makefile config.status: creating util/Makefile config.status: creating coll/Makefile config.status: creating comm/Makefile config.status: creating datatype/Makefile config.status: creating errhan/Makefile config.status: creating group/Makefile config.status: creating info/Makefile config.status: creating init/Makefile config.status: creating pt2pt/Makefile config.status: creating mpi_t/Makefile config.status: creating rma/Makefile config.status: creating spawn/Makefile config.status: creating topo/Makefile config.status: creating io/Makefile config.status: creating f77/Makefile config.status: creating f77/attr/Makefile config.status: creating f77/attr/attraints.h config.status: creating f77/pt2pt/attr1aints.h config.status: creating f77/ext/add1size.h config.status: creating f77/datatype/Makefile config.status: creating f77/datatype/typeaints.h config.status: creating f77/util/Makefile config.status: creating f77/coll/Makefile config.status: creating f77/comm/Makefile config.status: creating f77/topo/Makefile config.status: creating f77/init/Makefile config.status: creating f77/rma/addsize.h config.status: creating f77/pt2pt/Makefile config.status: creating f77/info/Makefile config.status: creating f77/spawn/Makefile config.status: creating f77/spawn/testlist config.status: creating f77/spawn/type1aint.h config.status: creating f77/rma/Makefile config.status: creating f77/ext/Makefile config.status: creating f77/ext/testlist config.status: creating f77/io/Makefile config.status: creating f77/io/iooffset.h config.status: creating f77/io/iodisp.h config.status: creating f77/io/ioaint.h config.status: creating f90/Makefile config.status: creating f90/attr/Makefile config.status: creating f90/datatype/Makefile config.status: creating f90/f90types/Makefile config.status: creating f90/util/Makefile config.status: creating f90/coll/Makefile config.status: creating f90/comm/Makefile config.status: creating f90/topo/Makefile config.status: creating f90/init/Makefile config.status: creating f90/pt2pt/Makefile config.status: creating f90/rma/Makefile config.status: creating f90/info/Makefile config.status: creating f90/spawn/Makefile config.status: creating f90/spawn/testlist config.status: creating f90/timer/Makefile config.status: creating f90/ext/Makefile config.status: creating f90/ext/testlist config.status: creating f90/io/Makefile config.status: creating f90/misc/Makefile config.status: creating cxx/Makefile config.status: creating cxx/util/Makefile config.status: creating cxx/attr/Makefile config.status: creating cxx/pt2pt/Makefile config.status: creating cxx/comm/Makefile config.status: creating cxx/coll/Makefile config.status: creating cxx/errhan/Makefile config.status: creating cxx/info/Makefile config.status: creating cxx/datatype/Makefile config.status: creating cxx/io/Makefile config.status: creating cxx/init/Makefile config.status: creating cxx/rma/Makefile config.status: creating cxx/spawn/Makefile config.status: creating threads/Makefile config.status: creating threads/pt2pt/Makefile config.status: creating threads/util/Makefile config.status: creating threads/comm/Makefile config.status: creating threads/init/Makefile config.status: creating threads/spawn/Makefile config.status: creating errors/Makefile config.status: creating errors/attr/Makefile config.status: creating errors/basic/Makefile config.status: creating errors/coll/Makefile config.status: creating errors/comm/Makefile config.status: creating errors/datatype/Makefile config.status: creating errors/faults/Makefile config.status: creating errors/group/Makefile config.status: creating errors/pt2pt/Makefile config.status: creating errors/rma/Makefile config.status: creating errors/spawn/Makefile config.status: creating errors/topo/Makefile config.status: creating errors/io/Makefile config.status: creating errors/cxx/Makefile config.status: creating errors/cxx/errhan/Makefile config.status: creating errors/cxx/io/Makefile config.status: creating errors/f77/Makefile config.status: creating errors/f77/errhan/Makefile config.status: creating errors/f77/errhan/addsize.h config.status: creating errors/f77/errhan/iooffset.h config.status: creating errors/f90/Makefile config.status: creating errors/f90/errhan/Makefile config.status: creating manual/Makefile config.status: creating manual/manyconnect config.status: creating manual/mpi_t/Makefile config.status: creating perf/Makefile config.status: creating testlist config.status: creating cxx/testlist config.status: creating f77/testlist config.status: creating f90/testlist config.status: creating threads/testlist config.status: creating errors/testlist config.status: creating errors/cxx/testlist config.status: creating include/mpitestconf.h config.status: executing depfiles commands config.status: executing default-1 commands config.status: executing default-2 commands config.status: executing default-3 commands Configuration completed. =============================================================================== Running make on MPICH; this may take several minutes =============================================================================== sh: cd /global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106 && /usr/bin/make clean Executing: cd /global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106 && /usr/bin/make clean sh: Making clean in src/mpl make[1]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/src/mpl' rm -f strsep test -z "libmpl.la" || rm -f libmpl.la rm -f ./so_locations rm -rf .libs _libs rm -f *.o rm -f *.lo make[1]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/src/mpl' Making clean in src/openpa make[1]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/src/openpa' Making clean in src make[2]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/src/openpa/src' test -z "libopa.la" || rm -f libopa.la rm -f ./so_locations rm -rf .libs _libs rm -f *.o rm -f *.lo make[2]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/src/openpa/src' Making clean in test make[2]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/src/openpa/test' rm -f sanity test_primitives test_barriers test_queue rm -rf .libs _libs rm -f *.o rm -f *.lo make[2]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/src/openpa/test' make[2]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/src/openpa' rm -rf .libs _libs rm -f *.lo make[2]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/src/openpa' make[1]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/src/openpa' Making clean in src/mpi/romio make[1]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/src/mpi/romio' make[2]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/src/mpi/romio' rm -rf .libs _libs rm -rf adio/ad_bg/.libs adio/ad_bg/_libs rm -rf adio/ad_bgl/.libs adio/ad_bgl/_libs rm -rf adio/ad_bglockless/.libs adio/ad_bglockless/_libs rm -rf adio/ad_gridftp/.libs adio/ad_gridftp/_libs rm -rf adio/ad_hfs/.libs adio/ad_hfs/_libs rm -rf adio/ad_lustre/.libs adio/ad_lustre/_libs rm -rf adio/ad_nfs/.libs adio/ad_nfs/_libs rm -rf adio/ad_panfs/.libs adio/ad_panfs/_libs rm -rf adio/ad_pfs/.libs adio/ad_pfs/_libs rm -rf adio/ad_piofs/.libs adio/ad_piofs/_libs rm -rf adio/ad_pvfs/.libs adio/ad_pvfs/_libs rm -rf adio/ad_pvfs2/.libs adio/ad_pvfs2/_libs rm -rf adio/ad_sfs/.libs adio/ad_sfs/_libs rm -rf adio/ad_testfs/.libs adio/ad_testfs/_libs rm -rf adio/ad_ufs/.libs adio/ad_ufs/_libs rm -rf adio/ad_xfs/.libs adio/ad_xfs/_libs rm -rf adio/ad_zoidfs/.libs adio/ad_zoidfs/_libs rm -rf adio/common/.libs adio/common/_libs rm -rf mpi-io/.libs mpi-io/_libs rm -rf mpi-io/fortran/.libs mpi-io/fortran/_libs rm -rf mpi-io/glue/default/.libs mpi-io/glue/default/_libs rm -rf mpi-io/glue/mpich/.libs mpi-io/glue/mpich/_libs test -z "libromio.la " || rm -f libromio.la rm -f ./so_locations rm -f *.o rm -f adio/ad_bg/*.o rm -f adio/ad_bg/*.lo rm -f adio/ad_bgl/*.o rm -f adio/ad_bgl/*.lo rm -f adio/ad_bglockless/*.o rm -f adio/ad_bglockless/*.lo rm -f adio/ad_gridftp/*.o rm -f adio/ad_gridftp/*.lo rm -f adio/ad_hfs/*.o rm -f adio/ad_hfs/*.lo rm -f adio/ad_lustre/*.o rm -f adio/ad_lustre/*.lo rm -f adio/ad_nfs/*.o rm -f adio/ad_nfs/*.lo rm -f adio/ad_panfs/*.o rm -f adio/ad_panfs/*.lo rm -f adio/ad_pfs/*.o rm -f adio/ad_pfs/*.lo rm -f adio/ad_piofs/*.o rm -f adio/ad_piofs/*.lo rm -f adio/ad_pvfs/*.o rm -f adio/ad_pvfs/*.lo rm -f adio/ad_pvfs2/*.o rm -f adio/ad_pvfs2/*.lo rm -f adio/ad_sfs/*.o rm -f adio/ad_sfs/*.lo rm -f adio/ad_testfs/*.o rm -f adio/ad_testfs/*.lo rm -f adio/ad_ufs/*.o rm -f adio/ad_ufs/*.lo rm -f adio/ad_xfs/*.o rm -f adio/ad_xfs/*.lo rm -f adio/ad_zoidfs/*.o rm -f adio/ad_zoidfs/*.lo rm -f adio/common/*.o rm -f adio/common/*.lo rm -f mpi-io/*.o rm -f mpi-io/*.lo rm -f mpi-io/fortran/*.o rm -f mpi-io/fortran/*.lo rm -f mpi-io/glue/default/*.o rm -f mpi-io/glue/default/*.lo rm -f mpi-io/glue/mpich/*.o rm -f mpi-io/glue/mpich/*.lo rm -f *.lo make[2]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/src/mpi/romio' make[1]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/src/mpi/romio' Making clean in src/pm/hydra make[1]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/src/pm/hydra' Making clean in ../../mpl make[2]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/src/mpl' rm -f strsep test -z "libmpl.la" || rm -f libmpl.la rm -f ./so_locations rm -rf .libs _libs rm -f *.o rm -f *.lo make[2]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/src/mpl' Making clean in tools/topo/hwloc/hwloc make[2]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/src/pm/hydra/tools/topo/hwloc/hwloc' Making clean in src make[3]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/src/pm/hydra/tools/topo/hwloc/hwloc/src' test -z "" || rm -f test -z "" || rm -f rm -rf .libs _libs test -z "libhwloc_embedded.la" || rm -f libhwloc_embedded.la rm -f ./so_locations test -z " " || rm -f rm -f *.o rm -f *.lo make[3]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/src/pm/hydra/tools/topo/hwloc/hwloc/src' Making clean in include make[3]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/src/pm/hydra/tools/topo/hwloc/hwloc/include' rm -rf .libs _libs rm -f *.lo make[3]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/src/pm/hydra/tools/topo/hwloc/hwloc/include' make[3]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/src/pm/hydra/tools/topo/hwloc/hwloc' rm -rf .libs _libs rm -f *.lo make[3]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/src/pm/hydra/tools/topo/hwloc/hwloc' make[2]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/src/pm/hydra/tools/topo/hwloc/hwloc' Making clean in . make[2]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/src/pm/hydra' rm -f hydra_persist hydra_nameserver hydra_pmi_proxy mpiexec.hydra rm -rf .libs _libs test -z "libhydra.la libpm.la" || rm -f libhydra.la libpm.la rm -f ./so_locations rm -f *.o rm -f *.lo make[2]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/src/pm/hydra' make[1]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/src/pm/hydra' Making clean in . make[1]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106' rm -f src/env/mpichversion test -z "src/binding/f90/mpi.mod-stamp src/binding/f90/mpi.mod src/binding/f90/mpi.lo src/binding/f90/mpi-tmp src/binding/f90/mpi_constants.mod-stamp src/binding/f90/mpi_constants.mod src/binding/f90/mpi_constants.lo src/binding/f90/mpi_constants-tmp src/binding/f90/mpi_sizeofs.mod-stamp src/binding/f90/mpi_sizeofs.mod src/binding/f90/mpi_sizeofs.lo src/binding/f90/mpi_sizeofs-tmp src/binding/f90/mpi_base.mod-stamp src/binding/f90/mpi_base.mod src/binding/f90/mpi_base.lo src/binding/f90/mpi_base-tmp src/binding/f90/mpifnoext.h src/binding/f90/mpi.mod src/binding/f90/mpi_sizeofs.mod src/binding/f90/mpi_constants.mod src/binding/f90/mpi_base.mod" || rm -f src/binding/f90/mpi.mod-stamp src/binding/f90/mpi.mod src/binding/f90/mpi.lo src/binding/f90/mpi-tmp src/binding/f90/mpi_constants.mod-stamp src/binding/f90/mpi_constants.mod src/binding/f90/mpi_constants.lo src/binding/f90/mpi_constants-tmp src/binding/f90/mpi_sizeofs.mod-stamp src/binding/f90/mpi_sizeofs.mod src/binding/f90/mpi_sizeofs.lo src/binding/f90/mpi_sizeofs-tmp src/binding/f90/mpi_base.mod-stamp src/binding/f90/mpi_base.mod src/binding/f90/mpi_base.lo src/binding/f90/mpi_base-tmp src/binding/f90/mpifnoext.h src/binding/f90/mpi.mod src/binding/f90/mpi_sizeofs.mod src/binding/f90/mpi_constants.mod src/binding/f90/mpi_base.mod test -z "lib/libmpich.la lib/libmpichcxx.la lib/libfmpich.la lib/libmpichf90.la" || rm -f lib/libmpich.la lib/libmpichcxx.la lib/libfmpich.la lib/libmpichf90.la rm -f lib/so_locations rm -rf .libs _libs rm -rf lib/.libs lib/_libs rm -rf src/binding/cxx/.libs src/binding/cxx/_libs rm -rf src/binding/f77/.libs src/binding/f77/_libs rm -rf src/binding/f90/.libs src/binding/f90/_libs rm -rf src/env/.libs src/env/_libs rm -rf src/glue/romio/.libs src/glue/romio/_libs rm -rf src/mpi/attr/.libs src/mpi/attr/_libs rm -rf src/mpi/coll/.libs src/mpi/coll/_libs rm -rf src/mpi/comm/.libs src/mpi/comm/_libs rm -rf src/mpi/datatype/.libs src/mpi/datatype/_libs rm -rf src/mpi/debugger/.libs src/mpi/debugger/_libs rm -rf src/mpi/errhan/.libs src/mpi/errhan/_libs rm -rf src/mpi/group/.libs src/mpi/group/_libs rm -rf src/mpi/info/.libs src/mpi/info/_libs rm -rf src/mpi/init/.libs src/mpi/init/_libs rm -rf src/mpi/misc/.libs src/mpi/misc/_libs rm -rf src/mpi/pt2pt/.libs src/mpi/pt2pt/_libs rm -rf src/mpi/rma/.libs src/mpi/rma/_libs rm -rf src/mpi/spawn/.libs src/mpi/spawn/_libs rm -rf src/mpi/timer/.libs src/mpi/timer/_libs rm -rf src/mpi/topo/.libs src/mpi/topo/_libs rm -rf src/mpi_t/.libs src/mpi_t/_libs rm -rf src/mpid/ch3/channels/nemesis/netmod/mx/.libs src/mpid/ch3/channels/nemesis/netmod/mx/_libs rm -rf src/mpid/ch3/channels/nemesis/netmod/newmad/.libs src/mpid/ch3/channels/nemesis/netmod/newmad/_libs rm -rf src/mpid/ch3/channels/nemesis/netmod/none/.libs src/mpid/ch3/channels/nemesis/netmod/none/_libs rm -rf src/mpid/ch3/channels/nemesis/netmod/portals4/.libs src/mpid/ch3/channels/nemesis/netmod/portals4/_libs rm -rf src/mpid/ch3/channels/nemesis/netmod/scif/.libs src/mpid/ch3/channels/nemesis/netmod/scif/_libs rm -rf src/mpid/ch3/channels/nemesis/netmod/tcp/.libs src/mpid/ch3/channels/nemesis/netmod/tcp/_libs rm -rf src/mpid/ch3/channels/nemesis/src/.libs src/mpid/ch3/channels/nemesis/src/_libs rm -rf src/mpid/ch3/channels/nemesis/utils/monitor/.libs src/mpid/ch3/channels/nemesis/utils/monitor/_libs rm -rf src/mpid/ch3/channels/nemesis/utils/replacements/.libs src/mpid/ch3/channels/nemesis/utils/replacements/_libs rm -rf src/mpid/ch3/channels/sock/src/.libs src/mpid/ch3/channels/sock/src/_libs rm -rf src/mpid/ch3/src/.libs src/mpid/ch3/src/_libs rm -rf src/mpid/ch3/util/ftb/.libs src/mpid/ch3/util/ftb/_libs rm -rf src/mpid/ch3/util/sock/.libs src/mpid/ch3/util/sock/_libs rm -rf src/mpid/common/datatype/.libs src/mpid/common/datatype/_libs rm -rf src/mpid/common/datatype/dataloop/.libs src/mpid/common/datatype/dataloop/_libs rm -rf src/mpid/common/sched/.libs src/mpid/common/sched/_libs rm -rf src/mpid/common/sock/poll/.libs src/mpid/common/sock/poll/_libs rm -rf src/mpid/common/thread/.libs src/mpid/common/thread/_libs rm -rf src/mpid/pamid/src/.libs src/mpid/pamid/src/_libs rm -rf src/mpid/pamid/src/coll/.libs src/mpid/pamid/src/coll/_libs rm -rf src/mpid/pamid/src/coll/allgather/.libs src/mpid/pamid/src/coll/allgather/_libs rm -rf src/mpid/pamid/src/coll/allgatherv/.libs src/mpid/pamid/src/coll/allgatherv/_libs rm -rf src/mpid/pamid/src/coll/allreduce/.libs src/mpid/pamid/src/coll/allreduce/_libs rm -rf src/mpid/pamid/src/coll/alltoall/.libs src/mpid/pamid/src/coll/alltoall/_libs rm -rf src/mpid/pamid/src/coll/alltoallv/.libs src/mpid/pamid/src/coll/alltoallv/_libs rm -rf src/mpid/pamid/src/coll/barrier/.libs src/mpid/pamid/src/coll/barrier/_libs rm -rf src/mpid/pamid/src/coll/bcast/.libs src/mpid/pamid/src/coll/bcast/_libs rm -rf src/mpid/pamid/src/coll/gather/.libs src/mpid/pamid/src/coll/gather/_libs rm -rf src/mpid/pamid/src/coll/gatherv/.libs src/mpid/pamid/src/coll/gatherv/_libs rm -rf src/mpid/pamid/src/coll/reduce/.libs src/mpid/pamid/src/coll/reduce/_libs rm -rf src/mpid/pamid/src/coll/scan/.libs src/mpid/pamid/src/coll/scan/_libs rm -rf src/mpid/pamid/src/coll/scatter/.libs src/mpid/pamid/src/coll/scatter/_libs rm -rf src/mpid/pamid/src/coll/scatterv/.libs src/mpid/pamid/src/coll/scatterv/_libs rm -rf src/mpid/pamid/src/comm/.libs src/mpid/pamid/src/comm/_libs rm -rf src/mpid/pamid/src/dyntask/.libs src/mpid/pamid/src/dyntask/_libs rm -rf src/mpid/pamid/src/misc/.libs src/mpid/pamid/src/misc/_libs rm -rf src/mpid/pamid/src/mpix/.libs src/mpid/pamid/src/mpix/_libs rm -rf src/mpid/pamid/src/onesided/.libs src/mpid/pamid/src/onesided/_libs rm -rf src/mpid/pamid/src/pamix/.libs src/mpid/pamid/src/pamix/_libs rm -rf src/mpid/pamid/src/pt2pt/.libs src/mpid/pamid/src/pt2pt/_libs rm -rf src/mpid/pamid/src/pt2pt/persistent/.libs src/mpid/pamid/src/pt2pt/persistent/_libs rm -rf src/mutex/.libs src/mutex/_libs rm -rf src/nameserv/file/.libs src/nameserv/file/_libs rm -rf src/nameserv/mpd/.libs src/nameserv/mpd/_libs rm -rf src/nameserv/pmi/.libs src/nameserv/pmi/_libs rm -rf src/pm/gforker/.libs src/pm/gforker/_libs rm -rf src/pm/remshell/.libs src/pm/remshell/_libs rm -rf src/pm/smpd/.libs src/pm/smpd/_libs rm -rf src/pm/smpd/sock/poll/.libs src/pm/smpd/sock/poll/_libs rm -rf src/pmi/pmi2/poe/.libs src/pmi/pmi2/poe/_libs rm -rf src/pmi/pmi2/simple/.libs src/pmi/pmi2/simple/_libs rm -rf src/pmi/simple/.libs src/pmi/simple/_libs rm -rf src/pmi/smpd/.libs src/pmi/smpd/_libs rm -rf src/util/dbg/.libs src/util/dbg/_libs rm -rf src/util/instrm/.libs src/util/instrm/_libs rm -rf src/util/logging/rlog/.libs src/util/logging/rlog/_libs rm -rf src/util/mem/.libs src/util/mem/_libs rm -rf src/util/msgs/.libs src/util/msgs/_libs rm -rf src/util/other/.libs src/util/other/_libs rm -rf src/util/param/.libs src/util/param/_libs rm -rf src/util/procmap/.libs src/util/procmap/_libs rm -rf src/util/thread/.libs src/util/thread/_libs ( cd test && make clean ) make[2]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test' Making clean in mpi make[3]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi' Making clean in util make[4]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/util' rm -f *.o make[4]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/util' Making clean in attr make[4]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/attr' test -z "summary.xml summary.tap" || rm -f summary.xml summary.tap test -z "attrt attrend attrend2 attric attrerr attrerrcomm attrerrtype attr2type attrorder attrordercomm attrordertype baseattr2 baseattrcomm fkeyval fkeyvalcomm fkeyvaltype keyval_double_free" || rm -f attrt attrend attrend2 attric attrerr attrerrcomm attrerrtype attr2type attrorder attrordercomm attrordertype baseattr2 baseattrcomm fkeyval fkeyvalcomm fkeyvaltype keyval_double_free rm -f *.o make[4]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/attr' Making clean in basic make[4]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/basic' test -z "summary.xml summary.tap" || rm -f summary.xml summary.tap test -z "self simple sendrecv srtest wtime netpipe patterns adapt" || rm -f self simple sendrecv srtest wtime netpipe patterns adapt rm -f *.o make[4]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/basic' Making clean in datatype make[4]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/datatype' test -z "summary.xml summary.tap" || rm -f summary.xml summary.tap test -z "blockindexed-misc blockindexed-zero-count contents contig-zero-count contigstruct cxx-types darray-pack darray-cyclic gaddress get-elements get-elements-pairtype getpartelm hindexed-zeros hindexed_block hindexed_block_contents indexed-misc large-count lbub localpack longdouble lots-of-types pairtype-pack pairtype-size-extent simple-commit simple-pack simple-pack-external simple-resized simple-size-extent sizedtypes slice-pack slice-pack-external struct-derived-zeros struct-empty-el struct-ezhov struct-no-real-types struct-pack struct-verydeep struct-zero-count subarray subarray-pack tfree tmatchsize transpose-pack tresized tresized2 triangular-pack typecommit typefree typelb typename unpack unusual-noncontigs zeroblks zeroparms" || rm -f blockindexed-misc blockindexed-zero-count contents contig-zero-count contigstruct cxx-types darray-pack darray-cyclic gaddress get-elements get-elements-pairtype getpartelm hindexed-zeros hindexed_block hindexed_block_contents indexed-misc large-count lbub localpack longdouble lots-of-types pairtype-pack pairtype-size-extent simple-commit simple-pack simple-pack-external simple-resized simple-size-extent sizedtypes slice-pack slice-pack-external struct-derived-zeros struct-empty-el struct-ezhov struct-no-real-types struct-pack struct-verydeep struct-zero-count subarray subarray-pack tfree tmatchsize transpose-pack tresized tresized2 triangular-pack typecommit typefree typelb typename unpack unusual-noncontigs zeroblks zeroparms rm -f *.o make[4]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/datatype' Making clean in coll make[4]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/coll' test -z "summary.xml summary.tap" || rm -f summary.xml summary.tap test -z "allgather2 allgather3 allgatherv2 allgatherv3 allgatherv4 allred allred2 allred3 allred4 allred5 allred6 allredmany alltoall1 alltoallv alltoallv0 alltoallw1 alltoallw2 alltoallw_zeros bcast2 bcast3 bcasttest bcastzerotype coll2 coll3 coll4 coll5 coll6 coll7 coll8 coll9 coll10 coll11 coll12 coll13 exscan exscan2 gather gather2 iallred ibarrier icallgather icallgatherv icallreduce icalltoall icalltoallv icalltoallw icbarrier icbcast icgather icgatherv icreduce icscatter icscatterv longuser nonblocking nonblocking2 nonblocking3 op_commutative opband opbor opbxor opland oplor oplxor opmax opmaxloc opmin opminloc opprod opsum red3 red4 red_scat_block red_scat_block2 redscat redscat2 redscat3 redscatblk3 redscatinter redscatbkinter reduce reduce_local scantst scatter2 scatter3 scattern scatterv uoplong nballtoall1 nbredscat nbredscat3 nbredscatinter nbcoll2" || rm -f allgather2 allgather3 allgatherv2 allgatherv3 allgatherv4 allred allred2 allred3 allred4 allred5 allred6 allredmany alltoall1 alltoallv alltoallv0 alltoallw1 alltoallw2 alltoallw_zeros bcast2 bcast3 bcasttest bcastzerotype coll2 coll3 coll4 coll5 coll6 coll7 coll8 coll9 coll10 coll11 coll12 coll13 exscan exscan2 gather gather2 iallred ibarrier icallgather icallgatherv icallreduce icalltoall icalltoallv icalltoallw icbarrier icbcast icgather icgatherv icreduce icscatter icscatterv longuser nonblocking nonblocking2 nonblocking3 op_commutative opband opbor opbxor opland oplor oplxor opmax opmaxloc opmin opminloc opprod opsum red3 red4 red_scat_block red_scat_block2 redscat redscat2 redscat3 redscatblk3 redscatinter redscatbkinter reduce reduce_local scantst scatter2 scatter3 scattern scatterv uoplong nballtoall1 nbredscat nbredscat3 nbredscatinter nbcoll2 rm -f *.o make[4]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/coll' Making clean in comm make[4]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/comm' test -z "summary.xml summary.tap" || rm -f summary.xml summary.tap test -z "commcreate1 dup dupic dup_with_info ic1 ic2 commname ctxalloc ctxsplit icgroup icsplit iccreate cmfree icm cmsplit cmsplit2 cmsplit_type comm_create_group comm_group_half comm_group_rand probe-intercomm comm_idup comm_info" || rm -f commcreate1 dup dupic dup_with_info ic1 ic2 commname ctxalloc ctxsplit icgroup icsplit iccreate cmfree icm cmsplit cmsplit2 cmsplit_type comm_create_group comm_group_half comm_group_rand probe-intercomm comm_idup comm_info rm -f *.o make[4]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/comm' Making clean in errhan make[4]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/errhan' test -z "summary.xml summary.tap" || rm -f summary.xml summary.tap test -z "adderr commcall errfatal predef_eh" || rm -f adderr commcall errfatal predef_eh rm -f *.o make[4]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/errhan' Making clean in group make[4]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/group' test -z "summary.xml summary.tap" || rm -f summary.xml summary.tap test -z "grouptest grouptest2 groupcreate gtranks groupnullincl gtranksperf" || rm -f grouptest grouptest2 groupcreate gtranks groupnullincl gtranksperf rm -f *.o make[4]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/group' Making clean in info make[4]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/info' test -z "summary.xml summary.tap" || rm -f summary.xml summary.tap test -z "infodup infodel infovallen infoorder infomany infomany2 infotest infoenv" || rm -f infodup infodel infovallen infoorder infomany infomany2 infotest infoenv rm -f *.o make[4]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/info' Making clean in init make[4]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/init' test -z "summary.xml summary.tap" || rm -f summary.xml summary.tap test -z "attrself exitst1 exitst2 exitst3 initstat version library_version timeout finalized" || rm -f attrself exitst1 exitst2 exitst3 initstat version library_version timeout finalized rm -f *.o make[4]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/init' Making clean in pt2pt make[4]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/pt2pt' test -z "summary.xml summary.tap" || rm -f summary.xml summary.tap test -z "anyall bottom bsend1 bsend2 bsend3 bsend4 bsend5 bsendalign cancelrecv isendself sendself eagerdt isendselfprobe bsendfrag bsendpending icsend rqstatus rqfreeb greq1 scancel scancel2 rcancel pscancel sendflood sendrecv1 sendrecv2 sendrecv3 waitany-null pingping probe-unexp probenull inactivereq waittestnull sendall large_message mprobe" || rm -f anyall bottom bsend1 bsend2 bsend3 bsend4 bsend5 bsendalign cancelrecv isendself sendself eagerdt isendselfprobe bsendfrag bsendpending icsend rqstatus rqfreeb greq1 scancel scancel2 rcancel pscancel sendflood sendrecv1 sendrecv2 sendrecv3 waitany-null pingping probe-unexp probenull inactivereq waittestnull sendall large_message mprobe rm -f *.o make[4]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/pt2pt' Making clean in