<html><body><div style="color:#000; background-color:#fff; font-family:HelveticaNeue, Helvetica Neue, Helvetica, Arial, Lucida Grande, sans-serif;font-size:12pt"><span><div><span>Sourcing the .csh files of the compiler fixed the problem. Thanks! However, later it got another error (the attached configure.log was shortened since it was too big to be sent by email, it should contain the error message, though):</span></div><div><span></span> </div><div><span>*******************************************************************************<br clear="none"> UNABLE to CONFIGURE with GIVEN OPTIONS (see configure.log for details):<br clear="none">-------------------------------------------------------------------------------<br clear="none">Fortran error! mpi_init() could not be located!<br clear="none">*******************************************************************************<br clear="none"></span></div><div><span>It seems the configure did
not link the Intel MPI libs. I used --with-mpi-dir to specify the MPI directory, can configure get the correct Intel MPI lib names? If I have to specify the lib names (using --with-mpi-lib?), which libs should I specify? I saw a lot of libs under the directory, such as libmpi.a, libmpi_ipl64.a, libmpi_mt.a, etc. </span></div><div><span></span> </div><div><span>Thanks a lot,</span></div><div><span>Qin</span></div></span><div></div><div><br></div> <div style="font-family: HelveticaNeue, Helvetica Neue, Helvetica, Arial, Lucida Grande, sans-serif; font-size: 12pt;"> <div style="font-family: HelveticaNeue, Helvetica Neue, Helvetica, Arial, Lucida Grande, sans-serif; font-size: 12pt;"> <div dir="ltr"> <div style="margin: 5px 0px; padding: 0px; border: 1px solid rgb(204, 204, 204); height: 0px; line-height: 0; font-size: 0px;" class="hr" contentEditable="false" readonly="true"></div> <font size="2" face="Arial"> <b><span style="font-weight:
bold;">From:</span></b> Barry Smith <bsmith@mcs.anl.gov><br> <b><span style="font-weight: bold;">To:</span></b> Qin Lu <lu_qin_2000@yahoo.com> <br><b><span style="font-weight: bold;">Cc:</span></b> petsc-users <petsc-users@mcs.anl.gov> <br> <b><span style="font-weight: bold;">Sent:</span></b> Friday, March 21, 2014 10:11 AM<br> <b><span style="font-weight: bold;">Subject:</span></b> Re: [petsc-users] Building PETSc with Intel mpi<br> </font> </div> <div class="y_msg_container"><br><br clear="none"> Did you follow the directions here: <a href="http://www.mcs.anl.gov/petsc/documentation/faq.html#libimf" shape="rect" target="_blank">http://www.mcs.anl.gov/petsc/documentation/faq.html#libimf</a><br clear="none"><br clear="none"> Did it make any difference?<br clear="none"><br clear="none"><br clear="none">On Mar 21, 2014, at 9:45 AM, Qin Lu <<a href="mailto:lu_qin_2000@yahoo.com" shape="rect"
ymailto="mailto:lu_qin_2000@yahoo.com">lu_qin_2000@yahoo.com</a>> wrote:<br clear="none"><br clear="none">> Hello,<br clear="none">> <br clear="none">> I was trying to build PETSc-3.4.2 with Intel MPI using Intel-2013 compilers in Linux, but got the error below. The configure.log is attached.<br clear="none">> <br clear="none">> *******************************************************************************<br clear="none">> UNABLE to EXECUTE BINARIES for ./configure <br clear="none">> -------------------------------------------------------------------------------<br clear="none">> Cannot run executables created with FC. If this machine uses a batch system <br clear="none">> to submit jobs you will need to configure using ./configure with the additional option --with-batch.<br clear="none">> Otherwise there is problem with the
compilers. Can you compile and run code with your C/C++ (and maybe Fortran) compilers?<br clear="none">> See <a href="http://www.mcs.anl.gov/petsc/documentation/faq.html#libimf" shape="rect" target="_blank">http://www.mcs.anl.gov/petsc/documentation/faq.html#libimf</a><br clear="none">> *******************************************************************************<br clear="none">> <br clear="none">> Thanks a lot for any suggestions abut the problem,<br clear="none">> <br clear="none">> Regards,<br clear="none">> Qin<div id="yqtfd71462" class="yqt3440673926"><br clear="none">> <br clear="none">> <configure.log><br clear="none"></div><br><br></div> </div> </div> </div></body></html>