rma make[4]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/rma' test -z "summary.xml summary.tap" || rm -f summary.xml summary.tap test -z "allocmem ircpi test1 test2 test3 test4 test5 lockcontention lockcontention2 lockcontention3 lockopts contention_put contention_putget put_base put_bottom locknull wintest transpose1 transpose2 transpose3 transpose4 transpose5 transpose6 transpose7 fetchandadd fetchandadd_tree winname putfence1 putfidx epochtest getfence1 accfence1 accfence2 adlb_mimic1 putpscw1 accpscw1 getgroup contig_displ test1_am test2_am test3_am test4_am test5_am fetchandadd_am fetchandadd_tree_am accfence2_am test1_dt attrorderwin wincall fkeyvalwin baseattrwin nullpscw rmanull rmazero mixedsync manyrma2 selfrma strided_acc_onelock strided_putget_indexed strided_putget_indexed_shared strided_acc_indexed strided_acc_subarray strided_get_indexed strided_getacc_indexed strided_getacc_indexed_shared window_creation win_flavors win_shared win_shared_noncontig win_shared_noncontig_put win_dynamic_acc get_acc_local compare_and_swap linked_list linked_list_fop linked_list_lockall linked_list_bench_lock_all linked_list_bench_lock_excl linked_list_bench_lock_shr linked_list_bench_lock_shr_nocheck fetch_and_op_char fetch_and_op_short fetch_and_op_int fetch_and_op_long fetch_and_op_double fetch_and_op_long_double get_accumulate_short get_accumulate_long get_accumulate_double get_accumulate_int get_accumulate_short_derived get_accumulate_long_derived get_accumulate_double_derived get_accumulate_int_derived flush reqops req_example win_info pscw_ordering mutex_bench mutex_bench_shared" || rm -f allocmem ircpi test1 test2 test3 test4 test5 lockcontention lockcontention2 lockcontention3 lockopts contention_put contention_putget put_base put_bottom locknull wintest transpose1 transpose2 transpose3 transpose4 transpose5 transpose6 transpose7 fetchandadd fetchandadd_tree winname putfence1 putfidx epochtest getfence1 accfence1 accfence2 adlb_mimic1 putpscw1 accpscw1 getgroup contig_displ test1_am test2_am test3_am test4_am test5_am fetchandadd_am fetchandadd_tree_am accfence2_am test1_dt attrorderwin wincall fkeyvalwin baseattrwin nullpscw rmanull rmazero mixedsync manyrma2 selfrma strided_acc_onelock strided_putget_indexed strided_putget_indexed_shared strided_acc_indexed strided_acc_subarray strided_get_indexed strided_getacc_indexed strided_getacc_indexed_shared window_creation win_flavors win_shared win_shared_noncontig win_shared_noncontig_put win_dynamic_acc get_acc_local compare_and_swap linked_list linked_list_fop linked_list_lockall linked_list_bench_lock_all linked_list_bench_lock_excl linked_list_bench_lock_shr linked_list_bench_lock_shr_nocheck fetch_and_op_char fetch_and_op_short fetch_and_op_int fetch_and_op_long fetch_and_op_double fetch_and_op_long_double get_accumulate_short get_accumulate_long get_accumulate_double get_accumulate_int get_accumulate_short_derived get_accumulate_long_derived get_accumulate_double_derived get_accumulate_int_derived flush reqops req_example win_info pscw_ordering mutex_bench mutex_bench_shared rm -f *.o make[4]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/rma' Making clean in topo make[4]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/topo' test -z "summary.xml summary.tap" || rm -f summary.xml summary.tap test -z "cartmap1 cartzero cartshift1 cartsuball cartcreates dims1 dims2 graphmap1 topotest topodup graphcr graphcr2 distgraph1 dgraph_unwgt neighb_coll" || rm -f cartmap1 cartzero cartshift1 cartsuball cartcreates dims1 dims2 graphmap1 topotest topodup graphcr graphcr2 distgraph1 dgraph_unwgt neighb_coll rm -f *.o make[4]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/topo' Making clean in errors make[4]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/errors' Making clean in attr make[5]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/errors/attr' test -z "summary.xml summary.tap" || rm -f summary.xml summary.tap test -z "keyvalmis" || rm -f keyvalmis rm -f *.o make[5]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/errors/attr' Making clean in coll make[5]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/errors/coll' test -z "summary.xml summary.tap" || rm -f summary.xml summary.tap test -z "noalias rerr bcastlength reduce_local" || rm -f noalias rerr bcastlength reduce_local rm -f *.o make[5]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/errors/coll' Making clean in comm make[5]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/errors/comm' test -z "summary.xml summary.tap" || rm -f summary.xml summary.tap test -z "cfree ccreate1 manysplit userdup too_many_comms too_many_comms2 too_many_comms3" || rm -f cfree ccreate1 manysplit userdup too_many_comms too_many_comms2 too_many_comms3 rm -f *.o make[5]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/errors/comm' Making clean in datatype make[5]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/errors/datatype' test -z "summary.xml summary.tap" || rm -f summary.xml summary.tap test -z "getcnterr" || rm -f getcnterr rm -f *.o make[5]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/errors/datatype' Making clean in group make[5]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/errors/group' test -z "summary.xml summary.tap" || rm -f summary.xml summary.tap test -z "gerr" || rm -f gerr rm -f *.o make[5]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/errors/group' Making clean in pt2pt make[5]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/errors/pt2pt' test -z "summary.xml summary.tap" || rm -f summary.xml summary.tap test -z "proberank truncmsg1 truncmsg2 errinstatts errinstatta errinstatws errinstatwa" || rm -f proberank truncmsg1 truncmsg2 errinstatts errinstatta errinstatws errinstatwa rm -f *.o make[5]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/errors/pt2pt' Making clean in rma make[5]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/errors/rma' test -z "summary.xml summary.tap" || rm -f summary.xml summary.tap test -z "winerr winerr2 cas_type_check win_sync_unlock win_sync_free_pt win_sync_free_at win_sync_complete win_sync_lock_at win_sync_lock_pt win_sync_lock_fence win_sync_nested win_sync_op" || rm -f winerr winerr2 cas_type_check win_sync_unlock win_sync_free_pt win_sync_free_at win_sync_complete win_sync_lock_at win_sync_lock_pt win_sync_lock_fence win_sync_nested win_sync_op rm -f *.o make[5]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/errors/rma' Making clean in topo make[5]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/errors/topo' test -z "summary.xml summary.tap" || rm -f summary.xml summary.tap test -z "cartsmall" || rm -f cartsmall rm -f *.o make[5]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/errors/topo' Making clean in basic make[5]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/errors/basic' test -z "summary.xml summary.tap" || rm -f summary.xml summary.tap test -z "lefthandles debabort" || rm -f lefthandles debabort rm -f *.o make[5]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/errors/basic' Making clean in faults make[5]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/errors/faults' test -z "summary.xml summary.tap" || rm -f summary.xml summary.tap test -z "pt2ptf1 pt2ptf2 collf1 collf2" || rm -f pt2ptf1 pt2ptf2 collf1 collf2 rm -f *.o make[5]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/errors/faults' Making clean in io make[5]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/errors/io' test -z "summary.xml summary.tap" || rm -f summary.xml summary.tap test -z "fileerrret openerr" || rm -f fileerrret openerr rm -f *.o make[5]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/errors/io' Making clean in f77 make[5]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/errors/f77' Making clean in errhan make[6]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/errors/f77/errhan' test -z "summary.xml summary.tap" || rm -f summary.xml summary.tap test -z "uerrhandf" || rm -f uerrhandf rm -f *.o make[6]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/errors/f77/errhan' make[6]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/errors/f77' test -z "summary.xml summary.tap" || rm -f summary.xml summary.tap make[6]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/errors/f77' make[5]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/errors/f77' Making clean in f90 make[5]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/errors/f90' Making clean in errhan make[6]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/errors/f90/errhan' test -z "summary.xml summary.tap" || rm -f summary.xml summary.tap test -z "uerrhandf90" || rm -f uerrhandf90 rm -f *.o make[6]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/errors/f90/errhan' make[6]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/errors/f90' test -z "summary.xml summary.tap" || rm -f summary.xml summary.tap make[6]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/errors/f90' make[5]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/errors/f90' Making clean in cxx make[5]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/errors/cxx' Making clean in io make[6]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/errors/cxx/io' test -z "summary.xml summary.tap" || rm -f summary.xml summary.tap test -z "fileerrretx errgetfilex throwtestfilex" || rm -f fileerrretx errgetfilex throwtestfilex rm -f *.o make[6]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/errors/cxx/io' Making clean in errhan make[6]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/errors/cxx/errhan' test -z "summary.xml summary.tap" || rm -f summary.xml summary.tap test -z "commerrx errgetx errsetx throwtest" || rm -f commerrx errgetx errsetx throwtest rm -f *.o make[6]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/errors/cxx/errhan' make[6]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/errors/cxx' test -z "summary.xml summary.tap" || rm -f summary.xml summary.tap make[6]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/errors/cxx' make[5]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/errors/cxx' Making clean in spawn make[5]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/errors/spawn' test -z "summary.xml summary.tap" || rm -f summary.xml summary.tap test -z "badport unpub lookup_name" || rm -f badport unpub lookup_name rm -f *.o make[5]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/errors/spawn' make[5]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/errors' test -z "summary.xml summary.tap" || rm -f summary.xml summary.tap make[5]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/errors' make[4]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/errors' Making clean in manual make[4]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/manual' Making clean in mpi_t make[5]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/manual/mpi_t' test -z "summary.xml summary.tap" || rm -f summary.xml summary.tap test -z "mpit_test mpit_test2 nem_fbox_fallback_to_queue_count unexpected_recvq_buffer_size" || rm -f mpit_test mpit_test2 nem_fbox_fallback_to_queue_count unexpected_recvq_buffer_size rm -f *.o make[5]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/manual/mpi_t' make[5]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/manual' test -z "summary.xml summary.tap test-port" || rm -f summary.xml summary.tap test-port test -z "singjoin testconnect testconnectserial dimsbalanced spawntest_master spawntest_child segfault" || rm -f singjoin testconnect testconnectserial dimsbalanced spawntest_master spawntest_child segfault rm -f *.o make[5]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/manual' make[4]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/manual' Making clean in perf make[4]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/perf' test -z "summary.xml summary.tap" || rm -f summary.xml summary.tap test -z "transp-datatype non_zero_root sendrecvl twovec dtpack allredtrace commcreatep allredtrace commcreatep timer manyrma nestvec nestvec2 indexperf" || rm -f transp-datatype non_zero_root sendrecvl twovec dtpack allredtrace commcreatep allredtrace commcreatep timer manyrma nestvec nestvec2 indexperf rm -f *.o make[4]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/perf' Making clean in mpi_t make[4]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/mpi_t' test -z "summary.xml summary.tap" || rm -f summary.xml summary.tap test -z "mpi_t_str" || rm -f mpi_t_str rm -f *.o make[4]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/mpi_t' Making clean in io make[4]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/io' test -z "summary.xml summary.tap" || rm -f summary.xml summary.tap rm -f testfile testfile.* test -z "rdwrord rdwrzero getextent setinfo setviewcur i_noncontig async async_any userioerr resized" || rm -f rdwrord rdwrzero getextent setinfo setviewcur i_noncontig async async_any userioerr resized rm -f *.o make[4]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/io' Making clean in f77 make[4]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/f77' Making clean in util make[5]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/f77/util' rm -f *.o make[5]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/f77/util' Making clean in attr make[5]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/f77/attr' test -z "summary.xml summary.tap" || rm -f summary.xml summary.tap test -z "attrmpi1f baseattrf baseattr2f commattrf commattr2f commattr3f typeattrf typeattr2f typeattr3f" || rm -f attrmpi1f baseattrf baseattr2f commattrf commattr2f commattr3f typeattrf typeattr2f typeattr3f rm -f *.o make[5]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/f77/attr' Making clean in datatype make[5]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/f77/datatype' test -z "summary.xml summary.tap" || rm -f summary.xml summary.tap test -z "typenamef typesnamef typecntsf typesubf typem2f gaddressf packef allctypesf hindex1f hindexed_blockf typename3f" || rm -f typenamef typesnamef typecntsf typesubf typem2f gaddressf packef allctypesf hindex1f hindexed_blockf typename3f rm -f *.o make[5]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/f77/datatype' Making clean in coll make[5]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/f77/coll' test -z "summary.xml summary.tap" || rm -f summary.xml summary.tap test -z "uallreducef exscanf alltoallwf inplacef allredint8f allredopttf reducelocalf alltoallvf redscatf split_typef nonblockingf vw_inplacef red_scat_blockf nonblocking_inpf" || rm -f uallreducef exscanf alltoallwf inplacef allredint8f allredopttf reducelocalf alltoallvf redscatf split_typef nonblockingf vw_inplacef red_scat_blockf nonblocking_inpf rm -f *.o make[5]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/f77/coll' Making clean in pt2pt make[5]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/f77/pt2pt' test -z "summary.xml summary.tap" || rm -f summary.xml summary.tap test -z "allpairf statusesf greqf mprobef" || rm -f allpairf statusesf greqf mprobef rm -f *.o make[5]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/f77/pt2pt' Making clean in info make[5]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/f77/info' test -z "summary.xml summary.tap" || rm -f summary.xml summary.tap test -z "infotestf infotest2f" || rm -f infotestf infotest2f rm -f *.o make[5]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/f77/info' Making clean in init make[5]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/f77/init' test -z "summary.xml summary.tap" || rm -f summary.xml summary.tap test -z "baseenvf" || rm -f baseenvf rm -f *.o make[5]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/f77/init' Making clean in comm make[5]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/f77/comm' test -z "summary.xml summary.tap" || rm -f summary.xml summary.tap test -z "commnamef commerrf" || rm -f commnamef commerrf rm -f *.o make[5]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/f77/comm' Making clean in topo make[5]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/f77/topo' test -z "summary.xml summary.tap" || rm -f summary.xml summary.tap test -z "cartcrf dgraph_wgtf dgraph_unwgtf" || rm -f cartcrf dgraph_wgtf dgraph_unwgtf rm -f *.o make[5]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/f77/topo' Making clean in ext make[5]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/f77/ext' test -z "summary.xml summary.tap" || rm -f summary.xml summary.tap test -z "c2f2cf ctypesinf c2fmult" || rm -f c2f2cf ctypesinf c2fmult rm -f *.o make[5]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/f77/ext' Making clean in spawn make[5]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/f77/spawn' test -z "summary.xml summary.tap" || rm -f summary.xml summary.tap test -z "namepubf spawnf spawnargvf spawnmultf spawnmult2f connaccf" || rm -f namepubf spawnf spawnargvf spawnmultf spawnmult2f connaccf rm -f *.o make[5]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/f77/spawn' Making clean in io make[5]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/f77/io' test -z "summary.xml summary.tap gen-src-tmp gen-src-stamp" || rm -f summary.xml summary.tap gen-src-tmp gen-src-stamp rm -f .iotest.txt.* test -z "iwriteatf iwritef iwriteshf writef writeatf writeallf writeallbef writeordf writeordbef writeshf writeatallf writeatallbef fileerrf fileinfof shpositionf atomicityf miscfilef setviewcurf c2fmultio c2f2ciof" || rm -f iwriteatf iwritef iwriteshf writef writeatf writeallf writeallbef writeordf writeordbef writeshf writeatallf writeatallbef fileerrf fileinfof shpositionf atomicityf miscfilef setviewcurf c2fmultio c2f2ciof rm -f *.o make[5]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/f77/io' Making clean in rma make[5]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/f77/rma' test -z "summary.xml summary.tap" || rm -f summary.xml summary.tap test -z "winscale1f winscale2f winfencef wingetf winerrf winnamef wingroupf winaccf winaccf c2f2cwinf baseattrwinf winattrf winattr2f" || rm -f winscale1f winscale2f winfencef wingetf winerrf winnamef wingroupf winaccf winaccf c2f2cwinf baseattrwinf winattrf winattr2f rm -f *.o make[5]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/f77/rma' make[5]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/f77' test -z "summary.xml summary.tap" || rm -f summary.xml summary.tap make[5]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/f77' make[4]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/f77' Making clean in f90 make[4]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/f90' Making clean in util make[5]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/f90/util' rm -f *.o make[5]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/f90/util' Making clean in timer make[5]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/f90/timer' test -z "summary.xml summary.tap" || rm -f summary.xml summary.tap test -z "wtimef90" || rm -f wtimef90 rm -f *.o make[5]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/f90/timer' Making clean in attr make[5]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/f90/attr' test -z "summary.xml summary.tap" || rm -f summary.xml summary.tap if [ "mod" != "" ] ; then rm -f *.mod ; fi test -z "attrmpi1f90 baseattrf90 baseattr2f90 commattrf90 commattr2f90 commattr3f90 typeattrf90 typeattr2f90 typeattr3f90 fandcattrf90 baseattr3f90 attrlangf90" || rm -f attrmpi1f90 baseattrf90 baseattr2f90 commattrf90 commattr2f90 commattr3f90 typeattrf90 typeattr2f90 typeattr3f90 fandcattrf90 baseattr3f90 attrlangf90 rm -f *.o make[5]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/f90/attr' Making clean in coll make[5]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/f90/coll' test -z "summary.xml summary.tap" || rm -f summary.xml summary.tap test -z "uallreducef90 exscanf90 alltoallwf90 inplacef90 allredint8f90 allredopttf90 reducelocalf90 alltoallvf90 redscatf90 split_typef90 nonblockingf90 vw_inplacef90 red_scat_blockf90 nonblocking_inpf90" || rm -f uallreducef90 exscanf90 alltoallwf90 inplacef90 allredint8f90 allredopttf90 reducelocalf90 alltoallvf90 redscatf90 split_typef90 nonblockingf90 vw_inplacef90 red_scat_blockf90 nonblocking_inpf90 rm -f *.o make[5]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/f90/coll' Making clean in datatype make[5]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/f90/datatype' test -z "summary.xml summary.tap" || rm -f summary.xml summary.tap test -z "typenamef90 typesnamef90 typecntsf90 typesubf90 typem2f90 gaddressf90 packef90 allctypesf90 hindex1f90 hindexed_blockf90 typename3f90 structf indtype createf90 sizeof kinds trf90 get_elem_d get_elem_u" || rm -f typenamef90 typesnamef90 typecntsf90 typesubf90 typem2f90 gaddressf90 packef90 allctypesf90 hindex1f90 hindexed_blockf90 typename3f90 structf indtype createf90 sizeof kinds trf90 get_elem_d get_elem_u rm -f *.o make[5]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/f90/datatype' Making clean in pt2pt make[5]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/f90/pt2pt' test -z "summary.xml summary.tap" || rm -f summary.xml summary.tap test -z "allpairf90 statusesf90 greqf90 mprobef90" || rm -f allpairf90 statusesf90 greqf90 mprobef90 rm -f *.o make[5]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/f90/pt2pt' Making clean in info make[5]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/f90/info' test -z "summary.xml summary.tap" || rm -f summary.xml summary.tap test -z "infotestf90 infotest2f90" || rm -f infotestf90 infotest2f90 rm -f *.o make[5]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/f90/info' Making clean in comm make[5]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/f90/comm' test -z "summary.xml summary.tap" || rm -f summary.xml summary.tap test -z "commnamef90 commerrf90" || rm -f commnamef90 commerrf90 rm -f *.o make[5]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/f90/comm' Making clean in topo make[5]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/f90/topo' test -z "summary.xml summary.tap" || rm -f summary.xml summary.tap test -z "cartcrf90 dgraph_wgtf90 dgraph_unwgtf90" || rm -f cartcrf90 dgraph_wgtf90 dgraph_unwgtf90 rm -f *.o make[5]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/f90/topo' Making clean in ext make[5]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/f90/ext' test -z "summary.xml summary.tap" || rm -f summary.xml summary.tap test -z "c2f2cf90 ctypesinf90 c2f90mult" || rm -f c2f2cf90 ctypesinf90 c2f90mult rm -f *.o make[5]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/f90/ext' Making clean in init make[5]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/f90/init' test -z "summary.xml summary.tap" || rm -f summary.xml summary.tap test -z "baseenvf90" || rm -f baseenvf90 rm -f *.o make[5]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/f90/init' Making clean in misc make[5]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/f90/misc' test -z "summary.xml summary.tap" || rm -f summary.xml summary.tap test -z "sizeof2" || rm -f sizeof2 rm -f *.o make[5]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/f90/misc' Making clean in f90types make[5]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/f90/f90types' test -z "summary.xml summary.tap" || rm -f summary.xml summary.tap test -z "createf90types" || rm -f createf90types rm -f *.o make[5]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/f90/f90types' Making clean in rma make[5]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/f90/rma' test -z "summary.xml summary.tap" || rm -f summary.xml summary.tap test -z "winscale1f90 winscale2f90 winfencef90 wingetf90 winerrf90 winnamef90 wingroupf90 winaccf90 winaccf90 c2f2cwinf90 baseattrwinf90 winattrf90 winattr2f90" || rm -f winscale1f90 winscale2f90 winfencef90 wingetf90 winerrf90 winnamef90 wingroupf90 winaccf90 winaccf90 c2f2cwinf90 baseattrwinf90 winattrf90 winattr2f90 rm -f *.o make[5]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/f90/rma' Making clean in spawn make[5]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/f90/spawn' test -z "summary.xml summary.tap" || rm -f summary.xml summary.tap test -z "namepubf90 spawnf90 spawnargvf90 spawnmultf90 spawnmult2f90 connaccf90 spawnargvf03 spawnmultf03" || rm -f namepubf90 spawnf90 spawnargvf90 spawnmultf90 spawnmult2f90 connaccf90 spawnargvf03 spawnmultf03 rm -f *.o make[5]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/f90/spawn' Making clean in io make[5]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/f90/io' test -z "summary.xml summary.tap gen-src-tmp gen-src-stamp" || rm -f summary.xml summary.tap gen-src-tmp gen-src-stamp rm -f .iotest.txt.* test -z "iwriteatf90 iwritef90 iwriteshf90 writef90 writeatf90 writeallf90 writeallbef90 writeordf90 writeordbef90 writeshf90 writeatallf90 writeatallbef90 fileerrf90 fileinfof90 shpositionf90 atomicityf90 miscfilef90 setviewcurf90 c2f90multio c2f2ciof90" || rm -f iwriteatf90 iwritef90 iwriteshf90 writef90 writeatf90 writeallf90 writeallbef90 writeordf90 writeordbef90 writeshf90 writeatallf90 writeatallbef90 fileerrf90 fileinfof90 shpositionf90 atomicityf90 miscfilef90 setviewcurf90 c2f90multio c2f2ciof90 rm -f *.o make[5]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/f90/io' make[5]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/f90' test -z "summary.xml summary.tap" || rm -f summary.xml summary.tap make[5]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/f90' make[4]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/f90' Making clean in cxx make[4]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/cxx' Making clean in util make[5]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/cxx/util' rm -f *.o make[5]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/cxx/util' Making clean in attr make[5]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/cxx/attr' test -z "summary.xml summary.tap" || rm -f summary.xml summary.tap test -z "attrtx attricx baseattrcommx fkeyvalcommx fkeyvaltypex" || rm -f attrtx attricx baseattrcommx fkeyvalcommx fkeyvaltypex rm -f *.o make[5]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/cxx/attr' Making clean in pt2pt make[5]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/cxx/pt2pt' test -z "summary.xml summary.tap" || rm -f summary.xml summary.tap test -z "bsend1cxx sendrecvx" || rm -f bsend1cxx sendrecvx rm -f *.o make[5]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/cxx/pt2pt' Making clean in init make[5]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/cxx/init' test -z "summary.xml summary.tap" || rm -f summary.xml summary.tap test -z "baseenv initstatx initstat2x" || rm -f baseenv initstatx initstat2x rm -f *.o make[5]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/cxx/init' Making clean in info make[5]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/cxx/info' test -z "summary.xml summary.tap" || rm -f summary.xml summary.tap test -z "infodupx infodelx infovallenx infoorderx" || rm -f infodupx infodelx infovallenx infoorderx rm -f *.o make[5]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/cxx/info' Making clean in comm make[5]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/cxx/comm' test -z "summary.xml summary.tap" || rm -f summary.xml summary.tap test -z "commname2" || rm -f commname2 rm -f *.o make[5]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/cxx/comm' Making clean in coll make[5]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/cxx/coll' test -z "summary.xml summary.tap" || rm -f summary.xml summary.tap test -z "arcomplex uallredx uallreduce ureduce uscan uexscan icbcastx icbarrierx icgatherx icgathervx icscatterx icscattervx icallgatherx icallgathervx icallreducex icreducex icalltoallx alltoallw2x reduceboolx" || rm -f arcomplex uallredx uallreduce ureduce uscan uexscan icbcastx icbarrierx icgatherx icgathervx icscatterx icscattervx icallgatherx icallgathervx icallreducex icreducex icalltoallx alltoallw2x reduceboolx rm -f *.o make[5]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/cxx/coll' Making clean in datatype make[5]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/cxx/datatype' test -z "summary.xml summary.tap" || rm -f summary.xml summary.tap test -z "packsizex typecntsx typenamex typemiscx" || rm -f packsizex typecntsx typenamex typemiscx rm -f *.o make[5]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/cxx/datatype' Making clean in errhan make[5]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/cxx/errhan' test -z "summary.xml summary.tap" || rm -f summary.xml summary.tap test -z "commcallx" || rm -f commcallx rm -f *.o make[5]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/cxx/errhan' Making clean in io make[5]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/cxx/io' test -z "summary.xml summary.tap gen-src-tmp gen-src-stamp" || rm -f summary.xml summary.tap gen-src-tmp gen-src-stamp rm -f .iotest.txt.* test -z "iwriteatx iwritex iwriteshx writex writeatx writeallx writeatallx writeallbex writeordx writeordbex writeshx writeatallbex iwriteatnosx iwritenosx iwriteshnosx writenosx writeatnosx writeallnosx writeatallnosx writeallbenosx writeordnosx writeordbenosx writeshnosx writeatallbenosx fileerrx fileinfox shpositionx setinfox filemiscx seekavail" || rm -f iwriteatx iwritex iwriteshx writex writeatx writeallx writeatallx writeallbex writeordx writeordbex writeshx writeatallbex iwriteatnosx iwritenosx iwriteshnosx writenosx writeatnosx writeallnosx writeatallnosx writeallbenosx writeordnosx writeordbenosx writeshnosx writeatallbenosx fileerrx fileinfox shpositionx setinfox filemiscx seekavail rm -f *.o make[5]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/cxx/io' Making clean in rma make[5]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/cxx/rma' test -z "summary.xml summary.tap" || rm -f summary.xml summary.tap test -z "winnamex wincallx getgroupx winfencex winscale1x winscale2x fkeyvalwinx" || rm -f winnamex wincallx getgroupx winfencex winscale1x winscale2x fkeyvalwinx rm -f *.o make[5]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/cxx/rma' Making clean in spawn make[5]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/cxx/spawn' test -z "summary.xml summary.tap" || rm -f summary.xml summary.tap test -z "spawnargvx spawnintrax namepubx selfconaccx" || rm -f spawnargvx spawnintrax namepubx selfconaccx rm -f *.o make[5]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/cxx/spawn' make[5]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/cxx' test -z "summary.xml summary.tap" || rm -f summary.xml summary.tap make[5]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/cxx' make[4]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/cxx' Making clean in threads make[4]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/threads' Making clean in util make[5]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/threads/util' rm -f *.o make[5]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/threads/util' Making clean in pt2pt make[5]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/threads/pt2pt' test -z "summary.xml summary.tap" || rm -f summary.xml summary.tap test -z "threads threaded_sr alltoall sendselfth greq_wait greq_test multisend multisend2 multisend3 multisend4" || rm -f threads threaded_sr alltoall sendselfth greq_wait greq_test multisend multisend2 multisend3 multisend4 rm -f *.o make[5]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/threads/pt2pt' Making clean in comm make[5]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/threads/comm' test -z "summary.xml summary.tap" || rm -f summary.xml summary.tap test -z "ctxdup dup_leak_test comm_dup_deadlock comm_create_threads comm_create_group_threads" || rm -f ctxdup dup_leak_test comm_dup_deadlock comm_create_threads comm_create_group_threads rm -f *.o make[5]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/threads/comm' Making clean in init make[5]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/threads/init' test -z "summary.xml summary.tap" || rm -f summary.xml summary.tap test -z "initth" || rm -f initth rm -f *.o make[5]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/threads/init' Making clean in spawn make[5]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/threads/spawn' test -z "summary.xml summary.tap" || rm -f summary.xml summary.tap test -z "multispawn th_taskmaster" || rm -f multispawn th_taskmaster rm -f *.o make[5]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/threads/spawn' make[5]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/threads' test -z "summary.xml summary.tap" || rm -f summary.xml summary.tap make[5]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/threads' make[4]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/threads' Making clean in spawn make[4]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/spawn' test -z "summary.xml summary.tap" || rm -f summary.xml summary.tap test -z "namepub spawn1 spawninfo1 spawnminfo1 spawn2 spawnintra spawnargv spawnmanyarg spaconacc spaconacc2 selfconacc spawnmult2 taskmaster join disconnect_reconnect disconnect_reconnect2 disconnect_reconnect3 multiple_ports multiple_ports2 spaiccreate spaiccreate2 disconnect disconnect2 disconnect3 pgroup_connect_test pgroup_intercomm_test concurrent_spawns" || rm -f namepub spawn1 spawninfo1 spawnminfo1 spawn2 spawnintra spawnargv spawnmanyarg spaconacc spaconacc2 selfconacc spawnmult2 taskmaster join disconnect_reconnect disconnect_reconnect2 disconnect_reconnect3 multiple_ports multiple_ports2 spaiccreate spaiccreate2 disconnect disconnect2 disconnect3 pgroup_connect_test pgroup_intercomm_test concurrent_spawns rm -f *.o make[4]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi/spawn' Making clean in . make[4]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi' test -z "summary.xml summary.tap" || rm -f summary.xml summary.tap make[4]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi' make[3]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/mpi' Making clean in commands make[3]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/commands' test -z "err.txt out.log out.txt a.out" || rm -f err.txt out.log out.txt a.out rm -rf .libs _libs rm -f stdiotest stdintest stdintest2 checkenv1 rtest rtestf rtestx testout rm -f *.o rm -f *.lo make[3]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test/commands' Making clean in . make[3]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test' rm -rf .libs _libs rm -f *.lo make[3]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test' make[2]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/test' rm -f /global/homes/m/madams/petsc_maint/arch-xe6-opt64/bin/mpic++ test -z "" || rm -f test -z "" || rm -f rm -f *.o rm -f src/binding/cxx/*.o rm -f src/binding/cxx/*.lo rm -f src/binding/f77/*.o rm -f src/binding/f77/*.lo rm -f src/binding/f90/*.o rm -f src/binding/f90/*.lo rm -f src/env/*.o rm -f src/glue/romio/*.o rm -f src/glue/romio/*.lo rm -f src/mpi/attr/*.o rm -f src/mpi/attr/*.lo rm -f src/mpi/coll/*.o rm -f src/mpi/coll/*.lo rm -f src/mpi/comm/*.o rm -f src/mpi/comm/*.lo rm -f src/mpi/datatype/*.o rm -f src/mpi/datatype/*.lo rm -f src/mpi/debugger/*.o rm -f src/mpi/debugger/*.lo rm -f src/mpi/errhan/*.o rm -f src/mpi/errhan/*.lo rm -f src/mpi/group/*.o rm -f src/mpi/group/*.lo rm -f src/mpi/info/*.o rm -f src/mpi/info/*.lo rm -f src/mpi/init/*.o rm -f src/mpi/init/*.lo rm -f src/mpi/misc/*.o rm -f src/mpi/misc/*.lo rm -f src/mpi/pt2pt/*.o rm -f src/mpi/pt2pt/*.lo rm -f src/mpi/rma/*.o rm -f src/mpi/rma/*.lo rm -f src/mpi/spawn/*.o rm -f src/mpi/spawn/*.lo rm -f src/mpi/timer/*.o rm -f src/mpi/timer/*.lo rm -f src/mpi/topo/*.o rm -f src/mpi/topo/*.lo rm -f src/mpi_t/*.o rm -f src/mpi_t/*.lo rm -f src/mpid/ch3/channels/nemesis/netmod/mx/*.o rm -f src/mpid/ch3/channels/nemesis/netmod/mx/*.lo rm -f src/mpid/ch3/channels/nemesis/netmod/newmad/*.o rm -f src/mpid/ch3/channels/nemesis/netmod/newmad/*.lo rm -f src/mpid/ch3/channels/nemesis/netmod/none/*.o rm -f src/mpid/ch3/channels/nemesis/netmod/none/*.lo rm -f src/mpid/ch3/channels/nemesis/netmod/portals4/*.o rm -f src/mpid/ch3/channels/nemesis/netmod/portals4/*.lo rm -f src/mpid/ch3/channels/nemesis/netmod/scif/*.o rm -f src/mpid/ch3/channels/nemesis/netmod/scif/*.lo rm -f src/mpid/ch3/channels/nemesis/netmod/tcp/*.o rm -f src/mpid/ch3/channels/nemesis/netmod/tcp/*.lo rm -f src/mpid/ch3/channels/nemesis/src/*.o rm -f src/mpid/ch3/channels/nemesis/src/*.lo rm -f src/mpid/ch3/channels/nemesis/utils/monitor/*.o rm -f src/mpid/ch3/channels/nemesis/utils/monitor/*.lo rm -f src/mpid/ch3/channels/nemesis/utils/replacements/*.o rm -f src/mpid/ch3/channels/nemesis/utils/replacements/*.lo rm -f src/mpid/ch3/channels/sock/src/*.o rm -f src/mpid/ch3/channels/sock/src/*.lo rm -f src/mpid/ch3/src/*.o rm -f src/mpid/ch3/src/*.lo rm -f src/mpid/ch3/util/ftb/*.o rm -f src/mpid/ch3/util/ftb/*.lo rm -f src/mpid/ch3/util/sock/*.o rm -f src/mpid/ch3/util/sock/*.lo rm -f src/mpid/common/datatype/*.o rm -f src/mpid/common/datatype/*.lo rm -f src/mpid/common/datatype/dataloop/*.o rm -f src/mpid/common/datatype/dataloop/*.lo rm -f src/mpid/common/sched/*.o rm -f src/mpid/common/sched/*.lo rm -f src/mpid/common/sock/poll/*.o rm -f src/mpid/common/sock/poll/*.lo rm -f src/mpid/common/thread/*.o rm -f src/mpid/common/thread/*.lo rm -f src/mpid/pamid/src/*.o rm -f src/mpid/pamid/src/*.lo rm -f src/mpid/pamid/src/coll/*.o rm -f src/mpid/pamid/src/coll/*.lo rm -f src/mpid/pamid/src/coll/allgather/*.o rm -f src/mpid/pamid/src/coll/allgather/*.lo rm -f src/mpid/pamid/src/coll/allgatherv/*.o rm -f src/mpid/pamid/src/coll/allgatherv/*.lo rm -f src/mpid/pamid/src/coll/allreduce/*.o rm -f src/mpid/pamid/src/coll/allreduce/*.lo rm -f src/mpid/pamid/src/coll/alltoall/*.o rm -f src/mpid/pamid/src/coll/alltoall/*.lo rm -f src/mpid/pamid/src/coll/alltoallv/*.o rm -f src/mpid/pamid/src/coll/alltoallv/*.lo rm -f src/mpid/pamid/src/coll/barrier/*.o rm -f src/mpid/pamid/src/coll/barrier/*.lo rm -f src/mpid/pamid/src/coll/bcast/*.o rm -f src/mpid/pamid/src/coll/bcast/*.lo rm -f src/mpid/pamid/src/coll/gather/*.o rm -f src/mpid/pamid/src/coll/gather/*.lo rm -f src/mpid/pamid/src/coll/gatherv/*.o rm -f src/mpid/pamid/src/coll/gatherv/*.lo rm -f src/mpid/pamid/src/coll/reduce/*.o rm -f src/mpid/pamid/src/coll/reduce/*.lo rm -f src/mpid/pamid/src/coll/scan/*.o rm -f src/mpid/pamid/src/coll/scan/*.lo rm -f src/mpid/pamid/src/coll/scatter/*.o rm -f src/mpid/pamid/src/coll/scatter/*.lo rm -f src/mpid/pamid/src/coll/scatterv/*.o rm -f src/mpid/pamid/src/coll/scatterv/*.lo rm -f src/mpid/pamid/src/comm/*.o rm -f src/mpid/pamid/src/comm/*.lo rm -f src/mpid/pamid/src/dyntask/*.o rm -f src/mpid/pamid/src/dyntask/*.lo rm -f src/mpid/pamid/src/misc/*.o rm -f src/mpid/pamid/src/misc/*.lo rm -f src/mpid/pamid/src/mpix/*.o rm -f src/mpid/pamid/src/mpix/*.lo rm -f src/mpid/pamid/src/onesided/*.o rm -f src/mpid/pamid/src/onesided/*.lo rm -f src/mpid/pamid/src/pamix/*.o rm -f src/mpid/pamid/src/pamix/*.lo rm -f src/mpid/pamid/src/pt2pt/*.o rm -f src/mpid/pamid/src/pt2pt/*.lo rm -f src/mpid/pamid/src/pt2pt/persistent/*.o rm -f src/mpid/pamid/src/pt2pt/persistent/*.lo rm -f src/mutex/*.o rm -f src/mutex/*.lo rm -f src/nameserv/file/*.o rm -f src/nameserv/file/*.lo rm -f src/nameserv/mpd/*.o rm -f src/nameserv/mpd/*.lo rm -f src/nameserv/pmi/*.o rm -f src/nameserv/pmi/*.lo rm -f src/pm/gforker/*.o rm -f src/pm/remshell/*.o rm -f src/pm/smpd/*.o rm -f src/pm/smpd/*.lo rm -f src/pm/smpd/sock/poll/*.o rm -f src/pm/smpd/sock/poll/*.lo rm -f src/pm/util/*.o rm -f src/pmi/pmi2/poe/*.o rm -f src/pmi/pmi2/poe/*.lo rm -f src/pmi/pmi2/simple/*.o rm -f src/pmi/pmi2/simple/*.lo rm -f src/pmi/simple/*.o rm -f src/pmi/simple/*.lo rm -f src/pmi/smpd/*.o rm -f src/pmi/smpd/*.lo rm -f src/util/dbg/*.o rm -f src/util/dbg/*.lo rm -f src/util/instrm/*.o rm -f src/util/instrm/*.lo rm -f src/util/logging/rlog/*.o rm -f src/util/logging/rlog/*.lo rm -f src/util/mem/*.o rm -f src/util/mem/*.lo rm -f src/util/msgs/*.o rm -f src/util/msgs/*.lo rm -f src/util/other/*.o rm -f src/util/other/*.lo rm -f src/util/param/*.o rm -f src/util/param/*.lo rm -f src/util/procmap/*.o rm -f src/util/procmap/*.lo rm -f src/util/thread/*.o rm -f src/util/thread/*.lo rm -f *.lo make[1]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106' Making clean in examples make[1]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/examples' rm -rf .libs _libs rm -f cpi rm -f *.o rm -f *.lo make[1]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/examples' sh: cd /global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106 && /usr/bin/make -j 10 all Executing: cd /global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106 && /usr/bin/make -j 10 all sh: if test ! -h ./src/include/mpio.h ; then \ rm -f ./src/include/mpio.h ; \ ( cd ./src/include && \ ln -s ../mpi/romio/include/mpio.h ) ; \ fi make all-recursive make[1]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106' Making all in src/mpl make[2]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/src/mpl' CC mpltrmem.lo CC mplstr.lo CC mplenv.lo CCLD libmpl.la make[2]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/src/mpl' Making all in src/openpa make[2]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/src/openpa' Making all in src make[3]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/src/openpa/src' make all-am make[4]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/src/openpa/src' CC opa_primitives.lo CC opa_queue.lo CCLD libopa.la make[4]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/src/openpa/src' make[3]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/src/openpa/src' Making all in test make[3]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/src/openpa/test' make[3]: Nothing to be done for `all'. make[3]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/src/openpa/test' make[3]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/src/openpa' make[3]: Nothing to be done for `all-am'. make[3]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/src/openpa' make[2]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/src/openpa' Making all in src/mpi/romio make[2]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/src/mpi/romio' make[3]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/src/mpi/romio' CC mpi-io/close.lo CC mpi-io/delete.lo CC mpi-io/file_c2f.lo CC mpi-io/file_f2c.lo CC mpi-io/fsync.lo CC mpi-io/get_amode.lo CC mpi-io/get_atom.lo CC mpi-io/get_bytoff.lo CC mpi-io/get_extent.lo CC mpi-io/get_group.lo CC mpi-io/get_info.lo CC mpi-io/get_posn.lo CC mpi-io/get_posn_sh.lo CC mpi-io/get_size.lo CC mpi-io/get_view.lo CC mpi-io/iread.lo CC mpi-io/iread_at.lo CC mpi-io/iread_sh.lo CC mpi-io/iwrite.lo CC mpi-io/iwrite_at.lo CC mpi-io/iwrite_sh.lo CC mpi-io/open.lo CC mpi-io/prealloc.lo CC mpi-io/rd_atallb.lo CC mpi-io/rd_atalle.lo CC mpi-io/read.lo CC mpi-io/read_all.lo CC mpi-io/read_allb.lo CC mpi-io/read_alle.lo CC mpi-io/read_at.lo CC mpi-io/read_atall.lo CC mpi-io/read_ord.lo CC mpi-io/read_ordb.lo CC mpi-io/read_orde.lo CC mpi-io/read_sh.lo CC mpi-io/register_datarep.lo CC mpi-io/seek.lo CC mpi-io/seek_sh.lo CC mpi-io/set_atom.lo CC mpi-io/set_info.lo CC mpi-io/set_size.lo CC mpi-io/set_view.lo CC mpi-io/wr_atallb.lo CC mpi-io/wr_atalle.lo CC mpi-io/write.lo CC mpi-io/write_all.lo CC mpi-io/write_allb.lo CC mpi-io/write_alle.lo CC mpi-io/write_at.lo CC mpi-io/write_atall.lo CC mpi-io/write_ord.lo CC mpi-io/write_ordb.lo CC mpi-io/write_orde.lo CC mpi-io/write_sh.lo CC mpi-io/glue/mpich/mpio_file.lo CC mpi-io/glue/mpich/mpio_err.lo CC mpi-io/mpich_fileutil.lo CC mpi-io/mpir-mpioinit.lo CC mpi-io/mpiu_greq.lo CC mpi-io/mpiu_external32.lo CC adio/ad_nfs/ad_nfs_read.lo CC adio/ad_nfs/ad_nfs_open.lo CC adio/ad_nfs/ad_nfs_write.lo CC adio/ad_nfs/ad_nfs_done.lo CC adio/ad_nfs/ad_nfs_fcntl.lo CC adio/ad_nfs/ad_nfs_iread.lo CC adio/ad_nfs/ad_nfs_iwrite.lo CC adio/ad_nfs/ad_nfs_wait.lo CC adio/ad_nfs/ad_nfs_setsh.lo CC adio/ad_nfs/ad_nfs_getsh.lo CC adio/ad_nfs/ad_nfs.lo CC adio/ad_nfs/ad_nfs_resize.lo CC adio/ad_nfs/ad_nfs_features.lo CC adio/ad_testfs/ad_testfs_close.lo CC adio/ad_testfs/ad_testfs_read.lo CC adio/ad_testfs/ad_testfs_rdcoll.lo CC adio/ad_testfs/ad_testfs_wrcoll.lo CC adio/ad_testfs/ad_testfs_open.lo CC adio/ad_testfs/ad_testfs_write.lo CC adio/ad_testfs/ad_testfs_done.lo CC adio/ad_testfs/ad_testfs_fcntl.lo CC adio/ad_testfs/ad_testfs_iread.lo CC adio/ad_testfs/ad_testfs_iwrite.lo CC adio/ad_testfs/ad_testfs_wait.lo CC adio/ad_testfs/ad_testfs_flush.lo CC adio/ad_testfs/ad_testfs_seek.lo CC adio/ad_testfs/ad_testfs_resize.lo CC adio/ad_testfs/ad_testfs_hints.lo CC adio/ad_testfs/ad_testfs_delete.lo CC adio/ad_testfs/ad_testfs.lo CC adio/ad_ufs/ad_ufs.lo CC adio/ad_ufs/ad_ufs_open.lo CC adio/common/ad_aggregate.lo CC adio/common/ad_aggregate_new.lo CC adio/common/ad_close.lo CC adio/common/ad_coll_build_req_new.lo CC adio/common/ad_coll_exch_new.lo CC adio/common/ad_darray.lo CC adio/common/ad_delete.lo CC adio/common/ad_done.lo CC adio/common/ad_done_fake.lo CC adio/common/ad_end.lo CC adio/common/ad_fcntl.lo CC adio/common/ad_features.lo CC adio/common/ad_flush.lo CC adio/common/ad_fstype.lo CC adio/common/ad_get_sh_fp.lo CC adio/common/ad_hints.lo CC adio/common/ad_init.lo CC adio/common/ad_io_coll.lo CC adio/common/ad_iopen.lo CC adio/common/ad_iread.lo CC adio/common/ad_iread_fake.lo CC adio/common/ad_iwrite.lo CC adio/common/ad_iwrite_fake.lo CC adio/common/ad_open.lo CC adio/common/ad_opencoll.lo CC adio/common/ad_opencoll_failsafe.lo CC adio/common/ad_opencoll_scalable.lo CC adio/common/ad_prealloc.lo CC adio/common/ad_read.lo CC adio/common/ad_read_coll.lo CC adio/common/ad_read_str.lo CC adio/common/ad_read_str_naive.lo CC adio/common/ad_resize.lo CC adio/common/ad_seek.lo CC adio/common/ad_set_sh_fp.lo CC adio/common/ad_set_view.lo CC adio/common/ad_subarray.lo CC adio/common/ad_wait.lo CC adio/common/ad_wait_fake.lo CC adio/common/ad_write.lo CC adio/common/ad_write_coll.lo CC adio/common/ad_write_nolock.lo CC adio/common/ad_write_str.lo CC adio/common/ad_write_str_naive.lo CC adio/common/adi_close.lo CC adio/common/byte_offset.lo CC adio/common/cb_config_list.lo CC adio/common/eof_offset.lo CC adio/common/error.lo CC adio/common/flatten.lo CC adio/common/get_fp_posn.lo CC adio/common/greq_fns.lo CC adio/common/heap-sort.lo CC adio/common/iscontig.lo CC adio/common/lock.lo CC adio/common/malloc.lo CC adio/common/shfp_fname.lo CC adio/common/status_setb.lo CC adio/common/strfns.lo CC adio/common/system_hints.lo CCLD libromio.la make[3]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/src/mpi/romio' make[2]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/src/mpi/romio' Making all in src/pm/hydra make[2]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/src/pm/hydra' Making all in ../../mpl make[3]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/src/mpl' make[3]: Nothing to be done for `all'. make[3]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/src/mpl' Making all in tools/topo/hwloc/hwloc make[3]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/src/pm/hydra/tools/topo/hwloc/hwloc' Making all in src make[4]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/src/pm/hydra/tools/topo/hwloc/hwloc/src' CC topology.lo CC traversal.lo CC distances.lo CC components.lo CC bind.lo CC bitmap.lo CC misc.lo CC topology-noos.lo CC base64.lo CC topology-synthetic.lo CC topology-custom.lo CC topology-xml.lo CC topology-xml-nolibxml.lo CC topology-xml-libxml.lo CC topology-pci.lo CC topology-linux.lo CC topology-x86.lo CCLD libhwloc_embedded.la make[4]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/src/pm/hydra/tools/topo/hwloc/hwloc/src' Making all in include make[4]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/src/pm/hydra/tools/topo/hwloc/hwloc/include' make[4]: Nothing to be done for `all'. make[4]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/src/pm/hydra/tools/topo/hwloc/hwloc/include' make[4]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/src/pm/hydra/tools/topo/hwloc/hwloc' make[4]: Nothing to be done for `all-am'. make[4]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/src/pm/hydra/tools/topo/hwloc/hwloc' make[3]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/src/pm/hydra/tools/topo/hwloc/hwloc' Making all in . make[3]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/src/pm/hydra' CC alloc.lo CC args.lo CC dbg.lo CC env.lo CC launch.lo CC signals.lo CC others.lo CC sock.lo CC string.lo CC topo.lo CC topo_hwloc.lo CC bsci_init.lo CC bsci_finalize.lo CC bsci_launch.lo CC bsci_query_node_list.lo CC bsci_query_proxy_id.lo CC bsci_query_native_int.lo CC bsci_wait.lo CC bsci_env.lo CC bscu_wait.lo CC bscu_cb.lo CC external_common.lo CC external_common_launch.lo CC fork_init.lo CC user_init.lo CC manual_init.lo CC rsh_init.lo CC rsh_env.lo CC ssh_init.lo CC ssh.lo CC ssh_env.lo CC ssh_finalize.lo CC slurm_init.lo CC slurm_launch.lo CC slurm_env.lo CC slurm_query_native_int.lo CC slurm_query_node_list.lo CC slurm_query_proxy_id.lo CC ll_init.lo CC ll_launch.lo CC ll_query_native_int.lo CC ll_query_node_list.lo CC ll_query_proxy_id.lo CC ll_env.lo CC lsf_init.lo CC lsf_query_native_int.lo CC lsf_query_node_list.lo CC lsf_env.lo CC sge_init.lo CC sge_query_native_int.lo CC sge_query_node_list.lo CC sge_env.lo CC pbs_init.lo CC pbs_query_native_int.lo CC pbs_query_node_list.lo CC cobalt_init.lo CC cobalt_query_native_int.lo CC cobalt_query_node_list.lo CC persist_init.lo CC persist_launch.lo CC persist_wait.lo CC ckpoint.lo CC demux.lo CC demux_poll.lo CC demux_select.lo CC debugger.lo CC hydt_ftb_dummy.lo CC uiu.lo CC pmiserv_pmi.lo CC pmiserv_pmi_v1.lo CC pmiserv_pmi_v2.lo CC pmiserv_pmci.lo CC pmiserv_cb.lo CC pmiserv_utils.lo CC common.lo CC pmi_v2_common.lo CC hydra_persist-persist_server.o CC hydra_nameserver-hydra_nameserver.o CC hydra_pmi_proxy-pmip.o CC hydra_pmi_proxy-pmip_cb.o CC hydra_pmi_proxy-pmip_utils.o CC hydra_pmi_proxy-pmip_pmi_v1.o CC hydra_pmi_proxy-pmip_pmi_v2.o CC hydra_pmi_proxy-common.o CC hydra_pmi_proxy-pmi_v2_common.o CC mpiexec.o CC utils.o CCLD libhydra.la CCLD hydra_persist CCLD hydra_nameserver CCLD libpm.la CCLD hydra_pmi_proxy make[3]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/src/pm/hydra' make[2]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/src/pm/hydra' make[1]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106' **** Configure header /scratch/scratchdirs/madams/petsc-i5209_/confdefs.h **** #if !defined(INCLUDED_UNKNOWN) #define INCLUDED_UNKNOWN #ifndef IS_COLORING_MAX #define IS_COLORING_MAX 65535 #endif #ifndef STDC_HEADERS #define STDC_HEADERS 1 #endif #ifndef MPIU_COLORING_VALUE #define MPIU_COLORING_VALUE MPI_UNSIGNED_SHORT #endif #ifndef PETSC_HAVE_STRING_H #define PETSC_HAVE_STRING_H 1 #endif #ifndef PETSC_HAVE_SYS_TYPES_H #define PETSC_HAVE_SYS_TYPES_H 1 #endif #ifndef PETSC_HAVE_ENDIAN_H #define PETSC_HAVE_ENDIAN_H 1 #endif #ifndef PETSC_HAVE_SYS_PROCFS_H #define PETSC_HAVE_SYS_PROCFS_H 1 #endif #ifndef PETSC_HAVE_DLFCN_H #define PETSC_HAVE_DLFCN_H 1 #endif #ifndef PETSC_HAVE_SCHED_H #define PETSC_HAVE_SCHED_H 1 #endif #ifndef PETSC_HAVE_STDINT_H #define PETSC_HAVE_STDINT_H 1 #endif #ifndef PETSC_HAVE_LINUX_KERNEL_H #define PETSC_HAVE_LINUX_KERNEL_H 1 #endif #ifndef PETSC_HAVE_TIME_H #define PETSC_HAVE_TIME_H 1 #endif #ifndef PETSC_HAVE_MATH_H #define PETSC_HAVE_MATH_H 1 #endif #ifndef PETSC_TIME_WITH_SYS_TIME #define PETSC_TIME_WITH_SYS_TIME 1 #endif #ifndef PETSC_HAVE_SYS_PARAM_H #define PETSC_HAVE_SYS_PARAM_H 1 #endif #ifndef PETSC_HAVE_PTHREAD_H #define PETSC_HAVE_PTHREAD_H 1 #endif #ifndef PETSC_HAVE_UNISTD_H #define PETSC_HAVE_UNISTD_H 1 #endif #ifndef PETSC_HAVE_STDLIB_H #define PETSC_HAVE_STDLIB_H 1 #endif #ifndef PETSC_HAVE_SYS_WAIT_H #define PETSC_HAVE_SYS_WAIT_H 1 #endif #ifndef PETSC_HAVE_SETJMP_H #define PETSC_HAVE_SETJMP_H 1 #endif #ifndef PETSC_HAVE_LIMITS_H #define PETSC_HAVE_LIMITS_H 1 #endif #ifndef PETSC_HAVE_SYS_UTSNAME_H #define PETSC_HAVE_SYS_UTSNAME_H 1 #endif #ifndef PETSC_HAVE_NETINET_IN_H #define PETSC_HAVE_NETINET_IN_H 1 #endif #ifndef PETSC_HAVE_SYS_SOCKET_H #define PETSC_HAVE_SYS_SOCKET_H 1 #endif #ifndef PETSC_HAVE_FLOAT_H #define PETSC_HAVE_FLOAT_H 1 #endif #ifndef PETSC_HAVE_SEARCH_H #define PETSC_HAVE_SEARCH_H 1 #endif #ifndef PETSC_HAVE_SYS_RESOURCE_H #define PETSC_HAVE_SYS_RESOURCE_H 1 #endif #ifndef PETSC_HAVE_SYS_TIMES_H #define PETSC_HAVE_SYS_TIMES_H 1 #endif #ifndef PETSC_HAVE_NETDB_H #define PETSC_HAVE_NETDB_H 1 #endif #ifndef PETSC_HAVE_MALLOC_H #define PETSC_HAVE_MALLOC_H 1 #endif #ifndef PETSC_HAVE_PWD_H #define PETSC_HAVE_PWD_H 1 #endif #ifndef PETSC_HAVE_FCNTL_H #define PETSC_HAVE_FCNTL_H 1 #endif #ifndef PETSC_HAVE_STRINGS_H #define PETSC_HAVE_STRINGS_H 1 #endif #ifndef PETSC_HAVE_SYS_SYSINFO_H #define PETSC_HAVE_SYS_SYSINFO_H 1 #endif #ifndef PETSC_HAVE_SYS_TIME_H #define PETSC_HAVE_SYS_TIME_H 1 #endif #ifndef PETSC_USING_F90 #define PETSC_USING_F90 1 #endif #ifndef PETSC_USING_F2003 #define PETSC_USING_F2003 1 #endif #ifndef PETSC_C_STATIC_INLINE #define PETSC_C_STATIC_INLINE static inline #endif #ifndef PETSC_HAVE_FORTRAN_UNDERSCORE #define PETSC_HAVE_FORTRAN_UNDERSCORE 1 #endif #ifndef PETSC_HAVE_CXX_NAMESPACE #define PETSC_HAVE_CXX_NAMESPACE 1 #endif #ifndef PETSC_C_RESTRICT #define PETSC_C_RESTRICT __restrict__ #endif #ifndef PETSC_CXX_RESTRICT #define PETSC_CXX_RESTRICT __restrict__ #endif #ifndef PETSC_CXX_STATIC_INLINE #define PETSC_CXX_STATIC_INLINE static inline #endif #ifndef PETSC_HAVE_FENV_H #define PETSC_HAVE_FENV_H 1 #endif #ifndef PETSC_HAVE_LIBDL #define PETSC_HAVE_LIBDL 1 #endif #ifndef PETSC_HAVE_TGAMMA #define PETSC_HAVE_TGAMMA 1 #endif #ifndef PETSC_HAVE_ERF #define PETSC_HAVE_ERF 1 #endif #ifndef PETSC_ARCH #define PETSC_ARCH "arch-xe6-opt64" #endif #ifndef PETSC_VERSION_DATE_GIT #define PETSC_VERSION_DATE_GIT "2014-03-14 14:14:39 -0500" #endif #ifndef PETSC_VERSION_GIT #define PETSC_VERSION_GIT "feac73e2bb2f3c66a339ba9462db539b05123c17" #endif #ifndef PETSC_DIR #define PETSC_DIR "/global/homes/m/madams/petsc_maint/" #endif #ifndef HAVE_GZIP #define HAVE_GZIP 1 #endif #ifndef PETSC_CLANGUAGE_C #define PETSC_CLANGUAGE_C 1 #endif #ifndef PETSC_USE_ERRORCHECKING #define PETSC_USE_ERRORCHECKING 1 #endif #ifndef PETSC_MISSING_DREAL #define PETSC_MISSING_DREAL 1 #endif #ifndef PETSC_BITS_PER_BYTE #define PETSC_BITS_PER_BYTE 8 #endif #ifndef PETSC_SIZEOF_VOID_P #define PETSC_SIZEOF_VOID_P 8 #endif #ifndef PETSC_RETSIGTYPE #define PETSC_RETSIGTYPE void #endif #ifndef PETSC_HAVE_CXX_COMPLEX #define PETSC_HAVE_CXX_COMPLEX 1 #endif #ifndef PETSC_SIZEOF_LONG #define PETSC_SIZEOF_LONG 8 #endif #ifndef PETSC_USE_FORTRANKIND #define PETSC_USE_FORTRANKIND 1 #endif #ifndef PETSC_SIZEOF_SIZE_T #define PETSC_SIZEOF_SIZE_T 8 #endif #ifndef PETSC_HAVE_SIGINFO_T #define PETSC_HAVE_SIGINFO_T 1 #endif #ifndef PETSC_SIZEOF_CHAR #define PETSC_SIZEOF_CHAR 1 #endif #ifndef PETSC_SIZEOF_DOUBLE #define PETSC_SIZEOF_DOUBLE 8 #endif #ifndef PETSC_SIZEOF_FLOAT #define PETSC_SIZEOF_FLOAT 4 #endif #ifndef PETSC_HAVE_C99_COMPLEX #define PETSC_HAVE_C99_COMPLEX 1 #endif #ifndef PETSC_SIZEOF_INT #define PETSC_SIZEOF_INT 4 #endif #ifndef PETSC_SIZEOF_LONG_LONG #define PETSC_SIZEOF_LONG_LONG 8 #endif #ifndef PETSC_SIZEOF_SHORT #define PETSC_SIZEOF_SHORT 2 #endif #ifndef PETSC_HAVE_STRCASECMP #define PETSC_HAVE_STRCASECMP 1 #endif #ifndef PETSC_HAVE_GET_NPROCS #define PETSC_HAVE_GET_NPROCS 1 #endif #ifndef PETSC_HAVE_POPEN #define PETSC_HAVE_POPEN 1 #endif #ifndef PETSC_HAVE_SIGSET #define PETSC_HAVE_SIGSET 1 #endif #ifndef PETSC_HAVE_GETWD #define PETSC_HAVE_GETWD 1 #endif #ifndef PETSC_HAVE_VSNPRINTF #define PETSC_HAVE_VSNPRINTF 1 #endif #ifndef PETSC_HAVE_TIMES #define PETSC_HAVE_TIMES 1 #endif #ifndef PETSC_HAVE_DLSYM #define PETSC_HAVE_DLSYM 1 #endif #ifndef PETSC_HAVE_SNPRINTF #define PETSC_HAVE_SNPRINTF 1 #endif #ifndef PETSC_HAVE_GETHOSTBYNAME #define PETSC_HAVE_GETHOSTBYNAME 1 #endif #ifndef PETSC_HAVE_GETCWD #define PETSC_HAVE_GETCWD 1 #endif #ifndef PETSC_HAVE_DLERROR #define PETSC_HAVE_DLERROR 1 #endif #ifndef PETSC_HAVE_FORK #define PETSC_HAVE_FORK 1 #endif #ifndef PETSC_HAVE_RAND #define PETSC_HAVE_RAND 1 #endif #ifndef PETSC_HAVE_GETTIMEOFDAY #define PETSC_HAVE_GETTIMEOFDAY 1 #endif #ifndef PETSC_HAVE_DLCLOSE #define PETSC_HAVE_DLCLOSE 1 #endif #ifndef PETSC_HAVE_UNAME #define PETSC_HAVE_UNAME 1 #endif #ifndef PETSC_HAVE_GETHOSTNAME #define PETSC_HAVE_GETHOSTNAME 1 #endif #ifndef PETSC_HAVE_MKSTEMP #define PETSC_HAVE_MKSTEMP 1 #endif #ifndef PETSC_HAVE_SIGACTION #define PETSC_HAVE_SIGACTION 1 #endif #ifndef PETSC_HAVE_DRAND48 #define PETSC_HAVE_DRAND48 1 #endif #ifndef PETSC_HAVE_MEMALIGN #define PETSC_HAVE_MEMALIGN 1 #endif #ifndef PETSC_HAVE_VA_COPY #define PETSC_HAVE_VA_COPY 1 #endif #ifndef PETSC_HAVE_CLOCK #define PETSC_HAVE_CLOCK 1 #endif #ifndef PETSC_HAVE_ACCESS #define PETSC_HAVE_ACCESS 1 #endif #ifndef PETSC_HAVE_SIGNAL #define PETSC_HAVE_SIGNAL 1 #endif #ifndef PETSC_HAVE_USLEEP #define PETSC_HAVE_USLEEP 1 #endif #ifndef PETSC_HAVE_GETRUSAGE #define PETSC_HAVE_GETRUSAGE 1 #endif #ifndef PETSC_HAVE_VFPRINTF #define PETSC_HAVE_VFPRINTF 1 #endif #ifndef PETSC_HAVE_NANOSLEEP #define PETSC_HAVE_NANOSLEEP 1 #endif #ifndef PETSC_HAVE_GETDOMAINNAME #define PETSC_HAVE_GETDOMAINNAME 1 #endif #ifndef PETSC_HAVE_TIME #define PETSC_HAVE_TIME 1 #endif #ifndef PETSC_HAVE_LSEEK #define PETSC_HAVE_LSEEK 1 #endif #ifndef PETSC_HAVE_SOCKET #define PETSC_HAVE_SOCKET 1 #endif #ifndef PETSC_HAVE_SYSINFO #define PETSC_HAVE_SYSINFO 1 #endif #ifndef PETSC_HAVE_READLINK #define PETSC_HAVE_READLINK 1 #endif #ifndef PETSC_HAVE_REALPATH #define PETSC_HAVE_REALPATH 1 #endif #ifndef PETSC_HAVE_DLOPEN #define PETSC_HAVE_DLOPEN 1 #endif #ifndef PETSC_HAVE_MEMMOVE #define PETSC_HAVE_MEMMOVE 1 #endif #ifndef PETSC_HAVE__GFORTRAN_IARGC #define PETSC_HAVE__GFORTRAN_IARGC 1 #endif #ifndef PETSC_HAVE_GETPAGESIZE #define PETSC_HAVE_GETPAGESIZE 1 #endif #ifndef PETSC_HAVE_SLEEP #define PETSC_HAVE_SLEEP 1 #endif #ifndef PETSC_HAVE_VPRINTF #define PETSC_HAVE_VPRINTF 1 #endif #ifndef PETSC_HAVE_BZERO #define PETSC_HAVE_BZERO 1 #endif #ifndef PETSC_SIGNAL_CAST #define PETSC_SIGNAL_CAST #endif #ifndef PETSC_USE_SCALAR_REAL #define PETSC_USE_SCALAR_REAL 1 #endif #ifndef PETSC_HAVE_ISINF #define PETSC_HAVE_ISINF 1 #endif #ifndef PETSC_HAVE_ISNAN #define PETSC_HAVE_ISNAN 1 #endif #ifndef PETSC_USE_REAL_DOUBLE #define PETSC_USE_REAL_DOUBLE 1 #endif #ifndef PETSC_USE_INFO #define PETSC_USE_INFO 1 #endif #ifndef PETSC_Alignx #define PETSC_Alignx(a,b) #endif #ifndef PETSC_USE_BACKWARD_LOOP #define PETSC_USE_BACKWARD_LOOP 1 #endif #ifndef PETSC_USE_64BIT_INDICES #define PETSC_USE_64BIT_INDICES 1 #endif #ifndef PETSC_USE_LOG #define PETSC_USE_LOG 1 #endif #ifndef PETSC_IS_COLOR_VALUE_TYPE #define PETSC_IS_COLOR_VALUE_TYPE short #endif #ifndef PETSC_USE_CTABLE #define PETSC_USE_CTABLE 1 #endif #ifndef PETSC_LEVEL1_DCACHE_LINESIZE #define PETSC_LEVEL1_DCACHE_LINESIZE 64 #endif #ifndef PETSC_LEVEL1_DCACHE_SIZE #define PETSC_LEVEL1_DCACHE_SIZE 65536 #endif #ifndef PETSC_LEVEL1_DCACHE_ASSOC #define PETSC_LEVEL1_DCACHE_ASSOC 2 #endif #ifndef PETSC_USE_GDB_DEBUGGER #define PETSC_USE_GDB_DEBUGGER 1 #endif #ifndef PETSC_HAVE_FORTRAN_GET_COMMAND_ARGUMENT #define PETSC_HAVE_FORTRAN_GET_COMMAND_ARGUMENT 1 #endif #ifndef PETSC_HAVE_GFORTRAN_IARGC #define PETSC_HAVE_GFORTRAN_IARGC 1 #endif #ifndef PETSC_USE_PROC_FOR_SIZE #define PETSC_USE_PROC_FOR_SIZE 1 #endif #ifndef PETSC_MEMALIGN #define PETSC_MEMALIGN 16 #endif #ifndef PETSC_HAVE_SHARED_LIBRARIES #define PETSC_HAVE_SHARED_LIBRARIES 1 #endif #endif **** C specific Configure header /scratch/scratchdirs/madams/petsc-i5209_/conffix.h **** #if !defined(INCLUDED_UNKNOWN) #define INCLUDED_UNKNOWN #if defined(__cplusplus) extern "C" { } #else #endif #endif ******************************************************************************* UNABLE to CONFIGURE with GIVEN OPTIONS (see configure.log for details): ------------------------------------------------------------------------------- Error running make; make install on MPICH: Could not execute "cd /global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106 && /usr/bin/make -j 10 all": if test ! -h ./src/include/mpio.h ; then \ rm -f ./src/include/mpio.h ; \ ( cd ./src/include && \ ln -s ../mpi/romio/include/mpio.h ) ; \ fi make all-recursive make[1]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106' Making all in src/mpl make[2]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/src/mpl' CC mpltrmem.lo CC mplstr.lo CC mplenv.lo CCLD libmpl.la make[2]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/src/mpl' Making all in src/openpa make[2]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/src/openpa' Making all in src make[3]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/src/openpa/src' make all-am make[4]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/src/openpa/src' CC opa_primitives.lo CC opa_queue.lo CCLD libopa.la make[4]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/src/openpa/src' make[3]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/src/openpa/src' Making all in test make[3]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/src/openpa/test' make[3]: Nothing to be done for `all'. make[3]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/src/openpa/test' make[3]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/src/openpa' make[3]: Nothing to be done for `all-am'. make[3]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/src/openpa' make[2]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/src/openpa' Making all in src/mpi/romio make[2]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/src/mpi/romio' make[3]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/src/mpi/romio' CC mpi-io/close.lo CC mpi-io/delete.lo CC mpi-io/file_c2f.lo CC mpi-io/file_f2c.lo CC mpi-io/fsync.lo CC mpi-io/get_amode.lo CC mpi-io/get_atom.lo CC mpi-io/get_bytoff.lo CC mpi-io/get_extent.lo CC mpi-io/get_group.lo CC mpi-io/get_info.lo CC mpi-io/get_posn.lo CC mpi-io/get_posn_sh.lo CC mpi-io/get_size.lo CC mpi-io/get_view.lo CC mpi-io/iread.lo CC mpi-io/iread_at.lo CC mpi-io/iread_sh.lo CC mpi-io/iwrite.lo CC mpi-io/iwrite_at.lo CC mpi-io/iwrite_sh.lo CC mpi-io/open.lo CC mpi-io/prealloc.lo CC mpi-io/rd_atallb.lo CC mpi-io/rd_atalle.lo CC mpi-io/read.lo CC mpi-io/read_all.lo CC mpi-io/read_allb.lo CC mpi-io/read_alle.lo CC mpi-io/read_at.lo CC mpi-io/read_atall.lo CC mpi-io/read_ord.lo CC mpi-io/read_ordb.lo CC mpi-io/read_orde.lo CC mpi-io/read_sh.lo CC mpi-io/register_datarep.lo CC mpi-io/seek.lo CC mpi-io/seek_sh.lo CC mpi-io/set_atom.lo CC mpi-io/set_info.lo CC mpi-io/set_size.lo CC mpi-io/set_view.lo CC mpi-io/wr_atallb.lo CC mpi-io/wr_atalle.lo CC mpi-io/write.lo CC mpi-io/write_all.lo CC mpi-io/write_allb.lo CC mpi-io/write_alle.lo CC mpi-io/write_at.lo CC mpi-io/write_atall.lo CC mpi-io/write_ord.lo CC mpi-io/write_ordb.lo CC mpi-io/write_orde.lo CC mpi-io/write_sh.lo CC mpi-io/glue/mpich/mpio_file.lo CC mpi-io/glue/mpich/mpio_err.lo CC mpi-io/mpich_fileutil.lo CC mpi-io/mpir-mpioinit.lo CC mpi-io/mpiu_greq.lo CC mpi-io/mpiu_external32.lo CC adio/ad_nfs/ad_nfs_read.lo CC adio/ad_nfs/ad_nfs_open.lo CC adio/ad_nfs/ad_nfs_write.lo CC adio/ad_nfs/ad_nfs_done.lo CC adio/ad_nfs/ad_nfs_fcntl.lo CC adio/ad_nfs/ad_nfs_iread.lo CC adio/ad_nfs/ad_nfs_iwrite.lo CC adio/ad_nfs/ad_nfs_wait.lo CC adio/ad_nfs/ad_nfs_setsh.lo CC adio/ad_nfs/ad_nfs_getsh.lo CC adio/ad_nfs/ad_nfs.lo CC adio/ad_nfs/ad_nfs_resize.lo CC adio/ad_nfs/ad_nfs_features.lo CC adio/ad_testfs/ad_testfs_close.lo CC adio/ad_testfs/ad_testfs_read.lo CC adio/ad_testfs/ad_testfs_rdcoll.lo CC adio/ad_testfs/ad_testfs_wrcoll.lo CC adio/ad_testfs/ad_testfs_open.lo CC adio/ad_testfs/ad_testfs_write.lo CC adio/ad_testfs/ad_testfs_done.lo CC adio/ad_testfs/ad_testfs_fcntl.lo CC adio/ad_testfs/ad_testfs_iread.lo CC adio/ad_testfs/ad_testfs_iwrite.lo CC adio/ad_testfs/ad_testfs_wait.lo CC adio/ad_testfs/ad_testfs_flush.lo CC adio/ad_testfs/ad_testfs_seek.lo CC adio/ad_testfs/ad_testfs_resize.lo CC adio/ad_testfs/ad_testfs_hints.lo CC adio/ad_testfs/ad_testfs_delete.lo CC adio/ad_testfs/ad_testfs.lo CC adio/ad_ufs/ad_ufs.lo CC adio/ad_ufs/ad_ufs_open.lo CC adio/common/ad_aggregate.lo CC adio/common/ad_aggregate_new.lo CC adio/common/ad_close.lo CC adio/common/ad_coll_build_req_new.lo CC adio/common/ad_coll_exch_new.lo CC adio/common/ad_darray.lo CC adio/common/ad_delete.lo CC adio/common/ad_done.lo CC adio/common/ad_done_fake.lo CC adio/common/ad_end.lo CC adio/common/ad_fcntl.lo CC adio/common/ad_features.lo CC adio/common/ad_flush.lo CC adio/common/ad_fstype.lo CC adio/common/ad_get_sh_fp.lo CC adio/common/ad_hints.lo CC adio/common/ad_init.lo CC adio/common/ad_io_coll.lo CC adio/common/ad_iopen.lo CC adio/common/ad_iread.lo CC adio/common/ad_iread_fake.lo CC adio/common/ad_iwrite.lo CC adio/common/ad_iwrite_fake.lo CC adio/common/ad_open.lo CC adio/common/ad_opencoll.lo CC adio/common/ad_opencoll_failsafe.lo CC adio/common/ad_opencoll_scalable.lo CC adio/common/ad_prealloc.lo CC adio/common/ad_read.lo CC adio/common/ad_read_coll.lo CC adio/common/ad_read_str.lo CC adio/common/ad_read_str_naive.lo CC adio/common/ad_resize.lo CC adio/common/ad_seek.lo CC adio/common/ad_set_sh_fp.lo CC adio/common/ad_set_view.lo CC adio/common/ad_subarray.lo CC adio/common/ad_wait.lo CC adio/common/ad_wait_fake.lo CC adio/common/ad_write.lo CC adio/common/ad_write_coll.lo CC adio/common/ad_write_nolock.lo CC adio/common/ad_write_str.lo CC adio/common/ad_write_str_naive.lo CC adio/common/adi_close.lo CC adio/common/byte_offset.lo CC adio/common/cb_config_list.lo CC adio/common/eof_offset.lo CC adio/common/error.lo CC adio/common/flatten.lo CC adio/common/get_fp_posn.lo CC adio/common/greq_fns.lo CC adio/common/heap-sort.lo CC adio/common/iscontig.lo CC adio/common/lock.lo CC adio/common/malloc.lo CC adio/common/shfp_fname.lo CC adio/common/status_setb.lo CC adio/common/strfns.lo CC adio/common/system_hints.lo CCLD libromio.la make[3]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/src/mpi/romio' make[2]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/src/mpi/romio' Making all in src/pm/hydra make[2]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/src/pm/hydra' Making all in ../../mpl make[3]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/src/mpl' make[3]: Nothing to be done for `all'. make[3]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/src/mpl' Making all in tools/topo/hwloc/hwloc make[3]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/src/pm/hydra/tools/topo/hwloc/hwloc' Making all in src make[4]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/src/pm/hydra/tools/topo/hwloc/hwloc/src' CC topology.lo CC traversal.lo CC distances.lo CC components.lo CC bind.lo CC bitmap.lo CC misc.lo CC topology-noos.lo CC base64.lo CC topology-synthetic.lo CC topology-custom.lo CC topology-xml.lo CC topology-xml-nolibxml.lo CC topology-xml-libxml.lo CC topology-pci.lo CC topology-linux.lo CC topology-x86.lo CCLD libhwloc_embedded.la make[4]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/src/pm/hydra/tools/topo/hwloc/hwloc/src' Making all in include make[4]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/src/pm/hydra/tools/topo/hwloc/hwloc/include' make[4]: Nothing to be done for `all'. make[4]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/src/pm/hydra/tools/topo/hwloc/hwloc/include' make[4]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/src/pm/hydra/tools/topo/hwloc/hwloc' make[4]: Nothing to be done for `all-am'. make[4]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/src/pm/hydra/tools/topo/hwloc/hwloc' make[3]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/src/pm/hydra/tools/topo/hwloc/hwloc' Making all in . make[3]: Entering directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/src/pm/hydra' CC alloc.lo CC args.lo CC dbg.lo CC env.lo CC launch.lo CC signals.lo CC others.lo CC sock.lo CC string.lo CC topo.lo CC topo_hwloc.lo CC bsci_init.lo CC bsci_finalize.lo CC bsci_launch.lo CC bsci_query_node_list.lo CC bsci_query_proxy_id.lo CC bsci_query_native_int.lo CC bsci_wait.lo CC bsci_env.lo CC bscu_wait.lo CC bscu_cb.lo CC external_common.lo CC external_common_launch.lo CC fork_init.lo CC user_init.lo CC manual_init.lo CC rsh_init.lo CC rsh_env.lo CC ssh_init.lo CC ssh.lo CC ssh_env.lo CC ssh_finalize.lo CC slurm_init.lo CC slurm_launch.lo CC slurm_env.lo CC slurm_query_native_int.lo CC slurm_query_node_list.lo CC slurm_query_proxy_id.lo CC ll_init.lo CC ll_launch.lo CC ll_query_native_int.lo CC ll_query_node_list.lo CC ll_query_proxy_id.lo CC ll_env.lo CC lsf_init.lo CC lsf_query_native_int.lo CC lsf_query_node_list.lo CC lsf_env.lo CC sge_init.lo CC sge_query_native_int.lo CC sge_query_node_list.lo CC sge_env.lo CC pbs_init.lo CC pbs_query_native_int.lo CC pbs_query_node_list.lo CC cobalt_init.lo CC cobalt_query_native_int.lo CC cobalt_query_node_list.lo CC persist_init.lo CC persist_launch.lo CC persist_wait.lo CC ckpoint.lo CC demux.lo CC demux_poll.lo CC demux_select.lo CC debugger.lo CC hydt_ftb_dummy.lo CC uiu.lo CC pmiserv_pmi.lo CC pmiserv_pmi_v1.lo CC pmiserv_pmi_v2.lo CC pmiserv_pmci.lo CC pmiserv_cb.lo CC pmiserv_utils.lo CC common.lo CC pmi_v2_common.lo CC hydra_persist-persist_server.o CC hydra_nameserver-hydra_nameserver.o CC hydra_pmi_proxy-pmip.o CC hydra_pmi_proxy-pmip_cb.o CC hydra_pmi_proxy-pmip_utils.o CC hydra_pmi_proxy-pmip_pmi_v1.o CC hydra_pmi_proxy-pmip_pmi_v2.o CC hydra_pmi_proxy-common.o CC hydra_pmi_proxy-pmi_v2_common.o CC mpiexec.o CC utils.o CCLD libhydra.la CCLD hydra_persist CCLD hydra_nameserver CCLD libpm.la CCLD hydra_pmi_proxy make[3]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/src/pm/hydra' make[2]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/src/pm/hydra' make[1]: Leaving directory `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106' ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded src/mpltrmem.c: In function 'MPL_trdump': src/mpltrmem.c:577:14: warning: variable 'old_head' set but not used [-Wunused-but-set-variable] TRSPACE *old_head; ^ ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded mpi-io/mpiu_external32.c: In function 'MPIU_datatype_full_size': mpi-io/mpiu_external32.c:123:14: warning: unused variable 'extent' [-Wunused-variable] MPI_Aint extent = 0; ^ ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded adio/common/ad_coll_build_req_new.c: In function 'ADIOI_Build_client_reqs': adio/common/ad_coll_build_req_new.c:905:9: warning: unused variable 'cb_node_ct' [-Wunused-variable] int cb_node_ct = fd->hints->cb_nodes; ^ ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded distances.c: In function 'hwloc__groups_by_distances': distances.c:853:34: warning: variable 'res_obj' set but not used [-Wunused-but-set-variable] hwloc_obj_t group_obj, res_obj; ^ ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded topology-xml.c: In function 'hwloc_export_obj_userdata_base64': topology-xml.c:1046:7: warning: variable 'ret' set but not used [-Wunused-but-set-variable] int ret; ^ ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded topology-linux.c: In function 'look_sysfsnode': topology-linux.c:2655:29: warning: variable 'res_obj' set but not used [-Wunused-but-set-variable] hwloc_obj_t node, res_obj; ^ ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ./utils/string/string.c: In function 'HYDU_strsplit': ./utils/string/string.c:92:9: warning: zero-length gnu_printf format string [-Wformat-zero-length] HYDU_ERR_SETANDJUMP(status, HYD_INTERNAL_ERROR, ""); ^ ./utils/args/args.c: In function 'match_arg': ./utils/args/args.c:148:21: warning: zero-length gnu_printf format string [-Wformat-zero-length] HYDU_ERR_SETANDJUMP(status, HYD_GRACEFUL_ABORT, ""); ^ ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ./tools/topo/hwloc/topo_hwloc.c: In function 'split_count_field': ./tools/topo/hwloc/topo_hwloc.c:219:3: warning: label 'fn_fail' defined but not used [-Wunused-label] fn_fail: ^ ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ./tools/bootstrap/external/slurm_query_native_int.c: In function 'HYDT_bscd_slurm_query_native_int': ./tools/bootstrap/external/slurm_query_native_int.c:30:3: warning: label 'fn_fail' defined but not used [-Wunused-label] fn_fail: ^ ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ./tools/bootstrap/external/ll_query_native_int.c: In function 'HYDT_bscd_ll_query_native_int': ./tools/bootstrap/external/ll_query_native_int.c:28:3: warning: label 'fn_fail' defined but not used [-Wunused-label] fn_fail: ^ ./tools/bootstrap/external/ll_query_node_list.c: In function 'process_mfile_count': ./tools/bootstrap/external/ll_query_node_list.c:51:3: warning: label 'fn_fail' defined but not used [-Wunused-label] fn_fail: ^ ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ./tools/bootstrap/external/lsf_query_native_int.c: In function 'HYDT_bscd_lsf_query_native_int': ./tools/bootstrap/external/lsf_query_native_int.c:28:3: warning: label 'fn_fail' defined but not used [-Wunused-label] fn_fail: ^ ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ./tools/bootstrap/external/sge_query_native_int.c: In function 'HYDT_bscd_sge_query_native_int': ./tools/bootstrap/external/sge_query_native_int.c:30:3: warning: label 'fn_fail' defined but not used [-Wunused-label] fn_fail: ^ ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ./tools/bootstrap/external/pbs_query_native_int.c: In function 'HYDT_bscd_pbs_query_native_int': ./tools/bootstrap/external/pbs_query_native_int.c:26:3: warning: label 'fn_fail' defined but not used [-Wunused-label] fn_fail: ^ ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ./tools/bootstrap/external/cobalt_query_native_int.c: In function 'HYDT_bscd_cobalt_query_native_int': ./tools/bootstrap/external/cobalt_query_native_int.c:26:3: warning: label 'fn_fail' defined but not used [-Wunused-label] fn_fail: ^ ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ./tools/ckpoint/ckpoint.c: In function 'ckpoint_thread': ./tools/ckpoint/ckpoint.c:84:3: warning: label 'fn_fail' defined but not used [-Wunused-label] fn_fail: ^ ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ./pm/pmiserv/pmiserv_pmi.c: In function 'HYD_pmcd_pmi_free_publish': ./pm/pmiserv/pmiserv_pmi.c:59:3: warning: label 'fn_fail' defined but not used [-Wunused-label] fn_fail: ^ ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ./pm/pmiserv/pmiserv_utils.c: In function 'pmi_process_mapping': ./pm/pmiserv/pmiserv_utils.c:205:3: warning: label 'create_mapping_key' defined but not used [-Wunused-label] create_mapping_key: ^ ./pm/pmiserv/pmiserv_utils.c: In function 'HYD_pmcd_pmi_free_pg_scratch': ./pm/pmiserv/pmiserv_utils.c:594:3: warning: label 'fn_fail' defined but not used [-Wunused-label] fn_fail: ^ ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ./pm/pmiserv/pmip_cb.c: In function 'parse_exec_params': ./pm/pmiserv/pmip_cb.c:811:9: warning: null argument where non-null required (argument 1) [-Wnonnull] HYD_pmcd_pmip.user_global.ckpointlib = HYDU_strdup(HYDRA_DEFAULT_CKPOINTLIB); ^ ./pm/pmiserv/pmip_cb.c:811:9: warning: null argument where non-null required (argument 2) [-Wnonnull] ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ./pm/pmiserv/pmip_utils.c: In function 'global_env_fn': ./pm/pmiserv/pmip_utils.c:358:3: warning: label 'fn_fail' defined but not used [-Wunused-label] fn_fail: ^ ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ./ui/mpich/utils.c: In function 'help_fn': ./ui/mpich/utils.c:158:5: warning: zero-length gnu_printf format string [-Wformat-zero-length] HYDU_ERR_SETANDJUMP(status, HYD_GRACEFUL_ABORT, ""); ^ ./ui/mpich/utils.c: In function 'info_fn': ./ui/mpich/utils.c:1240:5: warning: zero-length gnu_printf format string [-Wformat-zero-length] HYDU_ERR_SETANDJUMP(status, HYD_GRACEFUL_ABORT, ""); ^ ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded /usr/bin/ld: attempted static link of dynamic object `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/src/mpl/.libs/libmpl.so' collect2: error: ld returned 1 exit status ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded /usr/bin/ld: attempted static link of dynamic object `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/src/mpl/.libs/libmpl.so' collect2: error: ld returned 1 exit status make[3]: *** [hydra_nameserver] Error 1 make[3]: *** Waiting for unfinished jobs.... make[3]: *** [hydra_persist] Error 1 ModuleCmd_Switch.c(172):ERROR:152: Module 'PrgEnv-pgi' is currently not loaded /usr/bin/ld: attempted static link of dynamic object `/global/u2/m/madams/petsc_maint/externalpackages/mpich-3.0.4-106/src/mpl/.libs/libmpl.so' collect2: error: ld returned 1 exit status make[3]: *** [hydra_pmi_proxy] Error 1 make[2]: *** [all-recursive] Error 1 make[1]: *** [all-recursive] Error 1 make: *** [all] Error 2 ******************************************************************************* File "/global/u2/m/madams/petsc_maint/config/configure.py", line 287, in petsc_configure framework.configure(out = sys.stdout) File "/global/u2/m/madams/petsc_maint/config/BuildSystem/config/framework.py", line 933, in configure child.configure() File "/global/u2/m/madams/petsc_maint/config/BuildSystem/config/package.py", line 558, in configure self.executeTest(self.configureLibrary) File "/global/u2/m/madams/petsc_maint/config/BuildSystem/config/base.py", line 115, in executeTest ret = apply(test, args,kargs) File "/global/u2/m/madams/petsc_maint/config/BuildSystem/config/packages/MPI.py", line 748, in configureLibrary config.package.Package.configureLibrary(self) File "/global/u2/m/madams/petsc_maint/config/BuildSystem/config/package.py", line 486, in configureLibrary for location, directory, lib, incl in self.generateGuesses(): File "/global/u2/m/madams/petsc_maint/config/BuildSystem/config/package.py", line 232, in generateGuesses d = self.checkDownload(1) File "/global/u2/m/madams/petsc_maint/config/BuildSystem/config/packages/MPI.py", line 351, in checkDownload return config.package.Package.checkDownload(self, requireDownload) File "/global/u2/m/madams/petsc_maint/config/BuildSystem/config/package.py", line 340, in checkDownload return self.getInstallDir() File "/global/u2/m/madams/petsc_maint/config/BuildSystem/config/package.py", line 187, in getInstallDir return os.path.abspath(self.Install()) File "/global/u2/m/madams/petsc_maint/config/BuildSystem/config/packages/MPI.py", line 366, in Install return self.InstallMPICH() File "/global/u2/m/madams/petsc_maint/config/BuildSystem/config/packages/MPI.py", line 573, in InstallMPICH raise RuntimeError('Error running make; make install on MPICH: '+str(e))